To examine more information about this dataset, click here.
There are two or more file that can be downloaded for this dataset. For the page that lists them, click here
Measure | Description | More Info |
---|---|---|
Cal. FC | Calibrated fold change. | here |
LP Detection | P = present (detected), A = absent(not detected) | here |
LP Intensity | Log phase Smax (second maximal probe pair (PM-MM), as described in the paper) averaged from duplicate arrays | here |
LP sdev | Standard deviation of Log Phase Smax. | here |
Length (bases) | Length of RNA in bases. | here |
RNA type | CDS = coding sequence, rRNA = ribosomal RNA, tRNA = transfer RNA, misc_RNA = miscellaneous RNA. | here |
SP Detection | P = present(detected), A = absent (not detected). | here |
SP FC sig | Stationary phase fold change significance. | here |
SP Intensity | Stationary phase Smax, averaged from duplicate arrays | here |
SP abs change | Absolute change of Smax between log and stationary phase. | here |
SP call | Decision of whether the change in Smax was significant between log and stationary phase. | here |
SP fold change | Fold change of Smax between log and stationary phase. | here |
SP sdev | Standard Deviation of Stationary Phase Smax | here |
SP t-test | Stationary phase t-statistic testing the null hypothesis that the mean Smaxes (Given in the LP Intensity and SP Intensity fields) are the same | here |
gDNA Detection | Absolute change of Smax between log phase and genomic DNA. | here |
gDNA FC sig | Genomic DNA fold change significance. | here |
gDNA Intensity | Smax of genomic DNA hybridization. Genomic data is from a single chip. | here |
gDNA abs change | Absolute change of Smax between log and stationary phase. | here |
gDNA call | Decision of whether the change in Smax was significant between log phase and genomic DNA. | here |
gDNA fold change | Fold change of Smax between log and stationary phase. | here |
gDNA sdev | Standard Deviation of genomic DNA Smax. | here |
gDNA t-test | Stationary phase t-statistic testing the null hypothesis that the mean Smaxs (Given in the LP Intensity and Genomic DNA Intensity fields) are the same. | here |
rev_comp_RNA Detection | rev_comp_RNA Detection | here |
rev_comp_RNA Intensity | rev_comp_RNA Intensity | here |
rev_comp_cDNA Detection | rev_comp_cDNA Detection | here |
rev_comp_cDNA Intensity | rev_comp_cDNA Intensity | here |
Please contact Wayne Rindone for more information, or with any questions, comments, or concerns.
Copyright (c) 2006 by Wayne Rindone and the President and Fellows of Harvard University