| Information Item | Value |
|---|---|
| Dataset Name | Der_diaux: diauxic shift data |
| Dataset Number | 5 |
| Short Description | expression levels during metabolic shift from fermentation to respiration |
| Source URL | http://cmgm.stanford.edu/pbrown/ |
| Reference | Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale, Joseph L. DeRisi, Vishwanath R. Iyer, and Patrick O. Brown, Science 1997 October 24; 278: 680-686 |
| Strains | DBY7286 (MATa, ura3, GAL2) |
| Conditions | 7 timepoints in diauxic shift (plus 7 identical t=0 datasets) MATa ura3, GAL2 YPD (EtOH) t=0,9.5,12,13,15,17,18.5 hr 19,18.7,17.6,14,7.5,0.2,0 g/l Glucose 5.0E6, 1.3E7, 2.2E7, 4.9E7, 1.0E8, 1.9E8, 2.0E8 cells/ml OD600= 0.14, 0.46, 0.8, 1.8, 3.7, 6.9, 7.3 |
| Date Added to ExpressDB | Feb 5 1999 12:12:36:573PM |
| Number of Measures on ExpressDB | 63 (here to download dataset and view measure details) |
| Long Description | Article abstract - DNA microarrays containing virtually every gene of Saccharomyces cerevisiae were used to carry out a comprehensive investigation of the temporal program of gene expression accompanying the metabolic shift from fermentation to respiration. The expression profiles observed for genes with known metabolic functions pointed to features of the metabolic reprogramming that occur during the diauxic shift, and the expression patterns of many previously uncharacterized genes provided clues to their possible functions. The same DNA microarrays were also used to identify genes whose expression was affected by deletion of the transcriptional co-repressor TUP1 or overexpression of the transcriptional activator YAP1. These results demonstrate the feasibility and utility of this approach to genomewide exploration of gene expression patterns. |
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