ExpressDB includes a collection of E coli RNA expression datasets created at the Church Labs and at other laboratories prior to 2002.
The page link shown in the Downloads column for these data sets is a link to a page from which you can download data files and information files associated with that data set. The here links in the More Info column are links to pages that provide a lot more information about each data set, including citations and in some cases links to web pages provided by the citation authors
For historical information: general information about ExpressDB
|Data Set||Description||Downloads||More Info|
|Affymetrix data for EvgA overexpression.||Effect of the overexpression of EvgA response regulator.||page||here|
|Affymetrix chips for chloramphenicol induction||Affymetrix Expression Experiments showing effect of induction by chloramphenicol.||page||here|
|Affymetrix chips for novobiocin and NaCl Induction||Affymetrix Expression Experiments showing effect of induction by novobiocin and/or NaCl.||page||here|
|Affymetrix chips for pefloxacin induction||Affymetrix Expression Experiments showing effect of induction by pefloxacin.||page||here|
|Affymetrix ratios for study of acid resistance gene regulatory network||Three comparisons, each performed twice.||page||here|
|Selinger et al, Affymetrix RNA decay data||Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation||page||here|
|Selinger et al, Affymetrix stationary vs. log phase||RNA Expression Analysis Using a 30 Base Pair Resolution Escherichia coli Genome Array||page||here|
Please contact Wayne Rindone for more information, or with any questions, comments, or concerns.
Copyright (c) 2006 by Wayne Rindone and the President and Fellows of Harvard University