Motif Search v1.1 April 7, 1998 by Jason D. Hughes

Motif:
aactgtatataaatacagtt	1	1	1	-1.70168
tattggctgtttatacagta	2	1	1	-9.0968
tcctgttaatccatacagca	3	1	1	-7.06902
acctgtataaataaccagta	4	1	1	-3.77694
tgctgtatatactcacagca	5	1	1	-4.94336
aactgtatatacacccaggg	6	1	1	-5.0581
gactgtataaaaccacagcc	7	1	1	-9.02354
tactgtatgagcatacagta	8	1	1	-4.85005
tactgtatataaaaccagtt	9	1	1	-1.55488
tactgtacacaataacagta	10	1	1	-6.43143
TCCTGTATGAAAAACCATTA	11	1	1	-7.18282
cgctggatatctatccagca	12	1	1	-6.66438
tactgatgatatatacaggt	13	1	1	-8.07842
cactggatagataaccagca	14	1	1	-6.28173
tactgtacatccatacagta	15	1	1	-3.24062
tactgtatataaaaacagta	16	1	1	-0.52259
tactgtatattcattcaggt	17	1	1	-5.28157
aactgtttttttatccagta	18	1	1	-6.04533
atctgtatatatacccagct	19	1	1	-5.1939
********************
Average: -5.36827	Std. Dev.: 2.40376

Sites scoring better than avg-2*sdev:
TACTGTTTATCTTCCCAGCG	1	50435	1	-8.20647
GACTGTATAAAACCACAGCC	1	65834	0	-9.02354
TGCTGTATATTTATTCAGCT	1	246517	1	-6.20583
AGCTGAATAAATATACAGCA	1	246517	0	-6.33756
CACTGTATACTTTACCAGTG	1	250864	1	-9.59438
TACCGTTTGTATTTCCAGCT	1	256144	1	-10.0386
AACGGTATTGAAAAACAGCA	1	415725	0	-9.93592
TACTGTTTGTGCAAATAGTA	1	561600	1	-9.28257
TACTATTTGCACAAACAGTA	1	561600	0	-9.35953
CACTGTATAAATAAACAGCT	1	606863	1	-4.30471
AGCTGTTTATTTATACAGTG	1	606863	0	-7.3053
AACTGAATAAAAACAAAGGA	1	655810	0	-9.82408
AACTGATTAAAAACCCAGCG	1	711238	0	-9.36112
AACTGTTTTTTTATCCAGTA	1	812655	1	-6.04533
TACTGGATAAAAAAACAGTT	1	812655	0	-3.93026
TATTGGCTGTTTATACAGTA	1	832259	1	-9.0968
TACTGTATAAACAGCCAATA	1	832259	0	-8.00838
TCCTGTTAATCCATACAGCA	1	932351	1	-7.06902
TGCTGTATGGATTAACAGGA	1	932351	0	-8.73687
TACTGTATGGATGTACAGTA	1	1020165	1	-7.18181
TACTGTACATCCATACAGTA	1	1020165	0	-3.24062
AAGTGTATTTACACACAGCG	1	1069356	1	-10.174
TACTGGTTATTTATACAGGT	1	1120730	1	-6.16871
ACCTGTATAAATAACCAGTA	1	1120730	0	-3.77694
ACCTGTTTAAATATCCAGTA	1	1225561	1	-4.88552
TACTGGATATTTAAACAGGT	1	1225561	0	-5.06013
TGCTGTTTATTAAACCAGAA	1	1227426	1	-8.22586
TTCTGGTTTAATAAACAGCA	1	1227426	0	-9.46643
TACTGTATATAAAAACAGTA	1	1229951	1	-0.52259
TACTGTTTTTATATACAGTA	1	1229951	0	-3.82345
AACGGTATGATTATCCAGTT	1	1354631	1	-9.29311
AACTGGATAATCATACCGTT	1	1354631	0	-9.2249
ACCTGAATATTCAAACAGCG	1	1436358	1	-8.81829
GGCTTTATATTTACCCAGCA	1	1441076	0	-10.0979
TTCTGGTCGTAAATCCAGCA	1	1498280	1	-9.31999
AATTGTTTAAAAAACCAGAA	1	1500573	0	-9.61502
AACTCTATATTACCCCAGTT	1	1585354	0	-9.99463
TACTGTTTATAAACCGAGCG	1	1599556	0	-8.8531
AACTGTAAATAATTACATGA	1	1649922	1	-8.71406
CACTGGTTTTCCACCCAGCA	1	1699203	1	-9.69175
GCCTGTCTGAACAAACAGTA	1	1714678	0	-8.83146
TACTGTACGTATCGACAGTT	1	1808201	1	-9.47594
AACTGTCGATACGTACAGTA	1	1808201	0	-9.04796
CACTGGATAGATAACCAGCA	1	1821506	1	-6.28173
TGCTGGTTATCTATCCAGTG	1	1821506	0	-8.26709
AACTGTGATTTTATACAGTA	1	1928789	1	-10.1153
TACTGTATAAAATCACAGTT	1	1928789	0	-4.69698
TGCTGGATAGATATCCAGCG	1	1944050	1	-8.18285
CGCTGGATATCTATCCAGCA	1	1944050	0	-6.66438
TATTGTATATATTCACATTA	1	1956366	0	-7.6589
TACTCTCTGTTCATCCAGCA	1	1975302	1	-9.59396
TTCTGTCTGGAAACCCAGCA	1	1979073	1	-9.7991
AACTGGTTGAAAAACCATCA	1	2031049	0	-10.0262
TCTTGTATATCCAACCAGTT	1	2042060	0	-6.69008
TACTGTTTTTATATACAGTA	1	2079299	1	-3.82345
TACTGTATATAAAAACAGTA	1	2079299	0	-0.52259
TTCTGCATAGCTATCCAGTT	1	2096979	1	-10.1337
TGCTGTACAATCAGCCAGCA	1	2109408	1	-9.66095
AACTGGATAAAATTACAGGG	1	2194467	1	-8.57333
CCCTGTAATTTTATCCAGTT	1	2194467	0	-9.85199
TACTGTATATAAAACCAGTT	1	2749748	1	-1.55488
AACTGGTTTTATATACAGTA	1	2749748	0	-6.04913
TACTGTACACAATAACAGTA	1	2749770	1	-6.43143
TCCTGTATGAAAAACCATTA	1	2749788	0	-7.18282
CCCTGTATTTCAATGCAGCA	1	2774696	1	-10.1515
TACTGTATGCTCATACAGTA	1	2821852	1	-5.10137
TACTGTATGAGCATACAGTA	1	2821852	0	-4.85005
AACTGTTTATCAACACCGCT	1	2851701	1	-9.35307
AACTGTATTTACAATCATCT	1	3001947	0	-9.35433
TCCTGTATAAATTAACCGTT	1	3119011	0	-9.19964
CTCTGGACATTAAACCAGGA	1	3210458	1	-10.1414
CATTGTTTATAAAAACAGCA	1	3213164	1	-6.5286
ACCAGAATAAACATCCAGTA	1	3250010	0	-9.53948
TGCTGGATGTGAAACCAGCG	1	3474304	0	-10.1166
TGCTGAACATTCTTCCAGCA	1	3628726	1	-9.84034
AATTGTAAAAAACAACAGCA	1	3632258	1	-10.084
AACTGGATAATCATACAGTA	1	3645610	1	-4.74035
TACTGTATGATTATCCAGTT	1	3645610	0	-4.89194
TGCAGGTTATAAAACCAGCA	1	3645632	1	-9.53959
TACTGTAAGAAAAACCCGCA	1	3653648	0	-9.7991
TACTGTTTCTTCATGCAGCA	1	3653734	1	-9.86223
TACTGTTTATTAATGTAGCA	1	3663468	1	-10.0918
AGCTGTATTTGTCTCCAGTA	1	3719239	1	-9.48884
TACTGGAGACAAATACAGCT	1	3719239	0	-7.46433
TATTGTATTTATAAACATTA	1	3742010	1	-7.73948
TAATGTTTATAAATACAATA	1	3742010	0	-8.85301
TAATGAATATAAAACCAGGA	1	3743632	0	-7.7788
AACTGTATATAAATACAGTT	1	3815324	1	-1.70168
AACTGTATTTATATACAGTT	1	3815324	0	-3.89395
TACTGTTTATTTATACAGTA	1	3850926	1	-2.76104
TACTGTATAAATAAACAGTA	1	3850926	0	-1.4781
TTCTGGTTGTATATGCAGTA	1	3873694	1	-9.70598
TACTGCATATACAACCAGAA	1	3873694	0	-7.21241
ATCTGTATATATACCCAGCT	1	3995520	1	-5.1939
TGCTGTACAAACGTCCAGTT	1	4014857	0	-9.28146
GTCTGAATGAATACCCAGTA	1	4239820	0	-10.1147
TGCTGTATATACTCACAGCA	1	4254647	1	-4.94336
TGCTGTGAGTATATACAGCA	1	4254647	0	-9.42341
AACTGTATATACACCCAGGG	1	4254668	1	-5.0581
CCCTGGGTGTATATACAGTT	1	4254668	0	-10.1071
ACCTGAATGAATATACAGTA	1	4271534	1	-7.00959
TACTGTATATTCATTCAGGT	1	4271534	0	-5.28157
TGCTGATTAAAAAACCAGCG	1	4348031	1	-9.9422
AAGTGTATATATATCCATCG	1	4538714	1	-9.67197
TACTGAATAAAAAAGCAGAA	1	4575786	0	-10.0456
ACCTGTATATATCATCAGTA	1	4577486	1	-6.81082
TACTGATGATATATACAGGT	1	4577486	0	-8.07842
CACTGAATGCTAAAACAGCA	1	4632943	0	-9.82186
********************
Average: -35.3941	Std. Dev.: 5.58932