Motif Search v1.1 April 7, 1998 by Jason D. Hughes

Motif:
tacctcaatagcggta	1	1	1	-2.56495
tgctcctttataggta	2	1	1	-4.77404
taactctttccgggta	3	1	1	-3.08627
tacatcggtaagggta	4	1	1	-4.68394
ttactcactatgggta	5	1	1	-2.39662
gtattccccatgggta	6	1	1	-6.68742
ttatcctaaaggggta	7	1	1	-1.86531
tcactcgaaagtagta	8	1	1	-5.33057
taccccgatcggggta	9	1	1	-2.46487
tactccttaatgggta	10	1	1	-2.06599
taactctaaagtggta	11	1	1	-1.46634
****************
Average: -3.39876	Std. Dev.: 1.69179

Sites scoring better than avg-2*sdev:
TGATTCGTGCGGGGTA	1	17431	1	-6.63798
TAACCCGGAAGGGGGA	1	26681	1	-5.76531
TAACTCATAATGGGTA	1	42038	1	-1.80884
TATTTCTACCGGGGTA	1	78661	1	-5.73401
TAAACCGATGGTGGTA	1	92339	1	-6.4722
TACCGCGTACTGGGTA	1	125477	1	-5.68247
TCCCTGTGTATGGGTA	1	133922	1	-6.26884
TAAATCAAACCTGGTA	1	145508	1	-6.35542
TACCTGGATACAGGTA	1	150713	0	-6.66325
TACCTCAAAATGAGTC	1	184101	1	-6.60531
TAATACGCAAGCGGTA	1	214091	0	-6.29338
TTCTTCTGCATTGGTA	1	219825	1	-5.21872
TTACTCTTTAGGAGGA	1	228017	0	-6.15243
CTCTCCACTATGGGTA	1	233579	1	-6.48675
AAAATCTCTATTGGTA	1	242079	0	-6.5986
TGCTCCTTAACGGGTA	1	260706	0	-4.63093
GAACTCAATCTGGGTA	1	268524	0	-4.27004
GAAATCGCTAGCGGTA	1	268662	0	-6.26213
GTATTCTAAAGGGGAA	1	301810	1	-6.43589
TACGTCGAAATAGGTA	1	313227	0	-5.36182
TAGCTCTGAATAGGTA	1	320556	1	-6.04207
TAACCCTATTCCGGTA	1	332302	1	-6.36399
TATCTCTGAATGGGTA	1	332650	1	-4.43263
TGCCTCAGAAGTGGTA	1	342719	0	-5.18747
TAATTCGTCGGTGGTA	1	348565	0	-6.78108
TTCTCCTTTATTGGTA	1	349672	1	-3.41591
TCCATCGATAACGGTA	1	393481	1	-6.46043
TTAATCGCACGCGGTA	1	420904	0	-6.63798
TACATCGACAGGGATA	1	446740	0	-6.68721
TTATTCGTTAGTGGCA	1	485617	0	-6.12484
TGCTTCGCCCTGGGTA	1	509506	1	-6.24357
GGCCCCGACAGGGGTA	1	523346	1	-6.00845
TGATCCATTAGGGTTA	1	527439	1	-6.72082
TTCGCCGCTACGGGTA	1	557477	1	-6.40159
TTAATCATTATGGATA	1	563535	0	-6.66198
TAAACCGGCAAGGGTA	1	621209	1	-6.49405
TCAGTCTTTAAGGGTA	1	641266	0	-5.78255
TACATCCTAAGGAGTA	1	651214	1	-5.69829
TGACCCTTTCCCGGTA	1	651865	0	-6.67287
TGCATCTACATGAGTA	1	660318	0	-6.71265
TCACCAGTAATGGGTA	1	677541	0	-6.58502
GAACTCGCCATTGGTA	1	682589	0	-5.95197
TAACTCAAAAGCGGTT	1	691804	0	-5.90111
TCAGCCCTTAGGGGTA	1	694263	1	-6.29338
TAATCCACTCATGGTA	1	724191	1	-6.18836
TAATTCAATCATGGTA	1	735304	1	-4.88908
TACCTCACAAAGGTTA	1	794222	1	-6.54647
TTGTCCGATAGTGGTA	1	797708	0	-5.61314
TAAATCGACATGGGAA	1	848880	1	-6.72082
TACCCGGCTACGGGTA	1	851776	1	-6.3531
TAACTATCAACTGGTA	1	872291	1	-6.68957
TTACCGGATAGAGGTA	1	874984	0	-6.32678
TACACCGATACTGGTA	1	875766	0	-4.9941
TACCCCGGCAAGGGTA	1	886750	0	-5.19477
TACCTCTCTGGCGGTA	1	913165	0	-5.50939
TAATCCTTTAGGCGTA	1	915484	1	-4.37506
TAACTGACAATGGGTA	1	922127	1	-5.2808
TCACTCGAAAGTAGTA	1	940036	0	-5.33057
TTCCTCTCTGGTGGTA	1	949150	1	-5.6176
TAATTAGATATGGGTA	1	1004989	0	-4.15587
GCCTTCATTACGGGTA	1	1010020	0	-6.48675
TTATTCTTAAGGGGCA	1	1020271	0	-4.94197
TAACCCGATAATGGTA	1	1036918	0	-3.36071
TACCCCTATATTGGTC	1	1044630	0	-5.11266
TCACTCAGGAGGGGTA	1	1057098	0	-6.11903
TAATTCTACAGGGGTT	1	1057288	1	-4.96956
TAATTCCATAGCGTTA	1	1062990	1	-6.41194
TGTCTCTGTATTGGTA	1	1064577	1	-6.62985
GACCTCCGTCTGGGTA	1	1067284	0	-6.2472
CAGCCCTAAATGGGTA	1	1102525	1	-6.68869
TAACCCGACAGGGATA	1	1108196	0	-5.56464
AAACCCGAAACTGGTA	1	1114051	0	-6.77295
GAAATCCTTCTGGGTA	1	1116338	1	-6.69919
TTCGCCACAATGGGTA	1	1124267	0	-6.00718
TGCTCCCATCGCGGTA	1	1133042	0	-6.75566
TTCTTCATCCGGGGTA	1	1185573	0	-5.1956
TTAACCGTAAAAGGTA	1	1220120	1	-6.77662
CACTTCATTAGCGGTA	1	1234547	0	-6.42918
TAAGTCAGCATGGGTA	1	1254732	1	-6.3197
TTATCCTCGCGGGGTA	1	1266065	1	-6.186
TACCCCAGTAACGGTA	1	1266523	0	-5.67434
TTATTCTTTAAGGCTA	1	1272957	1	-5.87353
TAACTCTTTCCGGGTA	1	1276944	0	-3.08627
TACATCGGTAAGGGTA	1	1276989	1	-4.68394
GTACTCACTATGGGTA	1	1277053	1	-4.34253
GTATTCCCCATGGGTA	1	1278819	0	-6.68742
TTATCCTAAAGGGGTA	1	1278929	1	-1.86531
AACCCCACCAGGGGTA	1	1286543	1	-6.76565
TTACTCAATAGTGGCA	1	1289429	0	-5.6416
GAATCCGGCATGGGTA	1	1297164	0	-6.24274
CGATTCTTTATTGGTA	1	1298949	1	-6.62985
TACTCCAATGTAGGTA	1	1311989	1	-6.58861
TCATTAAAAATGGGTA	1	1333499	0	-6.32641
TTACTCGATATTCGTA	1	1351631	0	-5.41483
AACCCCGCAAGGGGTA	1	1357498	1	-5.33057
TTGCCCTGAATGGGTA	1	1407127	0	-5.56249
GGACTCTTAAAGGGTA	1	1407295	0	-5.53124
CGATCCGAAATGGGTA	1	1413974	0	-6.40979
TAATGCAGTAAGGGTA	1	1418306	0	-6.4628
GCATTCAATACGGGTA	1	1441025	0	-5.86771
TTACCCAGCATGGGTA	1	1441070	0	-4.88461
TAAACCTTTACGCGTA	1	1441230	0	-6.77295
TTCATCACTACCGGTA	1	1449093	1	-6.73807
TTTCTCGACCGGGGTA	1	1465299	1	-6.43731
TAATTCTAAAACGGTA	1	1485047	1	-3.64417
TATTTCTTCATCGGTA	1	1487908	1	-6.6611
TTCTTCCATATGGGAA	1	1495192	1	-5.78927
TTTATCTAAATTGGTA	1	1509755	0	-6.31733
TTCCTCGGTAGTGGTC	1	1523419	0	-6.77147
TTATTCTTTATGGGTA	1	1524090	1	-1.63942
TATCCCAAAAGGAGTA	1	1541695	1	-6.17787
TGAATCTAAAGGGTTA	1	1542333	1	-6.43589
TACCTCAATAGCGGTA	1	1545284	0	-2.56495
TTCCACTACATCGGTA	1	1549304	1	-6.77059
TCATCCATACTGGGTA	1	1551925	0	-5.48873
TCCCCCTAAAACGGTA	1	1568518	1	-5.42066
TACTCCGGTATAAGTA	1	1570446	1	-6.55289
TTATTCGTCAGGGTTA	1	1594252	1	-6.49257
TTATTCGAAATAGGTA	1	1595534	0	-3.61658
TGATTCTGAAAGGGTA	1	1598204	1	-4.80035
TTCTTCGCGATTGGTA	1	1615559	1	-6.25849
TTAATCCATATGGTTA	1	1617192	1	-6.72082
TAATTCATCATTGGTA	1	1625141	1	-4.37379
TCACTCGACAGGAGTA	1	1627166	1	-5.33057
GAAATCTCAAGAGGTA	1	1636768	1	-6.17787
TAAATCAATACGGGCA	1	1645324	1	-6.68957
TAACCCAAAATGGGTA	1	1656001	1	-1.86768
TCATTCGCAATGGGCA	1	1696660	0	-6.77839
TAATACCAAAGGGGTA	1	1702938	0	-4.74278
GGCTTCATTATGGGTA	1	1712041	1	-5.38814
GGATTCTCTATCGGTA	1	1734555	0	-6.37854
TACCCCTTCACTGGTA	1	1741331	0	-4.9941
TACCCCCAAAGGGGTG	1	1752322	0	-5.48038
TAATCCTTTATGGTTA	1	1752649	1	-4.6667
TACCTCATTCATGGTA	1	1756167	0	-5.14039
TCATTCTCAAGGGGTT	1	1772438	0	-6.12574
TTATTCGAAATGCGTA	1	1774496	1	-5.05167
TTCTTCACTTTGGGTA	1	1805597	0	-5.87584
TACCTCTTTACTGGTA	1	1819584	0	-3.01693
TTACCCAGTACCGGTA	1	1864344	0	-6.12633
TACCGCTTCATGGGTA	1	1871681	0	-4.9941
TAACTCTTCATTGGTG	1	1883591	0	-6.3531
TTCTTCGTCATCGGTA	1	1902720	1	-5.33423
TACTTCTTTACTGCTA	1	1913520	1	-6.52015
TGCTTCTATAAAGGTA	1	1914803	1	-4.90984
TAATTCGATGCGGGTA	1	1916547	0	-5.06343
TTATCCTTTATGGTTA	1	1932838	0	-5.28574
TTCATCACCAAGGGTA	1	1971283	1	-6.59497
TTAACATAAATGGGTA	1	1976515	1	-6.30009
TTCTCCATTAGGAGTA	1	1977718	1	-4.851
TACCCCTTTAATGTTA	1	1986085	1	-6.66325
TAACATTAAAGGGGTA	1	1986085	0	-6.21127
TACACCTTCAGCGGTA	1	1999783	1	-5.67198
TAATTCTTTATTGCTA	1	2009424	1	-5.25449
TGCCTCGCTGGGGGTA	1	2024465	0	-5.81827
TATTTCTATATGGGAA	1	2033501	0	-6.26884
TATATCGAAAGCGGTA	1	2033749	0	-6.46043
TTAGCCAATATGGGTA	1	2037354	1	-4.68394
TAACTGTCACGGGGTA	1	2047871	0	-5.62668
TTAATCAATAGCGGTA	1	2057123	1	-4.48327
GACTTCAAAAAAGGTA	1	2101514	0	-6.54559
TTCTTTATTAGTGGTA	1	2108206	1	-6.62837
TAATCCTGAAGGTGTA	1	2109861	0	-5.59008
TAACTCATAAGAGGTG	1	2112131	1	-6.3531
TACCCCACTGCGGGTA	1	2119600	0	-6.49852
TGACTCAGTAGTGGTA	1	2139345	1	-4.65269
TATTCCGCTATCGGTA	1	2142215	1	-6.49405
TCCATCACTAAGGGTA	1	2144487	0	-5.97593
TATTTCTATATGGGGA	1	2149067	1	-6.26884
TTAACCCATATCGGTA	1	2173000	0	-5.70559
TACCACTTCATCGGTA	1	2193190	1	-6.60354
GTATTCGGTATCGGTA	1	2196416	0	-6.49405
GTAACCAATAGTGGTA	1	2224234	0	-6.42918
TAACCCGTTGCTGGTA	1	2229131	1	-6.75713
TGATTCGATGCGGGTA	1	2236125	0	-6.52977
TTCCTCGGCAATGGTA	1	2261344	0	-6.40159
TTCTTCGATATGGATA	1	2264000	0	-4.94197
TACCCCGATCGGGGTA	1	2301631	1	-2.46487
TACCCCGATCGGGGTA	1	2301631	0	-2.46487
TACACCGTTGTGGGTA	1	2321434	0	-6.1933
CGCTTCGAAATGGGTA	1	2333806	0	-6.06602
TACTCCGTAATTGGCA	1	2337562	0	-6.75208
TAACACGATCGAGGTA	1	2348776	1	-6.10447
TACCTCGATCGTGTTA	1	2348776	0	-6.18815
GAAACCTTTATTGGTA	1	2472847	1	-5.67434
TAATCCTACAGGCGTA	1	2481537	0	-5.38941
TGCTTCTGCATGGGTA	1	2487916	1	-4.96741
TATTTCTTTATGGGCA	1	2494947	1	-6.72082
TTCCGCCATATTGGTA	1	2522173	1	-6.09271
TTACTCACTAAGAGTA	1	2529297	1	-5.44115
TTCTCCGGAAACGGTA	1	2542919	1	-6.69236
GAATCCGTTAGCGGTA	1	2549392	0	-5.33787
TTTATCGACAGGGGTA	1	2564728	1	-6.56865
TACTTTTCAAGGAGTA	1	2576664	1	-6.77237
TACTTCGATAATGTTA	1	2589169	1	-6.52015
TTCTCCGTAAGTAGTA	1	2617311	1	-5.98086
TGATTCAACAATGGTA	1	2643670	1	-6.48675
TTACTCATTCACGGTA	1	2663067	1	-6.1032
TTACCCGATAGTGATA	1	2672360	1	-5.81596
TAATCCCGAAAGGGTA	1	2674150	1	-5.14412
TTCATCTGTACTGGTA	1	2679380	1	-5.94961
TAACTGTTTCGCGGTA	1	2684964	0	-6.53192
TTCTTCGGCAATGGTA	1	2697465	0	-6.76932
TGCACCTTTCAGGGTA	1	2700343	1	-6.69682
TAATCCTCAACTGGTA	1	2701665	0	-4.43263
AAAATCGATAGCGGTA	1	2718008	1	-6.57228
TAAATCTTCATGGGTA	1	2720258	0	-3.58533
TTACTCTTTAGGAGGA	1	2724931	1	-6.15243
TACCTCTGTATAGATA	1	2739311	1	-6.41194
TACCCCGTAATCGGTA	1	2743297	1	-3.75968
TAAATCGATATCGGTA	1	2752176	1	-3.72843
CTCCTCAGTATGGGTA	1	2766663	0	-6.11903
TAACTCTTCACGGGTT	1	2766745	0	-6.3531
TTAATCTCCAGAGGTA	1	2769703	1	-5.94961
TGAATCAAAAAGGGTA	1	2793870	1	-5.38814
TAACTCTTCCGGGTTA	1	2796292	1	-6.38882
TTATTCCAGATTGGTA	1	2797310	1	-6.15028
TAAATCCACAATGGTA	1	2803033	1	-6.62985
TTATCGTGAAGGGGTA	1	2805461	1	-6.30009
TTCCGCAAAATCGGTA	1	2814273	1	-6.46043
TCCTCCCCTACGGGTA	1	2867019	1	-5.89896
TATCTCTCAATCGGTA	1	2870414	0	-5.53124
TCCTTCACCAGAGGTA	1	2875607	0	-6.65381
TAAACCTATCTCGGTA	1	2898745	0	-5.12227
TTCTTCGTTATTGGCA	1	2899213	0	-6.49257
TTGCTCTCAATCGGTA	1	2901239	0	-6.15028
GTATCCTCTCTGGGTA	1	2907637	0	-5.76763
TACATGAATAGTGGTA	1	2917072	1	-6.65596
TTACCGAAAATTGGTA	1	2933621	1	-6.72082
TTACTCGCTGGCGGTA	1	2970787	0	-6.41336
TAAGCCAACAGTGGTA	1	2973840	0	-6.42918
TACCCCTCTATTGGTG	1	2983767	0	-5.90111
TTTTTCATTATTGGTA	1	2989159	0	-6.09144
TAATCCGGCAGCGGTA	1	3013204	0	-5.70559
TAAATCGCTAAAGGTA	1	3027776	1	-5.6155
TTATTCGCTCGGGGTG	1	3040623	0	-6.6977
TAATTCATTATCGGTA	1	3075389	1	-3.41828
GGCTTCGTTATAGGTA	1	3102522	0	-6.6611
TTCCCCGAAACGGGTT	1	3107181	0	-6.55141
TTCGCCATAAGTGGTA	1	3109673	1	-6.56865
TAATGCGCTACGGGTA	1	3119522	1	-5.6155
TTCTTCATAATCAGTA	1	3134642	1	-6.518
TAACCCGCAAGGGGAA	1	3142946	0	-5.25449
TTCCGCAATAGCGGTA	1	3145954	0	-5.89204
TGCCTCTTTTTGGGTA	1	3165999	1	-5.23049
AAATTCGATATCGGTA	1	3194712	1	-5.67434
GAAATCGATACGGGTA	1	3200204	1	-5.16352
TTATTTTTTATAGGTA	1	3250418	0	-6.38435
TATCTCAATATGGGAA	1	3273985	1	-6.68957
TACTTCAAAAATGGTA	1	3309617	0	-4.08886
TTCATCGATACCGGTA	1	3312027	1	-5.61314
TTACCCAAAACGAGTA	1	3315950	0	-5.53124
TAACTCCCCAGGTGTA	1	3329893	1	-6.5986
TAACCCAGAAGGGGCA	1	3340632	1	-6.10178
TGCATCGATAGGGATA	1	3345271	0	-6.68721
TACTCCGTTGGAGGTA	1	3350757	1	-6.50345
TACCTCCAACGGAGTA	1	3350757	0	-5.11497
TTCACCGGCATGGGTA	1	3357448	1	-6.18153
TTCCCCTCACCCGGTA	1	3370280	1	-6.69682
TCAATCTCAAGTGGTA	1	3383604	1	-5.18747
TTAATCACGATGGGTA	1	3385817	0	-6.42791
TGAACCACTAGCGGTA	1	3391447	0	-6.62985
GAATGCTTTAGGGGTA	1	3399347	0	-5.47367
TCACCCGCTCTAGGTA	1	3420462	0	-6.36271
TTACTCTTTAGGAGGA	1	3422146	1	-6.15243
TGTTTCGACAGGGGTA	1	3428481	0	-6.31733
TACCTCTAAAGGTGTT	1	3443853	0	-6.7148
TAATCCGGTATTGGTA	1	3455150	0	-3.9291
TACCCATTAAGGAGTA	1	3491547	1	-6.57899
TACTCCTTAATGGGTA	1	3491547	0	-2.06599
TAATTCTCAAGGAGAA	1	3512702	0	-6.60531
GCCTTCGCTCGGGGTA	1	3527762	0	-6.52247
TTACCCGGGAAGGGTA	1	3534466	1	-6.74537
TTCCCCGGCAGGGGTA	1	3534869	0	-4.51452
TCATTTGTTATGGGTA	1	3544164	0	-6.0742
TATTTCATTATCGGTA	1	3555860	0	-5.98323
GTACTCGACATCGGTA	1	3560455	0	-6.29338
TTCCTCGTCATCGGTA	1	3598994	0	-4.96651
TTACCGGCAATGGGTA	1	3624031	0	-6.0742
TAACCCGTTCTGGGTG	1	3639442	1	-6.08596
GTATTCTCTATCGGTA	1	3694108	1	-5.53124
TTCGCCTTTATCGGTA	1	3721685	1	-6.12396
GTATTCTTCCTGGGTA	1	3724562	1	-6.38667
GAACCCACCAGGGGTA	1	3731120	1	-5.49999
GGCTTCGGTAGGGGTA	1	3743137	0	-5.69829
TGCCCCTAAAGTGTTA	1	3790492	1	-6.74605
TAACACTTTAGGGGCA	1	3790492	0	-6.29553
GACCCCCATCGTGGTA	1	3798100	0	-6.35669
TGCCGCGAACTGGGTA	1	3814572	1	-6.69682
TTCTTCTGTTTGGGTA	1	3816016	0	-5.59821
TCCCTCTTTCAGAGTA	1	3837138	1	-6.66557
TTATTCAGTATGGGTA	1	3856666	0	-3.27518
TGCATCGATCGGGGTA	1	3872824	0	-4.88671
TTCTTCGTAACCGGTA	1	3922125	1	-5.33423
TTACTCTTTAGGAGGA	1	3943585	0	-6.15243
CTCTTCTTTACGGGTA	1	3965123	0	-5.94961
TACTTCCTCAACGGTA	1	3982237	0	-6.6611
TAAATCCAGACGGGTA	1	3989722	0	-6.62985
TTACTCTTTAGGAGGA	1	4037358	0	-6.15243
TAACCCTTAACGGGTC	1	4048799	0	-5.76531
CACTTCGTTATCGGTA	1	4053677	1	-6.29338
TTTACCGATATGGGTA	1	4064558	0	-5.81381
TACTTCACAAGGGGTG	1	4085689	0	-5.61491
TTACCCTCCCTGGGTA	1	4104917	0	-4.92033
TTATTCTTAAGTCGTA	1	4110498	1	-5.94961
TTCCTCGAACTGGATA	1	4138949	0	-6.27697
TGCCTCTCTCCCGGTA	1	4139801	1	-6.66557
TAACTCGCTAACGGTA	1	4154797	0	-4.14916
TTACTCTTTAGGAGGA	1	4168478	0	-6.15243
TACTTCAGACATGGTA	1	4171887	0	-6.72314
TAACCCAAAAGCGATA	1	4187490	0	-6.41194
TTACTCTTTAGGAGGA	1	4209880	0	-6.15243
CACTTCTTTAGCGGTA	1	4223779	0	-5.64072
GTACCCGCAAGGAGTA	1	4224051	1	-6.62985
TTCCTCTTCCGAGGTA	1	4228646	1	-5.64885
AAACTCGATACCGGTA	1	4263724	1	-6.40523
TTATTTGATATTGGTA	1	4266274	0	-5.87353
TTCCTCGAAATGGTTA	1	4279688	0	-4.94197
TAACTCTAAAGTGGTA	1	4285168	1	-1.46634
TTACTCAAACCCGGTA	1	4310444	0	-6.01894
TACACCATTATGGATA	1	4341304	1	-6.72082
TACCCACAAATGGGTA	1	4346659	0	-5.68105
TAATTCAAAGGGAGTA	1	4349291	1	-6.41426
TTCATCGACATCGGTA	1	4349773	0	-5.98086
TTCTTCATCCCGGGTA	1	4363109	0	-6.49488
TGCTCCTTTATAGGTA	1	4379982	1	-4.77404
TTGCTCTTCAGCGGTA	1	4408442	0	-6.71175
TAATTCCACATGGATA	1	4417419	0	-6.46951
TTCTTCTCCATCGGTA	1	4418827	1	-5.21872
GAATTCGATAAGGGTA	1	4437260	1	-4.0649
TTCTTCTTTTGCGGTA	1	4448450	0	-6.15968
TAATCCTGTAGGGGAA	1	4473325	1	-5.31333
GACCGCTATATCGGTA	1	4484907	1	-6.63112
TGTCCCTTAATTGGTA	1	4499448	0	-6.6611
TACGCCATTACGGGTA	1	4527424	0	-5.78255
TAAATCGACATGGGCA	1	4540640	0	-6.72082
TTAAACAAAATGGGTA	1	4543602	1	-6.15028
TCACCCGGAATAGGTA	1	4593623	0	-5.90626
TAACTTTAAAGGGGTT	1	4626784	0	-6.63871
****************
Average: -24.2119	Std. Dev.: 4.17473