Motif Search v1.1 April 7, 1998 by Jason D. Hughes

Motif:
ttgctgcgcaagcgttttccagaaca	1	1	1	-8.95369
ATAAAAAGCAATCGTTTTCGTGGGGA	2	1	1	-4.74456
GGCAAAAGAGAACGATTGCGTTGGGG	3	1	1	-6.61153
gctggatgcaaacgatttcaaggaat	4	1	1	-9.86752
cctgaaggtaatcgtttgcgtaaatt	5	1	1	-8.77674
ggtagatgcaatcggttacgctctgt	6	1	1	-8.07955
atcgcaagaaaacgttttcgcgaggt	7	1	1	-6.19182
tgttgaggaaaacgattggctgaaca	8	1	1	-7.97057
tttttaagcaaacggtgattttgaaa	9	1	1	-9.73135
TGCCGACGCAATCGGTTACCTTGATG	10	1	1	-5.51179
atgatacgcaaacgtgtgcgtctgca	11	1	1	-6.58744
GAGCAAGGAAAACGGTTGCGTGGCTG	12	1	1	-4.85621
tccctacgcaaacgttttctttttct	13	1	1	-4.26946
GCGTTGCGCAAACGTTTTCGTTACAA	14	1	1	-4.38587
tttccacgcaaacggtttcgtcagcg	15	1	1	-4.71541
cagtctcgcaaacgtttgctttccct	16	1	1	-8.81603
tgtaaaggcaaacgtttaccttgcga	17	1	1	-2.74834
gaaacgagcaaacgtttccactacaa	18	1	1	-8.83995
GACACACGCAAACGTTTTCGTTTATA	19	1	1	-1.76095
tgcaaaggaaaacgtttccgcttatc	20	1	1	-5.61162
AGGTTCGGAAAACGTTTGCGTTTTTT	21	1	1	-6.2719
tgaaaaagaaaccggttgcgcagttg	22	1	1	-8.64649
**************************
Average: -6.54313	Std. Dev.: 2.28795

Sites scoring better than avg-2*sdev:
TTGCTGCGCAAGCGTTTTCCAGAACA	1	29410	1	-8.95369
CGAAAACGCGAAAGTTTGCGTGGTTA	1	97695	1	-9.85631
TTGAAGTGAAATCGGTTACGTTAGCG	1	161061	0	-7.82011
TCCCCACGAAAACGATTGCTTTTTAT	1	354059	1	-6.81341
ATAAAAAGCAATCGTTTTCGTGGGGA	1	354059	0	-4.74456
GCAGCAGGACAACGGTTTCGTCGCCT	1	370561	0	-10.787
CATTTACGTAATCGATTGCGTTCACG	1	431371	1	-9.49195
CGTGAACGCAATCGATTACGTAAATG	1	431371	0	-7.89987
GAGCAAGGAAAACGGTTGCGTGGCTG	1	552390	1	-4.85621
CAGCCACGCAACCGTTTTCCTTGCTC	1	552390	0	-8.74844
ACCTAACGCAAAAGTTTATGTTGAAG	1	584046	0	-10.1878
CTGATGGGCGAACGTTTTGGTGGTCA	1	639693	1	-10.4777
TTACATCGCAAACTGTTGCGCTGGTA	1	680086	1	-10.0426
TGGAACTGAAATCGGTTTCGCCGAGG	1	750675	1	-10.0153
GATACAGGCAAACGGGTTCGCACCCG	1	752933	1	-9.83854
TTTCAACGTAAACATTTACGCCGAGT	1	765842	0	-10.7182
AAGAGAAGAAAACCTTTGCCATTACG	1	769281	1	-10.8194
CGTAAACGCGAACTGTTGCCTTATCT	1	796263	1	-10.7744
GGGCGATGAAATCGTTTTTGTCGGTG	1	818787	1	-9.82542
GACCCACGAAATCGGTTTTGCCGAGA	1	845086	0	-10.1322
TAAAAAAGCGATCGATTTCTCTGACG	1	846912	0	-10.0539
TGGTTACGCGAACGGGTGGGTTATCA	1	929920	0	-10.408
TGATGAAGCAAACGCTTATGCTGCCG	1	938395	1	-10.7956
GGCAGACGAAATCGTGGTCGTCGAGG	1	967475	1	-10.6402
TAGTGAAGAAAAGGGTTTCTCTGTCT	1	998030	0	-10.703
AGGTTCGGAAAACGTTTGCGTTTTTT	1	1003884	1	-6.2719
AAAAAACGCAAACGTTTTCCGAACCT	1	1003884	0	-9.22735
TTCTTACGCAGACGGGTGCGTTTATC	1	1041980	1	-10.5823
GGAAAGTGAAAACGGTTGCAATCAGG	1	1108394	1	-10.8133
GATAAGCGGAAACGTTTTCCTTTGCA	1	1121877	1	-7.96146
TGCAAAGGAAAACGTTTCCGCTTATC	1	1121877	0	-5.61162
GGAATGCGCGAACGATTACGTTGCTC	1	1142936	1	-9.68072
TGCAAACGCACACGTTTTGGCTGCAT	1	1177080	0	-8.78335
CATCAAGGTAACCGATTGCGTCGGCA	1	1191005	1	-10.9902
TGCCGACGCAATCGGTTACCTTGATG	1	1191005	0	-5.51179
CGCTTCAGCAACCGTTTTCTCTTCCT	1	1235769	1	-10.9268
ACCTCGCGAAAACGTTTTCTTGCGAT	1	1261436	1	-9.06185
ATCGCAAGAAAACGTTTTCGCGAGGT	1	1261436	0	-6.19182
GGCATAAGAAAACGGCTCCCTGTTGT	1	1294541	1	-10.5364
GCGTCAGGATAACGATTTCCTTTACG	1	1348146	0	-10.1344
TCGTAATGAAAACGGTTAGGTGAGCA	1	1375090	0	-8.548
TCGCAAGGCAACCGTTTCGTTGAAGG	1	1380512	0	-10.8162
TTACGACGCAGACGTTTTTGTAATTT	1	1409899	1	-11.1164
GACTTAAGCGACCGATTTCATTACGA	1	1491252	0	-10.9408
AGGTGGCGCAAACGGATGCGCTGACT	1	1493049	1	-9.46479
TGCCGAGGAAATCGATTTCATCCTGG	1	1537830	1	-10.7895
TTAATAAGAAAACTGTTTCTTTCAAT	1	1596324	1	-9.95948
CAGATACGCTAACGTGTTCGCTGGTT	1	1686305	1	-10.3888
GGTCTGTGCGACCGTTTTCGTGGTTT	1	1726395	1	-10.346
TGTAAAGGCAAACGTTTACCTTGCGA	1	1735803	1	-2.74834
TCGCAAGGTAAACGTTTGCCTTTACA	1	1735803	0	-5.53961
GAAACGAGCAAACGTTTCCACTACAA	1	1735891	1	-8.83995
GCAACACGCAAACGATTTACTCGTCG	1	1766913	0	-11.0419
TGTTGGAGTAACCGGTTTCGTTGTCG	1	1861730	0	-9.65817
GCCACAGGCAAACGGCTTCGTTTTCT	1	1919002	0	-7.53678
CCTTTGCGAAAATGTTTGCGATGGTA	1	1925536	1	-10.9958
GACACACGCAAACGTTTTCGTTTATA	1	1928847	1	-1.76095
TATAAACGAAAACGTTTGCGTGTGTC	1	1928847	0	-4.66562
ATGCAACGCGAATGATTTCGTGTATT	1	1946739	1	-10.8499
CAGTGGCGCAAAAGGTTTCGTTATTT	1	1983893	0	-10.316
GGCAAATGAAAGCGGCTTCGCTAATG	1	2040625	1	-10.8603
AGGTAATGCAACCGGTTACCCTCCTG	1	2075239	0	-10.7657
CCTGAAAGAAAACGGTTTTATTAAAA	1	2192658	1	-9.56526
AGTTGAAGAAATCGGTTTGCCGGGTA	1	2211837	1	-10.6012
GTTATAGGAAAACGCTTTGGCGATTT	1	2236809	1	-10.1736
TTTTTCAGCAAAGGGTTGCGATACCA	1	2269193	0	-10.7486
GATAAACGAACACGTTGGCGATGGCG	1	2349596	1	-10.9504
CTGAAAGGCAAACGGGTAGGCGTATT	1	2424393	0	-11.0208
AGAAAAAGAAAACGTTTGCGTAGGGA	1	2428835	1	-4.79177
TCCCTACGCAAACGTTTTCTTTTTCT	1	2428835	0	-4.26946
GAGATAAGTAATCATTTCCGTTTTTA	1	2461601	0	-11.0966
TGAAGTGGAAATCGTTTTCATAAATG	1	2466329	1	-9.92404
CGCTGAGGTAAACGGTGACGTGGTCG	1	2549993	0	-11.0814
TGGTCAGGCGACCGTTTGCCATAATG	1	2555370	1	-9.92341
TGCAGACGCACACGTTTGCGTATCAT	1	2595787	1	-7.68788
ATGATACGCAAACGTGTGCGTCTGCA	1	2595787	0	-6.58744
CAGTCTCGCAAACGTTTGCTTTCCCT	1	2619133	1	-8.81603
AGGGAAAGCAAACGTTTGCGAGACTG	1	2619133	0	-5.74261
GGTAGATGCAATCGGTTACGCTCTGT	1	2632139	0	-8.07955
GTGAGCGGCAATCGTTTTGTCTGGCA	1	2672515	0	-10.7623
AATTTACGCAAACGATTACCTTCAGG	1	2683641	1	-7.23785
CCTGAAGGTAATCGTTTGCGTAAATT	1	2683641	0	-8.77674
GCTGGATGCAAACGATTTCAAGGAAT	1	2685491	0	-9.86752
CGCTGACGAAACCGTTTGCGTGGAAA	1	2693635	1	-6.75736
TTTCCACGCAAACGGTTTCGTCAGCG	1	2693635	0	-4.71541
TGAAAATGAAAACGTTGCCTTTAAAG	1	2756084	0	-9.06398
GCAATCAGCAACCGTTTTCGTGGCTT	1	2807515	1	-8.22615
TGCAAAGGCGATCGTTTGCCATCGCG	1	2845679	0	-9.64514
TGTGGTCACAAACGATTTCGTTATTG	1	2858879	0	-10.4304
TCAAAAAGAAAAAGTTTACGTACAAG	1	2888334	0	-10.6589
TTGCAACGCAAACGTTTCCCTATTTT	1	2925839	1	-6.19743
AAAATAGGGAAACGTTTGCGTTGCAA	1	2925839	0	-6.87015
AAAAAAGCCAAACGTTTTCGTATTTT	1	3004066	1	-9.1374
AAAATACGAAAACGTTTGGCTTTTTT	1	3004066	0	-7.96896
CATTAACGTAAACGGTTGCTTTTTAC	1	3029335	1	-10.295
GTAAAAAGCAACCGTTTACGTTAATG	1	3029335	0	-5.24065
GGCAAAAGAGAACGATTGCGTTGGGG	1	3048773	0	-6.61153
TGTTGAAGCGAACGTTTTCCAGAACA	1	3070297	1	-7.83357
CAACTGCGCAACCGGTTTCTTTTTCA	1	3084044	1	-10.7253
TGAAAAAGAAACCGGTTGCGCAGTTG	1	3084044	0	-8.64649
TGTCACGGCGAGCGGTTGCGTGTCGA	1	3138035	0	-10.8976
ACGGTAAGAGAACGGTTGCGCCATCA	1	3163702	1	-10.5387
TTTATCGGAAAGCGGTTTCCCTTCTT	1	3227034	0	-10.1661
GCATAAAGAATACGATTTCTTTACCG	1	3231811	0	-10.8652
GGAATACGCAGACGTATTCCTTTTTT	1	3236096	1	-11.1158
GCTATCCGCAAACGATTCTGCTGCTG	1	3245612	1	-10.6788
TGTGAATGCAATCGTTTTCCATAAAT	1	3265216	1	-7.31713
ATTTATGGAAAACGATTGCATTCACA	1	3265216	0	-9.34947
GTCAGCCGAAAACGGTAGCGTTAATT	1	3297326	0	-9.1282
AATTTACGCAATTGGTTACGATGAGT	1	3325326	0	-10.9168
TACTCATGCAAACGTTTGATCTGAAT	1	3548491	1	-9.70637
ATTCAGATCAAACGTTTGCATGAGTA	1	3548491	0	-10.1472
TTCTAATGCAAGCGATGACGTTTTTT	1	3550607	0	-10.5358
TTTTCACGCAATCGTTAACCTAGTTT	1	3606684	0	-10.4019
TCTCACGGAAAACGGTGCCGTTTTCA	1	3634362	1	-10.3984
GGTAGAAGAACACGTTGGCTTTGTCG	1	3772485	1	-10.8195
TACCATAGTAAACGTTGACGTTTATG	1	3797529	0	-10.5998
GGATGTGGCAAACGTTTGCTTTTCTC	1	3826499	1	-8.84729
GAGAAAAGCAAACGTTTGCCACATCC	1	3826499	0	-8.56642
AAAATGCGCAACCGGTTGCGCAGACT	1	3826597	1	-10.0517
AGTCTGCGCAACCGGTTGCGCATTTT	1	3826597	0	-10.1283
TGCCGAAGAAAAAGTTTACCCGATGG	1	3848764	0	-10.9771
GTGCTCGGAAAACGTATTCGCGACCT	1	3862975	0	-11.1128
GCGCAACGCAATCGTTGCCGTATAAG	1	3894333	0	-9.84979
CGACCACGCGATCGTTTTCGACAATA	1	3922853	1	-10.4749
TTGAATACAAAACGGTTTCTTTTATT	1	3929565	1	-10.3548
TGGAAGAGCGAGCGTTTCCGCTTGCT	1	3930260	1	-10.5913
GTACCGGGAAAACGATGGCGTTTCTT	1	3963054	0	-9.77998
GCCGTAAGCAAACGCTTTTTTGGTTA	1	4056321	0	-10.976
AGCAAACCCGAACGGTTTCCTGGTTT	1	4146473	0	-10.7154
TTTATACGTAAGCGAATGCGTTAAAA	1	4178084	0	-10.8251
TTGTAACGAAAACGTTTGCGCAACGC	1	4205213	1	-6.97915
GCGTTGCGCAAACGTTTTCGTTACAA	1	4205213	0	-4.38587
GCGTGAAGAAAACGTCTTTGTGATGA	1	4211903	1	-11.1018
GGGTGTCGAAAACGGTTTCAATCAGG	1	4221940	0	-10.8752
TTGATGCGCAAACGTTATCGTCGGTG	1	4275781	0	-8.5164
AAAAAAAGCAAACGATTATCCGGCGA	1	4275880	0	-10.5486
TGTTGAGGAAAACGATTGGCTGAACA	1	4402139	1	-7.97057
TGTTCAGCCAATCGTTTTCCTCAACA	1	4402139	0	-9.20722
TTTTTAAGCAAACGGTGATTTTGAAA	1	4402238	1	-9.73135
AATCAACGCAAACGTTGGTGCCACCT	1	4417020	1	-10.7928
TGTCAGCGCAAACGGTTTATTTGAAT	1	4470179	1	-8.69758
ATTCAAATAAACCGTTTGCGCTGACA	1	4470179	0	-9.87328
AGGACACGAAAACGCTGTCGCTGACG	1	4529138	0	-9.54388
TTATTAAGCAAACGTTCGCTTTTATA	1	4538420	1	-7.53476
TATAAAAGCGAACGTTTGCTTAATAA	1	4538420	0	-7.79818
**************************
Average: -35.6002	Std. Dev.: 5.58185