Description of column headings
for Tables a1 to a10
Spot ID
A prefix "M" is from E.
coli cells harvested during growth phase in glucose-minimal
media and "R" is from cells harvested at early stationary
phase in rich media.
N-terminal Sequence Tag
The N-terminal amino acid sequence
tag. A single upper case letter indicates an unambiguous PTHaa
signal in the cycle. A lower case letter indicates that the PTHaa
signal is close to the level of background noise or lag. Parentheses
indicate that a cycle had two or more PTHaa signals.
The order of amino acids in parentheses is from strongest to
weakest PTHaa signals. An upper case "X"
indicates no PTHaa signal could be detected above the
background lag. A lower case "x" indicates instrument
failure in the cycle and no amino acid call. The symbol "XXXXXXXXXXXX"
indicates that no PTHaa sequence signal was detected
above the background lag during the entire sequencing run.
The observed protein sequence compared
to the amino terminal sequence of the matching conceptual protein
in the E. coli genome. The predicted sequence is shown
and the observed sequence is in bold. An "*" in the
protein sequence shows the observed start site based on the N-terminal
sequence tag. An underlined amino acid indicates a discrepancy
between the predicted sequence and the observed sequence tag.
The predicted amino acid is shown. For query-sequence matching
the internal region of an E. coli gene, the numbers of
amino acids between the predicted N- and C- termini of the conceptual
protein that match the start and stop sites of the sequence tag
are shown in parentheses.
Locus - The
E. coli gene symbol assigned to the ORF identified by the
protein sequence. The symbol "NM" indicates that the
query string was used to search the database, but no significant
match was found.
cpI
- The predicted isoelectric
point calculated from the conceptual sequence of the protein.
opI
- The observed isoelectric
point of the protein calculated from the 2-DE gel (x) coordinate
of the spot.
MW - The
predicted mass calculated from the conceptual sequence of the
protein. The units are kDa.
Mr - The
observed mass of the protein calculated from the 2-DE gel (y)
coordinate of the spot. The units are kDa.
O-abd
- The observed abundance
on the master 2-DE gel.
N-abd - The
estimated cellular abundance of the protein species. The units
are molecules/cell.
Table a1. Growth-phase, minimal-media E. coli proteins from a SDS/heat extract
Locusd | |||||||||
M1 | SVIKMT | m*svikmt | pgk | ||||||
M2-1 | (MSD)(QDL)(IG)(NSK)(VT)(ARKT) | m*slintk | ahpC | ||||||
M2-2 | (MSD)(QDL)(IG)(NSK)(VT)(ARKT) | mqgsvt | rpoA | ||||||
M3 | ATGKIT | m*atgkiv | atpD | ||||||
M4 | MQVSVE | mqvsve | tig | ||||||
M5 | TDKLT(AS) | m*tdklts | talB | ||||||
M6 | AEITAX | m*aeitas | tsf | ||||||
M7 | MRIILLGAPGAG | mriillgapgag | adk | ||||||
M8 | APKDNTXYTGAK | mkktaiaiavalagfatvaqa*apkdntwytg
ak | ompA | ||||||
M9 | (Mq)KVAVLGAAGGI | mkvavlgaagg | mdh | ||||||
M10-1 | (ST)(KI)(IA)(FX)(EV)(Di)(Ng)(ST)(LX)(Tg)(IX)
(Ga) | m*skifednsltig | cysK | ||||||
M10-2 | (ST)(KI)(IA)(FX)(EV)(Di)(Ng)(ST)(LX)(Tg)(IX)
(Ga) | m*tiaivigthgwa | manX | ||||||
M11 | ANPLYQKHIISI | m*anplyqkhiis | pyrB | ||||||
M12 | SILIDKNTKVIX | m*silidkntkvic | sucD | ||||||
M13 | AVTKLVLVRHGE | m*avtklvlvrhge | gpmA | ||||||
M14 | AAKDVKFGNDAR | m*aakdvkfgndar | mopA | ||||||
M15 | SKIVKIIGR | m*skivkiigr | eno | ||||||
M16 | (Mqh)LKRE(Mh)NIADYD | mlkremniadyd | glyA | ||||||
M17 | (Mqth)(Ka)(It)VEVKHPLVK | mkivevkhplvk | upp | ||||||
M18-1 | (ETMA)(DQS)(IX)(KF)(VNH)(AF)(VS)(VX)(GX)
(AP)(Mh)SG | mntkgkallaglialafsnmala*edikvavvg
amsg | livJ | ||||||
M18-2 | (ETMA)(DQS)(IX)(KF)(VNH)(AF)(VS)(VX)(GX)(AP)(Mh)SG | NM | |||||||
M19 | (Mq)LRIAKEALTFD | mlriakealtfd | guaB | ||||||
M20 | ADVPAGVTLAEK | mtnitkrslvaagvlaalmagnvala*advpag
vtlaek | oppA | ||||||
M21 | GLFDKLKSLVSD | m*glfdklkslvsd | crr | ||||||
M22 | MNXEILAVVEXV | mnkeilavveav | nusA | ||||||
M23 | TIKVGIDGFGRI | m*tikvgingfgri | gapA | ||||||
M24 | (Mqk)RLEFSIYRYN | mrlefsiyryn | sdhB | ||||||
M25 | AVGLHYFSK | (36)k*avglhyfsk(313) | ompF | ||||||
M26 | AP(KV)D(NK)(Td)m(YV)Vsr(kv) | NM | |||||||
M27 | (Sk)(AG)EHVLTMLN | m*saehvltmln | glnA | ||||||
M28 | SAEHVLTMLNE | m*saehvltmlne | glnA | ||||||
M29-1 | (MSq)(NDM)(Prt)(Lk)(KI)(AD)(GV)(Dks)(IX)(AL)
(Pg)(Kr) | mnplkagdiapk | bcp | ||||||
M29-2 | (MSq)(NDM)(Prt)(Lk)(KI)(AD)(GV)(Dks)(IX)(AL)
(Pg)(Kr) | NM | |||||||
M30-1 | (AP)(DPL)(YL)(DL)(DSI)(dfs)(kft)(etv)(vd) | M*PLLDSFTVD | ygaG | ||||||
M30-2 | (AP)(DPL)(YL)(DL)(DSI)(dfs)(kft)(etv)(vd) | MPLLDSFTV | ygaG | ||||||
M31-1 | SL(IL)N(TV)(PK)(IA)(GK)(KP)(DF)(LK)(NP) | m*slintkikpfkn | ahpC | ||||||
M31-2 | SL(IL)N(TV)(PK)(IA)(GK)(KP)(DF)(LK)(NP) | m*sllnvpagkdlp | ppa | ||||||
M32 | SQTVHFQGNPV(TS) | M*SQTVHFQGNPVT | tpx | ||||||
M33-1 | (MAQHS)(EK)(SHQ)(KLQ)(VIF)(VGT)(VS)(PRE)
(AS)(QHM)(GAS)(KV) | meskvvvpaqgk | icdA | ||||||
M33-2 | (MAQHS)(EK)(SHQ)(KLQ)(VIF)(VGT)(VS)(PRE)
(AS)(QHM)(GAS)(KV) | NM | |||||||
M34 | TIKVGINGFG | m*tikvgingfg | gapA | ||||||
M35 | MRXPLVMGNXKL | mrhplvmgnwkl | tpiA | ||||||
M36 | SFELPALPYAKD | m*sfelpalpyakd | sodB | ||||||
M37 | AEKINFGVSATY | mkklvlaallasftfgasa*aekinfgvsaty | artJ | ||||||
M38-1 | (SM)(YI)(TS)(LD)(PI)(sr)(LK)(PD)(Ya)(AE)(YV)
(DR) | m*sytlpslpyayd | sodA | ||||||
M38-2 | (SM)(YI)(TS)(LD)(PI)(sr)(LK)(PD)(Ya)(AE)(YV)
(DR) | misdirkdaevr | frr | ||||||
M39 | AKIKGQVKXFNE | m*akikgqvkwfne | cspC | ||||||
M40 | MVTFHTNHGDIV | mvtfhtnhgdiv | ppiB | ||||||
M41 | MQVILLDKVANL | mqvilldkvanl | rplI | ||||||
M42-1 | (MT)(TH)(HD)(DN)(Nk)(KL)(LQ)(QV)(VE)(EA)
(AI)(Ik) | mthdnklqveai | pyrI | ||||||
M42-2 | (MT)(TH)(HD)(DN)(Nk)(KL)(LQ)(QV)(VE)(EA)
(AI)(Ik) | m*thdnklqveaik | pyrI | ||||||
M43 | GKIIGIDLGTTN | m*gkiigidlgttn | dnaK | ||||||
M44-1 | (MX)(TE)(ES)(SF)(FA)(AQ)(QL)(LF)(FE) | mtesfaqlf | rpsA | ||||||
M44-2 | (MX)(TE)(ES)(SF)(FA)(AQ)(QL)(LF)(FE) | m*tesfaqlfe | rpsA | ||||||
M45 | MISGILAXPGI | misgilaspgi | ptsI | ||||||
M46 | AAKDVKFGNDAR | m*aakdvkfgnda | mopA | ||||||
M47 | DDNNTLYFYNXT | mkkwsrhllaagalalgmsaaha*ddnntlyf
ynwt | potD | ||||||
M48 | TQFAFVFPGQ | m*tqfafvfpgq | fabD | ||||||
M49 | (Mq)FEPMELTNDAV | mfepmeltndav | ftsZ | ||||||
M50 | AE(Vi)YNKDGN | mkvkvlsllvpallvagaana*aevynkdgn | ompC | ||||||
M51 | AEI(Yi)NKDGNKVD | mmkrnilavivpallvagtana*aeiynkdgn
kvd | ompF | ||||||
M52-1 | (AX)(IP)(PK)(QD)(NX)(IT)(RX)(IY)(GX)(TX)
(DA)(PK) | MKKLVLSLSLVLAFSSATAALA*A
IPQNIRIGTDP | hisJ | ||||||
M52-2 | (AX)(IP)(PK)(QD)(NX)(IT)(RX)(IY)(GX)(TX)
(DA)(PK) | mkktaiaiavalagfatvaqa*apkdntwytg
ak | ompA | ||||||
M53-1 | (DA)(EL)(GP)(LE)(LT)(NV)(KR)(VI)(KG)(EX)
(RD)(GX) | MKLAHLGRQALMGVMAVALVAG
MSVKSFA*DEGLLNKVKERG | fliY | ||||||
M53-2 | (DA)(EL)(GP)(LE)(LT)(NV)(KR)(VI)(KG)(EX)
(RD)(GX) | mkksilalsllvglstaassya*alpetvrigtdt | argT | ||||||
M54 | MQKQAELYRG(Kr)A | mqkqaelyrgka | purC | ||||||
M55 | ARTTPIARYRNI | m*arttpiaryrni | fusA | ||||||
M56 | (Ma)(Lr)EEYRK(Hr)VA(EG) | VLEEYRKHVAE | yacI | ||||||
M57 | (SM)EKTFLVEIGTe | m*sektflveigte | glyS | ||||||
M58 | x(Qi)(Ev)s(Lp)RNIA(Vi)IA | mieklrniaiia | yihK | ||||||
M59 | MLNPIVRKFQYG | mlnpivrkfqyg | pnp | ||||||
M60 | AEGFVVKDIXFE | mamkklliasllfssatvyg*aegfvvkdihfe | yaeT | ||||||
M61 | AEGFVVKDIHF(Ev) | mamkklliasllfssatvyg*aegfvvkdihfe | yaeT | ||||||
M62 | ADLAS | MKKRIPTLLATMIATALYSQQGL
A*ADLAS | imp | ||||||
M63-1 | (Ma)(Nd)(Li)(Hfk)(Ev)(Yf)(QX)(Av)KQLF | mnlheyqakqlf | sucC | ||||||
M63-2 | (Ma)(Nd)(Li)(Hfk)(Ev)(Yf)(QX)(Av)KQLF | NM | |||||||
M64 | (Mq)KNVGFIGGRGM | mknvgfigwrgm | asd | ||||||
M65 | A(QD)IFNFSSGPAM | m*aqifnfssgpam | serC | ||||||
M66-1 | (SM)(KFq)(IE)(FN)(DI)(FT)(VGa)(KA)(Pi)(GA)
(VD)(IPSy) | m*skifdfvkpgvi | fba | ||||||
M66-2 | (SM)(KFq)(IE)(FN)(DI)(FT)(VGa)(KA)(Pi)(GA)
(VD)(IPSy) | mfenitaapadp | aspC | ||||||
M67-1 | (Mast)(NI)(YK)(QV)(NG)(DI)(DX)(Lg)(Rf)(IX)(KX)(Ea) | mnyqnddlrike | aroG | ||||||
M67-2 | (Mast)(NI)(YK)(QV)(NG)(DI)(DX)(Lg)(Rf)(IX)
(KX)(Ea) | M*TIKVGINGFGRI | gapA | ||||||
M68-1 | (Mas)(NL)(LD)(TK)(EI)(LV)(KI)(NA)(TN)(PR)
(GV)(Esil) | mnltelkntpvs | rho | ||||||
M68-2 | (Mas)(NL)(LD)(TK)(EI)(LV)(KI)(NA)(TN)(PR)(GV)(Esil) | mldkivianrge | accC | ||||||
M69 | MRIEEDLKLg(Fv)l | mrieedlklgfk | guaC | ||||||
M70 | (MAi)(Ed)IL(av)(dk)e(en)X(ap)s(va) | NM | |||||||
M71 | ANYFNTLNLRQQ | m*anyfntlnlrqq | ilvC | ||||||
M72 | ANYFNTLNLRQQ | m*anyfntlnlrqq | ilvC | ||||||
M73 | MKLYNLKD(HD)NE(QE) | mklynlkdhneq | thrC | ||||||
M74 | TTILKHLPVGqR | m*ttilkhlpvgqr | argG | ||||||
M75-1 | (Sma)(KNE)(IN)V(Vk)(Vi)(il)(fg)(ta)(eaqgd)ii | m*skivkiigreii | eno | ||||||
M75-2 | (Sma)(KNE)(IN)V(Vk)(Vi)(il)(fg)(ta)(eaqgd)ii | NM | |||||||
M76-1 | (Sgam)(KN)(IN)(Vtge)(KX)(IX)(Il)(Gd)(Rtd)(Eq)
(IX)(Ivl) | m*skivkiigreii | eno | ||||||
M76-2 | (Sgam)(KN)(IN)(Vtge)(KX)(IX)(Il)(Gd)(Rtd)(Eq)
(IX)(Ivl) | M*GNNVVVLGTQWG | purA | ||||||
M77-1 | (AS)(NE)(LY)(FS)(VQ)(TG)(LV)(NGP)(LQ)(rX)
(lX)(rX) | M*ANYFNTLNLRQQ | ilvC | ||||||
M77-2 | (AS)(NE)(LY)(FS)(VQ)(TG)(LV)(NGP)(LQ)(rX)(lX)(rX) | NM | |||||||
M78 | MEXKVVVPAQGK | meskvvvpaqgk | icdA | ||||||
M79 | MESKVVVPAQGK | meskvvvpaqgk | icdA | ||||||
M80-1 | (ASX)(FX)(KF)(KX)(gX)(Ig)(VI)(GV)(LG)(PL)
(NP)(VN) | m*gfkcgivglpnv | ychF | ||||||
M80-2 | (ASX)(FX)(KF)(KX)(gX)(Ig)(VI)(GV)(LG)(PL)
(NP)(VN) | mgfkcgivglpn | ychF | ||||||
M81 | AKTLYEKLFDA(AH) | m*aktlyeklfdah | leuC | ||||||
M82 | ADVPAGVtLAEK | mtnitkrslvaagvlaalmagnvala*advpag
vtlaek | oppA | ||||||
M83 | MKKTKIVaTIg(PG) | mkktkivctigp | pykF | ||||||
M84 | STEIKTQVVVL(IG) | mm*steiktqvvvlg | lpdA | ||||||
M85 | (Kms)(Ts)LVYXSEGsP | mrislkksgmlklglslvamtvaasvqa*ktlvy
csegsp | dppA | ||||||
M86 | STEIKTQVVVlg | mm*steiktqvvvlg | lpdA | ||||||
M87 | MQLNSTEISELI | mqlnsteiseli | atpA | ||||||
M88 | (Si)NKPFHYQAPF | m*snkpfhyqapf | fumA | ||||||
M89 | MIKSALLVLEDG | miksallvledg | carA | ||||||
M90 | (MS)(Kg)LPIYLDYsAT | MMYGVYRA*MKLPIYLDYSAT | yhfO | ||||||
M91-1 | (AT)(IT)(EL)(LQ)(NTV)(AP)(YI)(FS)(RG)(AE)
(FT)(GF) | M*TTLLNPYFGEFG | trpB | ||||||
M91-2 | (AT)(IT)(EL)(LQ)(NTV)(AP)(YI)(FS)(RG)(AE)
(FT)(GF) | M*AIEQTAITRATF | argD | ||||||
M92-1 | (AM)(KL)(VX)(RS)(Le)(ME)(NK)(DI)(AK)(Id)(KY)(FX) | m*akvslekdkikf | serA | ||||||
M92-2 | (AM)(KL)(VX)(RS)(Le)(ME)(NK)(DI)(AK)(Id)(KY)(FX) | mlkremniady | glyA | ||||||
M93 | XXXXXXXXXXXX | ||||||||
M94 | MDQTYsL(Ei)XFLN | mdqtyslesfln | gdhA | ||||||
M95 | TAPSQVLKIRRP | m*tapsqvlkirrp | pyrC | ||||||
M96 | (PA)PDM(KL)LFAGNAT | mpdmklfagnat | prsA | ||||||
M97-1 | (Sm)(LA)(IL)(NE)(VT)(PK)(AIL)(GK)(KP)(DF)
(LKd)(PNl) | m*sllnvpagkdlp | ppa | ||||||
M97-2 | (Sm)(LA)(IL)(NE)(VT)(PK)(AIL)(GK)(KP)(DF)
(LKd)(PNl) | m*slintkikpfkn | ahpC | ||||||
M98 | MD(It)ISVALKR(hp)s | mdiisvalkrhs | nfnB | ||||||
M99 | SKIFEDNSLTIi | m*skifednslti | cysK | ||||||
M100 | SLNFLDFEQPIA | m*slnfldfeqpia | accA | ||||||
M101-1 | (At)(Ni)(LN)(KL)(AK)(VA)(IV)(PI)(VP)(AV)(GA)
(LG) | maaint*kvkkavipvagl | galU | ||||||
M101-2 | (At)(Ni)(LN)(KL)(AK)(VA)(IV)(PI)(VP)(AV)(GA)
(LG) | maain*tkvkkavipvag | galU | ||||||
M102-1 | (GM)(FG)(LF)(SL)(GS)(KG)(RK)(IR)(LI)(VL)
(TL)(GT) | mgflsgkrilvt | fabI | ||||||
M102-2 | (GM)(FG)(LF)(SL)(GS)(KG)(RK)(IR)(LI)(VL)
(TL)(GT) | m*gflsgkrilvtg | fabI | ||||||
M103 | (VA)TYPLP(Te)DGsrL | MNMKLKTLFAAAFAVVGFCSTAS
A*VTYPLPTDGSRL | ybiS | ||||||
M104 | MQQLQNIIETAF | mqqlqniietaf | dapD | ||||||
M105 | (As)VVASLKPVGFI | MKCYNITLLIFITIIGRIMLHKKTLL
FAALSAALWGGATQAADA*AVVASLK PVGFI | yebL | ||||||
M106 | (MSD)D(Ig)KV(At)V(Vf)GAMs | mkrnaktiiagmialaishtama*ddikvavvg
ams | livK | ||||||
M107-1 | (SM)(KE)(NI)(YK)(VH)(IT)(AD)(VP)(LA)(PQ)
(GX)(DK) | M*SKNYHIAVLPGD | leuB | ||||||
M107-2 | (SM)(KE)(NI)(YK)(VH)(IT)(AD)(VP)(LA)(PQ)
(GX)(DK) | NM | |||||||
M108 | TIKVGINGFGRI | m*tikvgingfgri | gapA | ||||||
M109-1 | (Akst)(AI)I(NE)(TG)K(VL)K(Ik)AV(IN) | m*aaintkvkkavi | galU | ||||||
M109-2 | (Akst)(AI)I(NE)(TG)K(VL)K(Ik)AV(IN) | NM | |||||||
M110-1 | (MX)(LM)(KL)(XK)(FX)(RF)(GR)(MG)(FM)(SF)
(LS)(DL) | mlkkfrgmfsnd | mreB | ||||||
M110-2 | (MX)(LM)(KL)(XK)(FX)(RF)(GR)(MG)(FM)(SF)
(LS)(DL) | mlkkfrgmfsn | mreB | ||||||
M111 | (Mra)KVAVLGAAGGI | mkvavlgaaggi | mdh | ||||||
M112 | MTLQqqIIKALg | mtlqqqiikalg | nadE | ||||||
M113 | (SAQ)GFYXKXFLKgl | m*sgfyhkhflkl | argI | ||||||
M114 | (AQ)Xk(Td)PLYEVXt(tl) | M*aqqtplyeqhtl | gcvT | ||||||
M115 | M(NI)PS(IV)I(NVD)(LY)taip | mers*mkpsvilykalp | yiaE | ||||||
M116 | (Ap)ENK(TD)LXIYNv | mtalnkkwlsglvagalmavsvgtla*aeqktl
hiynw | potF | ||||||
M117 | ARIIVVTSGKgg | m*ariivvtsgkgg | minD | ||||||
M118-1 | (AM)(QP)(TX)(PD)(ND)(IT)(LX)(IY)(VY)(EG)DE | mqtphilivede | arcA | ||||||
M118-2 | (AM)(QP)(TX)(PD)(ND)(IT)(LX)(IY)(VY)(EG)DE | MKKTAIAIAVALAGFATVAQA*A
PKDNTWYTGAK | ompA | ||||||
M119 | AVAANKRSVMTL | m*avaankrsvmtl | sspA | ||||||
M120 | AETIRFATEA(GS)Y | mkkvliaaliagfslsata*aetirfateasy | artI | ||||||
M121 | (SAmgd)ERYESLFA(Qg)LK | meryeslfaqlk | trpA | ||||||
M122 | A(GVL)(VI)PVAD(PV)(LV)QXR | m*svvpvadvlq | asnS | ||||||
M123 | ENLMQVYQ(Qg)A(Rg)L | mkkllpiliglslsgfsslsqa*enlmqvyqqarl | tolC | ||||||
M124-1 | M(LIV)(QKPV)X(RF)(EK)(EQ)(MG)(VA)R(VA)(IQ) | NM | |||||||
M124-2 | M(LIV)(QKPV)X(RF)(EK)(EQ)(MG)(VA)R(VA)(IQ) | NM | |||||||
M125 | (MS)VPVQ(Kg)P(Mr)YX(Dvd) | M*SVPVQHPMYIDG | aldA | ||||||
M126 | SFNTII(Dg)PnX(PYEK)t | m*sfntiidwnsct | hisD | ||||||
M127 | SQNVYQFIDLQR | m*sqnvyqfidlqr | gltD | ||||||
M128-1 | (Sq)(QS)(VN)(VD)(YI)(LGq)(VF)(IP)DL(QP)(RE) | M*SSVDILVPDLPE | sucB | ||||||
M128-2 | (Sq)(QS)(VN)(VD)(YI)(LGq)(VF)(IP)DL(QP)(RE) | M*SQNVYQFIDLQR | gltD | ||||||
M129 | SQQ(VLR)(GI)I(FGE)D(TG)Tl(Er) | m*sqqviifdttlr | leuA | ||||||
M130 | M(QG)Q(Gd)RPVL(dr)ALL | mqqrrpvrrall | purH | ||||||
M131 | iGTE(gy)XPq(qgi)XXg | NM | |||||||
M132 | (SA)(DE)FVYTMXRV(LI)(Ga) | m*aqfvytmhrvgk | yjjK | ||||||
M133 | sEL(Lr)NXsID(lv)X(lv) | mavnllkknslalvaslllaghvqa*tellnssyd
vsr | cysP | ||||||
M134 | (AM)(GM)QK(VG)VSI(gp)D(di)N | mkqkvvsigdin | kdsA | ||||||
M135 | MVTFsT(NI)pXXI | mvtfhtnhgdi | ppiB | ||||||
M136-1 | (As)(Ea)(Ke)(Rk)(Nr)(In)(Fi)(Lf)(Vl)(Gv)(Pg)(Mp) | mrfqfmscraslseaglsltnslsstekm*aekrn
iflvgpm | aroK | ||||||
M136-2 | (As)(Ea)(Ke)(Rk)(Nr)(In)(Fi)(Lf)(Vl)(Gv)(Pg)(Mp) | mrfqfmscraslseaglsltnslsstekm*aekrn
iflvgp | aroK | ||||||
M137 | (Sm)Q(Ei)N(QT)NRK(PS)FXL | mqegqnrktssl | dksA | ||||||
M138 | TTPTFDT(Ig)EAQ(ALgr) | m*ttptfdtieaqa | fklB | ||||||
M139 | SEALKILNNIRT | m*sealkilnnirt | hns | ||||||
M140 | SKTIATENAPAA | M*SKTIATENAPAA | yjgF | ||||||
M141 | (AMS)RHYEIVFMVXP | mrhyeivfmvhp | rpsF | ||||||
M142 | MRHYEIVFMVHP | mrhyeivfmvhp | rpsF | ||||||
M143 | MRHYEIVFMYHP | mrhyeivfmvhp | rpsF | ||||||
M144 | MNIRPLHDRVIV | mnirplhdrviv | mopB | ||||||
M145 | AYKHILIAVDLS | m*aykhiliavdls | uspA | ||||||
M146-1 | (ASM)(ND)(TV)(IK)(DKS)(MV)(TR)I(FNr)X(AV) | NM | |||||||
M146-2 | (ASM)(ND)(TV)(IK)(DKS)(MV)(TR)I(FNr)X(AV) | NM | |||||||
M147-1 | (AM)(ET)(SVLN)(FNq)(TQ)(TLV)(TV)(NL)(RK)
(PRY)(FRE)D | M*AESFTTTNRYFD | yifE | ||||||
M147-2 | (AM)(ET)(SVLN)(FNq)(TQ)(TLV)(TV)(NL)(RK)
(PRY)(FRE)D | NM | |||||||
M148 | ATYYSNDFRAGL | m*atyysndfragl | efp | ||||||
M149 | (AS)(Drh)NNTLY(Fi)YNX(It) | mkkwsrhllaagalalgmsaaha*ddnntlyf
ynwt | potD | ||||||
M150 | (Ms)IIVTGGAGFIG | miivtggagfig | rfaD | ||||||
M151 | APKDNTRYTGAK | mkktaiaiavalagfatvaqa*apkdntwytg
ak | ompA | ||||||
M152 | XXXXXXXXXXXX | tufA/B | |||||||
M153 | XXXXXXXXXXXX | tufA/B | |||||||
M154 | AEIYNKDGNKVD | mmkrnilavivpallvagtana*aeiynkdgn
kvd | ompF |
b) The observed N-terminal
amino acid sequence of the spot. A single upper case letter indicates
an unambiguous PTHaa signal in the cycle. A lower
case letter indicates that the PTHaa signal is close
to the level of background noise or lag. Parentheses indicate
that a cycle had two or more PTHaa signals. The order
of amino acids in parentheses is from strongest to weakest PTHaa
signals. An upper case "X" indicates no PTHaa
signal could be detected above the background lag. A lower case
"x" indicates instrument failure in the cycle and no
amino acid call. The symbol "XXXXXXXXXXXX" indicates
that no PTHaa sequence signal was detected above the
background lag during the entire sequencing run.
c) The observed protein
sequence compared to the amino terminal sequence of the matching
conceptual protein in the E. coli genome. The predicted
sequence is shown and the observed sequence is in bold. An "*"
in the protein sequence shows the observed start site based on
the N-terminal sequence tag. An underlined amino acid indicates
a discrepancy between the predicted sequence and the observed
sequence tag. The predicted amino acid is shown. For query-sequence
matching the internal region of an E. coli gene, the numbers
of amino acids between the predicted N- and C- termini of the
conceptual protein that match the start and stop sites of the
sequence tag are shown in parentheses.
d) The E. coli
gene symbol assigned to the ORF identified by the protein sequence.
The symbol "NM" indicates that the query string was
used to search the database, but no significant match was found.
The table is sorted alphabetically by loci names.
e) The predicted isoelectric
point calculated from the conceptual sequence of the protein.
f) The observed isoelectric
point of the protein calculated from the (x) coordinates of the
spot.
g) The predicted mass
calculated from the conceptual sequence of the protein. The units
are kDa.
h) The observed mass
of the protein calculated from the (y) coordinates of the spot.
The units are kDa.
i) The observed abundance
on the master 2-DE gel.
j) The estimated cellular abundance of the protein species. The units are molecules/cell.