Supplementary Table I -- Candidates

Supplementary Table I

Identifiers
miR-#
Prediction
Algorithm
Positive by
PCR Assay
candidate-1
worm:chr_III-CIG06960|293886|2|95|24|63.1
-
CDC
candidate-2
worm:chr_II-CIG03926|893|1|95|26.7|49.4
-
CDC
candidate-3
worm:chr_X-CIG14229|1698|2|95|25.8|48.4
-
CDC
candidate-4
worm:chr_III-CIG05351|13984|2|94|23.9|55.3
-
CDC
candidate-5
worm:chr_X-CIG14123|1009|1|90|24.2|55.5
-
CDC
candidate-6
worm:chr_X-CIG14154|1989|1|94|29.5|47.8
-
CDC
candidate-7
worm:chr_I-CIG01573|261315|2|95|26.7|56.8
-
Homology
candidate-8
worm:chr_V-CIG13081|1006|2|91|26.9|53.8
-
Homology
candidate-9
worm:chr_V-CIG11791|7077|1|95|27.5|42.1
cp-mir-268
Homology
CDC
X
candidate-10
worm:chr_V-CIG13285|3560|2|94|31.8|44.6
-
Homology
candidate-11
worm:chr_V-CIG11770|808|2|86|23.6|55.8
-
Homology
candidate-12
worm:chr_V-CIG11271|3935|1|95|27.1|62.1
-
CDH
candidate-13
worm:chr_III-CIG06960|55409|2|95|27.4|49.4
-
Homology
candidate-14
worm:chr_II-CIG04864|1193|1|95|31.1|45.2
-
CDC
candidate-15
worm:chr_II-CIG04929|227142|2|93|24.6|49.4
-
Homology
candidate-16
worm:chr_III-CIG05549|1472|1|91|27.8|62.6
-
CDC
candidate-17
worm:chr_I-CIG00623|4060|2|93|30.3|41.9
miR-1
CDC
CDH
candidate-18
worm:chr_III-CIG06249|48658|1|94|27.7|53.1
-
CDH
candidate-19
worm:chr_IV-CIG07179|484|1|94|29.7|43.6
cp-mir-269
Homology
X
candidate-20
worm:chr_III-CIG06934|1620|1|90|26.1|62.2
-
CDC
candidate-21
worm:chr_III-CIG06085|14621|1|94|35.1|37.2
-
Homology
candidate-22
worm:chr_I-CIG02158|1042940|2|94|33.8|45.7
-
Homology
candidate-23
worm:chr_V-CIG13462|27427|1|93|23.8|58
-
Homology
candidate-24
worm:chr_II-CIG05073|83169|1|92|27.7|52.1
-
Homology
candidate-25
worm:chr_IV-CIG09195|1871|2|95|26|53.6
-
Homology
candidate-26
worm:chr_IV-CIG07414|1167|2|95|27.1|54.7
-
CDC
candidate-27
worm:chr_I-CIG02158|614309|2|95|33.6|47.3
-
Homology
candidate-28
worm:chr_X-CIG14503|40845|2|95|27.6|45.2
-
CDC
candidate-29
worm:chr_X-CIG15377|4820|1|94|27.3|44.6
-
CDC
candidate-30
worm:chr_X-CIG14451|9241|2|95|24.9|53.6
-
CDC
candidate-31
worm:chr_V-CIG09786|25482|2|93|24.6|58
-
CDH
candidate-32
worm:chr_IV-CIG08730|4807|1|95|23.6|50.5
-
CDH
candidate-33
worm:chr_II-CIG05073|80834|1|95|31.1|38.9
-
Homology
candidate-34
worm:chr_V-CIG13448|3324|2|95|27.8|45.2
-
Homology
candidate-35
worm:chr_III-CIG05351|202309|1|94|34.3|34
-
Homology
candidate-36
worm:chr_I-CIG02235|172680|1|94|24.6|58.5
-
CDC
candidate-37
worm:chr_II-CIG05171|93048|1|94|26.4|58.5
-
Homology
candidate-38
worm:chr_V-CIG10375|4093|2|95|32.5|48.4
-
Homology
candidate-39
worm:chr_III-CIG06249|88729|1|94|25.7|55.3
-
CDC
candidate-40
worm:chr_I-CIG02172|70356|1|94|33.5|48.9
-
CDC
candidate-41
worm:chr_IV-CIG08650|878|1|95|27.6|53.6
-
Homology
candidate-42
worm:chr_X-CIG14107|92|2|94|24.5|47.8
-
Homology
candidate-43
worm:chr_X-CIG14001|1128|2|93|29.6|40.8
-
Homology
candidate-44
worm:chr_V-CIG13700|2680|2|95|27.7|53.6
-
Homology
candidate-45
worm:chr_X-CIG16178|3640|2|92|26|52.1
-
Homology
candidate-46
worm:chr_V-CIG10732|151|1|94|24.3|58.5
-
CDC
candidate-47
worm:chr_II-CIG05171|262995|2|93|25|56.9
-
CDC
candidate-48
worm:chr_I-CIG01573|382469|1|94|31.1|37.2
-
Homology
candidate-49
worm:chr_X-CIG14527|9758|1|92|27|51
-
Homology
candidate-50
worm:chr_V-CIG09580|4107|2|94|25.8|51
-
CDH
candidate-51
worm:chr_IV-CIG09116|2525|2|86|25.7|50
cp-mir-265
Homology
candidate-52
worm:chr_I-CIG01379|26804|1|92|29.7|35.8
-
CDH
candidate-53
worm:chr_I-CIG01919|286|2|94|27.3|50
-
Homology
candidate-54
worm:chr_V-CIG09663|43197|1|94|25|52.1
-
CDC
candidate-55
worm:chr_X-CIG15595|5338|1|94|27.5|43.6
-
Homology
candidate-56
worm:chr_V-CIG11415|2623|1|94|25|39.3
-
Homology
candidate-57
worm:chr_IV-CIG08533|1033|1|95|25.3|45.2
-
CDC
candidate-58
worm:chr_V-CIG13188|799|1|95|24.7|57.8
-
Homology
candidate-59
worm:chr_II-CIG04291|116741|1|94|30.5|45.7
-
Homology
candidate-60
worm:chr_III-CIG06960|206491|2|90|25.2|61.1
-
Homology
candidate-61
worm:chr_III-CIG05240|4160|1|95|34|33.6
-
Homology
candidate-62
worm:chr_II-CIG04967|189965|2|93|24.2|53.7
-
CDC
candidate-63
worm:chr_IV-CIG07350|1929|1|95|24.1|46.3
-
Homology
candidate-64
worm:chr_I-CIG01573|388973|2|92|34.4|42.3
-
CDC
candidate-65
worm:chr_IV-CIG09013|40969|1|95|24.5|61
-
CDC
candidate-66
worm:chr_X-CIG14184|1662|1|94|38.6|41.4
cp-mir-266
Homology
X
candidate-67
worm:chr_IV-CIG09013|200931|2|93|26.5|53.7
-
CDC
candidate-68
worm:chr_X-CIG13965|8584|2|94|25.5|59.5
-
CDC
candidate-69
worm:chr_I-CIG01647|3860|2|91|34.6|39.5
-
Homology
candidate-70
worm:chr_I-CIG01925|37091|1|93|27.1|52.6
-
Homology
candidate-71
worm:chr_II-CIG04843|124742|2|94|23.5|57.4
-
CDC
candidate-72
worm:chr_II-CIG03952|786|2|93|25.8|46.2
miR-57
CDH
candidate-73
worm:chr_III-CIG07015|1597|2|94|26.2|54.2
-
Homology
candidate-74
worm:chr_III-CIG05570|1103|2|95|33.7|48.4
-
Homology
candidate-75
worm:chr_II-CIG04941|161837|1|92|24.7|51
-
Homology
candidate-76
worm:chr_III-CIG07015|1634|2|95|26.7|62.1
-
Homology
candidate-77
worm:chr_V-CIG13146|193|1|90|29.6|60
-
CDH
candidate-78
worm:chr_I-CIG02279|124|1|94|24.7|52.1
-
CDC
candidate-79
worm:chr_II-CIG03001|909|2|95|29.5|51.5
-
CDC
candidate-80
worm:chr_IV-CIG08364|510|1|92|26.6|43.4
-
CDC
candidate-81
worm:chr_V-CIG10942|5369|2|94|29|42.5
-
Homology
candidate-82
worm:chr_V-CIG13503|277570|2|95|30.2|47.3
-
Homology
candidate-83
worm:chr_X-CIG14044|350|1|94|28|36.1
-
Homology
candidate-84
worm:chr_II-CIG05171|147069|2|95|23.7|55.7
-
Homology
candidate-85
worm:chr_I-CIG02031|12584|1|94|23.9|54.2
-
CDC
candidate-86
worm:chr_I-CIG02158|1045803|1|94|38.4|44.6
-
Homology
candidate-87
worm:chr_II-CIG04843|129476|1|94|40.5|41.4
-
Homology
candidate-88
worm:chr_X-CIG14737|15185|1|95|26.2|53.6
-
CDC
candidate-89
worm:chr_II-CIG03705|2206|1|95|24.3|53.6
-
CDC
candidate-90
worm:chr_V-CIG12095|7878|2|93|23.9|52.6
-
CDC
candidate-91
worm:chr_I-CIG01924|20979|2|95|24.2|58.9
cp-mir-272
Homology
X
candidate-92
worm:chr_V-CIG12100|1065|1|94|25.9|48.9
-
CDC
candidate-93
worm:chr_II-CIG03210|95|1|94|27.7|47.8
-
Homology
candidate-94
worm:chr_II-CIG04291|26396|2|94|25|51
-
Homology
candidate-95
worm:chr_X-CIG14058|24544|2|94|24.6|51
miR-34
CDC
CDH
candidate-96
worm:chr_V-CIG10234|1381|1|95|27.9|53.6
-
Homology
candidate-97
worm:chr_II-CIG02559|2278|1|94|32.3|39.3
-
Homology
candidate-98
worm:chr_V-CIG10195|18508|2|95|25.1|60
-
CDC
CDH
candidate-99
worm:chr_III-CIG05351|202309|2|94|34.3|34
-
Homology
candidate-100
worm:chr_II-CIG04929|143297|2|93|25.4|50.5
-
CDH
candidate-101
worm:chr_IV-CIG09419|878448|1|95|23.7|58.9
-
CDC
candidate-102
worm:chr_IV-CIG09013|41490|1|94|25|60.6
-
CDC
candidate-103
worm:chr_IV-CIG08639|2048|1|95|30.3|47.3
-
Homology
candidate-104
worm:chr_X-CIG14043|5129|1|93|24.1|58
cp-mir-264
CDH
X
candidate-105
worm:chr_X-CIG14877|1589|2|95|24.7|44.2
-
CDC
candidate-106
worm:chr_X-CIG16052|6581|2|94|26|48.9
-
Homology
candidate-107
worm:chr_I-CIG00618|3340|2|94|25.1|58.5
-
Homology
candidate-108
worm:chr_III-CIG05983|14077|1|95|26.1|60
-
CDH
candidate-109
worm:chr_III-CIG05360|32051|2|94|34.9|51
-
Homology
candidate-110
worm:chr_V-CIG13503|264600|1|95|28.9|63.1
-
CDH
candidate-111
worm:chr_II-CIG04892|375952|2|95|28.4|40
-
Homology
candidate-112
worm:chr_I-CIG02158|80941|2|94|36.8|42.5
-
Homology
candidate-113
worm:chr_X-CIG14692|358|2|89|28.2|42.7
-
Homology
candidate-114
worm:chr_II-CIG04291|116862|2|94|30.3|43.6
-
Homology
candidate-115
worm:chr_II-CIG04809|3463|2|95|26.2|50.5
miR-44
CDC
candidate-116
worm:chr_V-CIG10553|650|2|93|25.7|48.3
-
CDC
candidate-117
worm:chr_V-CIG13600|6652|1|95|28.1|36.8
-
Homology
candidate-118
worm:chr_I-CIG02158|153212|2|94|29.6|42.5
-
Homology
candidate-119
worm:chr_II-CIG02360|389|2|94|33.4|48.9
-
CDH
candidate-120
worm:chr_V-CIG10679|1449|1|94|27.1|51
-
Homology
candidate-121
worm:chr_I-CIG01266|2225|1|94|25.5|41.4
miR-79
CDH
CDC
candidate-122
worm:chr_V-CIG09755|3788|1|95|23.7|62.1
-
CDC
candidate-123
worm:chr_IV-CIG07725|3630|1|93|29.7|53.7
mir-228
CDH
CDC
X
candidate-124
worm:chr_IV-CIG08025|2898|2|94|23.6|59.5
-
CDC
candidate-125
worm:chr_II-CIG02307|1596|1|89|24.1|55
-
CDC
candidate-126
worm:chr_X-CIG13809|4436|1|92|31.1|46.7
-
CDH
candidate-127
worm:chr_X-CIG15932|554|2|95|24.7|51.5
-
CDH
candidate-128
worm:chr_III-CIG05351|8058|2|93|24.2|56.9
-
CDC
candidate-129
worm:chr_X-CIG16076|259|1|94|24.1|57.4
-
Homology
candidate-130
worm:chr_I-CIG02048|11246|2|95|34.1|40
-
Homology
candidate-131
worm:chr_X-CIG15851|6808|2|85|28.3|44.7
let-7
CDC
CDH
candidate-132
worm:chr_I-CIG01286|1870|2|94|23.6|52.1
-
CDC
candidate-133
worm:chr_V-CIG13367|6068|2|95|26.5|57.8
-
Homology
candidate-134
worm:chr_I-CIG02172|134129|2|94|30|41.4
-
Homology
candidate-135
worm:chr_II-CIG03765|297|1|93|27.9|40.8
-
CDH
CDC
candidate-136
worm:chr_IV-CIG08556|132|1|95|30|51.5
-
Homology
candidate-137
worm:chr_I-CIG01379|519115|2|92|24.7|41.3
-
CDC
candidate-138
worm:chr_I-CIG02158|1042940|1|94|33.8|45.7
-
Homology
candidate-139
worm:chr_V-CIG13352|819|2|95|32.3|53.6
-
Homology
candidate-140
worm:chr_I-CIG01926|22473|1|95|24.8|63.1
-
CDC
candidate-141
worm:chr_I-CIG02158|153266|2|92|33.2|41.3
-
Homology
candidate-142
worm:chr_I-CIG02158|504109|2|95|35.4|44.2
-
Homology
candidate-143
worm:chr_V-CIG09663|42123|1|94|24.2|56.3
-
CDC
candidate-144
worm:chr_V-CIG09519|384|2|95|23.7|48.4
-
Homology
candidate-145
worm:chr_III-CIG06995|452076|1|94|38.9|58.5
-
CDH
candidate-146
worm:chr_IV-CIG09211|197941|2|93|31.2|40.8
-
Homology
candidate-147
worm:chr_III-CIG06542|5908|1|95|26.2|61
-
CDC
CDH
candidate-148
worm:chr_V-CIG13621|1198|2|95|29.5|49.4
-
Homology
candidate-149
worm:chr_V-CIG12269|7028|2|95|29.2|48.4
-
CDC
candidate-150
worm:chr_I-CIG01573|308036|2|91|24.1|50.5
-
Homology
candidate-151
worm:chr_II-CIG04892|404756|2|93|29.2|38.7
cp-mir-267
Homology
X
candidate-152
worm:chr_X-CIG15590|5299|1|88|29.1|43.1
-
Homology
candidate-153
worm:chr_X-CIG15499|1686|2|93|26.6|56.9
-
CDC
candidate-154
worm:chr_I-CIG02172|21883|2|94|31.6|56.3
-
CDH
candidate-155
worm:chr_V-CIG09896|8209|1|94|24.5|53.1
-
CDC
CDH
candidate-156
worm:chr_V-CIG13588|1067|2|91|25|56
-
Homology
candidate-157
worm:chr_I-CIG02158|1043320|2|93|34.3|46.2
-
Homology
candidate-158
worm:chr_V-CIG11380|5016|2|94|28.3|47.8
-
CDC
candidate-159
worm:chr_I-CIG01376|7207|1|95|27.7|60
-
CDC
candidate-160
worm:chr_I-CIG01819|9066|2|94|28|51
-
Homology
candidate-161
worm:chr_IV-CIG07347|47453|2|95|28.1|54.7
cp-mir-270
Homology
X
candidate-162
worm:chr_X-CIG14020|5958|2|94|36.2|35.1
-
Homology
candidate-163
worm:chr_I-CIG00669|9583|1|92|38.3|34.7
-
Homology
candidate-164
worm:chr_III-CIG05238|997|2|95|34|35.7
-
Homology
candidate-165
worm:chr_X-CIG14228|33234|1|93|24.1|59.1
-
CDC
candidate-166
worm:chr_V-CIG13576|1068633|2|94|30.8|41.4
-
Homology
candidate-167
worm:chr_III-CIG05298|7110|2|92|27|48.9
-
Homology
candidate-168
worm:chr_II-CIG02776|11078|1|94|23.9|62.7
-
CDH
candidate-169
worm:chr_V-CIG11706|11863|1|95|27.9|52.6
-
CDH
candidate-170
worm:chr_III-CIG05549|1471|2|93|24.7|62.3
-
CDC
candidate-171
worm:chr_V-CIG13503|230804|1|95|27.1|46.3
-
Homology
candidate-172
worm:chr_I-CIG01273|602|2|95|27.9|43.1
miR-2
CDH
candidate-173
worm:chr_II-CIG04892|91348|2|94|35.9|53.1
-
Homology
candidate-174
worm:chr_IV-CIG07790|6386|1|94|25.6|55.3
-
CDH
candidate-175
worm:chr_II-CIG02473|1727|2|95|23.8|58.9
-
CDH
candidate-176
worm:chr_I-CIG01167|7134|2|86|23.7|59.3
-
CDC
CDH
candidate-177
worm:chr_IV-CIG07335|4176|2|95|23.6|42.1
-
Homology
candidate-178
worm:chr_II-CIG04967|200900|1|95|31.8|42.1
-
Homology
candidate-179
worm:chr_III-CIG06995|553255|1|95|24.9|50.5
-
Homology
candidate-180
worm:chr_II-CIG04967|269151|1|94|26|53.1
-
Homology
candidate-181
worm:chr_V-CIG13600|6133|1|95|28.3|41
-
Homology
candidate-182
worm:chr_X-CIG15499|2180|2|94|26.9|52.1
-
CDC
candidate-183
worm:chr_IV-CIG09515|840|1|94|25|61.7
-
CDC
candidate-184
worm:chr_III-CIG05351|11784|2|95|24.9|61
-
CDC
candidate-185
worm:chr_IV-CIG09211|64753|1|94|26.1|59.5
-
CDC
candidate-186
worm:chr_IV-CIG07211|569|1|90|39.3|45.5
-
Homology
candidate-187
worm:chr_X-CIG16151|5707|2|94|26.9|43.6
-
CDH
candidate-188
worm:chr_X-CIG14058|24543|1|93|28.6|52.6
-
CDC
CDH
candidate-189
worm:chr_I-CIG02171|6224|1|93|23.7|53.7
-
CDC
candidate-190
worm:chr_II-CIG03765|296|2|95|28.4|41
mir-236
CDC
Homology
CDH
X
candidate-191
worm:chr_II-CIG04809|3463|1|95|28.5|50.5
-
CDC
candidate-192
worm:chr_II-CIG02569|961|2|95|24.9|48.4
-
CDH
candidate-193
worm:chr_I-CIG00893|3252|1|95|23.6|58.9
-
CDC
candidate-194
worm:chr_I-CIG00498|2412|2|95|27.3|52.6
-
CDC
candidate-195
worm:chr_IV-CIG08488|1336|1|95|35.6|50.5
-
Homology
candidate-196
worm:chr_III-CIG05370|381|1|93|29.1|39.7
-
Homology
candidate-197
worm:chr_V-CIG13576|787419|2|94|31.7|46.8
-
Homology
candidate-198
worm:chr_V-CIG09740|6064|2|94|27.1|41.4
-
Homology
candidate-199
worm:chr_IV-CIG09419|830237|2|84|26.1|46.4
-
CDH
candidate-200
worm:chr_I-CIG01573|286329|1|93|25.4|59.1
-
Homology
candidate-201
worm:chr_III-CIG06542|5901|2|93|25.9|60.2
-
CDC
candidate-202
worm:chr_II-CIG04197|2695|2|95|23.8|48.4
-
CDH
candidate-203
worm:chr_I-CIG02235|76265|2|92|23.7|63
-
CDC
candidate-204
worm:chr_III-CIG05412|74871|2|95|24.5|62.1
-
CDC
candidate-205
worm:chr_IV-CIG07313|3973|1|95|32.8|51.5
-
CDH
candidate-206
worm:chr_X-CIG14136|390|1|95|25.6|55.7
cp-mir-271
Homology
X
candidate-207
worm:chr_II-CIG02584|1029|1|94|24|39.3
-
Homology
candidate-208
worm:chr_III-CIG05351|212367|1|94|40|36.1
-
Homology
candidate-209
worm:chr_II-CIG05171|301674|1|94|29.8|45.7
cp-mir-273
Homology
X
candidate-210
worm:chr_II-CIG03622|1568|2|81|29|35.8
miR-60
CDC
candidate-211
worm:chr_II-CIG02875|385|2|95|24.7|58.9
-
Homology
candidate-212
worm:chr_I-CIG02158|1039850|1|95|39.6|42.1
-
Homology
candidate-213
worm:chr_IV-CIG09289|48080|1|93|31.7|36.5
-
Homology
candidate-214
worm:chr_X-CIG14184|1662|2|94|39.9|41.4
-
Homology
candidate-215
worm:chr_V-CIG09663|42255|1|92|27.4|54.3
-
Homology
candidate-216
worm:chr_II-CIG04817|2568|2|95|36.2|46.3
-
Homology
candidate-217
worm:chr_II-CIG05073|21363|1|95|28.5|42.1
-
CDC
Homology
candidate-218
worm:chr_IV-CIG07725|3630|2|93|30.5|53.7
-
CDH
CDC
candidate-219
worm:chr_IV-CIG09211|122779|1|94|29.9|44.6
-
CDH
candidate-220
worm:chr_IV-CIG08488|1382|1|95|30.9|50.5
-
Homology
candidate-221
worm:chr_II-CIG02855|312|1|95|37.5|54.7
-
Homology
candidate-222
worm:chr_V-CIG13503|174387|2|95|24.6|55.7
-
CDC