AlignACE version 2.2 July 7, 1998 /home/amcguire/bin/alignACE -i098_ecoli_mtub_300.orf -o098_ecoli_mtub_300.ace -a/home/amcguire/genomes/ORF_ecoli.txt -z/home/amcguire/genomes/ecoli.fna -g0.58 -x5 -e Parameter values: expect = 5 ncols = 10 npass = 1000 maxnpass = 100 nruns = 1000 maxnruns = 100 repeat = 15 maxreps = 3 nread = 500 ncycles = 1 fragment = 1 psfact = 0.1 gcback = 0.58 maxlen = 30 weight = 0.8 exclude = 1 Input sequences: #1 phoB 189 positive response regulator for pho regulon, sensor is PhoR (or CreC) #2 phoR 57 positive and negative sensor protein for pho regulon #3 cpxR 146 transcriptional regulator in 2-component system #4 Rv0488 300 hypothetical protein Rv0488 #5 gpm 156 gpm #6 senX3 173 senX3 #7 regX3 227 regX3 Motif number 1 CGCCTTGCTCATCGGACGCAGAGC 2 1 1 CCTTGCCTCG 0.981208 -57 AGAAATCATAAGCCCTGCTCTGCGTCCGATGAGC 2 17 0 ACCTGCCGCG 0.954519 -41 CCAACTCCTTCTCATCGCGCTGCGC 4 2 0 CCTCGCCGCG 0.990148 -299 CGAGCCCGACGACGATGCAGAGCGCGCAGCGCGA 4 46 1 GCATGCGGCG 0.98565 -255 CCAACTCCTTCTCATCGCGCTGCGCGCTCTGCAT 4 60 0 CCTCGCCGCG 0.990148 -241 CGAGCCCGACGACGATGCAGAGCGCGCAGCGCGA 4 104 1 GCATGCGGCG 0.98565 -197 AGTGCTATTTCTCATCGCGCTGCGCGCTCTGCAT 4 118 0 CCTCGCCGCG 0.990148 -183 AGCGCCACCAGCCCATCACCGGCGGGCGTCTTGA 4 160 0 GCATCACGCG 0.797679 -141 CACCTGAAGAGGCACAGCGGAACGCTAAACCATC 4 259 0 GCCAGCGACG 0.890773 -42 GTTACGGTGCCGACCACCTCGGCGGTATGAACGC 5 54 1 CACACCCGCG 0.827181 -103 GCGGTATGAACGCGCTGCGCAGCGGACCGAGGAG 5 75 1 CCCTGCCGCG 0.588801 -82 CACGCACTCCCGCACTCCTCATCGTGGACCAAAA 5 119 0 CCCTCCCTCG 0.979947 -38 TGTTTGAGATCCCACCTGCCGGCGGTTTCGGCGG 6 12 1 CCCCTGCGCG 0.777816 -162 CACACACTACGCCACAGCTGTTCGGTTACCGTTC 6 87 0 GCCAGCGTCG 0.982671 -87 GGTGAACGTCGCCCTAGCGCGGCAAGGCCAAAAT 6 130 0 GCTAGCCGCA 0.955838 -44 CTGCGCCGACGACGATGCAGAGCGTAGCGATGAG 7 12 1 GCATGCGGCG 0.98565 -216 GCGGGTGGTGCCCCCACCTCATCGCTACGCTCTG 7 29 0 CCCACCCTCG 0.991084 -199 TCATCAGCGCCACTCTCCCCCGCAAGCGGGTGGT 7 54 0 CCCTCCCGCA 0.990471 -174 CATCGTCGTCGGCGCAGGTCATCAGCGCCACTCT 7 72 0 GCCAGGCTCA 0.811416 -156 CTGCGCCGACGACGATGCAGAGCGTAGCGATGAG 7 89 1 GCATGCGGCG 0.98565 -139 GCGGGTGGTGCCCCCACCTCATCGCTACGCTCTG 7 106 0 CCCACCCTCG 0.991084 -122 TCATCAGCGCCACTCTCCCCCGCAAGCGGGTGGT 7 131 0 CCCTCCCGCA 0.990471 -97 CATCGTCGTCGGCGCAGGTCATCAGCGCCACTCT 7 149 0 GCCAGGCTCA 0.811416 -79 CTGCGCCGACGACGATGCAGAGCGTAGCGATGAG 7 166 1 GCATGCGGCG 0.98565 -62 GCGGGTGGTGCCCCCACCTCATCGCTACGCTCTG 7 183 0 CCCACCCTCG 0.991084 -45 CAGCGCCACTCTCCCCCGCAAGCGGGTGGT 7 208 0 CCCTCCCGCA 0.990471 -20 * * **** * *** Masking position 13 Map Score: 68.0382 Number of sites scoring better than the average of aligned sites = 3231 Number in coding regions = 3112 Number in noncoding regions = 119 Number of orfs with sites within 600 bp upstream = 118 Fraction of orfs with sites within 600 bp upstream = 0.0189528 Motif number 2 CTTGCTCATCGGACGCAGAGCAGGGCTTAT 2 14 1 GGACGCAGAG 0.906845 -44 CGCGATTCAACGATAGAGAGTTTACGATTC 3 32 1 CGATAGAGAG 0.683841 -115 TAAATACCTCCGAGGCAGAAATTACGTCAT 3 123 0 CGAGGCAGAA 0.939776 -24 GCGGTTAGGTCGAGCCCGACGACGATGCAG 4 36 1 CGAGCCCGAC 0.956527 -265 AGCCCGACGACGATGCAGAGCGCGCAGCGC 4 48 1 CGATGCAGAG 0.99199 -253 GCGGTTAGGTCGAGCCCGACGACGATGCAG 4 94 1 CGAGCCCGAC 0.956527 -207 AGCCCGACGACGATGCAGAGCGCGCAGCGC 4 106 1 CGATGCAGAG 0.99199 -195 GGCAACGAAGCCGACAAACACCTGA 4 286 0 CGAAGCCGAC 0.950731 -15 CCGGCCGTTACGGTGCCGACCACCTCGGCG 5 48 1 CGGTGCCGAC 0.991449 -109 TATGAACGCGCTGCGCAGCGGACCGAGGAG 5 79 1 CTGCGCAGCG 0.785303 -78 CCTTGCCGCGCTAGGGCGACGTTCACCGGA 6 137 1 CTAGGGCGAC 0.926654 -37 CCTGCGCCGACGACGATGCAG 7 2 1 CTGCGCCGAC 0.966662 -226 GCGCCGACGACGATGCAGAGCGTAGCGATG 7 14 1 CGATGCAGAG 0.99199 -214 CACCCGCTTGCGGGGGAGAGTGGCGCTGAT 7 56 1 CGGGGGAGAG 0.987661 -172 CGCTGATGACCTGCGCCGACGACGATGCAG 7 79 1 CTGCGCCGAC 0.966662 -149 GCGCCGACGACGATGCAGAGCGTAGCGATG 7 91 1 CGATGCAGAG 0.99199 -137 CACCCGCTTGCGGGGGAGAGTGGCGCTGAT 7 133 1 CGGGGGAGAG 0.987661 -95 CGCTGATGACCTGCGCCGACGACGATGCAG 7 156 1 CTGCGCCGAC 0.966662 -72 GCGCCGACGACGATGCAGAGCGTAGCGATG 7 168 1 CGATGCAGAG 0.99199 -60 CACCCGCTTGCGGGGGAGAGTGGCGCTG 7 210 1 CGGGGGAGAG 0.987661 -18 ********** Masking position 8 Map Score: 52.4362 Number of sites scoring better than the average of aligned sites = 1267 Number in coding regions = 1218 Number in noncoding regions = 49 Number of orfs with sites within 600 bp upstream = 53 Fraction of orfs with sites within 600 bp upstream = 0.00851269 Motif number 3 CGCCTTGCTCATCGGACGCAGA 2 1 1 CGCCTGCTCT 0.843699 -57 TGTTTTACACCCCCTGACGCATGTTTGCAGCC 3 63 0 CCCCTACGCT 0.799458 -84 TCGACCTAACCGCCCAACTCCTTCTCATCGCG 4 17 0 CGCCCACTCT 0.981701 -284 CATCGCGCTGCGCGCTCTGCATCGTCGTCGGG 4 50 0 CGCGCCTGCT 0.879927 -251 TCGACCTAACCGCCCAACTCCTTCTCATCGCG 4 75 0 CGCCCACTCT 0.981701 -226 CATCGCGCTGCGCGCTCTGCATCGTCGTCGGG 4 108 0 CGCGCCTGCT 0.879927 -193 GAGGTCAAGACGCCCGCCGGTGATGGGCTGGT 4 156 1 CGCCCCCGGG 0.950083 -145 GGGGTGAGCGCCACCAGCCCATCACCGGCGGG 4 168 0 CCACCGCCCT 0.721762 -133 GGGCTGGTGGCGCTCACCCCGTTCCGGACTCA 4 180 1 CGCTCCCCCT 0.987948 -121 GTTACGGTGCCGACCACCTCGGCGGTATGAAC 5 54 1 CGACCCCTCG 0.945334 -103 CACGCACTCCCGCACTCCTCATCGTGGACCAA 5 121 0 CGCACCCTCT 0.96071 -36 GCGGGTGGTGCCCCCACCTCATCGCTACGCTC 7 31 0 CCCCCCCTCT 0.995611 -197 GAGGTGGGGGCACCACCCGCTTGCGGGGGAGA 7 43 1 CACCACCGCT 0.969578 -185 TCATCAGCGCCACTCTCCCCCGCAAGCGGGTG 7 56 0 CACTCCCCCG 0.950201 -172 GCGGGTGGTGCCCCCACCTCATCGCTACGCTC 7 108 0 CCCCCCCTCT 0.995611 -120 GAGGTGGGGGCACCACCCGCTTGCGGGGGAGA 7 120 1 CACCACCGCT 0.969578 -108 TCATCAGCGCCACTCTCCCCCGCAAGCGGGTG 7 133 0 CACTCCCCCG 0.950201 -95 GCGGGTGGTGCCCCCACCTCATCGCTACGCTC 7 185 0 CCCCCCCTCT 0.995611 -43 GAGGTGGGGGCACCACCCGCTTGCGGGGGAGA 7 197 1 CACCACCGCT 0.969578 -31 CAGCGCCACTCTCCCCCGCAAGCGGGTG 7 210 0 CACTCCCCCG 0.950201 -18 ***** **** * Masking position 1 Map Score: 43.0972 Number of sites scoring better than the average of aligned sites = 1546 Number in coding regions = 1435 Number in noncoding regions = 111 Number of orfs with sites within 600 bp upstream = 106 Fraction of orfs with sites within 600 bp upstream = 0.0170254 Motif number 4 AACATGCGTCAGGGGGTGTAAAACAACGTA 3 70 1 AGGGGGTGTA 0.696724 -77 CGCGATGAGAAGGAGTTGGGCGGTTAGGTC 4 17 1 AGGAGTTGGG 0.950439 -284 CGCGATGAGAAGGAGTTGGGCGGTTAGGTC 4 75 1 AGGAGTTGGG 0.950439 -226 CCCGCCGGTGATGGGCTGGTGGCGCTCACC 4 168 1 ATGGGCTGGT 0.857997 -133 TGAGTCCGGAACGGGGTGAGCGCCACCAGC 4 182 0 ACGGGGTGAG 0.958556 -119 GTTCATACCGCCGAGGTGGTCGGCACCGTA 5 56 0 CCGAGGTGGT 0.888886 -101 CGAAACCGCCGGCAGGTGGGATCTCAAACA 6 12 0 GGCAGGTGGG 0.960046 -162 CGGCGGTTTCGGCGGCTGATGGTGTGCTTT 6 31 1 GGCGGCTGAT 0.500425 -143 GAGCGTAGCGATGAGGTGGGGGCACCACCC 7 31 1 ATGAGGTGGG 0.97682 -197 CTCCCCCGCAAGCGGGTGGTGCCCCCACCT 7 44 0 AGCGGGTGGT 0.984995 -184 CACCCGCTTGCGGGGGAGAGTGGCGCTGAT 7 56 1 CGGGGGAGAG 0.942934 -172 GAGCGTAGCGATGAGGTGGGGGCACCACCC 7 108 1 ATGAGGTGGG 0.97682 -120 CTCCCCCGCAAGCGGGTGGTGCCCCCACCT 7 121 0 AGCGGGTGGT 0.984995 -107 CACCCGCTTGCGGGGGAGAGTGGCGCTGAT 7 133 1 CGGGGGAGAG 0.942934 -95 GAGCGTAGCGATGAGGTGGGGGCACCACCC 7 185 1 ATGAGGTGGG 0.97682 -43 CTCCCCCGCAAGCGGGTGGTGCCCCCACCT 7 198 0 AGCGGGTGGT 0.984995 -30 CACCCGCTTGCGGGGGAGAGTGGCGCTG 7 210 1 CGGGGGAGAG 0.942934 -18 ********** Masking position 5 Map Score: 30.5659 Number of sites scoring better than the average of aligned sites = 851 Number in coding regions = 770 Number in noncoding regions = 81 Number of orfs with sites within 600 bp upstream = 80 Fraction of orfs with sites within 600 bp upstream = 0.0128493 Motif number 5 CCAACTCCTTCTCATCGCGCTGCGC 4 5 0 CTCATCGGCT 0.98388 -296 CTGCGCGCTCTGCATCGTCGTCGGGCTCGAC 4 44 0 TGCATCGCGT 0.996541 -257 CCAACTCCTTCTCATCGCGCTGCGCGCTCTG 4 63 0 CTCATCGGCT 0.98388 -238 CTGCGCGCTCTGCATCGTCGTCGGGCTCGAC 4 102 0 TGCATCGCGT 0.996541 -199 AGTGCTATTTCTCATCGCGCTGCGCGCTCTG 4 121 0 CTCATCGGCT 0.98388 -180 AGGCCGCCCATGTATCGGCCTTGGTGAACCG 5 20 1 TGTATCGCCT 0.944562 -137 TCCCGCACTCCTCATCGTGGACCAAAATGCC 5 115 0 CTCATCGGGA 0.926939 -42 CGCTACGCTCTGCATCGTCGTCGGCGCAGG 7 10 0 TGCATCGCGT 0.996541 -218 CGCTACGCTCTGCATCGTCGTCGGCGCAGGT 7 87 0 TGCATCGCGT 0.996541 -141 CGCTACGCTCTGCATCGTCGTCGGCGCAGGT 7 164 0 TGCATCGCGT 0.996541 -64 ******* *** Masking position 5 Map Score: 26.8381 Number of sites scoring better than the average of aligned sites = 207 Number in coding regions = 202 Number in noncoding regions = 5 Number of orfs with sites within 600 bp upstream = 6 Fraction of orfs with sites within 600 bp upstream = 0.000963701 Motif number 6 AACGGTTCCCTGGCGAAAAAGCATGGG 1 8 1 CCCTGGCGAA 0.974094 -182 TTATTGATTTCCGTGGCGCAGAAAAAAGCA 1 67 0 CCGTGGCGCA 0.990345 -123 TCTGTCATAAATCTGACGCATAATGACGTC 1 129 1 ATCTGACGCA 0.963446 -61 CGCCTTGCTCATCGGACGCAGAGCAGGGCT 2 11 1 ATCGGACGCA 0.875006 -47 GTTTTACACCCCCTGACGCATGTTTGCAGC 3 64 0 CCCTGACGCA 0.994559 -83 ACCGGCAAGTCTCTCACGCACTCCCGCACT 5 137 0 CTCTCACGCA 0.956806 -20 AACCGAACAGCTGTGGCGTAGTGTGTGACT 6 94 1 CTGTGGCGTA 0.893478 -80 GTGAACGTCGCCCTAGCGCGGCAAGGCCAA 6 133 0 CCCTAGCGCG 0.908986 -41 ********** Masking position 7 Map Score: 7.64928 Number of sites scoring better than the average of aligned sites = 1173 Number in coding regions = 1116 Number in noncoding regions = 57 Number of orfs with sites within 600 bp upstream = 66 Fraction of orfs with sites within 600 bp upstream = 0.0106007 Motif number 7 GCAAATGGCACATCTGTTTGGGTATAATCG 1 40 0 CATCTGTTTG 0.796956 -150 CACATATCTTCAGGTTATTGATTTCCGTGG 1 81 0 CAGGTTATTG 0.932649 -109 AGATTTATGACAGATTTATGAAAAGCTCGT 1 113 0 CAGATTTATG 0.760668 -77 CATTATGCGTCAGATTTATGACAGATTTAT 1 124 0 CAGATTTATG 0.760668 -66 AAGACGCCCGCCGGTGATGGGCTGGTGGCG 4 162 1 CCGGTGATGG 0.958572 -139 CATTGGCATGCATGTGATGGTTTAGCGTTC 4 244 1 CATGTGATGG 0.901488 -57 TGTGCCTCTTCAGGTGTTTGTCGGCTTCGT 4 277 1 CAGGTGTTTG 0.97816 -24 TGCCAAACAGCATGTGAACGGTAACCGAAC 6 72 1 CATGTGAACG 0.843641 -102 CACTACGCCACAGCTGTTCGGTTACCGTTC 6 87 0 CAGCTGTTCG 0.939511 -87 TGTGACTTGTCCGATTTTGGCCTTGCCGCG 6 117 1 CCGATTTTGG 0.768023 -57 TCCTACAAATCCGGTGAACGTCGCCCTAGC 6 146 0 CCGGTGAACG 0.931706 -28 ********** Masking position 5 Map Score: 7.76733 Number of sites scoring better than the average of aligned sites = 2562 Number in coding regions = 2445 Number in noncoding regions = 117 Number of orfs with sites within 600 bp upstream = 133 Fraction of orfs with sites within 600 bp upstream = 0.021362 Motif number 8 AGAAATCATAAGCCCTGCTCTGCGTCCGATG 2 20 0 AGCCCTGCCT 0.662461 -38 TCGTCGGGCTCGACCTAACCGCCCAACTCCT 4 27 0 CGACCTAACG 0.945851 -274 TCGTCGGGCTCGACCTAACCGCCCAACTCCT 4 85 0 CGACCTAACG 0.945851 -216 GCGGGCGTCTTGACCTCCACGAGTGCTATTT 4 142 0 TGACCTCCCG 0.986766 -159 TGCATGCCAATGACTTGAACGCGCAAATTGT 4 225 0 TGACTTGACG 0.944778 -76 GTTACGGTGCCGACCACCTCGGCGGTATGAA 5 54 1 CGACCACCCG 0.921216 -103 AGTGCGTGAGAGACTTGCCGGT 5 145 1 AGACTTGCGG 0.862754 -12 GTTTGAGATCCCACCTGCCGGCGGTTTCGGC 6 13 1 CCACCTGCGG 0.897641 -161 GCGTAGTGTGTGACTTGTCCGATTTTGGCCT 6 109 1 TGACTTGTCG 0.871321 -65 GTGGCGCTGATGACCTGCGCCGACGACGATG 7 75 1 TGACCTGCCC 0.98495 -153 GTGGCGCTGATGACCTGCGCCGACGACGATG 7 152 1 TGACCTGCCC 0.98495 -76 ******** ** Masking position 4 Map Score: 8.45751 Number of sites scoring better than the average of aligned sites = 1630 Number in coding regions = 1566 Number in noncoding regions = 64 Number of orfs with sites within 600 bp upstream = 63 Fraction of orfs with sites within 600 bp upstream = 0.0101189 Motif number 9 TGTTTGGGTATAATCGCGCCCATGCTTTTT 1 26 0 TAATCGCGCC 0.968885 -164 GTCGCATTAATGATCGCAACCTATTTATTA 1 156 1 TGATCGCAAC 0.916549 -34 CTCTATCGTTGAATCGCGACAGAAAGATTT 3 20 0 GAATCGCGAC 0.881494 -127 CAACTCCTTCTCATCGCGCTGCGC 4 5 0 TCATCGCGCT 0.980402 -296 CAACTCCTTCTCATCGCGCTGCGCGCTCTG 4 63 0 TCATCGCGCT 0.980402 -238 GTGCTATTTCTCATCGCGCTGCGCGCTCTG 4 121 0 TCATCGCGCT 0.980402 -180 CGGAACGGGGTGAGCGCCACCAGCCCATCA 4 176 0 TGAGCGCCAC 0.753703 -125 GCGCAAATTGTGATCGCGAATTTCTGAGTC 4 206 0 TGATCGCGAA 0.969317 -95 GCCAATGACTTGAACGCGCAAATTGTGATC 4 221 0 TGAACGCGCA 0.924383 -80 GAGGCACAGCGGAACGCTAAACCATCACAT 4 255 0 GGAACGCTAA 0.485593 -46 CTCGGCGGTATGAACGCGCTGCGCAGCGGA 5 71 1 TGAACGCGCT 0.941372 -86 TGCCCCCACCTCATCGCTACGCTCTGCATC 7 25 0 TCATCGCTAC 0.973065 -203 TGCCCCCACCTCATCGCTACGCTCTGCATC 7 102 0 TCATCGCTAC 0.973065 -126 TGCCCCCACCTCATCGCTACGCTCTGCATC 7 179 0 TCATCGCTAC 0.973065 -49 ********** Masking position 3 Map Score: 25.933 Number of sites scoring better than the average of aligned sites = 1162 Number in coding regions = 1117 Number in noncoding regions = 45 Number of orfs with sites within 600 bp upstream = 50 Fraction of orfs with sites within 600 bp upstream = 0.00803084 Motif number 10 GATTTGCCCTGTTGTAATAAATAG 1 176 0 TGCCCTGTTG 0.757937 -14 ACGTAATTTCTGCCTCGGAGGTATTTAAAC 3 126 1 TGCCTCGGAG 0.956573 -21 CTGCGCGCTCTGCATCGTCGTCGGGCTCGA 4 45 0 TGCATCGTCG 0.990621 -256 CTGCGCGCTCTGCATCGTCGTCGGGCTCGA 4 103 0 TGCATCGTCG 0.990621 -198 GGTGTTTGTCGGCTTCGTTGCC 4 289 1 GGCTTCGTTG 0.969784 -12 CCCATGTATCGGCCTTGGTGAACCGGCCGT 5 26 1 GGCCTTGGTG 0.943316 -131 ACCTGCCGGCGGTTTCGGCGGCTGATGGTG 6 25 1 GGTTTCGGCG 0.837568 -149 GCTGATGGTGTGCTTTGGTGCGCTGTTTGC 6 45 1 TGCTTTGGTG 0.911476 -129 GTCCGATTTTGGCCTTGCCGCGCTAGGGCG 6 125 1 GGCCTTGCCG 0.927873 -49 GACGTTCACCGGATTTGTAGGATTTTCCTT 6 154 1 GGATTTGTAG 0.329067 -20 CGCTACGCTCTGCATCGTCGTCGGCGCAGG 7 11 0 TGCATCGTCG 0.990621 -217 CGCTACGCTCTGCATCGTCGTCGGCGCAGG 7 88 0 TGCATCGTCG 0.990621 -140 CGCTACGCTCTGCATCGTCGTCGGCGCAGG 7 165 0 TGCATCGTCG 0.990621 -63 ********** Masking position 7 Map Score: 23.221 Number of sites scoring better than the average of aligned sites = 1199 Number in coding regions = 1136 Number in noncoding regions = 63 Number of orfs with sites within 600 bp upstream = 64 Fraction of orfs with sites within 600 bp upstream = 0.0102795 Motif number 11 AATCGCGCCCATGCTTTTTCGCCAGGGAAC 1 15 0 ATGCTTTTTC 0.923165 -175 CCAAACAGATGTGCCATTTGCTTTTTTCTG 1 49 1 GTGCCATTTG 0.96719 -141 ACCTCCACGAGTGCTATTTCTCATCGCGCT 4 131 0 GTGCTATTTC 0.972646 -170 GCGTTCCGCTGTGCCTCTTCAGGTGTTTGT 4 268 1 GTGCCTCTTC 0.915101 -33 GTGCTTTGGTGCGCTGTTTGCCAAACAGCA 6 54 1 GCGCTGTTTG 0.952631 -120 TACCGTTCACATGCTGTTTGGCAAACAGCG 6 65 0 ATGCTGTTTG 0.94894 -109 ********** Masking position 8 Map Score: 0.574787 Number of sites scoring better than the average of aligned sites = 323 Number in coding regions = 301 Number in noncoding regions = 22 Number of orfs with sites within 600 bp upstream = 28 Fraction of orfs with sites within 600 bp upstream = 0.00449727 Motif number 12 ********** No masking Map Score: -1.3476e-12 Number of sites scoring better than the average of aligned sites = 0 Number in coding regions = 0 Number in noncoding regions = 0 Number of orfs with sites within 600 bp upstream = 0 Fraction of orfs with sites within 600 bp upstream = 0 Motif number 13 ********** No masking Map Score: -1.3476e-12 Number of sites scoring better than the average of aligned sites = 0 Number in coding regions = 0 Number in noncoding regions = 0 Number of orfs with sites within 600 bp upstream = 0 Fraction of orfs with sites within 600 bp upstream = 0 Motif number 14 ********** No masking Map Score: -1.3476e-12 Number of sites scoring better than the average of aligned sites = 0 Number in coding regions = 0 Number in noncoding regions = 0 Number of orfs with sites within 600 bp upstream = 0 Fraction of orfs with sites within 600 bp upstream = 0