AlignACE 3.0 10/20/99
AlignACE2 -i AA/AA_operons006_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944234996
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	rodA	168	rod shape determining protein RodA
#1	aq_027	72	hypothetical protein
#2	aq_028	46	putative protein
#3	aq_509	300	hypothetical protein
#4	murB2	38	UDP-N-acetoenolpyruvoylglucosamine reductase
#5	mtfB	300	mannosyltransferase B
#6	spsK	63	spore coat polysaccharide biosynthesis protein SpsK
#7	mrcA	34	penicillin binding protein 1A
#8	murF	300	UDP-MURNAC-pentapeptide sythetase
#9	aq_1137	29	putative protein
#10	carB1	300	carbamoyl-phosphate synthase large subunit
#11	aq_1173	115	hypothetical protein
#12	murG	24	phospho-N-acetylmuramoyl-pentapeptide-transferase -
#13	aq_1188	48	putative protein
#14	efp	187	elongation factor P
#15	murE	300	UDP-MurNac-tripeptide synthetase
#16	asd	300	aspartate-semialdehyde dehydrogenase
#17	secA	56	preprotein translocase SecA subunit
#18	aq_1873	300	putative protein
#19	aq_2066	39	hypothetical protein
#20	argB	73	acetylglutamate kinase
#21	aq_2071	25	hypothetical protein

Motif 1
GTCGCCCATCCTTCCACCTCCTGTTAGGATT	11	16	0
CCTCACGGGGCTTCCACCTGCGGCCTATCAA	8	53	0
ACTTCACAGCCTTCTTCCTTCACAACATCGT	10	62	0
ATTCTCAAAGCTTCTTCCCGCTTAAGCC   	11	97	1
TACCAGGCTGCTCCACCCCGCGTTGCCAAAT	14	95	1
GTCAAGTCCCCTTTCCCCTCCACTTGAGTTA	14	154	1
GATTTCAAATCCCCCGCCTTCGTCCGCTCGG	15	255	0
GCGGGTTCAAATCCCGCCCCCGCAACCATAT	14	37	0
CCTGTACCTCCTCCCACCGGCGTGCAAGTCG	8	114	0
TACCGCTCGGCTTCACCCCTCACGGGGCTTC	8	70	0
CCATACACCACTTTCTCCTTCCAC       	5	3	0
GACCGGGTGTTTCCCCCCCGCTATGGCCACC	8	171	0
GAAATTCGTACTCTTTCCCCCGGTAAAGCAC	0	12	0
TTTCTGATTACTTTAACCTCCCTCAGTTCGT	18	111	0
TTAGTAAGTAATCCTACCTTCGGCGGACTTT	18	32	1
CCGCTCGGCCACCCCTCCTTCTAATATATTA	15	232	0
GAGAGCTTCTTTTCAACCTTCGAGCGATGGT	5	50	1
CTTACCTCGTCTCCTTCTTCCACGTATTCGT	0	139	0
      GATTTTTTTACCTCCTGAAAAAATC	2	4	1
AGGTTTTAGGTTTTTCCCTTCTTTTTTAAGT	16	215	0
          ***** *****
MAP Score: 22.4445

Motif 2
CGACTAAAGAGGAAATAGGGGAAAGACCGAGCTTCTTTAAG	0	71	0
CGAATACGTGGAAGAAGGAGACGAGGTAAGGGTAATTA   	0	140	1
AAGAATGGTTGGAGAAGCTGTAAGTAAAGCTCTTGAAAATA	3	50	1
AGATTTATAAGGCAATAAAGAAAGTGCGGGTAGCTTTTAGA	3	244	1
          GTGGAAGGAGAAAGTGGTGTATGGCAACAGA	5	0	1
TGTTTAAAGTTGGGATAATGATCATGATGATGAGGTCAGGT	5	132	1
TCAGGTGGTATGAGAGATGGCTGTGGTGGAGTTGATGTGGA	5	167	1
CCCCAGCGCCGATGATACTGTGCCGGCAGCGGCACGGGAAA	8	227	1
ACCGGTCGGTGTAGATATTGACTTGGAAGTTTGTTTTGACG	10	24	1
AGTTTGTTTTGACGATGTTGTGAAGGAAGAAGGCTGTGAAG	10	51	1
TTACAAAACTGGAGACGGAGACCTTTTTGAGAAGAAGATAG	10	141	1
ACAATTTATGGAAGAAATAGACAGCGTGGAGTACGGAGGAG	10	249	1
AAGAAGCTTTGAGAATACGGGTATTAACGCGAGTAAAACTA	11	72	0
ATTAGATACTGGTGATATGGTTGCGGGGGCGGGATTTGAAC	14	23	1
CTCAAGTGGAGGGGAAAGGGGACTTGACGAGATAAGATTTT	14	141	0
AAAGGATATCGATGAGATTGTAAGGGAAGTGGAGTTCTTTA	15	144	1
GGATAATATATTAGAAGGAGGGGTGGCCGAGCGGACGAAGG	15	229	1
GGTGCCATATGAAGAAATAGAAGTGATCGTTAAAGTGGGTA	16	248	1
AATACTCAAAGAGGAAAGTGTGGAGAAAGCTAAATCCATCC	18	223	1
          ** ** *  *    **  * *
MAP Score: 20.6634

Motif 3
AATTCGTACTCTTTCCCCCGGTAAAGCACT	0	11	0
GCCTTTAACTTCTTTTCGGGAAATTCGTAC	0	32	0
AGAAGCTCGGTCTTTCCCCTATTTCCTCTT	0	76	1
CTCGTCTCCTTCTTCCACGTATTCGTCCTC	0	135	0
CTTTCAGAGCTTTTTCCCTGTCCTTGGGGT	1	23	0
TTCCTTGAGCTCTTCTACGGCTTTCAGAGC	1	43	0
     GAAGTTCTTTTCCTTGAGCTCTTCT	1	57	0
       GATTTTTTTACCTCCTGAAAAAA	2	3	1
    AATCACTTTTTCCCTTTATCTCTTTT	3	284	0
TTCATTAATTTCTTTTACTTTAATACTCT 	4	9	0
CCATACACCACTTTCTCCTTCCAC      	5	4	0
CAGCGACCTACTTTCCCGTGCCGCTGCCGG	8	249	0
GACCGGTAAGTCTTCCAGTTC         	10	1	0
CGTCGCCCATCCTTCCACCTCCTGTTAGGA	11	18	0
TCTCAAAGCTTCTTCCCGCTTAAGCC    	11	99	1
CGTCAAGTCCCCTTTCCCCTCCACTTGAGT	14	153	1
AGCATGGTCATCTTCTACGTAGTACCTCAC	15	76	0
GAGTTTAACATTTTTTCCGG          	16	0	0
CCTGCTCAATTCTTCCACTGAATTAAAAGA	16	39	0
CAATAATTTCTTTTCTCCTGGGGCTTAAAA	16	70	0
AGGTTTTAGGTTTTTCCCTTCTTTTTTAAG	16	216	0
   GCCCTTTTCTTTTAGTTTTCTCTTTAT	17	7	1
TATATATCCTTCTTCTACTTTACGGTGAAC	18	83	1
CTTTGAGTATTTTTTCAGTGTGCAATAGAA	18	204	0
     GAAAACCTTTCCGTGAAATTCCCGT	20	58	0
          **********
MAP Score: 20.6046

Motif 4
AAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGAAATC	15	243	1
GAGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTGAGG	8	41	1
TTATATCCGAGGACGAATACGTGGAAGAAGGAGACGAGGTAAG	0	127	1
CCCCCAGCGCCGATGATACTGTGCCGGCAGCGGCACGGGAAAG	8	226	1
TAGCTCGCCGGGCTCATAACCCGGAGGTCGCGGGTTCAAATCC	14	54	0
     GAACTGGAAGACTTACCGGTCGGTGTAGATATTGACTT	10	5	1
TGAGTACGGTGGTGGATAATATATTAGAAGGAGGGGTGGCCGA	15	216	1
AAAAGGATATCGATGAGATTGTAAGGGAAGTGGAGTTCTTTAT	15	143	1
GATGAGGTCAGGTGGTATGAGAGATGGCTGTGGTGGAGTTGAT	5	160	1
AAGTTTGTTTTGACGATGTTGTGAAGGAAGAAGGCTGTGAAGT	10	50	1
CCAAGGACAGGGAAAAAGCTCTGAAAGCCGTAGAAGAGCTCAA	1	26	1
ACACACTGCAGGATTATATAAGAATGGTTGGAGAAGCTGTAAG	3	31	1
ATCGGCGCTGGGGGGCTTAACTGCCGGGTTCGGAATGGGACCG	8	197	0
TCCCTCAGTTCGTTCACCGTAAAGTAGAAGAAGGATATATAAA	18	81	0
AAATAGACAGCGTGGAGTACGGAGGAGAATAAGTATAATCTTT	10	263	1
GTGGAAGGATGGGCGACGTAATGATAGCTGTTATAACTATCGT	11	30	1
TATTAGATACTGGTGATATGGTTGCGGGGGCGGGATTTGAACC	14	22	1
          **  **      *  **  * **
MAP Score: 20.4783

Motif 5
TAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGA	15	240	1
AGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTGAGG	8	42	1
    GAACTGGAAGACTTACCGGTCGGTGTAGATATTGACTT	10	6	1
GCTTTATTCTGTTGACGGATTGCCCCTGGTGGCCATAGCGGG	8	144	1
AGTTTGTTTTGACGATGTTGTGAAGGAAGAAGGCTGTGAAGT	10	51	1
AATCCTAACAGGAGGTGGAAGGATGGGCGACGTAATGATAGC	11	16	1
GCGGGGTGGAGCAGCCTGGTAGCTCGCCGGGCTCATAACCCG	14	74	0
GTCTGAGATTGACGCTTCTGAGTACGGTGGTGGATAATATAT	15	198	1
CAAGATAAGGGCTCCCTGAAGGGCCCCGGGAGACTACCGGGT	8	12	1
CGTTCGACTTGCACGCCGGTGGGAGGAGGTACAGGCTTTATT	8	110	1
GGAAACACCCGGTCCCATTCCGAACCCGGCAGTTAAGCCCCC	8	188	1
CCCCAGCGCCGATGATACTGTGCCGGCAGCGGCACGGGAAAG	8	227	1
GGAAGAAATAGACAGCGTGGAGTACGGAGGAGAATAAGTATA	10	258	1
ATGAGGTCAGGTGGTATGAGAGATGGCTGTGGTGGAGTTGAT	5	161	1
TATTTCCTCTTTAGTCGTTAAGAACGGTGAGGTTATATCCGA	0	95	1
AAAGGCTAAAGAGCTCTTAAAGAAGCTCGGTCTTTCCCCTAT	0	56	1
AGCGGCACGGGAAAGTAGGTCGCTGCCAGGGGCTTTACCTGT	8	254	1
       GATGTAGACGTTGTGACTCCCGAAGATCCCGATTT	15	3	1
          *  * * *   * ***  *  *
MAP Score: 19.1851

Motif 6
AATTTCCCGAAAAGAAGTTAAAGGCTAAAGAGC	0	37	1
AACGACTAAAGAGGAAATAGGGGAAAGACCGAG	0	81	0
CGAATACGTGGAAGAAGGAGACGAGGTAAGGGT	0	140	1
ATTCTTCGGTAAGGAAATCTGAGGAGGACTTCC	3	107	1
GAAGATACTGGAAGAGATTGAAGCTCTGCTGAT	3	192	1
ATAAGGCAATAAAGAAAGTGCGGGTAGCTTTTA	3	250	1
AGCTTTTAGAAAAGAGATAAAGGGAAAAAGTGA	3	275	1
TATTAAAGTAAAAGAAATTAATGAAAAATTTTT	4	14	1
    GTGGAAGGAGAAAGTGGTGTATGGCAACA	5	6	1
CACGCCGGTGGGAGGAGGTACAGGCTTTATTCT	8	121	1
TGTTGTGAAGGAAGAAGGCTGTGAAGTTGACTT	10	66	1
AAAAGACATTAAAGAAATAAAGGAATTTGTAAC	10	204	1
ACAATTTATGGAAGAAATAGACAGCGTGGAGTA	10	249	1
ATGAGATTGTAAGGGAAGTGGAGTTCTTTATTC	15	155	1
TAATATATTAGAAGGAGGGGTGGCCGAGCGGAC	15	232	1
TGGCCGAGCGGACGAAGGCGGGGGATTTGAAAT	15	252	1
CCCCAGGAGAAAAGAAATTATTGATGTGGTTAA	16	77	1
TAATTTTACTGAAGAAAGCAGGATTTCTTGAAC	16	184	1
TGAACTTAAAAAAGAAGGGAAAAACCTAAAACC	16	212	1
GGTGCCATATGAAGAAATAGAAGTGATCGTTAA	16	248	1
CCGTAAAGTAGAAGAAGGATATATAAAGAATAA	18	75	0
CTTTTGACGCAAAGGAAGTAATAAACTCTCTCA	18	159	1
AATACTCAAAGAGGAAAGTGTGGAGAAAGCTAA	18	223	1
          ******** *  *
MAP Score: 18.8919

Motif 7
TCGTACTCTTTCCCCCGGTAAAGCACTT    	0	6	0
TATGAGAGATGGCTGTGGTGGAGTTGATGTGG	5	175	1
CTCCCTGAAGGGCCCCGGGAGACTACCGGGTT	8	23	1
GGGTTGATAGGCCGCAGGTGGAAGCCCCGTGA	8	50	1
GCAGGTGGAAGCCCCGTGAGGGGTGAAGCCGA	8	63	1
CGACTTGCACGCCGGTGGGAGGAGGTACAGGC	8	114	1
TTGACGGATTGCCCCTGGTGGCCATAGCGGGG	8	155	1
CAGTATCATCGGCGCTGGGGGGCTTAACTGCC	8	215	0
ACTTTCCCGTGCCGCTGCCGGCACAGTATCAT	8	238	0
AACAGGTAAAGCCCCTGGCAGCGACCTACTTT	8	265	0
CAGCGTGGAGTACGGAGGAGAATAAGTATAAT	10	270	1
GTGATATGGTTGCGGGGGCGGGATTTGAACCC	14	34	1
CGCTTCTGAGTACGGTGGTGGATAATATATTA	15	210	1
TGGCCGAGCGGACGAAGGCGGGGGATTTGAAA	15	252	1
GGATTTGAAATCCCTTGGCGGGTTACAGGCCC	15	274	1
AGGATTTTAAGCCCCAGGAGAAAAGAAATTAT	16	66	1
CTAAAAGTCCGCCGAAGGTAGGATTACTTACT	18	34	0
          ***** ** ***
MAP Score: 18.3327

Motif 8
GTGGCCGAGCGGACGAAGGCGGGGGATTTGAAAT	15	251	1
CGGGAAAGTAGGTCGCTGCCAGGGGCTTTACCTG	8	261	1
CCTAACAGGAGGTGGAAGGATGGGCGACGTAATG	11	19	1
ATACTGTGCCGGCAGCGGCACGGGAAAGTAGGTC	8	241	1
ACAGTATCATCGGCGCTGGGGGGCTTAACTGCCG	8	214	0
GCTAAAAGTCCGCCGAAGGTAGGATTACTTACTA	18	33	0
CGTTCGACTTGCACGCCGGTGGGAGGAGGTACAG	8	110	1
ATGTTGTGAAGGAAGAAGGCTGTGAAGTTGACTT	10	65	1
AATAATTTGGCAACGCGGGGTGGAGCAGCCTGGT	14	96	0
GGAGCAGCCTGGTAGCTCGCCGGGCTCATAACCC	14	75	0
CGGGTTGATAGGCCGCAGGTGGAAGCCCCGTGAG	8	49	1
TTCAACCTTCGAGCGATGGTTTGGAGAGTATGTA	5	61	1
CCCTGGTGGCCATAGCGGGGGGGAAACACCCGGT	8	167	1
TAATATATTAGAAGGAGGGGTGGCCGAGCGGACG	15	232	1
CAGGTGGTATGAGAGATGGCTGTGGTGGAGTTGA	5	168	1
ATATGGTTGCGGGGGCGGGATTTGAACCCGCGAC	14	37	1
GGCTTAAGCGGGAAGAAGCTTTGAGAATACGGGT	11	91	0
TTTTACTGAAGAAAGCAGGATTTCTTGAACTTAA	16	187	1
          ** *** **  ***
MAP Score: 18.2311

Motif 9
CGAATTTCCCGAAAAGAAGTTAAAGGCTAAAGAGCTCTTA	0	35	1
CGACTAAAGAGGAAATAGGGGAAAGACCGAGCTTCTTTAA	0	72	0
AAGGACAGGGAAAAAGCTCTGAAAGCCGTAGAAGAGCTCA	1	28	1
TGATGCTGAGAAAAAAAAAGAAAAGATTTATAAGGCAATA	3	221	1
GGTAGCTTTTAGAAAAGAGATAAAGGGAAAAAGTGATT  	3	272	1
GTATTCAGTTAAAAATCACCCAGAGGGTTATAAATTCCAT	5	258	0
GAAATACTCAAAAAAGACATTAAAGAAATAAAGGAATTTG	10	193	1
       AAAAGAAAAGTTTAAAATATCAAG         	12	3	1
AGGGACTACAAAAACGTCTATAAAGACGTAATTTTACTGA	16	156	1
CTTGAACTTAAAAAAGAAGGGAAAAACCTAAAACCTGTGG	16	210	1
CTCCTAACTAAATAAATTTATAAAGAGAAAACTAAAAGAA	17	16	0
TTACTTACTAAAAACATAAAAAAATCGTCAAGG       	18	3	0
GGATATATAAAGAATAAATACAAAGGCTAAAAGTCCGCCG	18	52	0
TAAAGTAATCAGAAAAGCCGAAAAGGAACATTCTTTTGAC	18	127	1
AAGGAAGTAATAAACTCTCTCAAAGCCCTAAAGGTTCTAT	18	170	1
TTGCACACTGAAAAAATACTCAAAGAGGAAAGTGTGGAGA	18	209	1
CATCCTTGATGAAACCATTAAAAAGTTAGAAAATAAATAG	18	259	1
          *****      ****    *
MAP Score: 17.9892

Motif 10
AAGTCCTCCTCAGATTTCCTTACCGAAGAATATGATAA	3	100	0
GGGAGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCC	8	39	1
CCTCCTCCCACCGGCGTGCAAGTCGAACGGGCGATTAG	8	101	0
CGGATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACC	8	159	1
CATTCCGAACCCGGCAGTTAAGCCCCCCAGCGCCGATG	8	203	1
GGCAGCGGCACGGGAAAGTAGGTCGCTGCCAGGGGCTT	8	251	1
       GAACTGGAAGACTTACCGGTCGGTGTAGATA	10	3	1
GGTTGCGGGGGCGGGATTTGAACCCGCGACCTCCGGGT	14	41	1
CCCGCGACCTCCGGGTTATGAGCCCGGCGAGCTACCAG	14	63	1
GGCGAGCTACCAGGCTGCTCCACCCCGCGTTGCCAAAT	14	88	1
GTTCTTTATTCAGGAGTTTGAGTCTGAGATTGACGCTT	15	177	1
ATTAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGG	15	238	1
AAATCCCTTGGCGGGTTACAGGCCCGCCC         	15	281	1
AAGAATTGAGCAGGATTTTAAGCCCCAGGAGAAAAGAA	16	55	1
CCTACCTTCGGCGGACTTTTAGCCTTTGTATTTATTCT	18	44	1
CTAAGTTCTTCAGGAAGCCCTGCCTTACATACGGGAAT	20	28	1
          * **  * *  ****  *
MAP Score: 15.9997

Motif 11
GAAATTCGTACTCTTTCCCCCGGTAAAGCA	0	13	0
AAGAAGCTCGGTCTTTCCCCTATTTCCTCT	0	75	1
TCTTCCACGTATTCGTCCTCGGATATAACC	0	125	0
ACCTCGTCTCCTTCTTCCACGTATTCGTCC	0	137	0
GCTTTCAGAGCTTTTTCCCTGTCCTTGGGG	1	24	0
     AATCACTTTTTCCCTTTATCTCTTT	3	285	0
ACACCACTTTCTCCTTCCAC          	5	0	0
AAATTCCATGCTCTGTCCAATAAATCTGTT	5	237	0
AAGCCTGTACCTCCTCCCACCGGCGTGCAA	8	118	0
ACTTCACAGCCTTCTTCCTTCACAACATCG	10	63	0
TCAAAAAGGTCTCCGTCTCCAGTTTTGTAA	10	141	0
GTATTTCTATCTTCTTCTCAAAAAGGTCTC	10	158	0
TACGTCGCCCATCCTTCCACCTCCTGTTAG	11	20	0
ATTCTCAAAGCTTCTTCCCGCTTAAGCC  	11	97	1
TCGTCAAGTCCCCTTTCCCCTCCACTTGAG	14	152	1
TCGGCCACCCCTCCTTCTAATATATTATCC	15	229	0
AATCCCCCGCCTTCGTCCGCTCGGCCACCC	15	249	0
ATCCTGCTCAATTCTTCCACTGAATTAAAA	16	41	0
AAAAAGTACAATCCGTCCTCTATAAGAGAA	16	108	1
TTTATATATCCTTCTTCTACTTTACGGTGA	18	81	1
ATGGATTTAGCTTTCTCCACACTTTCCTCT	18	232	0
          **********
MAP Score: 15.3873

Motif 12
CCTGAAGGGCCCCGGGAGACTACCGGGTTGATAGGCCGCAG	8	26	1
TTGATAGGCCGCAGGTGGAAGCCCCGTGAGGGGTGAAGCCG	8	53	1
CCACCGGCGTGCAAGTCGAACGGGCGATTAGTACCGCTCGG	8	91	0
CGACTTGCACGCCGGTGGGAGGAGGTACAGGCTTTATTCTG	8	114	1
ACGGATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACCCG	8	158	1
CCATTCCGAACCCGGCAGTTAAGCCCCCCAGCGCCGATGAT	8	202	1
ATGATACTGTGCCGGCAGCGGCACGGGAAAGTAGGTCGCTG	8	238	1
        GAACTGGAAGACTTACCGGTCGGTGTAGATATT	10	2	1
CTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCGGGTTC	14	60	0
CGGCGAGCTACCAGGCTGCTCCACCCCGCGTTGCCAAATTA	14	87	1
TAATATATTAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGG	15	232	1
        GGGCGGGCCTGTAACCCGCCAAGGGATTTCAAA	15	277	0
GAAGAATTGAGCAGGATTTTAAGCCCCAGGAGAAAAGAAAT	16	54	1
          ** **  *     ***   **
MAP Score: 14.7397

Motif 13
GGTGAGGTTATATCCGAGGACGAATACGTGGAAGAAGGAGACGAG	0	120	1
TCATGATGATGAGGTCAGGTGGTATGAGAGATGGCTGTGGTGGAG	5	153	1
GCTCCCTGAAGGGCCCCGGGAGACTACCGGGTTGATAGGCCGCAG	8	22	1
CGGGTTGATAGGCCGCAGGTGGAAGCCCCGTGAGGGGTGAAGCCG	8	49	1
CGTTCGACTTGCACGCCGGTGGGAGGAGGTACAGGCTTTATTCTG	8	110	1
GTTGACGGATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACCCG	8	154	1
CAGTATCATCGGCGCTGGGGGGCTTAACTGCCGGGTTCGGAATGG	8	202	0
ACGATGTTGTGAAGGAAGAAGGCTGTGAAGTTGACTTAACACCCG	10	62	1
TAGACAGCGTGGAGTACGGAGGAGAATAAGTATAATCTTTCTTA 	10	266	1
ACAGGAGGTGGAAGGATGGGCGACGTAATGATAGCTGTTATAACT	11	23	1
GGTGATATGGTTGCGGGGGCGGGATTTGAACCCGCGACCTCCGGG	14	33	1
CTCCGGGTTATGAGCCCGGCGAGCTACCAGGCTGCTCCACCCCGC	14	71	1
TCGAAATCGGGATCTTCGGGAGTCACAACGTCTACATC       	15	3	0
ACGCTTCTGAGTACGGTGGTGGATAATATATTAGAAGGAGGGGTG	15	209	1
ATATTAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTG	15	236	1
GGGATTTGAAATCCCTTGGCGGGTTACAGGCCCGCCC        	15	273	1
AAGGCTAAAAGTCCGCCGAAGGTAGGATTACTTACTAAAAACATA	18	25	0
          *  **  ** **       *   **
MAP Score: 12.9324

Motif 14
TAAGAACGGTGAGGTTATATCCGAGGACGAATACGTGGA	0	113	1
CGAATACGTGGAAGAAGGAGACGAGGTAAGGGTAATTA 	0	140	1
ATGAGGTCAGGTGGTATGAGAGATGGCTGTGGTGGAGTT	5	161	1
AGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTG	8	42	1
CCACCGGCGTGCAAGTCGAACGGGCGATTAGTACCGCTC	8	93	0
TTATTCTGTTGACGGATTGCCCCTGGTGGCCATAGCGGG	8	147	1
ATCGGCGCTGGGGGGCTTAACTGCCGGGTTCGGAATGGG	8	201	0
CAGCGCCGATGATACTGTGCCGGCAGCGGCACGGGAAAG	8	230	1
    GAACTGGAAGACTTACCGGTCGGTGTAGATATTGA	10	6	1
TTGTTTTGACGATGTTGTGAAGGAAGAAGGCTGTGAAGT	10	54	1
ACAATTTATGGAAGAAATAGACAGCGTGGAGTACGGAGG	10	249	1
AATCCTAACAGGAGGTGGAAGGATGGGCGACGTAATGAT	11	16	1
CGTAATGATAGCTGTTATAACTATCGTAGTTTTACTCGC	11	46	1
AGATACTGGTGATATGGTTGCGGGGGCGGGATTTGAACC	14	26	1
GCGGGGTGGAGCAGCCTGGTAGCTCGCCGGGCTCATAAC	14	77	0
     GAGGAGATATTTTAACTCAAGTGGAGGGGAAAGG	14	163	0
    GATGTAGACGTTGTGACTCCCGAAGATCCCGATTT	15	6	1
GGATATCGATGAGATTGTAAGGGAAGTGGAGTTCTTTAT	15	147	1
TAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATT	15	240	1
TCTACTTTACGGTGAACGAACTGAGGGAGGTTAAAGTAA	18	96	1
          *  *   ** *** **  *
MAP Score: 8.20336

Motif 15
CCAAGATAAGGGCTCCCTGAAGGGCCCCGGGAGACTAC	8	11	1
CCGGGAGACTACCGGGTTGATAGGCCGCAGGTGGAAGC	8	37	1
GGTGAAGCCGAGCGGTACTAATCGCCCGTTCGACTTGC	8	84	1
TGGTGGCCATAGCGGGGGGGAAACACCCGGTCCCATTC	8	170	1
CCCATTCCGAACCCGGCAGTTAAGCCCCCCAGCGCCGA	8	201	1
TGGTTGCGGGGGCGGGATTTGAACCCGCGACCTCCGGG	14	40	1
CTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCGGG	14	63	0
CCGGCGAGCTACCAGGCTGCTCCACCCCGCGTTGCCAA	14	86	1
GAAATCCCTTGGCGGGTTACAGGCCCGCCC        	15	280	1
GGAAGAATTGAGCAGGATTTTAAGCCCCAGGAGAAAAG	16	53	1
          *** **       *****
MAP Score: 7.43965

Motif 16
TATATCCGAGGACGAATACGTGGAAGAAGGAGACGAGGTA	0	128	1
CATATTCTTCGGTAAGGAAATCTGAGGAGGACTTCCGACA	3	104	1
TTCCGACATAGATGTGGGAATTTACTGCGGAAAGAAACTT	3	136	1
AAGTTGGGATAATGATCATGATGATGAGGTCAGGTGGTAT	5	138	1
GATGAGGTCAGGTGGTATGAGAGATGGCTGTGGTGGAGTT	5	160	1
AGATGGCTGTGGTGGAGTTGATGTGGACGAGAAAATAATC	5	181	1
GAGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTG	8	41	1
TCCTCCCACCGGCGTGCAAGTCGAACGGGCGATTAGTACC	8	97	0
GATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACCCGGT	8	161	1
CTGCCGGCACAGTATCATCGGCGCTGGGGGGCTTAACTGC	8	216	0
TTGTTTTGACGATGTTGTGAAGGAAGAAGGCTGTGAAGTT	10	54	1
GGAAGAAATAGACAGCGTGGAGTACGGAGGAGAATAAGTA	10	258	1
ATTAGATACTGGTGATATGGTTGCGGGGGCGGGATTTGAA	14	23	1
GTCTGAGATTGACGCTTCTGAGTACGGTGGTGGATAATAT	15	198	1
TACGGTGGTGGATAATATATTAGAAGGAGGGGTGGCCGAG	15	220	1
TAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTT	15	240	1
GTTTTTAGTAAGTAATCCTACCTTCGGCGGACTTTTAGCC	18	28	1
TCTACTTTACGGTGAACGAACTGAGGGAGGTTAAAGTAAT	18	96	1
ACTTTTTAATGGTTTCATCAAGGATGGATTTAGCTTTCTC	18	245	0
          ****     *  *  ** **
MAP Score: 6.86685

Motif 17
CCGGGGGAAAGAGTACGAATTTCCCGAAAAGAAGTTAAA	0	20	1
CTGAAGGGCCCCGGGAGACTACCGGGTTGATAGGCCGCA	8	27	1
TTGATAGGCCGCAGGTGGAAGCCCCGTGAGGGGTGAAGC	8	53	1
TACTAATCGCCCGTTCGACTTGCACGCCGGTGGGAGGAG	8	99	1
CGGAATGGGACCGGGTGTTTCCCCCCCGCTATGGCCACC	8	171	0
CATTCCGAACCCGGCAGTTAAGCCCCCCAGCGCCGATGA	8	203	1
       GAACTGGAAGACTTACCGGTCGGTGTAGATAT	10	3	1
GGTTGCGGGGGCGGGATTTGAACCCGCGACCTCCGGGTT	14	41	1
CCCGCGACCTCCGGGTTATGAGCCCGGCGAGCTACCAGG	14	63	1
GGCGAGCTACCAGGCTGCTCCACCCCGCGTTGCCAAATT	14	88	1
    GATGTAGACGTTGTGACTCCCGAAGATCCCGATTT	15	6	1
AAATCCCTTGGCGGGTTACAGGCCCGCCC          	15	281	1
AAGAATTGAGCAGGATTTTAAGCCCCAGGAGAAAAGAAA	16	55	1
          ****  *     ****  *
MAP Score: 6.70941

Motif 18
TCCCTGAAGGGCCCCGGGAGACTACCGGGT	8	24	1
GCAGGTGGAAGCCCCGTGAGGGGTGAAGCC	8	63	1
TTGACGGATTGCCCCTGGTGGCCATAGCGG	8	155	1
GTTCGGAATGGGACCGGGTGTTTCCCCCCC	8	183	0
AGGATTTTAAGCCCCAGGAGAAAAGAAATT	16	66	1
          **********
MAP Score: 4.32106

Motif 19
TGAGAGATGGCTGTGGTGGAGTTGATGTGG	5	177	1
GTTGATAGGCCGCAGGTGGAAGCCCCGTGA	8	52	1
GAAGCCCCGTGAGGGGTGAAGCCGAGCGGT	8	70	1
CTTGCACGCCGGTGGGAGGAGGTACAGGCT	8	117	1
GGTGGCCATAGCGGGGGGGAAACACCCGGT	8	171	1
GCGTGGAGTACGGAGGAGAATAAGTATAAT	10	272	1
AAATCCTAACAGGAGGTGGAAGGATGGGCG	11	15	1
ATATGGTTGCGGGGGCGGGATTTGAACCCG	14	37	1
ATTTGGCAACGCGGGGTGGAGCAGCCTGGT	14	96	0
TTTAACTCAAGTGGAGGGGAAAGGGGACTT	14	157	0
GAGATTGTAAGGGAAGTGGAGTTCTTTATT	15	157	1
CTTCTGAGTACGGTGGTGGATAATATATTA	15	212	1
ATATTAGAAGGAGGGGTGGCCGAGCGGACG	15	236	1
GAGCGGACGAAGGCGGGGGATTTGAAATCC	15	257	1
AACGAACTGAGGGAGGTTAAAGTAATCAGA	18	110	1
          **********
MAP Score: 3.41698

Motif 20
 AAGTGCTTTACCGGGGGAAAGAGTACGAATTTCCCG	0	9	1
AGGACGAATACGTGGAAGAAGGAGACGAGGTAAGGGT	0	136	1
CACCCCAAGGACAGGGAAAAAGCTCTGAAAGCCGTAG	1	22	1
ATTATATAAGAATGGTTGGAGAAGCTGTAAGTAAAGC	3	43	1
        GTGGAAGGAGAAAGTGGTGTATGGCAACA	5	2	1
TACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTGAG	8	46	1
GAAGCCCCGTGAGGGGTGAAGCCGAGCGGTACTAATC	8	70	1
CGACTTGCACGCCGGTGGGAGGAGGTACAGGCTTTAT	8	114	1
ACGATGTTGTGAAGGAAGAAGGCTGTGAAGTTGACTT	10	62	1
AATCCTAACAGGAGGTGGAAGGATGGGCGACGTAATG	11	16	1
TGGATAATATATTAGAAGGAGGGGTGGCCGAGCGGAC	15	228	1
GGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGAAAT	15	248	1
          *  **  ***** *  *
MAP Score: 3.33025

Motif 21
GCTTTACCGGGGGAAAGAGTACGAATTTCCC	0	14	1
CGAATTTCCCGAAAAGAAGTTAAAGGCTAAA	0	35	1
GAGGAAATAGGGGAAAGACCGAGCTTCTTTA	0	73	0
CCCAAGGACAGGGAAAAAGCTCTGAAAGCCG	1	25	1
AAGAGCTCAAGGAAAAGAACTTC        	1	59	1
TTTTTCAGGAGGTAAAAAAATC         	2	1	0
CATATTCTTCGGTAAGGAAATCTGAGGAGGA	3	104	1
AATTTACTGCGGAAAGAAACTTGACCTTTGA	3	154	1
GCTGATGCTGAGAAAAAAAAAGAAAAGATTT	3	219	1
GGTAGCTTTTAGAAAAGAGATAAAGGGAAAA	3	272	1
AAGAGATAAAGGGAAAAAGTGATT       	3	286	1
CTCGAAGGTTGAAAAGAAGCTCTCAATAAGC	5	43	0
AGACCTTTTTGAGAAGAAGATAGAAATACCA	10	159	1
CGAAATACTCAAAAAAGACATTAAAGAAATA	10	192	1
 GGCTTAAGCGGGAAGAAGCTTTGAGAATAC	11	95	0
ATTAATATATAGAAAAAATCTTATCTCGTCA	14	127	1
        CCGGAAAAAATGTTAAACTCGAA	16	2	1
AGCCCCAGGAGAAAAGAAATTATTGATGTGG	16	75	1
TAAAAAAGAAGGGAAAAACCTAAAACCTGTG	16	218	1
CAGAAAAGCCGAAAAGGAACATTCTTTTGAC	18	136	1
          ******** **
MAP Score: 3.10776

Motif 22
GTACTCTTTCCCCCGGTAAAGCACTT    	0	6	0
GAGTACGAATTTCCCGAAAAGAAGTTAAAG	0	30	1
ATTTTTTTACCTCCTGAAAAAATCTAAAAT	2	11	1
TCAGATTTCCTTACCGAAGAATATGATAAA	3	99	0
TGGGAATTTACTGCGGAAAGAAACTTGACC	3	150	1
       CTTCTCCCGTAAAGTATTTAATA	7	21	0
AGATAAGGGCTCCCTGAAGGGCCCCGGGAG	8	14	1
CCCTGAAGGGCCCCGGGAGACTACCGGGTT	8	25	1
GACGTTGTGACTCCCGAAGATCCCGATTTC	15	16	1
CAGACTCAAACTCCTGAATAAAGAACTCCA	15	173	0
GGATTTTAAGCCCCAGGAGAAAAGAAATTA	16	67	1
AGACGTAATTTTACTGAAGAAAGCAGGATT	16	179	1
GGCTAAAAGTCCGCCGAAGGTAGGATTACT	18	38	0
AAGGCAGGGCTTCCTGAAGAACTTAGCCTT	20	24	0
TTCCGTGAAATTCCCGTATGTAAGGCAGGG	20	45	0
          **********
MAP Score: 1.99341

Motif 23
TTTCCTCTTTAGTCGTTAAGAACGGTGAGGTTATATCCG	0	97	1
ATCCGAGGACGAATACGTGGAAGAAGGAGACGAGGTAAG	0	131	1
ATGGCTGTGGTGGAGTTGATGTGGACGAGAAAATAATCA	5	183	1
GAGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGT	8	41	1
CCGTTCGACTTGCACGCCGGTGGGAGGAGGTACAGGCTT	8	109	1
GGATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACCCG	8	160	1
AGAAATAGACAGCGTGGAGTACGGAGGAGAATAAGTATA	10	261	1
      TTAGTAAATCCTAACAGGAGGTGGAAGGATGGG	11	4	1
ATTAGATACTGGTGATATGGTTGCGGGGGCGGGATTTGA	14	23	1
CGCGACCTCCGGGTTATGAGCCCGGCGAGCTACCAGGCT	14	65	1
GGTGGTGGATAATATATTAGAAGGAGGGGTGGCCGAGCG	15	223	1
AAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATTTGA	15	243	1
GAATTGAGCAGGATTTTAAGCCCCAGGAGAAAAGAAATT	16	57	1
TCTACTTTACGGTGAACGAACTGAGGGAGGTTAAAGTAA	18	96	1
TTAAAAAGTTAGAAAATAAATAGGAGGGGCTTGA     	18	276	1
          **      **  ***** *
MAP Score: 1.82223

Motif 24
TCGTTAAGAACGGTGAGGTTATATCCGAGGACGAATACGTGGA	0	109	1
AGGACGAATACGTGGAAGAAGGAGACGAGGTAAGGGTAATTA 	0	136	1
GATAAGGGCTCCCTGAAGGGCCCCGGGAGACTACCGGGTTGAT	8	15	1
CGGGAGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTG	8	38	1
GGTGGAAGCCCCGTGAGGGGTGAAGCCGAGCGGTACTAATCGC	8	66	1
GTACTAATCGCCCGTTCGACTTGCACGCCGGTGGGAGGAGGTA	8	98	1
GACGGATTGCCCCTGGTGGCCATAGCGGGGGGGAAACACCCGG	8	157	1
CCATTCCGAACCCGGCAGTTAAGCCCCCCAGCGCCGATGATAC	8	202	1
CCCCCAGCGCCGATGATACTGTGCCGGCAGCGGCACGGGAAAG	8	226	1
        GAACTGGAAGACTTACCGGTCGGTGTAGATATTGA	10	2	1
CGGCGAGCTACCAGGCTGCTCCACCCCGCGTTGCCAAATTATT	14	87	1
AAAAGGATATCGATGAGATTGTAAGGGAAGTGGAGTTCTTTAT	15	143	1
ATATTAGAAGGAGGGGTGGCCGAGCGGACGAAGGCGGGGGATT	15	236	1
          ** **  *      ***  *  *
MAP Score: 1.82095

Motif 25
TAAGAACGGTGAGGTTATATCCGAGGACGAATACGTGGA	0	113	1
TACTGGAAGAGATTGAAGCTCTGCTGATGCTGAGAAAAA	3	197	1
TCAGGTGGTATGAGAGATGGCTGTGGTGGAGTTGATGTG	5	167	1
GATAAGGGCTCCCTGAAGGGCCCCGGGAGACTACCGGGT	8	15	1
AGACTACCGGGTTGATAGGCCGCAGGTGGAAGCCCCGTG	8	42	1
GAAGCCCCGTGAGGGGTGAAGCCGAGCGGTACTAATCGC	8	70	1
CGTTCGACTTGCACGCCGGTGGGAGGAGGTACAGGCTTT	8	110	1
TTATTCTGTTGACGGATTGCCCCTGGTGGCCATAGCGGG	8	147	1
ATGATACTGTGCCGGCAGCGGCACGGGAAAGTAGGTCGC	8	238	1
GCACGGGAAAGTAGGTCGCTGCCAGGGGCTTTACCTGTT	8	258	1
TGTTGTGAAGGAAGAAGGCTGTGAAGTTGACTTAACACC	10	66	1
AATCCTAACAGGAGGTGGAAGGATGGGCGACGTAATGAT	11	16	1
TAGATACTGGTGATATGGTTGCGGGGGCGGGATTTGAAC	14	25	1
TGGCAACGCGGGGTGGAGCAGCCTGGTAGCTCGCCGGGC	14	84	0
GGATAATATATTAGAAGGAGGGGTGGCCGAGCGGACGAA	15	229	1
TCTACTTTACGGTGAACGAACTGAGGGAGGTTAAAGTAA	18	96	1
          *  **  *  *** **  *
MAP Score: 0.592866