AlignACE 3.0 10/20/99 AlignACE2 -i AA/AA_operons009_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944235146 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 aq_609 300 hypothetical protein #1 thdF 145 thiophene and furan oxidation protein #2 aq_1137 29 putative protein #3 aq_1256 293 putative protein #4 himA 31 DNA binding protein HU #5 rpsA 66 ribosomal protein S01 #6 rpoD 38 RNA polymerase sigma factor RpoD #7 dnaG 66 DNA primase #8 rpsH 40 ribosomal protein S08 #9 rpsN 33 ribosomal protein S14 #10 rplN 145 ribosomal protein L14 #11 rpmA 77 ribosomal protein L27 #12 thrA 168 homoserine dehydrogenase #13 hflX 300 GTP-binding protein HflX #14 trxA1 300 thioredoxin #15 era1 62 GTP-binding protein Era #16 aq_1996 38 hypothetical protein #17 aq_2066 39 hypothetical protein #18 argB 73 acetylglutamate kinase #19 pepA 26 leucine aminopeptidase #20 gatC 297 glutamyl-tRNA (Gln) amidotransferase subunit C #21 aq_2170 300 hypothetical protein Motif 1 GGGTTATGCCCTTACAATAAGGGATTGCGACATTTCTTT 0 21 1 ATGTTATGCCCTTACAATAAGGGATTGCGACATTTCTTT 0 88 1 ATGTTATGCCCTTACAATAAGGGATTGCGACTTTGCTTT 0 155 1 ACGTTACGCCCTAACAGTAAGGGATCGTGATAAAATTTC 0 220 1 TAATATATTTCTTTAGTTAGGGGGTGTGGCGGAATTGGC 1 85 0 TGGTAGAGGGCTTAAAAGAAGGAAAAGAATTTCTTATTC 3 85 1 GTCCATGGGACTGAAGGAGGGGAAAAGGGCAAAAATACT 3 167 1 GGAAGGTATTATAAGGGAAAGGGAAGGGGA 4 1 0 ATAACTTTTTCTTTTGCAAAGGAGGTGTGAAAG 11 54 1 AATCTTTAACCTGACGGGGTGGGAAAGTGCCTTAAAAAA 14 66 0 CCTCTCGATACTCAAGGCACGGGGCATAGTAGGTTGGAA 14 188 1 CCTTTTAAGCCGTGGGTCGCGGGTTCGAGTCCCGCCCGG 20 86 0 CTCTTAGCAGCTCAACTGGTGGAGCGGAGGGGACTCGAA 20 152 1 TATGGCATGTCGGAGGTCGGGGGTTCGAGTCCCCTCCGC 20 175 0 AATTTCTATTCTGTCAGTAGGGGCGGTAGCTCAGCTGGG 20 224 0 ** * * * *** * * MAP Score: 26.8088 Motif 2 GAAAGAAATGTCGCAATCCCTTATTGTAAGGG 0 29 0 GAAAGAAATGTCGCAATCCCTTATTGTAAGGG 0 96 0 TAAAGCAAAGTCGCAATCCCTTATTGTAAGGG 0 163 0 CCCGTGAGGGTTCGACTCCCTCCACCCCCACC 1 18 0 TCTACCATTTTCTACCTCCTTTCGTGAAATAA 3 60 0 TAAGAAATTCTTTTCCTTCTTTTAAGCCCTCT 3 89 0 TTTTGCCCTTTTCCCCTCCTTCAGTCCCATGG 3 169 0 TCAGTGAGCCTCCTTCTTAAGGAGAT 3 277 0 TCCCCTTCCCTTTCCCTTATAA 4 0 1 TGTAAAACATTCTCACTTCTTTTTCAAAGAGA 5 17 0 GGCTTTTCACCCCTTTAATTAGAGTA 10 129 0 CTTTCACACCTCCTTTGCAAAAGAA 11 62 0 TCTTAAGTCCTTGTCCCCCTTTTAAAAATAAA 12 133 1 GTCCTGTATGTTAACTTCCCTTTGTTCCATAG 13 62 0 CACTATCCTGTTTCCCCTCGTTAGAAATACTG 13 134 0 TTTATCAAGTTCATCCACCCTCTACTATGGTA 13 249 0 AGCTCTTCTCTTATCATCCTTC 14 0 0 TAAGGCACTTTCCCACCCCGTCAGGTTAAAGA 14 71 1 GTTCTTCCTCCTTTACAATTAATT 14 286 0 TTTCCACCTCCTTCTTTTTGTTTA 16 2 1 AGAATAGAAATTATAATCCTTTTAAATGAAGG 20 251 1 TACGGGAAAATTAACCCTCTTTGGAGATATTT 21 108 1 ** ******** MAP Score: 24.1912 Motif 3 GCAGGGTTATGCCCTTACAATAAGGGATTGCGACATTTCT 0 18 1 TCAATGTTATGCCCTTACAATAAGGGATTGCGACATTTCT 0 85 1 TCAATGTTATGCCCTTACAATAAGGGATTGCGACTTTGCT 0 152 1 CATACGTTACGCCCTAACAGTAAGGGATCGTGATAAAATT 0 217 1 GGACTTAAAATCCCCTGGGCGAAAAGCCCGTGAGGGTTCG 1 36 0 AAAGCTCAGGTCCATGGGACTGAAGGAGGGGAAAAGGGCA 3 158 1 TTATTTGATCTCCTTAAGAAGGAGGCTCACTGA 3 270 1 AGGAAGGTATTATAAGGGAAAGGGAAGGGGA 4 4 0 AAGCCCAACTGCCGGCTTGAAGGAGGTTTGTA 8 18 1 AATAACTTTTTCTTTTGCAAAGGAGGTGTGAAAG 11 53 1 GAGTTATGTATCCTATGGAACAAAGGGAAGTTAACATACA 13 50 1 TACACCATTCTCCTTGAAGTTGAAGGACAGCCTCACCTGA 13 190 1 GCACGCGGTTTCTACCATAGTAGAGGGTGGATGAACTTGA 13 237 1 GGCATAGTAGGTTGGAAGAGAGAAGGCTCGATTATATGCT 14 210 1 AGAGCCGGTAGCTCAGTTGGTAGAGCAACGGCCTTTTAAG 20 116 0 GCTCTTAGCAGCTCAACTGGTGGAGCGGAGGGGACTCGAA 20 151 1 AGAGCGCCGATATGGCATGTCGGAGGTCGGGGGTTCGAGT 20 184 0 AGGGGCGGTAGCTCAGCTGGGAGAGCGCCGATATGGCATG 20 205 0 GAAATTATAATCCTTTTAAATGAAGGTTTCAAGTATCTAT 20 257 1 CTTTTACTGCTCTTTGTAATTGAGGGACAGGTTTCTCTCA 21 224 0 *** * ***** * MAP Score: 20.0833 Motif 4 GGTTGGGTGGTGGGGGTGGAGGGAG 1 4 1 ATTTCACGAAAGGAGGTAGAAAATGGTAGAG 3 62 1 AGGGCTTAAAAGAAGGAAAAGAATTTCTTAT 3 91 1 ATGGGACTGAAGGAGGGGAAAAGGGCAAAAA 3 171 1 TTTTAGAGTTAGGAGGTAAGAGA 6 25 1 ACTTAGCTTCAGGAGGTAAAGTTAGGT 9 16 1 GGCTAAAGTGAGCTGTAAAAACCTTCGCGTT 10 64 1 TTTGCAAAGGAGGTGTGAAAG 11 66 1 AGTATTTCTAACGAGGGGAAACAGGATAGTG 13 135 1 CCATAGTAGAGGGTGGATGAACTTGATAAAA 13 251 1 GAGCTTTTGAGCGAGGAAAAGCTCGAAGAGC 14 27 1 AAGCTCGAAGAGCTGGCGGAATTTTTTAAGG 14 45 1 TAACCTGACGGGGTGGGAAAGTGCCTTAAAA 14 68 0 TGCGTTAAAAACCTGGGAGAACTATTAAACC 14 132 1 AGAAACGCTGGGCTGGGAAAGGTTTAATAGT 14 152 0 GGGCATAGTAGGTTGGAAGAGAGAAGGCTCG 14 209 1 TTAATTGTAAAGGAGGAAGAAC 14 288 1 AACAAAAAGAAGGAGGTGGAAA 16 1 0 CCGGTAGCTCAGTTGGTAGAGCAACGGCCTT 20 121 0 GCGGTAGCTCAGCTGGGAGAGCGCCGATATG 20 210 0 AATTACAAAGAGCAGTAAAAGAATTGCTACT 21 243 1 ****** **** MAP Score: 19.9262 Motif 5 GCAGGGTTATGCCCTTACAATAAGGGATTGCGACATTTCT 0 18 1 TCAATGTTATGCCCTTACAATAAGGGATTGCGACATTTCT 0 85 1 TCAATGTTATGCCCTTACAATAAGGGATTGCGACTTTGCT 0 152 1 CATACGTTACGCCCTAACAGTAAGGGATCGTGATAAAATT 0 217 1 AGGAAGGTATTATAAGGGAAAGGGAAGGGGA 4 9 0 CAAGTATAAAAGATACAGGACAAAGGGTTAAAG 12 3 1 CCTTGTCCCCCTTTTAAAAATAAAGGATAATTCTCTT 12 141 1 GGAACAAAGGGAAGTTAACATACAGGACGAGCTGTTAAAC 13 66 1 CACCCCGTCAGGTTAAAGATTATAGGAATACTCATTGAGG 14 84 1 GAAAATCTACGAATTAATTGTAAAGGAGGAAGAAC 14 275 1 AACTTGAATATCTTAAAGGAGAGTTTATCATCT 17 16 0 TTTCTGGAATCTATGAAAAATACGGGAAAATTAACCCTCT 21 88 1 GAACTGCCACGTATGTATAGTAAAGTACAACCCTGCCAAT 21 153 0 * ** ** **** * MAP Score: 19.0594 Motif 6 TTCTTTAGTTAGGGGGTGTGGCGGAATTGGC 1 85 0 ATTTCACGAAAGGAGGTAGAAAATGGTAGAG 3 62 1 ATGGGACTGAAGGAGGGGAAAAGGGCAAAAA 3 171 1 TTTTAGAGTTAGGAGGTAAGAGA 6 25 1 GCCGGCTTGAAGGAGGTTTGTA 8 28 1 ACTTAGCTTCAGGAGGTAAAGTTAGGT 9 16 1 ACTCTAATTAAAGGGGTGAAAAGCC 10 130 1 TCTTTTGCAAAGGAGGTGTGAAAG 11 63 1 TTAAATCTTCAGGAGGTTTGAGTTATGTATC 13 31 1 AGTATTTCTAACGAGGGGAAACAGGATAGTG 13 135 1 CTTTAACCTGACGGGGTGGGAAAGTGCCTTA 14 71 0 CACGGGGCATAGTAGGTTGGAAGAGAGAAGG 14 205 1 TTAATTGTAAAGGAGGAAGAAC 14 288 1 AACAAAAAGAAGGAGGTGGAAA 16 1 0 TGTCGGAGGTCGGGGGTTCGAGTCCCCTCCG 20 176 0 CTATTCTGTCAGTAGGGGCGGTAGCTCAGCT 20 227 0 TTTAGACCGCAGGAGGTGCCCTTGCGTCTTT 21 20 1 ******** ** MAP Score: 17.8746 Motif 7 GGTTGGGTGGTGGGGGTGGAGGGAGTCG 1 4 1 TGGCGGAATTGGCAGACGCGGGGGACTTAAAATC 1 64 0 AGGTCCATGGGACTGAAGGAGGGGAAAAGGGCAA 3 165 1 AAATACTTATGAAGAACGGAAGGGTTTACCTTCT 3 199 1 AAAAAATTCTGTCTGGAGGAAGTTA 5 51 1 CCAACTGCCGGCTTGAAGGAGGTTTGTA 8 22 1 ATAATCTTTAACCTGACGGGGTGGGAAAGTGCCT 14 73 0 AATTAAGTTTAGTAAACGGAGGTTTTT 15 45 1 TAGATAAACAAAAAGAAGGAGGTGGAAA 16 4 0 TAGTTATATGGTGAGCCGGGCGGGACTCGAACCC 20 71 1 CTTTTAAGCCGTGGGTCGCGGGTTCGAGTCCCGC 20 90 0 AGCTCAACTGGTGGAGCGGAGGGGACTCGAACCC 20 160 1 ATGGCATGTCGGAGGTCGGGGGTTCGAGTCCCCT 20 179 0 TTTCTATTCTGTCAGTAGGGGCGGTAGCTCAGCT 20 227 0 GGAATTTTTAGACCGCAGGAGGTGCCCTTGCGTC 21 14 1 * * ******** MAP Score: 17.2128 Motif 8 TTTAGTAAACGGAGGTTTTT 15 52 1 GAATTTCACGGAAAGGTTTTC 18 62 1 TTAGAAACGCGAAGGTTTTTACAGCTCACT 10 70 0 GCTGGGCTGGGAAAGGTTTAATAGTTCTCC 14 147 0 ATGAAGAACGGAAGGGTTTACCTTCTGAAA 3 207 1 CCGGCTTGAAGGAGGTTTGTA 8 29 1 AGGATAGTGGGAAAGGTTCTCGACCACGAC 13 157 1 AACTTGACACGAAAGGTTGTCCAGGAATAA 11 28 1 TAAATCTTCAGGAGGTTTGAGTTATGTATC 13 32 1 AAGAGCTGGCGGAATTTTTTAAGGCACTTT 14 52 1 CCTTTTAAATGAAGGTTTCAAGTATCTATA 20 268 1 ACATTGATTGGGAAATTTTTTTAAATGCAC 0 62 0 ACATTGATTGGGAAATTTTTTTAAATGCAC 0 129 0 TTTTGGAATTTTTAGACCGCAGGA 21 4 1 AGGAAGGTATTATAAGGGAAA 4 20 0 ATATCTTAAAGGAGAGTTTATCATCTTAAC 17 12 0 GTAAATTTGGGGAAATTTTATCACGATCCC 0 240 0 AACGGAAGTTATAATTTATTCTT 13 3 1 GATTTCTTGAGAAAAGTTCTTTCTATAAGT 1 125 0 ********** MAP Score: 16.8289 Motif 9 ACATTGATTGGGAAATTTTTTTAAATGCACAGAAAG 0 56 0 ACATTGATTGGGAAATTTTTTTAAATGCACAGAAAG 0 123 0 TAGAAAAAGCACAAATACAAGTAAATTTGGGGAAAT 0 254 0 CCCTAACTAAAGAAATATATTATACTTATAGAAAGA 1 102 1 ACGAAAACGAAGAAAATCCTGTAATTCAAAAGCTCA 3 130 1 TCCTAACTCTAAAAATTTATTAAAGTTAA 6 3 0 GACACAGATCAGAAATAAAATAAATTCTTTTGAGTG 7 40 1 CGTTTCTAACATAAATTTGTTATAATATCAATTTGC 10 91 1 TTATGAATGCATAAAATGTCTTAATTTTCAAAAATG 12 59 1 TTAAACATATAAAAATTAGTTTAAGTCTTAAGTCCT 12 108 1 TCCCCCTTTTAAAAATAAAGGATAATTCTCTT 12 146 1 AAACTCTTGTAAAAATTAAATTAATTCTTGA 13 279 1 CCAAAAGGAAAATATGATATATTCTTTATAAAG 15 7 1 TCTTTATAAAGAAAATTAAGTTTAGTAAACGGAGGT 15 32 1 CATAGATTCCAGAAAAGCTTTTAATTTCACCGTCCC 21 67 0 GGAATCTATGAAAAATACGGGAAAATTAACCCTCTT 21 93 1 * **** **** * MAP Score: 14.282 Motif 10 ATGTCGCAATCCCTTATTGTAAGGGCATAACCCTGCAC 0 16 0 AGGGATTGCGACATTTCTTTCTGTGCATTTAAAAAAAT 0 40 1 ATGTCGCAATCCCTTATTGTAAGGGCATAACATTGATT 0 83 0 AGGGATTGCGACATTTCTTTCTGTGCATTTAAAAAAAT 0 107 1 AAGTCGCAATCCCTTATTGTAAGGGCATAACATTGATT 0 150 0 TTATCACGATCCCTTACTGTTAGGGCGTAACGTATGCC 0 215 0 GTATTTTTGCCCTTTTCCCCTCCTTCAGTCCCATGGAC 3 167 0 TCCCCTTCCCTTTCCCTTATAATACCTTCC 4 2 1 TTATATGTTTAATTTACCATTTTATCATTTTTGAAAAT 12 82 0 CCTGTATGTTAACTTCCCTTTGTTCCATAGGATACATA 13 54 0 TGGTCGAGAACCTTTCCCACTATCCTGTTTCCCCTCGT 13 145 0 TTTTTAAGGCACTTTCCCACCCCGTCAGGTTAAAGATT 14 67 1 AACTATTAAACCTTTCCCAGCCCAGCGTTTCTCAGCAC 14 151 1 GTTCTTCCTCCTTTACAATTAATTCGTAGATTTTCTT 14 273 0 AAGAACTTAGCCTTTTCTATTAACTCAT 18 0 0 GCTTAAAAGGCCGTTGCTCTACCAACTGAGCTACCGGC 20 115 1 GCAGGGTTGTACTTTACTATACATACGTGGCAGTTCGG 21 157 1 GTTCGGGTGTACTTTCCCGTCGTTATGTTTATGAGTGA 21 189 1 ** ** ** * *** MAP Score: 14.19 Motif 11 TGCATTTAAAAAAATTTCCCAATCAATGTT 0 63 1 TGCATTTAAAAAAATTTCCCAATCAATGTT 0 130 1 GGATCGTGATAAAATTTCCCCAAATTTACT 0 241 1 AAGTATTTTTGCCCTTTTCCCCTCCTTCAG 3 177 0 TCAGAAGGTAAACCCTTCCGTTCTTCATAA 3 205 0 TCCCCTTCCCTTTCCCTTATAATACC 4 6 1 CGTGGTCGAGAACCTTTCCCACTATCCTGT 13 155 0 ATTTTTTAAGGCACTTTCCCACCCCGTCAG 14 65 1 AGAACTATTAAACCTTTCCCAGCCCAGCGT 14 149 1 GAAAACCTTTCCGTGAAATTCCC 18 60 0 CAGTTCGGGTGTACTTTCCCGTCGTTATGT 21 187 1 GAGTGAGAGAAACCTGTCCCTCAATTACAA 21 221 1 ********** MAP Score: 13.9507 Motif 12 TTTACAATAATGCTCTTTGGACTTGACACAA 3 8 1 GTTTAAATCTCTTTGAAAAAGAAGTGA 5 4 1 TACAAACCTCCTTCAAGCCGGCAGTT 8 24 0 ATAATAAATTAACACTTCTTTAAGCCAGTATTG 10 20 0 AGTATTTCTTAATAGTCCTTTAACCCTTTGTCC 12 27 0 ACAGGTACACCATTCTCCTTGAAGTTGAAGGAC 13 185 1 TGAACTTGATAAAACTCTTGTAAAAATTAAATT 13 268 1 AGATTATAGGAATACTCATTGAGGGAAAGCAGT 14 100 1 TAAGATGATAAACTCTCCTTTAAGATATTCAAG 17 14 1 AGATACTTGAAACCTTCATTTAAAAGGATTATA 20 262 0 CGGGAAAATTAACCCTCTTTGGAGATATTTCTG 21 110 1 TTGCTACTAAAATTCTCATTTAACGTTTAGTAT 21 266 1 ** *** ***** MAP Score: 11.8868 Motif 13 CAGGGTTATGCCCTTACAATAAGGGATTGCG 0 19 1 CAATGTTATGCCCTTACAATAAGGGATTGCG 0 86 1 CAATGTTATGCCCTTACAATAAGGGATTGCG 0 153 1 ATACGTTACGCCCTAACAGTAAGGGATCGTG 0 218 1 CCGCCACACCCCCTAACTAAAGAAATATATT 1 92 1 CCTTCCCTTTCCCTTATAATACCTTCCT 4 13 1 TCTCTTACCTCCTAACTCTAAAAATTTATT 6 18 0 ACCTAACTTTACCTCCTGAAG 9 22 0 ATATCAATTTGCCTTACTCTAATTAAAGGGG 10 115 1 CAGGGAACAACCATTACAGTATTTCTAACGA 13 118 1 ******** ** MAP Score: 11.2692 Motif 14 TGTCGCAATCCCTTATTGTAAGGGCATAACCCTGCA 0 17 0 TGTCGCAATCCCTTATTGTAAGGGCATAACATTGAT 0 84 0 AGTCGCAATCCCTTATTGTAAGGGCATAACATTGAT 0 151 0 TATCACGATCCCTTACTGTTAGGGCGTAACGTATGC 0 216 0 CCCTCACGGGCTTTTCGCCCAGGGGATTTTAAGTCC 1 40 1 ATAATATATTTCTTTAGTTAGGGGGTGTGGCGGAAT 1 89 0 TGGACCTGAGCTTTTGAATTACAGGATTTTCTTCGT 3 136 0 AAGCTCAGGTCCATGGGACTGAAGGAGGGGAAAAGG 3 159 1 AAATAATTAAACTTGACACGAAAGGTTGTCCAGGAA 11 19 1 ATAACTTTTTCTTTTGCAAAGGAGGTGTGAAAG 11 54 1 TATAATTTATTCTTAAATCTTCAGGAGGTTTGAGTT 13 19 1 TGTTAACTTCCCTTTGTTCCATAGGATACATAACTC 13 50 0 CCATTACAGTATTTCTAACGAGGGGAAACAGGATAG 13 128 1 ACACCATTCTCCTTGAAGTTGAAGGACAGCCTCACC 13 191 1 TTCCTATAATCTTTAACCTGACGGGGTGGGAAAGTG 14 76 0 TAACGCACTGCTTTCCCTCAATGAGTATTCCTATAA 14 103 0 ACCCTGTCGTCTTTAATATAGTAGCATATAATCGAG 14 236 0 GAGCAACGGCCTTTTAAGCCGTGGGTCGCGGGTTCG 20 98 0 ATACTTGAAACCTTCATTTAAAAGGATTATAATTTC 20 257 0 TTTTGGAATTTTTAGACCGCAGGAGGTGCCCTTG 21 8 1 TTTTACTGCTCTTTGTAATTGAGGGACAGGTTTCTC 21 227 0 **** * * **** MAP Score: 10.4515 Motif 15 CTCCCTCCACCCCCACCACCCAACC 1 0 0 GGGAGTCGAACCCTCACGGGCTTTTCGCCCAGGGG 1 30 1 AGTCCCCCGCGTCTGCCAATTCCGCCACACCCCCT 1 71 1 CTTTTAAGCCCTCTACCATTTTCTACCTCCTTTCG 3 68 0 TATTTTTGCCCTTTTCCCCTCCTTCAGTCCCATGG 3 169 0 AGAAGGTAAACCCTTCCGTTCTTCATAAGTATTTT 3 198 0 TCCCCTTCCCTTTCCCTTATAATACCT 4 2 1 TCTCTTACCTCCTAACTCTAAAAATT 6 22 0 AAAAGTTATTCCTGGACAACCTTTCGTGTCAAGTT 11 28 0 GTCTTAAGTCCTTGTCCCCCTTTTAAAAATAAAGG 12 132 1 TGGTCGAGAACCTTTCCCACTATCCTGTTTCCCCT 13 148 0 ATTCCGCCAGCTCTTCGAGCTTTTCCTCGCTCAAA 14 32 0 TTTTAAGGCACTTTCCCACCCCGTCAGGTTAAAGA 14 68 1 ACTATTAAACCTTTCCCAGCCCAGCGTTTCTCAGC 14 152 1 CGAGCCTTCTCTCTTCCAACCTACTATGCCCCGTG 14 205 0 GGCAGGGCTTCCTGAAGAACTTAGCCTTTTCTATT 18 17 0 GGGTTCGAGTCCCGCCCGGCTCACCATATAACTAT 20 70 0 CCGGGCGGGACTCGAACCCGCGACCCACGGCTTAA 20 86 1 AAGGCCGTTGCTCTACCAACTGAGCTACCGGCTCT 20 121 1 GGGTTCGAGTCCCCTCCGCTCCACCAGTTGAGCTG 20 159 0 GCGGAGGGGACTCGAACCCCCGACCTCCGACATGC 20 175 1 CATATCGGCGCTCTCCCAGCTGAGCTACCGCCCCT 20 210 1 TAAAGTACAACCCTGCCAATTACGAAAAGCCAGAA 21 138 0 **** *** ** * MAP Score: 9.36063 Motif 16 AAATGCACAGAAAGAAATGTCGCAATCCCTT 0 39 0 CTGTGCATTTAAAAAAATTTCCCAATCAATG 0 60 1 AAATGCACAGAAAGAAATGTCGCAATCCCTT 0 106 0 CTGTGCATTTAAAAAAATTTCCCAATCAATG 0 127 1 CCCCCTAACTAAAGAAATATATTATACTTAT 1 100 1 TAAAAGAAGGAAAAGAATTTCTTATTCTCGG 3 97 1 ATAGTTATAGACAAAAATTTATTTGATCTCC 3 252 1 ATCTCTTTGAAAAAGAAGTGAGAATGTTTTA 5 16 1 CACTCAAAAGAATTTATTTTATTTCT 7 50 0 CCAAAAGGAAAATATGATATATTC 15 3 1 ATTTTCTTTATAAAGAATATATCATATTTTC 15 17 0 TATTCTTTATAAAGAAAATTAAGTTTAGTAA 15 29 1 AAAGAGCAGTAAAAGAATTGCTACTAAAATT 21 249 1 ******** ** MAP Score: 4.36925 Motif 17 GTCCATGGGACTGAAGGAGGGGAAAAGGGC 3 167 1 AAGGGTTTACCTTCTGAAAGTTGACAATAC 3 218 1 ATTTGATCTCCTTAAGAAGGAGGCTCACTG 3 272 1 AAAATTCTGTCTGGAGGAAGTTA 5 53 1 CAACTGCCGGCTTGAAGGAGGTTTGTA 8 23 1 AAATACTTAGCTTCAGGAGGTAAAGTTAGG 9 12 1 TCAATACTGGCTTAAAGAAGTGTTAATTTA 10 19 1 TTAAGAAATACTTATGAATGCATAAAATGT 12 48 1 ATTCTTAAATCTTCAGGAGGTTTGAGTTAT 13 27 1 TGTCCTTCAACTTCAAGGAGAATGGTGTAC 13 189 0 ACTTGAATATCTTAAAGGAGAGTTTATCAT 17 18 0 AGGCTAAGTTCTTCAGGAAGCCCTGCCTTA 18 25 1 AGCAGCTCAACTGGTGGAGCGGAGGGGACT 20 157 1 CCAGAAATATCTCCAAAGAGGGTTAATTTT 21 114 0 ********** MAP Score: 4.35264 Motif 18 CCCTTATTGTAAGGGCATAACCCTGCACGC 0 14 0 CCCTTATTGTAAGGGCATAACATTGATTGG 0 81 0 CCCTTATTGTAAGGGCATAACATTGATTGG 0 148 0 TCGAACCCTCACGGGCTTTTCGCCCAGGGG 1 35 1 TACTTATAGAAAGAACTTTTCTCAAGAAAT 1 124 1 GTCAAGTCCAAAGAGCATTATTGTAAA 3 7 0 TAAAAGAAGGAAAAGAATTTCTTATTCTCG 3 97 1 CTTTTGAATTACAGGATTTTCTTCGTTTTC 3 132 0 AGGAGGGGAAAAGGGCAAAAATACTTATGA 3 181 1 TTCTTTTTCAAAGAGATTTAAAC 5 3 0 CACTCAAAAGAATTTATTTTATTTC 7 51 0 CAAAGGGTTAAAGGACTATTAAGAAATACT 12 30 1 AAAGGGGGACAAGGACTTAAGACTTAAACT 12 125 0 AAGAGAATTATCCTTTATTT 12 158 0 CTATGGAACAAAGGGAAGTTAACATACAGG 13 62 1 AACATACAGGACGAGCTGTTAAACAGGTTC 13 82 1 ATGATAAGAGAAGAGCTTTTGAGCGAGGAA 14 15 1 ATTCTTTATAAAGAAAATTAAGTTTAGTAA 15 30 1 TGCCTTACATACGGGAATTTCACGGAAAGG 18 48 1 CGGTGAAATTAAAAGCTTTTCTGGAATCTA 21 71 1 CTCAATTACAAAGAGCAGTAAAAGAATTGC 21 240 1 TAAACGTTAAATGAGAATTTTAGTAGCAAT 21 265 0 ********** MAP Score: 4.21743 Motif 19 CTCCCTCCACCCCCACCACCCAACC 1 0 0 CCGTGAGGGTTCGACTCCCTCCACCCCCACCACCC 1 14 0 CGTCTGCCAATTCCGCCACACCCCCTAACTAAAGA 1 80 1 TCCCCTTCCCTTTCCCTTATAATACC 4 1 1 GTGGGAAAGGTTCTCGACCACGACAGGTACACCAT 13 163 1 TTTTTTAAGGCACTTTCCCACCCCGTCAGGTTAAA 14 66 1 CCGGGCGGGACTCGAACCCGCGACCCACGGCTTAA 20 86 1 GGGTTCGAGTCCCCTCCGCTCCACCAGTTGAGCTG 20 159 0 GCGGAGGGGACTCGAACCCCCGACCTCCGACATGC 20 175 1 *** *** * *** MAP Score: 1.77058 Motif 20 CTCCCTCCACCCCCACCACCCAACC 1 0 0 CGTCTGCCAATTCCGCCACACCCCCTAACTAAAGA 1 80 1 TTTTCCTTCTTTTAAGCCCTCTACCATTTTCTACC 3 76 0 TATTTTTGCCCTTTTCCCCTCCTTCAGTCCCATGG 3 169 0 AGAAGGTAAACCCTTCCGTTCTTCATAAGTATTTT 3 198 0 TTACAGCTCACTTTAGCCCACCGCAAACTATAATA 10 47 0 GGCTTTTCACCCCTTTAATTAGAGTAA 10 128 0 CTTTCACACCTCCTTTGCAAAAGAAA 11 61 0 GTCTTAAGTCCTTGTCCCCCTTTTAAAAATAAAGG 12 132 1 TTTGAACCTGTTTAACAGCTCGTCCTGTATGTTAA 13 80 0 TTTTATCAAGTTCATCCACCCTCTACTATGGTAGA 13 247 0 CTTTTCCTCGCTCAAAAGCTCTTCTCTTATCATCC 14 13 0 CTTAAAAAATTCCGCCAGCTCTTCGAGCTTTTCCT 14 40 0 TTTTAAGGCACTTTCCCACCCCGTCAGGTTAAAGA 14 68 1 TCTCCCAGGTTTTTAACGCACTGCTTTCCCTCAAT 14 117 0 CAGCCCAGCGTTTCTCAGCACCTCTCGATACTCAA 14 168 1 CGAGCCTTCTCTCTTCCAACCTACTATGCCCCGTG 14 205 0 TTTCCACCTCCTTCTTTTTGTTTAT 16 0 1 CCGGGCGGGACTCGAACCCGCGACCCACGGCTTAA 20 86 1 GCTACCGGCTCTTAGCAGCTCAACTGGTGGAGCGG 20 144 1 GGGTTCGAGTCCCCTCCGCTCCACCAGTTGAGCTG 20 159 0 GCGGAGGGGACTCGAACCCCCGACCTCCGACATGC 20 175 1 *** **** * ** MAP Score: 1.06855