AlignACE 3.0 10/20/99
AlignACE2 -i AG/AG_fusions023_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944241639
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	AF0384	97	conserved hypothetical protein
#1	AF0385	28	conserved hypothetical protein
#2	AF0388	61	conserved hypothetical protein
#3	AF0795	96	conserved hypothetical protein
#4	AF0797	35	conserved hypothetical protein

Motif 1
CAGCGGAGCACCAAGACGTAGGAGGTCACGCCGA	0	32	1
GAAAGTAGAGCCAAGACTTATAAATGGACACCTT	0	64	1
ATCAAAATCTACATGAGCTGGGAGAGAGGGCTGA	2	21	1
TAGTCGAACACCAAGAAATGGAAAGATATTTTAA	3	33	0
        AGCCAAGAGTTTGCAGAGGTTAAAAA	4	19	0
          ******  * * **
MAP Score: 9.01033