AlignACE 3.0 10/20/99
AlignACE2 -i AG/AG_fusions024_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944241642
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	AF1699	102	pyruvate ferredoxin oxidoreductase, subunit gamma (porG)
#1	AF2055	32	2-ketoisovalerate ferredoxin oxidoreductase, subunit gamma (vorG)
#2	AF2056	35	conserved hypothetical protein

Motif 1
ACCAGAATCGGCATTTAAAATATTTTTTTAG	0	26	1
GGTTTTGAAAGCTAAAAAAATATTTTAAATG	0	37	0
ATGCTTAAAAGAATAAAAAATTAACGGAAAA	0	68	0
AACGGTAGCAGATATAAAAAT          	1	0	0
GCCTTAACACGCAGAAAATATAAGGTTTTGG	2	11	0
          *** *******
MAP Score: 7.344