AlignACE 3.0 10/20/99 AlignACE2 -i AG/AG_operons001_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944241677 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 AF0006 104 corrinoid methyltransferase protein (mtaC-1) #1 AF0008 73 oxalate/formate antiporter (oxlT-1) #2 AF0014 95 A. fulgidus predicted coding region AF0014 #3 AF0016 54 A. fulgidus predicted coding region AF0016 #4 AF0018 22 3-ketoacyl-CoA thiolase (acaB-1) #5 AF0028 31 conserved hypothetical protein #6 AF0029 300 conserved hypothetical protein #7 AF0089 300 long-chain-fatty-acid--CoA ligase (fadD-1) #8 AF0130 72 acetylpolyamine aminohydrolase (aphA) #9 AF0188 300 conserved hypothetical protein #10 AF0196 131 medium-chain acyl-CoA ligase (alkK-1) #11 AF0197 86 acetyl-CoA synthetase (acs-1) #12 AF0236 142 A. fulgidus predicted coding region AF0236 #13 AF0262 189 medium-chain acyl-CoA ligase (alkK-2) #14 AF0283 168 3-ketoacyl-CoA thiolase (acaB-7) #15 AF0286 75 electron transfer flavoprotein, subunit beta (etfB) #16 AF0366 218 acetyl-CoA synthetase (acs-2) #17 AF0438 79 3-ketoacyl-CoA thiolase (acaB-8) #18 AF0439 82 transcriptional regulatory protein, AsnC family #19 AF0442 300 succinoglycan biosynthesis regulator (exsB) #20 AF0464 300 bacteriochlorophyll synthase, 43 kDa subunit (chlP-1) #21 AF0498 197 acyl-coA dehydrogenase (acd-3) #22 AF0563 142 conserved hypothetical protein #23 AF0568 300 A. fulgidus predicted coding region AF0568 #24 AF0672 27 medium-chain acyl-CoA ligase (alkK-3) #25 AF0673 155 mercuric resistance operon regulatory protein (merR) #26 AF0677 165 acetyl-CoA synthetase (acs-3) #27 AF0685 140 enoyl-CoA hydratase (fad-2) #28 AF0687 228 long-chain-fatty-acid--CoA ligase (fadD-3) #29 AF0840 125 long-chain-fatty-acid--CoA ligase (fadD-4) #30 AF0845 73 acyl-CoA dehydrogenase (acd-5) #31 AF0846 112 Na+/H+ antiporter (nhe2) #32 AF0968 205 3-ketoacyl-CoA thiolase (acaB-10) #33 AF0970_AF0971 101 AF0970: A. fulgidus predicted coding region AF0970, AF0971: conserved hypothetical protein #34 AF0973 108 bile acid-inducible operon protein F (baiF-1) #35 AF0990 211 L-carnitine dehydratase (caiB-2) #36 AF0991 260 glutaryl-CoA dehydrogenase (gcdH) #37 AF1025_AF1026 150 AF1025: 3-hydroxyacyl-CoA dehydrogenase (hbd-4), AF1026: acyl-CoA dehydrogenase (acd-7) #38 AF1029 193 long-chain-fatty-acid--CoA ligase (fadD-5) #39 AF1069 90 pantothenate permease (panF-1) #40 AF1070 95 coenzyme F390 synthetase (ftsA-1) #41 AF1122 111 3-hydroxyacyl-CoA dehydrogenase (hbd-5) #42 AF1141 35 acyl-CoA dehydrogenase (acd-8) #43 AF1142 221 glucose-1-phosphate cytidylyltransferase (rfbF) #44 AF1173 180 A. fulgidus predicted coding region AF1173 #45 AF1174 61 A. fulgidus predicted coding region AF1174 #46 AF1177 103 3-hydroxyacyl-CoA dehydrogenase (hbd-6) #47 AF1191 32 dihydroxynaphthoic acid synthase (menB) #48 AF1192 50 conserved hypothetical protein #49 AF1195 27 activator 1, replication factor C, 53 KD subunit #50 AF1196 65 N5,N10-methylenetetrahydromethanopterin reductase (mer-2) #51 AF1197 300 3-ketoacyl-CoA thiolase (fadA-2) #52 AF1205 53 pantothenate permease (panF-2) #53 AF1208 165 conserved hypothetical protein #54 AF1216 101 lysyl-tRNA synthetase (lysS) #55 AF1222 85 proline permease (putP-3) #56 AF1261 133 medium-chain acyl-CoA ligase (alkK-4) #57 AF1286 257 acetoin utilization protein, putative #58 AF1287 300 acetyl-CoA synthetase (acs-6) #59 AF1289 300 conserved hypothetical protein #60 AF1315 48 bile acid-inducible operon protein F (baiF-3) #61 AF1510 24 long-chain-fatty-acid--CoA ligase (fadD-6) #62 AF1512 71 conserved hypothetical protein #63 AF1513 257 A. fulgidus predicted coding region AF1513 #64 AF1538 156 conserved hypothetical protein #65 AF1641 31 enoyl-CoA hydratase (fad-4) #66 AF1642 50 histidyl-tRNA synthetase (hisS) #67 AF1667 158 sulfate adenylyltransferase (sat) #68 AF1669 48 adenylylsulfate reductase, subunit B (aprB) #69 AF1671 64 coenzyme F390 synthetase (ftsA-2) #70 AF1855 180 2,3-dihydrosybenzoate-AMP ligase (entE) #71 AF1928 142 tungsten formylmethanofuran dehydrogenase, subunit D (fwdD-2) #72 AF1932 84 long-chain-fatty-acid--CoA ligase (fadD-8) #73 AF1933 47 monoamine oxidase regulatory protein, putative #74 AF1934 78 conserved hypothetical protein #75 AF1935 49 N5,N10-methenyltetrahydromethanopterin cyclohydrolase (mch) #76 AF1936 35 conserved hypothetical protein #77 AF1937 112 cell division inhibitor (minD-2) #78 AF2013 275 coenzyme F390 synthetase (ftsA-3) #79 AF2014 63 sugar transporter, putative #80 AF2033 128 medium-chain acyl-CoA ligase (alkK-5) #81 AF2057 35 acyl-CoA dehydrogenase (acd-10) #82 AF2243 38 3-ketoacyl-CoA thiolase (fadA-3) #83 AF2244 300 acyl-CoA dehydrogenase (acd-11) #84 AF2271 177 A. fulgidus predicted coding region AF2271 #85 AF2272 87 A. fulgidus predicted coding region AF2272 #86 AF2273 57 3-hydroxyacyl-CoA dehydrogenase (hbd-10) #87 AF2275 63 acyl-CoA dehydrogenase (acd-12) #88 AF2277 49 DNA polymerase, bacteriophage-type #89 AF2295 43 group II decarboxylase #90 AF2297 126 cytochrome oxidase, subunit I (cydA-2) #91 AF2311 108 conserved hypothetical protein #92 AF2313 45 maoC protein (maoC) #93 AF2364 102 ABC transporter, ATP-binding protein #94 AF2368 40 long-chain-fatty-acid--CoA ligase (fadD-9) #95 AF2369 33 A. fulgidus predicted coding region AF2369 #96 AF2370 170 conserved hypothetical protein #97 AF2389-C 300 acetyl-CoA synthetase, putative #98 AF2416 115 3-ketoacyl-CoA thiolase (acaB-12) #99 AF2426 85 conserved hypothetical protein #100 AF2429 30 enoyl-CoA hydratase (fad-5) Motif 1 TTAAGTTCAGTTAAAAGCTTTTTGAAAAGAGC 8 22 1 TAAGTATTTTTTAAAAACTTTTCTCTTCTAGT 29 91 0 GCAAGGGTGTTTAAAAGGTTTTAGAGTTGAGC 66 16 0 CCTTTAATCATTAAAATATTTTTCGAAACCTT 67 96 1 TTCAGGTGAATTAAAAGCTTTTTTGATGTTCA 31 32 1 GTAGTGTTTATTAAAAGTTTTTTTTATATATC 71 34 0 ACGCTTTTTATTTAAACCTTTTTCCCAACTTT 54 29 1 ATTTAAATTTTTTCATTTATGAA 33 88 0 TTGCGAAAGATTTAAAACTTTTCGGTAGGAGT 37 16 0 TTTTCAGCCTTTTAAAACTTTTCGCTTTTTAC 38 157 0 ACAAATCATTTTATAAAATTTTTTTTAATTAA 2 15 1 GTTGACTAAGTTTTAACCTTTTTCTTTTTTGT 84 142 0 ATAACTCTCCTTTTAACATTTTTC 43 207 1 TTGAAGAGTATTTTAATCTTTTGAGATTACAA 45 25 0 AGGCAATGCAATAAAAACTTTTAGATTTAGAA 69 30 0 ATGGTGGCATATAAAAAATTTTTTTATTTGTT 84 22 1 CGTAAAATTAATAAAATCTTTTGTATT 87 46 1 CACAGCGCGGATAAAATATTTT 95 0 0 TATTTTAATGATTAAAGGTTTTCGAATTTTCA 67 82 0 CAGAACGACCATTAAAGATTTTGCAGCAAACT 14 50 0 TTTTAAAATAATTAAATTTTTTGTATTGCTGC 77 76 0 TTCTGAAAACTTAAAACTTTTCATTTAATTCA 58 209 1 ATCTTTAATTTTAAAAAATTTCCTAAACTACC 70 70 0 GCCAAATCCCTTAAAAAATTTCCCGATTAAAG 70 147 0 GGTTTAAAACTTAAAAATTTTCCGACAGAGTC 74 37 0 ATAATTACTATTTAAAGTTTTCCTTTCTTTTT 63 221 0 AAGGTAACTATTTAAAAGTTTCGGGAAAAAAA 9 264 0 AATTAGGGATTTAAAATGCTTTTCAGATGATT 77 22 1 TTTGCGAAAATTAAAACACTTTTGCGCAAATT 16 95 0 GAGTGTTGATTTAAAAAACTTTCCCTTGATTT 40 59 0 GGCAGTGGCTTTTAAAGCCTTTTGCTGCAAAC 78 184 1 TTGTGTTCTATTTAAATCCTTTTTCAATTGTT 83 239 1 ACTAAGGACTATATAAATTTTTTTGCATTTAG 25 46 1 CACGCAGAAAATATAAGGTTTTGGT 81 20 1 GCAAAGGAGTTCAAAAAATTTTCTAC 67 4 0 TAAGACTTCCTCAAAAACTTTTGGTGATAGG 71 121 1 TATGCCCACCTCAAAATTTTTTCCCACCTGAC 44 82 0 AATTCAAACCATTTAAGCTTTTCCATAATTAT 44 32 1 TATGCTGACAATTTAACCTTTTCTAAAAAGAT 70 33 1 TCTACATAAAATTTAATCTTTTCGTTCGATTA 90 94 0 TTTTATCTCAATTTAAGATTTTGATTTGACAT 37 48 1 GTCGTGTAATATTTAATGTTTTCGTGAAATAT 17 46 0 AAAAACATTCTCTAAAATTTTTTCCGAATATC 91 14 1 AGCTCTAAAATTTTTCTTTTTTCTA 69 3 1 CTTTAGGACTTTATAATATTTCCCATCTAATG 25 118 0 TTTTTAACTTTTCTTTGTCAATT 3 1 1 GCAAACCGAAATAAAAAATTTCCTATTTTTAA 15 29 0 ATTTTTAGCTTTTTAATTCTTTAAATTTCC 79 43 1 AATTTTTAAGTTTTAAACCTTTACAAGGAGGT 74 50 1 TTTACTCAACATAAAAGCCTTTCTTTATTTTG 14 135 0 TATATCTGATTCTTAAAATTTTAAAGATAAAA 21 122 1 TAGCGAAATTTCTTAATATTTTTTGTTACACT 92 17 1 AGAGTATTAGACAAAACATTTTTAACTAACAA 26 25 0 GGAGGCAGGATTTAAATACTTCACCATCCTGA 78 227 0 TTCCTGAGCTATTTAATGTTTCGTGAGTTTTC 93 67 0 AAATCTGGCAATATAAAGCTTTTGCAGATACA 33 24 1 TTAAAAGCAAATTTAAAGCTTTATTAGGATTT 36 72 1 TTAATGGCAAACATAAAATTTTTATATTTTTA 18 45 1 GGCAGAGCAAACTTAAATTTTTTGGATATATA 14 89 1 ATCACGCACTTTATAAATCTTCAAAACAATTC 60 21 1 ****** **** MAP Score: 56.1773 Motif 2 ATAGGGAGTCAAAATGAAAAATAATTACCTG 9 222 0 TGGTTAAACAAAAAAGAAAAAGGTTAAAACT 84 135 1 CATGGAAGAGAAAAAGAAAAAGGAGTACTAC 90 23 0 TTGCCATGGAAAAAGGAAAAAATGCAAATAT 20 167 0 TAGATTTAGAAAAAAGAAAAATTTTAGAGCT 69 10 0 TTATAAAACAAAAAAGAAAAAA 72 1 0 ATAACGAATAAAATGGAAAAACTTAATACAT 86 36 1 TTAAAGTTTGAAATCGAAAAACTTATACATT 34 25 1 CTGGTTCATAAATAAGAAAAAA 1 1 0 ATGGTATTTTAATAAGAAAAAAGTGAAGGAG 51 272 1 ATTAAAAAGGAAAATAAAAAAGAG 74 3 0 AATCTGCTGAAAAACAAAAAAGTTGGAAAAT 56 24 0 TCGCTTGAACAATTCGAAAAATCTGTTAAAG 53 37 0 TAAGTAAATTAATTCGAAAAATTATTATGTC 56 83 1 TTTAGAAAATAATTCGAAAAAAG 62 2 0 TAATCAAAACAAATAAAAAAATTTTTTATAT 84 30 0 TTGTGTTCATAAATGAAAAAATTTAAAT 33 83 1 AAATTTTTTTAAAATTAAAAATTGACACCAA 28 204 1 AAGATAAAAAATAAAAACTCCAATGTT 75 6 1 ACAAAAATATAAAAATAAAAAT 32 1 0 ATCTGTTGGAAAAAATAAAAATTAAAA 50 6 0 AAAAATTAAAAATTAAGTTCAG 8 1 1 GTTCAGCAGCAATACAAAAAATTTAATTATT 77 71 1 AGTAAACTAAAAATATAAAAATTTTATGTTT 18 53 0 TTAGAATTATAATTTAAAAAAGTTTCTAAAG 64 104 0 ACAAAAAGTTAATTAAAAAAAATTTTATAAA 2 24 0 ACGTTTTTCAAATAATAAAAAAT 82 2 0 CAATATCTTTAATTTTAAAAAATTTCCTAAA 70 75 0 CAGATTTGTTAATTATAAAAA 33 0 0 ATTGTCTCTTAATTGTAAAAAGCTCATGATA 72 32 1 TTTAAATTATAATTCTAAAAATTAATACGGC 64 117 1 TTAACGATTAAAAATGAAAATTTTTGCGAAA 16 118 0 AAAGGTCTTTAAAACAAAAATTGAAGTTTCT 36 125 0 CAGCGTGTTAAAAACAAAAATATAAAAATAA 32 14 0 CCAGAATTCGAATTGGAAAATTCGTTCGTGA 21 13 0 AACACCTCCAAATTAGAAAATAGGCCTTCTA 0 80 0 TTACGAGAGCAAATGAAAAATCTAAACGCGT 32 85 1 GAGCAAACCGAAATAAAAAATTTCCTATTTT 15 32 0 AATTGATTTTAATTAAAAAATAAAGGTTTCG 89 16 0 **** ****** MAP Score: 37.0758 Motif 3 GGTTCGAATCCCACCCCCGGCGCTGTTGTATCT 63 96 1 GGTTCGAATCCCTCCCCCCGCACTGAATTCGGT 23 55 0 GAGGAAAGTCCCCCCACCCGCTGTGGCGGAAGG 7 163 0 AAATTCCATGCCCCCGCCGGGAGTTGAACCCGG 27 104 0 CGTTTCTGTTCCTCCTCCGCCCCTTCTCAGGGG 7 130 1 GCAGCCATCGCCACCTCCTGCGGTGTGCGGTGA 59 16 0 CCTCCTCCCCCTCGTAGTACTCC 90 0 1 TCAACCACCTCCGTGCCATGATGAGCA 15 58 0 GATGAAACGGCCTCCTCCCCGCCGGGTGCAACG 7 44 0 CGGCGACAATACGCCGCCGGCAGGATTCGAACC 13 32 1 AGCCAGATCCCCAACTCCCGGCCTTTCAATGTG 35 119 0 TCAGCAAGCTCCTCCACCTTCACCACTTCAAGT 83 151 1 TTTCGGTCAGCCGCCCACCGCCGCTCCCACTGT 7 197 1 GGTTCGAATCCCTCCCCCCGCATTTAGTTCTGT 19 131 0 CTCCAAAATACCACCTCCTGCAA 52 0 0 GAAAAGACCTTCTCCACCGCCTCAGCCTGAGGC 83 58 1 GAGGCGTAAGCCTCCTCTGGGTGAAACAATGCA 97 52 0 TGTCCGCTCGGCAACCCCCGCTCAGATGAAAAA 19 204 1 TGTCCGCTCGGCAACCCCCGCTCAGGGCCTATT 23 128 1 CTAACCATTGCCGCCTCTGCCTCTTTTGAGCAT 46 18 0 TTTTTCCACGTCGCCCCCGTGGGGTAGCGGATA 27 45 1 GAACCCTCGAACCCCTACGGGACAGGACCCTCA 19 159 1 GAACCCTCGAACCCCTACGGGACGGGACCCTGA 23 83 1 GCCATCATAGCCTACTACGGGGCAAAAAGGACG 55 56 1 AATACACCTCCTTCACTTTTTTCTTA 51 284 0 TGCTCTCTCAGCTCCTCCTTCAGCTCGTCCGAC 97 276 0 AGGGTTTTACCCGCCGCTGTGGGCATTGCGAGG 83 10 1 AATGCCACCTCCTTGTAAAGGTTTAAA 74 61 0 ** ** ***** * MAP Score: 33.3352 Motif 4 CGAAATAAAAAATTTCCTATTTTTAAAAATTTGAAAGGTGAA 15 13 0 AACGATTAAAAATGAAAATTTTTGCGAAAATTAAAACACTTT 16 105 0 GTCGTGTAATATTTAATGTTTTCGTGAAATATGAATTTTGCC 17 36 0 TAAAATTTGTTTTGACAACATTAAGTAAAGGTTATATACCAA 21 149 1 GTATTTGTTTTGTAGTTGTTAGTTAAAAATGTTTTGTCTA 26 8 1 TGTTTTGTCTAATACTCTAATTGAATAAAAGTTGACAGTTCA 26 39 1 CTAATAGATATATTTATTTATTGTTAAAATCTATTTTAAAAA 26 123 0 ATTGGTGTCAATTTTTAATTTTAAAAAAATTTACTATATTGA 28 194 0 AATTAAAAGCTTTTTTGATGTTCATGAAATTTCAAAATTGCA 31 40 1 TCTATTTTTAAATCGGCACATTACGTAAAATTTAAGTATTAA 32 169 1 TATTTCTACAATTTTTTAAAGTTTGAAATCGAA 34 1 1 TTTACTTTGGTTTATACTTCTTTGAGAAACTTCAATTTTTGT 36 101 1 TTGAAATTTATTTGAAAAAATTTCGTAAAAATAGTAAGAATT 37 83 1 CCATTCAAATTTTTCAGATTTTGCGAAAATATAATCCAAAAA 38 80 0 TTACGCCTCTATTACCATTTTTAGTAAAAAATTCCACTTTTG 41 11 1 GCTAAGATTTAATACGCTTTTTATTTAAACCTTTTTCCCAAC 54 16 1 TCATTGTTCATATGTCATTGTTCTGAAAACTTAAAACTTTTC 58 189 1 ACCTTTAATCATTAAAATATTTTTCGAAACCTTTATATAAGG 67 95 1 TTTAATTTTTTTTTAGAAAAATGTATGAAAAG 68 0 1 AGCTCTAAAATTTTTCTTTTTTCTAAATCTAAAAGTTTTT 69 8 1 TATGCTGACAATTTAACCTTTTCTAAAAAGATTTTGCGGTAG 70 33 1 CTAAAAAGATTTTGCGGTAGTTTAGGAAATTTTTTAAAATTA 70 55 1 TAAAGTTGGTAATGTTAAAATTGTTTAAATGTTGACAATGAA 70 110 0 AATAATAGTCTTTCGTAGTGTTTATTAAAAGTTTTTTTTATA 71 38 0 TGTAATGGAAATTGCAGAAATTACCAAAATTTTCTTATACTC 80 55 1 ATTTTTTATTATTTGAAAAACGTTTGCAGGGTG 82 1 1 TCCTTTTTCAATTGTTTAACTTGGCAAAATTTAAATAATCAC 83 255 1 AAAAAATTTTTTTATTTGTTTTGATTAAAATTTAATATCTCA 84 34 1 TTTTAAAAACATTCTCTAAAATTTTTTCCGAAT 91 1 1 AACAAAAAATATTAAGAAATTTCGCTAAATTTGA 92 2 0 *** * ** *** * MAP Score: 30.6647 Motif 5 TTACGAGAGCAAATGAAAAATCTAAACGCGTAAAAA 32 85 1 ATCAAAAAAGAAAGGAAAACTTTAAATAGTAATTAT 63 217 1 TCACGATTAAAAAGGAAAATAAAAAAGAG 74 3 0 AGAACCATGGAAGAGAAAAAGAAAAAGGAGTACTAC 90 23 0 TAAACAGCACAACCAAAAACAATAAAAACAACTTCT 12 81 1 TTTAATGGTTAAACAAAAAAGAAAAAGGTTAAAACT 84 130 1 GCCATGGAAAAAGGAAAAAATGCAAATATATTTGCT 20 160 0 TGTGTTCATAAATGAAAAAATTTAAAT 33 84 1 AGCGTGTTAAAAACAAAAATATAAAAATAAAAAT 32 8 0 CAATTTATAAAACAAAAAAGAAAAAA 72 0 0 AAATTTAAAGAATTAAAAAGCTAAAAATTTTATGCA 79 35 0 TATGAAAGTAAACTAAAAATATAAAAATTTTATGTT 18 54 0 GAAATAAACCAATCAAAAACCGCAAAAGTTATGTAG 97 88 0 AAAGTATGTCAAATCAAAATCTTAAATTGAGATAAA 37 49 0 TGACGAATATAAATGAGAAAAGGAAAGAATGGGAAG 58 156 0 TATATTTTGAAAATGAGAAGTTAAAATC 30 55 1 ATTTCGTAAAAAGCGAAAAGTTTTAAAAGGCTGAAA 38 152 1 GAATTGAATTAAATGAAAAGTTTTAAGTTTTCAGAA 58 209 0 TAAACGCTCAAAAAAAGAATGTTAAATACAGAAAAA 36 224 1 TCTGTTGGAAAAAATAAAAATTAAAA 50 0 0 AAATTAGCTCAAAGTAAAAAGCGAAAGGTATTTTAA 7 253 1 AAGATAAAAAATAAAAACTCCAATGT 75 0 1 AAACATTTTTAACTAACAACTACAAAACAAATAC 26 8 0 TTGCCCTCAGAAGCAACAATCTTAAATAATTGTTTA 13 150 1 ACCTATACCAAAGACACAATTCTAAATTATGATAGA 23 236 1 GTTCAGCAGCAATACAAAAAATTTAATTATTTTAAA 77 71 1 TCCTCGCCCAAAAAGAGAACGGTTAAATAGTATTTG 71 84 1 TTTTACAATTAAGAGACAATTTATAAAACAAAAAAG 72 16 0 ** ***** *** MAP Score: 26.7557 Motif 6 GGGGAGGAGGCCGTTTCATCCGGAGCGGGTGACCTCATCCTT 7 57 1 GGCGGAAGGCCCCTGAGAAGGGGCGGAGGAGGAACAGAAACG 7 130 0 TCTCAGGGGCCTTCCGCCACAGCGGGTGGGGGGACTTTCCTC 7 154 1 AGAAACATTACAGTGGGAGCGGCGGTGGGCGGCTGACCGAAA 7 197 0 CGGACGGTCGCAGGTTCGAATCCTGCCGGCGGCGTATTGTCG 13 35 0 TCGGTTTGCTCATCATGGCACGGAGGTGGTTGA 15 52 1 ACTCAACGAACAGAACTAAATGCGGGGGGAGGGATTCGAACC 19 122 1 CGGTCTCTGCGTGGTTAACTGTCCGGTGGAGACGATAGAGGT 20 88 1 TCCTCCAAAACCGAATTCAGTGCGGGGGGAGGGATTCGAACC 23 46 1 CTCCTCGACCCGGGTTCAACTCCCGGCGGGGGCATGGAATTT 27 95 1 GAGCTACAGTCTGATGGAGGAGCTGCTGGAAGGCTGGAAGAA 28 86 1 CAGCCTGCCCCAGTTCGAGAATGAGCAGGTTGTTGAAGGGCT 35 24 0 CATCGGAACTCTGCTGGCTGATCTGGGGGCTGAGGTAATTCA 35 79 1 TTGGGGGCAGCAGCGGTCATTGCAGCTGGAGAAATATACTGG 43 13 0 CTCTGCTCGACAGCCTGGCACTCCGCAGGGGAGTTGTTAGGG 57 217 1 TGGCCTTCACCGCACACCGCAGGAGGTGGCGATGGCTGC 59 7 1 CAACAGCCAAGATACAACAGCGCCGGGGGTGGGATTCGAACC 63 96 0 GTTTCCGCCTCAGGCTGAGGCGGTGGAGAAGGTCTTTTCCGG 83 55 0 AAAGAAAAAGGAGTACTACGAGGGGGAGGAGG 90 0 0 GAAGGGATACCAGCCGTCGGACGAGCTGAAGGAGGAGCTGAG 97 261 1 * * ** ** ** ** MAP Score: 25.7488 Motif 7 CGCGTTGCACCCGGCGGGGAGGAGGCCGTTTCA 7 42 1 GCCGTTTCATCCGGAGCGGGTGACCTCATCCTT 7 66 1 CCCCTGAGAAGGGGCGGAGGAGGAACAGAAACG 7 130 0 GTCCCCCCACCCGCTGTGGCGGAAGGCCCCTGA 7 156 0 ACAGTGGGAGCGGCGGTGGGCGGCTGACCGAAA 7 197 0 ACAGAACTAAATGCGGGGGGAGGGATTCGAACC 19 131 1 TTCATCTGAGCGGGGGTTGCCGAGCGGACAAAG 19 201 0 ACCGAATTCAGTGCGGGGGGAGGGATTCGAACC 23 55 1 AGGCCCTGAGCGGGGGTTGCCGAGCGGACAAAG 23 125 0 CGTCGCCCCCGTGGGGTAGCGGATATCCTGAGG 27 53 1 CGGATATCCTGAGGGGCTGCGGACTCCTCGACC 27 72 1 CAGTCTGATGGAGGAGCTGCTGGAAGGCTGGAA 28 92 1 ATTGAAAGGCCGGGAGTTGGGGATCTGGCTAGG 35 122 1 TCGTTTAAACGAGGTGTGGCTGATATGTAGAGT 53 71 1 ATCGAATCGCCAGCAGTCGATGAGGAGCTGATT 57 136 1 TCACCGCACACCGCAGGAGGTGGCGATGGCTGC 59 16 1 AATTTCCGAAATGGGGGTGCCGGGAATAAACAC 59 233 0 AGGCGTTAGGCCGGGGTTGCCGAGCGGTAAGGC 63 27 1 AGATACAACAGCGCCGGGGGTGGGATTCGAACC 63 96 0 TGTTGAGATTATGGGGTAGCTGAAATTTTGGTT 64 46 1 CAGTTCAATGATGGGGCCGCCGAGATTTGAACT 78 84 1 AATCATTACAGAGGGGCCGTAGGGTAGCCTGGT 78 148 0 TCAGGCTGAGGCGGTGGAGAAGGTCTTTTCCGG 83 55 0 GGAGTACTACGAGGGGGAGGAGG 90 0 0 GGACGAGCTGAAGGAGGAGCTGAGAGAGCAT 97 279 1 TGAAAATTATCCGAGGGAGCCGAAGGTTTGGGA 98 26 1 * ***** ** ** MAP Score: 22.2855 Motif 8 CTTACGCGTTGCACCCGGCGGGGAGGAGGCCGT 7 38 1 GCCTTCCGCCACAGCGGGTGGGGGGACTTTCCT 7 162 1 GTTCGATGAAGCTGCTTGAAGGAATT 12 126 1 GCGACAATACGCCGCCGGCAGGATTCGAACCTG 13 34 1 AGAACTAAATGCGGGGGGAGGGATTCGAACCCT 19 133 1 CAACGGTAAAGCTGTCGGAAGGGTGAGTGAAGC 20 43 1 CCACGCAGAGACCGCATGCGGTGCAAGCTTCAC 20 69 0 CGAATTCAGTGCGGGGGGAGGGATTCGAACCCT 23 57 1 CCCGGGTTCAACTCCCGGCGGGGGCATGGAATT 27 103 1 TGATGGAGGAGCTGCTGGAAGGCTGGAAGAAAT 28 97 1 AATTATTAATACTGCATGGAGGGATTGTATTGA 34 68 1 TTGCAGGAGGTGGTATTTTGGAGGC 52 2 1 ACACCAAAGAGCACCTTGAAGGGGTGAAAAAGG 57 179 1 TTCACCGCACACCGCAGGAGGTGGCGATGGCTG 59 15 1 ATACAACAGCGCCGGGGGTGGGATTCGAACCCA 63 94 0 GTTTGGGTCGACTGCAAGCGGGATCTGCATTGT 97 27 1 ** ** ** **** MAP Score: 14.6598 Motif 9 GAAACGGCCTCCTCCCCGCCGGGTGCAACGC 7 43 0 CATCGCATTTCCCCGCACCGGTCTCGTTTCT 7 106 1 CGTTTCTGTTCCTCCTCCGCCCCTTCTCAGG 7 130 1 GAGGAAAGTCCCCCCACCCGCTGTGGCGGAA 7 165 0 TTTCGGTCAGCCGCCCACCGCCGCTCCCACT 7 197 1 CGGCGACAATACGCCGCCGGCAGGATTCGAA 13 32 1 GGTTCGAATCCCTCCCCCCGCATTTAGTTCT 19 133 0 GGATTCGAACCCTCGAACCCCTACGGGACAG 19 153 1 TTTGTCCGCTCGGCAACCCCCGCTCAGATGA 19 202 1 GGTTCGAATCCCTCCCCCCGCACTGAATTCG 23 57 0 GGATTCGAACCCTCGAACCCCTACGGGACGG 23 77 1 TCCAATTTTTCCACGTCGCCCCCGTGGGGTA 27 40 1 GCTGCGGACTCCTCGACCCGGGTTCAACTCC 27 87 1 AAATTCCATGCCCCCGCCGGGAGTTGAACCC 27 106 0 ATGTGAATTACCTCAGCCCCCAGATCAGCCA 35 93 0 CTAGCCAGATCCCCAACTCCCGGCCTTTCAA 35 123 0 GCCATCCTCCTCGCCTTGAACAGTGC 39 74 0 TGGCCTTCACCGCACACCGCAGGAGGTGGC 59 9 1 ATAAACACTTCATCAACCCCCATCTTTTTCA 59 210 0 GTGTTTATTCCCGGCACCCCCATTTCGGAAA 59 233 1 CCTTACCGCTCGGCAACCCCGGCCTAACGCC 63 28 0 TGGGTTCGAATCCCACCCCCGGCGCTGTTGT 63 94 1 CTATTATTTTTCTCCTCGCCCAAAAAGAGAA 71 72 1 GAAAAGACCTTCTCCACCGCCTCAGCCTGAG 83 58 1 CCTCCTCCCCCTCGTAGTACT 90 0 1 ***** ***** MAP Score: 13.6577 Motif 10 CTTACGCGTTGCACCCGGCGGGGAGGAGGCCGTTTCATC 7 38 1 TGATGGAGGAGCTGCTGGAAGGCTGGAAGAAATGGGCAG 28 97 1 CAACGGTAAAGCTGTCGGAAGGGTGAGTGAAGCTTGCAC 20 43 1 TCAAAACCAAGCTGCCAGAAAAGAGGAAGAAAGA 59 276 1 AGGGATACCAGCCGTCGGACGAGCTGAAGGAGGAGCTGA 97 263 1 GCGGTGGGCGGCTGACCGAAAGGAGGAAAGTCCCCCCAC 7 179 0 GGCCCTGAGCGGGGGTTGCCGAGCGGACAAAGGCGCGGG 23 118 0 TCATCTGAGCGGGGGTTGCCGAGCGGACAAAGGCGCAGG 19 194 0 GCGAACTCTCGCAGGGAGACGAGCGGTATCGACACTCCC 22 83 1 CAACTCCCCTGCGGAGTGCCAGGCTGTCGAGCAGAGAGG 57 214 0 TCGAGAATGAGCAGGTTGTTGAAGGGCTGGAAGGCCAAA 35 13 0 AGCTTCTTCTGCTGAAAGAAGGGTGATAAAAAACACCAG 57 23 0 AACTCTGCTGGCTGATCTGGGGGCTGAGGTAATTCACAT 35 85 1 AAAAGAAAAAGGAGTACTACGAGGGGGAGGAGG 90 4 0 CGAAGGTTTGGGAGAAGATTGAGAGGAAGGCGTATGTGG 98 46 1 GGTGATTAAGGGAGTTAGAGGGGAGATTAGGATTAAGCT 97 183 1 ACACCAAAGAGCACCTTGAAGGGGTGAAAAAGGACCCTC 57 179 1 AGTGTATCTTTCTGTCATGAGGGAGGCAGGATTTAAATA 78 241 0 AAAACCGAATTCAGTGCGGGGGGAGGGATTCGAACCCTC 23 52 1 AGAGCGTCCGGCTGTTAACCGGACGGTCGCAGGTTCGAA 13 57 0 TGTGGCGGAAGGCCCCTGAGAAGGGGCGGAGGAGGAACA 7 136 0 TTACAGAGGGGCCGTAGGGTAGCCTGGTGATCCTCTCGG 78 137 0 AGTTGAAATTGCCGACGGGAAAGTTAAGGATATTCGCAA 6 18 0 ** * * *** ** * MAP Score: 12.6477 Motif 11 ACCACCATTTGTTCAGAAAAAATATCCTGATAAATAATTAATTA 2 58 0 CTGAACTGGTATATACTGAAGGAGAGCGGAGAAACGCTAAGGGT 6 60 0 CGCGTAAGCGGCTCAGTCTAATGCCGCCGGAACAGA 7 2 0 GAGGAGGAACAGAAACGAGACCGGTGCGGGGAAATGCGATGATT 7 103 0 GGGAAGCGTATTTAAGACAATAGTTGCAGATAAAACGATTGATT 9 65 0 AAATGAGCACGATTTGTTTATTTATGATGATAAAGTATTTATGA 10 54 1 TTTTCATCTGAGCGGGGGTTGCCGAGCGGACAAAGGCGCAGGAT 19 192 0 GGAAGGACAATTCCTGCAGGAAATTGTTGCATAA 22 0 1 TAATCTACAGGCTAAGCGAACTCTCGCAGGGAGACGAGCGGTAT 22 68 1 ATAGGCCCTGAGCGGGGGTTGCCGAGCGGACAAAGGCGCGGGAT 23 116 0 GCTGCTGGAAGGCTGGAAGAAATGGGCAGGAAAATTGATGTTTT 28 107 1 CGTAAAAAGCGAAAAGTTTTAAAAGGCTGAAAAAATAGTTAAAG 38 156 1 ATTGGGGGCAGCAGCGGTCATTGCAGCTGGAGAAATATACTGGG 43 12 0 CTCCGGGCAGGGAAAAATGTACTGGAAAATAC 47 3 0 ACAACTCCCGGATACCTCGACGGTAGCAGAGAAAGTTCTGGACT 51 10 1 GAAAGTTTATTTTCAGTTATAATCTGCTGAAAAACAAAAAAGTT 56 31 0 TCTGCTCCTCGCAATGCCCACAGCGGCGGGTAAAACCCT 83 5 0 TGGGCATTGCGAGGAGCAGATTTTTGCCGGAAAAGACCTTCTCC 83 29 1 GTTGAGAAGTTGATGGTGGCATATAAAAAATTTTTTT 84 3 1 GAAAGGTGTAGCACAGCGCGGATAAAATATTTT 95 7 0 AAGGTAAGCCGGAACGTAAACGATTCCGGAAAAATGAATGGATT 96 28 1 TGCGGTTTTTGATTGGTTTATTTCGGCTGGAGAAGGATTACTGG 97 100 1 * * * ** ** *** MAP Score: 10.4408 Motif 12 CCGCCGGCAGGATTCGAACCTGCGACCGTC 13 45 1 CGGGGGGAGGGATTCGAACCCTCGAACCCC 19 144 1 CGGGGGGAGGGATTCGAACCCTCGAACCCC 23 68 1 CCCCCGCCGGGAGTTGAACCCGGGTCGAGG 27 97 0 CTGATATGTAGAGTCGAACCACATTGTATA 53 90 1 CCGGGGGTGGGATTCGAACCCACGCGGGCG 63 86 0 CTCCGCTGATCCGAACCTGCCGATGCA 96 153 0 ********** MAP Score: 10.0033 Motif 13 ACGCCAACAGCAAACTGGAGAATCTGCAGAGCATCGTAGGATG 6 180 1 TTCTCAGGGGCCTTCCGCCACAGCGGGTGGGGGGACTTTCCTC 7 153 1 TCGGAGAAACATTACAGTGGGAGCGGCGGTGGGCGGCTGACCG 7 200 0 CTTTAATGGTCGTTCTGGACTATTGGCAGAGCAAACTTAAATT 14 65 1 CCAAACTCAACGAACAGAACTAAATGCGGGGGGAGGGATTCGA 19 118 1 AGAATTTTTCATCTGAGCGGGGGTTGCCGAGCGGACAAAGGCG 19 198 0 AAACTCCTCCAAAACCGAATTCAGTGCGGGGGGAGGGATTCGA 23 42 1 AATCAATAGGCCCTGAGCGGGGGTTGCCGAGCGGACAAAGGCG 23 122 0 TGATGAGCTACAGTCTGATGGAGGAGCTGCTGGAAGGCTGGAA 28 82 1 CGGAACTCTGCTGGCTGATCTGGGGGCTGAGGTAATTCACATT 35 82 1 CGGATTGGGGGCAGCAGCGGTCATTGCAGCTGGAGAAATATAC 43 16 0 GAAGCTATCTCACACTGGGAACAAGGCTGAGAGACTTTCCCGA 57 56 1 GCCTTCACCGCACACCGCAGGAGGTGGCGATGGCTGCAGTGGA 59 12 1 GGCTGCAGTGGATGAAGACGTGGATGTTGTGGGCATAAGTCTT 59 43 1 TGGAGTTATTCCGACAGACGATATTGTCGAGCTGAAAAAGATG 59 178 1 GGCTATGAGGCGTTAGGCCGGGGTTGCCGAGCGGTAAGGCGCA 63 20 1 CCTGGTGATCCTCTCGGCTTTGGGAGCCGGTGACCCGAGTTCA 78 111 0 AAATCTGCTCCTCGCAATGCCCACAGCGGCGGGTAAAACCCT 83 9 0 AGCCGTCGGACGAGCTGAAGGAGGAGCTGAGAGAGCAT 97 272 1 * * * * ** * *** MAP Score: 8.89501 Motif 14 TAAAAAACGGTTTTCCCGCCAGTTCAATGA 78 65 1 TTATCGGAGGTTTTCCCGACCTCTGGCAAA 43 116 0 AATCATCGCATTTCCCCGCACCGGTCTCGT 7 103 1 AAACTATTTTTTTTCCCGAAACTTTTAAAT 9 257 1 CCTCAAAATTTTTTCCCACCTGACTATATA 44 76 0 GGAGAAGGTCTTTTCCGGCAAAAATCTGCT 83 43 0 AAAACATCAATTTTCCTGCCCATTTCTTCC 28 121 0 ATTTAAACCTTTTTCCCAACTTTGCAATCT 54 38 1 AGGGTTTTACCCGCCGCTGTGGGCA 83 5 1 CTCATAGCCTTTTCTCCGCAAATTATATAA 28 18 1 CACTGTAATGTTTCTCCGACGACTATTAAA 7 224 1 ATTGGCAAACTTTTTCCGAAATCTTTTTAA 36 197 1 TCTCTAAAATTTTTTCCGAATATCGAACCT 91 22 1 ATCCATTCATTTTTCCGGAATCGTTTACGT 96 41 0 CCAGTACATTTTTCCCTGCCCGGAG 47 17 1 TAATTTTTATTTTTTCCAACAGATAGTTAA 50 13 1 AACTTAAAAATTTTCCGACAGAGTCACGAT 74 32 0 ATCAGGATATTTTTTCTGAACAAATGGTGG 2 71 1 ********** MAP Score: 7.94214 Motif 15 CGCGTTGCACCCGGCGGGGAGGAGGCCGTTTC 7 42 1 CCCACCCGCTGTGGCGGAAGGCCCCTGAGAAG 7 152 0 TTCCGCCACAGCGGGTGGGGGGACTTTCCTCC 7 165 1 AGTGGGAGCGGCGGTGGGCGGCTGACCGAAAG 7 196 0 AGAACTAAATGCGGGGGGAGGGATTCGAACCC 19 133 1 TTTCATCTGAGCGGGGGTTGCCGAGCGGACAA 19 203 0 GGTTAACTGTCCGGTGGAGACGATAGAGGTTA 20 100 1 TGCGCTTACTGCGGGGCCTGCGTTGCCGTCTG 20 224 1 CGAATTCAGTGCGGGGGGAGGGATTCGAACCC 23 57 1 TAGGCCCTGAGCGGGGGTTGCCGAGCGGACAA 23 127 0 CGGATATCCTGAGGGGCTGCGGACTCCTCGAC 27 72 1 GGTTCAACTCCCGGCGGGGGCATGGAATTTTT 27 107 1 GCTGGCTGATCTGGGGGCTGAGGTAATTCACA 35 91 1 CATTGAAAGGCCGGGAGTTGGGGATCTGGCTA 35 121 1 TGTTCAAGGCGAGGAGGATGGC 39 78 1 ATGCTCAAAAGAGGCAGAGGCGGCAATGGTTA 46 18 1 CCTGCGGTGTGCGGTGAAGGCCA 59 1 0 CCGCACACCGCAGGAGGTGGCGATGGCTGCAG 59 19 1 GAGGCGTTAGGCCGGGGTTGCCGAGCGGTAAG 63 26 1 TCGAACCCACGCGGGCGAACGCCCACACGCTC 63 71 0 TACAACAGCGCCGGGGGTGGGATTCGAACCCA 63 94 0 CCAGTTCAATGATGGGGCCGCCGAGATTTGAA 78 83 1 GCCTCAGGCTGAGGCGGTGGAGAAGGTCTTTT 83 59 0 GGAGTACTACGAGGGGGAGGAGG 90 1 0 ******* *** MAP Score: 6.09432 Motif 16 CATTTTATAAAATTTTTTTTAATTAACTTTTT 2 21 1 AGCATAATTCAATTTTTTAAGATGATAATGAA 11 23 1 GAGCAAACTTAAATTTTTTGGATATATAGGCT 14 93 1 TTCACCTTTCAAATTTTTAAAAATAGGAAATT 15 13 1 GGACTATATAAATTTTTTTGCATTTAGGTATT 25 51 1 ACGCTTTCGCAAGTTTTTTAAAATAGATTTTA 26 109 1 TCAATATAGTAAATTTTTTTAAAATTAAAAAT 28 194 1 TAGAAGAGAAAAGTTTTTAAAAAATACTTATC 29 93 1 TTTATTGGCAAACTTTTTCCGAAATCTTTTTA 36 194 1 TTTAGTGAATTACTTTTTTGGATTATATTTTC 38 66 1 GCACTTTAGAAACTTTTTTAAATTATAATTCT 64 101 1 GTAGAAAATTTTTTGAACTCCTTTGCC 67 5 1 GTAGTTTAGGAAATTTTTTAAAATTAAAGATA 70 71 1 CATTCTCTAAAATTTTTTCCGAATATCGAACC 91 19 1 ** ****** ** MAP Score: 3.75243 Motif 17 GAAACTATTTTTTTTCCCGAAACTTTTAAATA 9 256 1 CCATTAAAGATTTTGCAGCAAACTATGCAACA 14 42 0 ATTAAAACACTTTTGCGCAAATTTGCTCACAA 16 86 0 AAATGAAAATTTTTGCGAAAATTAAAACACTT 16 106 0 ACTATATAAATTTTTTTGCATTTAGGTATTTA 25 53 1 ATTGGCAAACTTTTTCCGAAATCTTTTTAAAC 36 197 1 GCTACCACCTTTTTTCTGTATTTAACATTCTT 36 238 0 ATTTTTCAGATTTTGCGAAAATATAATCCAAA 38 82 0 TTATCCCATATTTTGCGATAAATCCTACGAAA 40 14 1 TATATTACTATTTTGCTGTAATTTTTAAT 48 7 0 AGTTTTTCACCAATCAATCAAGTT 56 119 0 TTCCCGAAGCTTTTGCAGAAATTGAGAGCCCA 57 92 1 TCATATGTCATTGTTCTGAAAACTTAAAACTT 58 196 1 TTATGCTTGCTTTTTTGGAAATTCCACAGAAG 63 156 0 ATAGTAATTATTTATCGGGAAATTC 63 242 1 CCACCCCCATTTTTGCCGTATTAATTTTTAGA 64 130 0 TTTTCATACATTTTTCTAAAAAAAAATTAAA 68 9 0 TTTTAAAGCCTTTTGCTGCAAACGCATTCGTT 78 193 1 AACGCATTCGTTTTTCAGGATGGTGAAGTATT 78 213 1 AGGAGCAGATTTTTGCCGGAAAAGACCTTCTC 83 40 1 TTCTCTAAAATTTTTTCCGAATATCGAACCTA 91 21 1 AATCCATTCATTTTTCCGGAATCGTTTACGTT 96 40 0 ****** * *** MAP Score: 2.8857 Motif 18 TGCTTAAGAGGGGATTCGCG 1 63 1 AGAAACGCTAAGGGTTGGAGTTGAAATTGC 6 45 0 ACATTACAGTGGGAGCGGCGGTGGGCGGCT 7 205 0 TGGGAGACTGGGGATTTGAAATTAGCGGAC 12 51 0 TGCGGGGGGAGGGATTCGAACCCTCGAACC 19 142 1 CTGTCCCGTAGGGGTTCGAGGGTTCGAATC 19 154 0 TCATCTGAGCGGGGGTTGCCGAGCGGACAA 19 203 0 AACTCTCGCAGGGAGACGAGCGGTATCGAC 22 86 1 TGCGGGGGGAGGGATTCGAACCCTCGAACC 23 66 1 CCGTCCCGTAGGGGTTCGAGGGTTCGAATC 23 78 0 TGCCCCCGCCGGGAGTTGAACCCGGGTCGA 27 99 0 TGGCTGATCTGGGGGCTGAGGTAATTCACA 35 93 1 TCGTCGGATTGGGGGCAGCAGCGGTCATTG 43 33 0 TCATCCCGGAGGAAGTCGAGTACACCGAAC 51 197 1 TGAAAAAGATGGGGGTTGATGAAGTGTTTA 59 210 1 CGCCGGGGGTGGGATTCGAACCCACGCGGG 63 88 0 CGGCAAAAATGGGGGTGGAATT 64 144 1 AAGTGGTGAAGGTGGAGGAGCTTGCTGAAA 83 149 0 AGTACTACGAGGGGGAGGAGG 90 1 0 AATTATCCGAGGGAGCCGAAGGTTTGGGAG 98 30 1 ********** MAP Score: 0.909678