AlignACE 3.0 10/20/99 AlignACE2 -i AG/AG_operons003_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944241912 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 AF0003 300 A. fulgidus predicted coding region AF0003 #1 AF0004 266 RNase L inhibitor #2 AF0005 38 A. fulgidus predicted coding region AF0005 #3 AF0006 104 corrinoid methyltransferase protein (mtaC-1) #4 AF0008 73 oxalate/formate antiporter (oxlT-1) #5 AF0014 95 A. fulgidus predicted coding region AF0014 #6 AF0016 54 A. fulgidus predicted coding region AF0016 #7 AF0018 22 3-ketoacyl-CoA thiolase (acaB-1) #8 AF0021 38 signal-transducing histidine kinase #9 AF0208 112 signal-transducing histidine kinase #10 AF0274 300 sarcosine oxidase, subunit beta (soxB) #11 AF0275 266 surface layer protein B (slgB-1) #12 AF0276 53 conserved hypothetical protein #13 AF0277 75 signal-transducing histidine kinase, putative #14 AF0409 74 aspartate aminotransferase (aspB-4) #15 AF0410 56 signal-transducing histidine kinase, putative #16 AF0448 104 signal-transducing histidine kinase, putative #17 AF0770 300 signal-transducing histidine kinase #18 AF1034 89 methyl-accepting chemotaxis protein (tlpC-1) #19 AF1045 86 methyl-accepting chemotaxis protein (tlpC-2) #20 AF1049 102 type II secretion system protein (gspE-4) #21 AF1052 32 A. fulgidus predicted coding region AF1052 #22 AF1053 34 A. fulgidus predicted coding region AF1053 #23 AF1055 111 flagellin (flaB1-2) #24 AF1057 39 cytochrome C-type biogenesis protein (ccdA) #25 AF1058 293 A. fulgidus predicted coding region AF1058 #26 AF1064 51 ABC transporter, ATP-binding protein, putative #27 AF1173 180 A. fulgidus predicted coding region AF1173 #28 AF1174 61 A. fulgidus predicted coding region AF1174 #29 AF1177 103 3-hydroxyacyl-CoA dehydrogenase (hbd-6) #30 AF1178 195 A. fulgidus predicted coding region AF1178 #31 AF1179 62 conserved hypothetical protein #32 AF1181 35 GTP-binding protein #33 AF1184 37 signal-transducing histidine kinase #34 AF1259 36 inosine monophosphate dehydrogenase, putative #35 AF1260 207 phosphoribosylformylglycinamidine synthase I (purQ) #36 AF1261 133 medium-chain acyl-CoA ligase (alkK-4) #37 AF1263 74 iron-sulfur cluster binding protein #38 AF1384 189 response regulator #39 AF1446 63 A. fulgidus predicted coding region AF1446 #40 AF1448 114 transcriptional regulatory protein, AsnC family #41 AF1449 33 pyruvate formate-lyase 2 (pflD) #42 AF1451 88 thermosome, subunit beta (thsB) #43 AF1452 117 signal-transducing histidine kinase #44 AF1473 98 response regulator #45 AF1475 109 mitochondrial benzodiazepine receptor/sensory transduction protein #46 AF1484 87 A. fulgidus predicted coding region AF1484 #47 AF1515 199 signal-transducing histidine kinase #48 AF1621 78 conserved hypothetical protein #49 AF1638 31 ribulose bisphosphate carboxylase, large subunit (rbcL-2) #50 AF1639 30 signal-transducing histidine kinase #51 AF1721 182 signal-transducing histidine kinase #52 AF1766 74 amino-acid ABC transporter, periplasmic binding protein/protein kinase #53 AF1898 74 response regulator #54 AF2032 185 signal-transducing histidine kinase, putative #55 AF2249 66 response regulator #56 AF2251 30 competence-damage protein, putative #57 AF2252 78 argininosuccinate synthetase (argG) #58 AF2420 40 signal-transducing histidine kinase, putative #59 AF2421 58 leucyl-tRNA synthetase (leuS) #60 AF2425 85 methanol dehydrogenase regulatory protein (moxR) Motif 1 ATCAGAAAATCTTATAAGGATTGTCAA 2 5 1 TTAATTAAAAAAAATTTTATAAAATGATTTGT 5 15 0 AAAGTACTCAAAAAATTTAAAAAATT 50 4 0 AAGTTATTTTAAAAATTTAAAAATA 56 3 0 TATCACCTCTAAAAAATTAAAAATTTGGGGGA 22 10 0 TTGTAATCTCAAAAGATTAAAATACTCTTCAA 28 25 1 CCGACACGGAAAAAGCTTAAAAGATTGCGGTT 35 173 1 TGAGATTAAACAAAAGTTAAAAAACTTCCTGG 57 23 0 GAGCTAATATCAAACATTAAAATA 13 61 1 GTAACCAAAACAAAAATTAAAAA 43 1 0 ATTATTAACCAAAAAATTTAAATAGGAGCTAA 13 36 1 TGGGCGAACCAAAACTTTTTAAAGCGCATGCT 51 101 0 GTTTAATCTCAAAAGATTTAAACCTCTCCGCA 57 44 1 ATAATTATGGAAAAGCTTAAATGGTTTGAATT 27 32 0 CAAACAAGAGAAAAGTTTAAATCCAGCTTTTG 54 63 0 AAGAGATAGTAAAATTTTTAAATGTTGAGGAT 38 155 1 TTCGTGATAGAAAAGCTTATATAGAAATACCA 42 32 1 ACTCCCAAAACAAATTTTATATATGTTGGTAC 48 42 1 GGCCAAACGCCAAATTTTTTAATCCCATTTAT 59 24 1 AACTGAACAGCAAAGTTTATATTCATCGTCCA 15 19 1 CCCAAACGCCCAAACCTTAAATACCAAACCGC 1 231 1 TCAATGTTTCAAAAAATTTTATGAACTCCCTT 25 24 0 CCCCAAGGTAAAAAAGTTTTATTGGTTTATAC 9 22 1 AATCACACGAAAAATATTTAATTTTGAATGGG 44 41 1 GTGACCTCACAAAATCTTTTATTTTCAAATAG 46 53 1 AAAACCTCGCCAAATCTTTTATACTTTAAATT 45 76 1 GATTGTGGTGCAAAATTTAAGAAGTTTTCC 8 8 0 TTCTTTTCAAAAAAATTTATGTCTTTGTATAA 9 48 0 GTAAAAAATTTTTGACAATCCTTAT 2 23 0 TCAAAAATAAAAAACTTTTTGA 58 0 0 GTCAGGTGGGAAAAAATTTTGAGGTGGGCATA 27 82 1 AAAATGAAAGCAAAGGTTAATAGCAACATCAG 20 40 1 AATTAACAACAAAAAGTTAATTAAAAAAAATT 5 31 0 CTTTATAGAGAAAATTTTATTTTTTATTTTCG 19 43 1 ATCCCAAATAAAAAGCTTTATAAAAACAAACA 47 161 1 CAAAAGTTATTTTTCCCTCCAA 26 39 0 CAAAAGTTTTTAGCTTGCCGTC 34 0 1 AAACTGCAAGAAAAGATTTTTTAACTTGTAAA 55 30 1 **** ****** MAP Score: 39.5846 Motif 2 TATACATTTCTTTTTCAATTTTTATGCTTGA 24 17 1 CAAATCACCCTTTTTAAATTTCCAGCACTCT 25 271 0 AATTTTTTAAATTTTTTGAGTACT 50 3 1 TATTTTTAAATTTTTAAAATAAC 56 2 1 AAGTTTTTTATTTTTGAATTTCCCTAATTGT 58 15 1 AGGAAAAAGATTTTCTAATTTTTTTATGAAT 0 272 1 AGAAGGCCTATTTTCTAATTTGGAGGTGTTT 3 81 1 CCCAGGAAGTTTTTTAACTTTTGTTTAATCT 57 22 1 TTTTTAACTTTTCTTTGTCAA 6 0 1 GCAGCAATTGTTTTTTACTTTTCCTCTTTTT 1 20 0 AGGTTTTTCTTTTTTTACTTTTCCCTAGACA 35 39 1 CAAGAAAAGATTTTTTAACTTGTAAATTACA 55 36 1 GAAAATTTTATTTTTTATTTTCGCAATCTAC 19 52 1 TCCCCCAAATTTTTAATTTTTTAGAGGTGA 22 9 1 TGTTGTCGAATTTTTGATTTTACGGGAAAAG 31 12 0 TTTTTAATTTTTGTTTTGGTT 43 0 1 TATTTTCTACTTTGATGCGTCAG 54 172 0 TTTTCCCTATTTTTTAAAGTTGGACT 12 37 1 CGTAAGTTCATTTTCCAACTTTTTTGTTTTT 36 15 1 CGATTTCCGGTTTTCAAACTTATAAAAGCGG 47 39 0 GAGGGTAACTTGTTTAAATTTATCCTAAAAA 16 67 0 AATGACTAAGTTTTTAAATTGCCAAGTCTAA 53 34 1 TTATAAAATTTTTTTTAATTAACTTTTTGTT 5 25 1 AATCGTAATCTTTTTTAATTAGGTTTTTAAG 41 11 1 GAAATTACCTTTTTCTAAGTTGAAATTTCCT 23 20 0 GATAGTAAAATTTTTAAATGTTGAGGATAAA 38 159 1 CCAATAAAACTTTTTTACCTTGGGGCGAGGA 9 16 0 AAAAGAATTCTTTTCAAATTGATGCCGTTAC 35 111 1 ACATAATAATTTTTCGAATTAATTTACTTAA 36 82 0 ***** ***** MAP Score: 39.0702 Motif 3 GAAATCAGACCAAAATGGGATTGAAAGGCAGACGAC 0 66 1 GAAATCAGACCAAAATGGGATTGAAAGTAAGAACAT 0 134 1 GAAATCAGACCAAAATGGGATTGAAAGGCAATGGCG 0 207 1 GTGTTCAGAAAAAAGAGGAAAAGTAAAAAACAATTG 1 11 1 TAATTAACAACAAAAAGTTAATTAAAAAAAATTTTA 5 28 0 TTGATGTGGAAAAAAGTGCAATTGAAGCCCTTGAGA 17 24 1 AGCAGGGGAGCAGAGTGGCAAGGTAACTGAGGTAAA 17 168 1 AGTGTAATCCCAAAAATGAAAGCAAAGGTTAATAGC 20 28 1 TTCAACTTAGAAAAAGGTAATTTCAACATATAAGAA 23 27 1 CTCAAGCATAAAAATTGAAAAAGAAATGTATATTT 24 14 0 AACATCAACACAAAAGTTAACGGTAAAATAATAACA 27 126 1 CGCTGATTCCCAAAGCTGAAATTAAAGAGGTAAGGA 38 54 1 ATCCCAAATAAAAAGCTTTATAAAAACAAACAGTCG 47 161 1 GAAAAGAAGTAAAAGCTGTACTACAATGAACTCTTT 51 34 1 TGCCTCGCCACAAAAAGGTATCGGAATGACTAAGTT 53 10 1 CAGCCATTTCAAAAGCTGGATTTAAACTTTTCTCTT 54 54 1 GGAGTAATTTCAAAACTGCAAGAAAAGATTTTTTAA 55 18 1 ***** ** * ** MAP Score: 18.7593 Motif 4 TTTTACTATTTTTCAAAAGCAGGGAATTAT 11 34 1 TTAACAGCCATTTCAAAAGCTGGATTTAAA 54 50 1 ATATAGCTCTTCTCAAAAGAATTTCTCGGT 18 63 1 TTTTGTTTAATCTCAAAAGATTTAAACCTC 57 40 1 AACATTGTAATCTCAAAAGATTAAAATACT 28 21 1 TTTAGTCTGATTTCAAAAAACGCCGGCAAA 1 61 0 TGCCAATTCTTTTCAAAAAAATTTATGTCT 9 56 0 CAATTCAATGTTTCAAAAAATTTTATGAAC 25 30 0 GGGGGAATATGCTCAAAAGAGGCAGAGGCG 29 10 1 AACTGATTAATTACAAAAGCACATTCCTAA 11 70 0 GCAAGCTAAGTTTTAAAAACTACTTACCTT 51 153 1 TTTCAATCGAGCTTAAAAGCCACTTTGCTT 45 11 0 TACGAGTGCTTTTTAAAAAAGAAAAATCGC 45 41 0 GAGTTTATACTTTTAAAAAAAGGCGTTTTT 47 104 1 GATTTTTCCCTCTTAAAAACTTTCACCAGT 39 19 0 CACGGAAAAAGCTTAAAAGATTGCGGTTGA 35 177 1 ACGGCATCAATTTGAAAAGAATTCTTTTAG 35 109 0 GTTTTCAAACTTATAAAAGCGGAAAAAGGC 47 31 0 AGTAACGAACTTATAAAAGCGTTTGGTGAG 52 45 0 GGTAAAATTGGTTCAAAAAAATTAAGCCTT 30 173 0 ATAAAAAGCTTTATAAAAACAAACAGTCGA 47 168 1 TAAATTTAAAGTATAAAAGATTTGGCGAGG 45 80 0 TCTAACTCCTTTAGAAAAGAAGTAAAAGCT 51 21 1 AATCTACATTCATAAAAAAATTAGAAAAT 0 281 0 GTTATAATCTGCTGAAAAACAAAAAAGTTG 36 30 0 CACCATTTGTTCAGAAAAAATATCCTGATA 5 70 0 GGTGTTCAGAAAAAAGAGGAAAAGT 1 5 1 ********** MAP Score: 17.6377 Motif 5 AAATCAGACCAAAATGGGATTGAAAGGCAGACGAC 0 67 1 AAATCAGACCAAAATGGGATTGAAAGTAAGAACAT 0 135 1 AAATCAGACCAAAATGGGATTGAAAGGCAATGGCG 0 208 1 CTGATTTCAAAAAACGCCGGCAAAAACGATTATCG 1 50 0 TTAACAACAAAAAGTTAATTAAAAAAAATTTTATA 5 26 0 TTAATAACGATAATTGACAAAGAAAAGTTAAAAA 6 9 0 TTAATCAGTTAAATTGGAGGTGAAAGTTTGGGAAA 11 90 1 TAACTTGTTTAAATTTATCCTAAAAAAATATCAAC 16 58 0 TAAACAACGAAAATTGATGTGGAAAAAAGTGCAAT 17 11 1 AGTGGCAAGGTAACTGAGGTAAAAACTGGAGATGC 17 181 1 TCAAGCATAAAAATTGAAAAAGAAATGTATATTTA 24 13 0 GAAAATTGTATAACTTGGAGGGAAAAATAACTTTT 26 25 1 GCGGTAAAATTGGTTCAAAAAAATTAAGCCT 30 174 0 TTTTCAGTTATAATCTGCTGAAAAACAAAAAAGTT 36 31 0 GATTCTTAAGTAAATTAATTCGAAAAATTATTATG 36 77 1 TATTGTTATATAATTTGTGGAGAAAAGGCTATGAG 37 41 1 CCTTAAAAACCTAATTAAAAAAGATTACGAT 41 12 0 AAGTGGCTTTTAAGCTCGATTGAAAGCGATTTTTC 45 16 1 TCGAACTAAATTGACAGAAAACTTAAAAGAT 46 6 1 TGAAAACCGGAAATCGCTTAAGAAAACTACTTAAG 47 54 1 GAGTGATGAAAAAGTTCTCTGGAAAAGAGTTCATT 51 58 0 GAGTAATTTCAAAACTGCAAGAAAAGATTTTTTAA 55 19 1 AAGTGGCTAATAAATGGGATTAAAAAATTTGGCGT 59 30 0 *** *** **** MAP Score: 17.0994 Motif 6 ATGAATAAATTTGGTGGTGGATTTGCTGGA 1 178 0 ATTTTCTAATTTGGAGGTGTTTAG 3 90 1 GGAAGGTTGTTTGCAGGTGTGAGGATCTGA 10 45 1 ATCAGTTAAATTGGAGGTGAAAGTTTGGGA 11 93 1 CTCCTTAATCTCACAGGTGTTTTCATGGTC 16 19 1 AAAGAATTTCTCGGTGGTGGT 18 78 1 CAATCTACTTTCGGTGGTGTT 19 75 1 TTTTAATTTTTTAGAGGTGATACC 22 20 1 GGGAAAAAATTTTGAGGTGGGCATAGTGCT 27 89 1 AGAATTCTTTTAGCTGGTGGGGCTGGTCTG 35 92 0 GAGAAAAGGCTATGAGGTGAAAGC 37 60 1 TCCAATTACTTCGAAGGTGGAGCAGA 39 47 1 ATTTCTGCAATAGGAGGTGATGTGAA 42 72 1 CGCAGGATAATCAGAGGTGTGAAG 44 84 1 TCTAAAGGAGTTAGAGGTGGTTTTAA 51 6 0 AAAGCGCATGCTGGTGGTGGGAGTGATGAA 51 83 0 AGTCTAATTTTTACAGGTGTCAGGAA 53 58 1 ********** MAP Score: 16.0471 Motif 7 AAAGTAAGAACATCTCATAAACTTGTGTTGGACTCG 0 157 1 AAACGATTATCGCAGCAATTGTTTTTTACTTTTCCT 1 26 0 CCAGCAAATCCACCACCAAATTTATTCATTAAGCTT 1 179 1 TGAACCAGTTCATAACAGCCTTTATTTAGCACTCAT 4 24 1 TTAAATTTTGCACCACAATCTTTTGTTT 8 20 1 CTGCTTTCAGCCCACCCACTTCTATTTCTGCATAAC 17 132 0 ACCTCATCATCCCCGCAGAGCCTTATCGTGGCATCT 17 210 0 GCACTATGCCCACCTCAAAATTTTTTCCCACCTGAC 27 82 0 TAACCATTGCCGCCTCTGCCTCTTTTGAGCATATTC 29 14 0 TCTGACACCTCACTTTATTTTCTCATAGGTG 32 14 0 GCTTTCACCTCATAGCCTTTTCTCCACAAAT 37 53 0 TTCACATCACCTCCTATTGCAGAAATTG 42 70 0 AAATTTAAAACCTCGCCAAATCTTTTATACTTTAAA 45 70 1 CTTTCGGTGACCTCACAAAATCTTTTATTTTCAAAT 46 47 1 AAAGTATAAACTCCACAGTAGTTTTTTGCTTAAGTA 47 81 0 TTAAAAATTTCTCACCAAACGCTTTTATAAGTTCGT 52 35 1 GCTCTCACAACAGCGTTTTTTTGAAGAACTC 54 5 1 * ** ** ***** MAP Score: 14.4999 Motif 8 GACGGGTTGAAATCAGACCAAAATGGGATT 0 58 1 GAACAGTTGAAATCAGACCAAAATGGGATT 0 126 1 CCCAAGTTGAAATCAGACCAAAATGGGATT 0 199 1 CGTTTTTTGAAATCAGACTAAAGTGGGATT 1 69 1 AATCAGACCTCTCACGAAAA 26 0 1 TAGAGAAAGGAATCAGACCAGCCCCACCAG 35 79 1 CTTTTGGTCAATCAGGCCAAACGCCAAAT 59 9 1 ********** MAP Score: 13.3476 Motif 9 AAATGGGATTGAAAGCGAGACATTA 0 5 1 ATGTCCTGACGGGTTGAAATCAGACCAAAA 0 51 1 GACCAAAATGGGATTGAAAGGCAGACGACG 0 73 1 GACCAAAATGGGATTGAAAGTAAGAACATC 0 141 1 GACCAAAATGGGATTGAAAGGCAATGGCGA 0 214 1 AGTTAAATTGGAGGTGAAAGTTTGGGAAAT 11 96 1 AGAAGTGGGTGGGCTGAAAGCAGAGCAGGG 17 145 1 AAAAGGCTATGAGGTGAAAGC 37 63 1 CTTTTAAGCTCGATTGAAAGCGATTTTTCT 45 22 1 ********** MAP Score: 9.21776 Motif 10 TGGTGGATTTGCTGGAGAAGAGCTTTAGGCGGTT 1 160 0 TTTACCTTGGGGCGAGGAGGAGCG 9 0 0 GCGTAACAACGCAGAGGCAGCCCGTGAATCCGGT 10 237 1 AGCAGTGCAAGCAGAAGCAGAGCGGCAGTTAATC 11 142 0 GGAAAAAAGTGCAATTGAAGCCCTTGAGATGCTT 17 31 1 AAGGCTCTGCGGGGATGATGAGGTAATAAAGCTT 17 222 1 GGCCGTGAGAGCGGCTGCGCTGAGGTATTAC 21 7 1 CCTTCGCGAGGCGGAGGCCGCGGGTTCAAATCCC 25 102 0 CCTCCGCCTCGCGAAGGCGGCGCTCTCCCGCTGA 25 119 1 CGGTATAATTGATGCAGCCGAGCTACTTGGATAC 30 58 1 TGATTATGTTGGCGGAGCAGCGGTAATCACACGA 44 17 1 TTGCTTCCGTGCTGGTGCTGCCCGCTAAAACGAA 54 92 1 ** * ** ***** MAP Score: 9.18672 Motif 11 TTATCACCCTTCCCTGCAGCGAGTATGTAAAG 10 275 0 GCAAGCAGAAGCAGAGCGGCAGTTAATCCTCT 11 138 0 GCTTCTGCTTGCACTGCTGCAAACAGTAAACG 11 158 1 CAAGTTACCCTCCGAGCAGGGATAGGAT 16 86 1 TGGGCTGAAAGCAGAGCAGGGGAGCAGAGTGG 17 154 1 GAGCAGGGGAGCAGAGTGGCAAGGTAACTGAG 17 167 1 CCACGATAAGGCTCTGCGGGGATGATGAGGTA 17 215 1 CCAGCAGCTTGCTCAGCAAGGGAATCAGAAGC 17 252 0 GACTTCTTGGAAGAGCAGCAACCTGTCCAGC 17 279 0 AGGGCTCGTAGCTCAGCGGGAGAGCGCCGCCT 25 133 0 GATTATGTTGGCGGAGCAGCGGTAATCACACG 44 18 1 CAAGGTAATTGCACTGCTGCAAGCTAAGTTTT 51 135 1 ** **** **** MAP Score: 8.46953 Motif 12 TGAATAAATTTGGTGGTGGATTTGCTGGAGAAGAGCT 1 170 0 ACAGGAAGGTTGTTTGCAGGTGTGAGGATCTGACCGA 10 42 1 TTATCACCCTTCCCTGCAGCGAGTATGTAAAGCGGGA 10 270 0 GTGGGTGGGCTGAAAGCAGAGCAGGGGAGCAGAGTGG 17 149 1 CCACGATAAGGCTCTGCGGGGATGATGAGGTAATAAA 17 215 1 GGCCGTGAGAGCGGCTGCGCTGAGGTATTACG 21 5 1 AAGGTTCAAGGGCTCGTAGCTCAGCGGGAGAGCGCCG 25 136 0 AGCACTGGTATCCAAGTAGCTCGGCTGCATCAATTAT 30 62 0 GCTTTTTCCGTGTCGGCAGCGTTGATGTTCTGCACTC 35 152 0 AAAGAGGTAAGGAATGCGGCGCATCTGGCAAAGATAG 38 77 1 GCGTATTTGCTGGCGGCAGTTTTTTGGAATGGATTGC 43 40 1 TTTTTGATTATGTTGGCGGAGCAGCGGTAATCACACG 44 13 1 AAGCGCATGCTGGTGGTGGGAGTGATGAAAAAGTTCT 51 75 0 ** **** * * ** MAP Score: 7.33896 Motif 13 GCCAGTGGGGTGATAAGCGTGAAGGACAGGAAGGTTGTT 10 17 1 GAAGGACAGGAAGGTTGTTTGCAGGTGTGAGGATCTGAC 10 37 1 CGCAGAGGCAGCCCGTGAATCCGGTCCCGCTTTACATAC 10 246 1 GGTAGCTGCGTTTACTGTTTGCAGCAGTGCAAGCAGAAG 11 159 0 AACGTAAATATCAGAAGCTTGAGGTTCTTGC 14 2 0 TAGAAGTGGGTGGGCTGAAAGCAGAGCAGGGGAGCAGAG 17 144 1 GGCCGTGAGAGCGGCTGCGCTGAGGTATT 21 0 1 GCTAATCGCTGGTTTAGTTTGAGGATGAGGTGAGAGGTG 23 77 1 AGCGCCGCCTTCGCGAGGCGGAGGCCGCGGGTTCAAATC 25 104 0 TCCCTCTGAAGTCCCTGAATGAGGAACCGTATAACTCAC 25 210 0 TTGGATACCAGTGCTTGATTGAGGCTCTGGACGATGCCT 30 84 1 GGGATTCAGTTGGCGGGCTGGTTAATAACTG 31 41 0 AACCTAAACTTTCAAAGCTGGCAGATCTTTAATT 35 5 0 CGTTACTAGCACTAAAGAGTGCAGAACATCAACGCTGCC 35 136 1 TTTAAGCTTTTTCCGTGTCGGCAGCGTTGATGTTCTGCA 35 155 0 CGGAAAAAGCTTAAAAGATTGCGGTTGATTGCTTACCG 35 179 1 AAATTAAAGAGGTAAGGAATGCGGCGCATCTGGCAAAGA 38 72 1 ATCTGGCAAAGATAGAGAATCCAGAGGAGTTCAACCTCT 38 99 1 AAACTGACGTTGGAGAGCATGCAGTATGGATAAAGACAG 40 42 0 CCTGTAAAGCGTATTTGCTGGCGGCAGTTTTTTGGAATG 43 32 1 AAGTTTTTGATTATGTTGGCGGAGCAGCGGTAATCAC 44 8 1 TAGTTTTTAAAACTTAGCTTGCAGCAGTGCAATTACCTT 51 136 0 * ** ***** * * MAP Score: 6.3858 Motif 14 TTAGGCGGTTTTAAACTCTCGTCGGTCTGAGTTT 1 136 0 TAAAACCGCCTAAAGCTCTTCTCCAGCAAATCCA 1 157 1 AATTTATTCATTAAGCTTTAACCGTTTAAAAATC 1 197 1 GGTTTGGTATTTAAGGTTTGGGCGTTTGGGGATT 1 227 0 TTTGCAGGTGTGAGGATCTGACCGAGGAGGAGAT 10 54 1 GTAAACCTCTTGAGGCTCTCAAGGTCGTCGTAGC 10 108 0 GATGCCACGATAAGGCTCTGCGGGGATGATGAGG 17 211 1 ATAACAATTATATGGCTTTAAACGTACTATTAGC 27 156 1 GCGGCAATGGTTAGGTTCTGATGGGGACATACAT 29 37 1 AGTGCTTGATTGAGGCTCTGGACGATGCCTTCAA 30 93 1 CCGCAATCTTTTAAGCTTTTTCCGTGTCGGCAGC 35 169 0 TCTTTTTTAATTAGGTTTTTAAGG 41 19 1 * ******* ** MAP Score: 3.39175 Motif 15 GAGCTTGGCTACGACGACCTTGAGAGCCTCAAGA 10 101 1 AACAACGCAGAGGCAGCCCGTGAATCCGGTCCCG 10 241 1 ATCAACCTTTCGCAAGACCATGAAAACACCTGTG 16 30 0 AAAAGTGCAATTGAAGCCCTTGAGATGCTTTGCT 17 35 1 ATGCTTTGCTCGGATGACCTTGAAAGTACGCTTC 17 59 1 AGGTTTCCCTCTGAAGTCCCTGAATGAGGAACCG 25 220 0 CAACATGGGCCTGAGGCCCGAGAAAGTTATGAGG 29 77 1 GCTCCTCGGATGTTCGTGAGGATTATTAAA 52 6 1 * ** * ** **** MAP Score: 2.26601 Motif 16 TTCTAATTTGGAGGTGTTTAG 3 93 1 GGTAGTTTTAGAGGTTTTTACTATTTTTCA 11 19 1 AAACATAGAAGAATTTTTTATATAGCTCTT 18 44 1 CCCAAATTTTTAATTTTTTAGAGGTGATAC 22 13 1 GACAGGCCTCGAGGTTTTCAGACCGTGCAA 30 130 1 CAAAAGTTTTTAGCTTGCCGTC 34 2 1 GTACTGGTGAAAGTTTTTAAGAGGGAAAAA 39 17 1 CTTTTTTAATTAGGTTTTTAAGG 41 20 1 AAGATTTGGCGAGGTTTTAAATTTACGAGT 45 64 0 GGAGTTAGAGGTGGTTTTAA 51 0 0 CAAAGGTAAGTAGTTTTTAAAACTTAGCTT 51 155 0 GTTTGGTGAGAAATTTTTAATAATCCTCAC 52 25 0 CGGAATGACTAAGTTTTTAAATTGCCAAGT 53 31 1 AAAACCCAGGAAGTTTTTTAACTTTTGTTT 57 18 1 GTCATGCGGAGAGGTTTAAATCTTTTGAGA 57 50 0 TCAAAAAGTTTTTTATTTTTGAATT 58 5 1 ********** MAP Score: 1.05888 Motif 17 TCAAAAAACGCCGGCAAAAACGATTATCGCAGCAATTG 1 41 0 GAGTTTAAAACCGCCTAAAGCTCTTCTCCAGCAAATCC 1 152 1 GATCCTCACACCTGCAAACAACCTTCCTGTCCTTCACG 10 34 0 TACCTCATCATCCCCGCAGAGCCTTATCGTGGCATCTC 17 209 0 AACACCACCGAAAGTAGATTGCGAAAATAAAA 19 64 0 AGCACTATGCCCACCTCAAAATTTTTTCCCACCTGACT 27 81 0 ACCAGCCCCACCAGCTAAAAGAATTCTTTTCAAATTGA 35 95 1 GCTTTCACCTCATAGCCTTTTCTCCACAAATT 37 52 0 TGGATTTTTCCCTCTTAAAAACTTTCACCAGTACACAC 39 13 0 AAAACTGCCGCCAGCAAATACGCTTTACAGGTAACCAA 43 25 0 AAATTTAAAACCTCGCCAAATCTTTTATACTTTAAATT 45 70 1 TTTTGTGAGGTCACCGAAAGGGAATAATCTTTTAAGTT 46 29 0 TAAAAATTTCTCACCAAACGCTTTTATAAGTTCGTTAC 52 36 1 AACTCTGAAGTCACTTAACAGCCATTTCAAAAGCTGGA 54 36 1 GCTGGTGCTGCCCGCTAAAACGAATGATAACTCTCATC 54 102 1 CTTTGATGCGTCAGGTAAAAAGTTTTCCCATCATAACA 54 148 0 ** ** ** * ** * MAP Score: 0.0806499