AlignACE 3.0 10/20/99 AlignACE2 -i AG/AG_operons006_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944242333 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 AF0003 300 A. fulgidus predicted coding region AF0003 #1 AF0004 266 RNase L inhibitor #2 AF0005 38 A. fulgidus predicted coding region AF0005 #3 AF0006 104 corrinoid methyltransferase protein (mtaC-1) #4 AF0008 73 oxalate/formate antiporter (oxlT-1) #5 AF0014 95 A. fulgidus predicted coding region AF0014 #6 AF0016 54 A. fulgidus predicted coding region AF0016 #7 AF0018 22 3-ketoacyl-CoA thiolase (acaB-1) #8 AF0033 36 acyl carrier protein synthase (acaA-1) #9 AF0135 59 conserved hypothetical protein #10 AF0136 103 A. fulgidus predicted coding region AF0136 #11 AF0194 300 A. fulgidus predicted coding region AF0194 #12 AF0195 22 A. fulgidus predicted coding region AF0195 #13 AF0196 131 medium-chain acyl-CoA ligase (alkK-1) #14 AF0197 86 acetyl-CoA synthetase (acs-1) #15 AF0283 168 3-ketoacyl-CoA thiolase (acaB-7) #16 AF0438 79 3-ketoacyl-CoA thiolase (acaB-8) #17 AF0439 82 transcriptional regulatory protein, AsnC family #18 AF0442 300 succinoglycan biosynthesis regulator (exsB) #19 AF0968 205 3-ketoacyl-CoA thiolase (acaB-10) #20 AF0970 101 A. fulgidus predicted coding region AF0970 #21 AF1065 51 conserved hypothetical protein #22 AF1066 57 N5,N10-methylenetetrahydromethanopterin reductase (mer-1) #23 AF1196 65 N5,N10-methylenetetrahydromethanopterin reductase (mer-2) #24 AF1197 300 3-ketoacyl-CoA thiolase (fadA-2) #25 AF1289 300 conserved hypothetical protein #26 AF2409 42 iron-sulfur cluster binding protein #27 AF2410 43 A. fulgidus predicted coding region AF2410 #28 AF2411 41 conserved hypothetical protein #29 AF2412 39 thiamine biosynthesis protein (thiC) #30 AF2414 67 conserved hypothetical protein #31 AF2416 115 3-ketoacyl-CoA thiolase (acaB-12) Motif 1 AATGTCTCGCTTTCAATCCCATTT 0 1 0 TCCTGACGGGTTGAAATCAGACCAAAATGGGAT 0 54 1 GTCGTCTGCCTTTCAATCCCATTTTGGTCTGAT 0 69 0 CAAGGAACAGTTGAAATCAGACCAAAATGGGAT 0 122 1 ATGTTCTTACTTTCAATCCCATTTTGGTCTGAT 0 137 0 AGCTCCCAAGTTGAAATCAGACCAAAATGGGAT 0 195 1 CGCCATTGCCTTTCAATCCCATTTTGGTCTGAT 0 210 0 CCGGCGTTTTTTGAAATCAGACTAAAGTGGGAT 1 65 1 GCAACAGTTTTTAAAATCGGAGTACCACTACTG 15 15 0 ACACAGTAAGTTGAAATCAGACCAAAATGGGAT 18 14 1 ACACGTCCACTTTCAATCCCATTTTGGTCTGAT 18 29 0 GTCATCGCCCTTTAAACCACAATATTCATAAAT 18 248 0 ATTATCTATTTTTAAATCGGCACATTACGTAAA 19 165 1 ATACACTCATTTTAAATATCAATCAACATTAGT 20 51 1 TTTTTTCTTATTAAAATACCATCCGGGTCCAAT 24 261 0 CTCGGATAATTTTCAATCGCATCGGTGACCC 31 8 0 ** ***** ** * MAP Score: 27.9511 Motif 2 CGGGTTGAAATCAGACCAAAATGGGATTGAAAGGCAGA 0 60 1 ACAGTTGAAATCAGACCAAAATGGGATTGAAAGTAAGA 0 128 1 CAAGTTGAAATCAGACCAAAATGGGATTGAAAGGCAAT 0 201 1 GGTGTTCAGAAAAAAGAGGAAAAGTAAAAAACA 1 5 1 TTTTTTGAAATCAGACTAAAGTGGGATTACGTAAATTT 1 71 1 GAAACAAAACTCAGACCGACGAGAGTTTAAAACCGCCT 1 130 1 AGCACTCATCTCTGCTTAAGAGGGGATTCGCG 4 51 1 GGATATTTTTTCTGAACAAATGGTGGTTGT 5 75 1 GCTAATAGAAGGAGATTGAGTAGGGGTTGAAGGAACAC 10 13 1 GGTTCTTTGGGCTGATGGAGCAGAAGCTCCATCTGTTT 11 65 1 TCATCAAAATTCAGGCTCATGTGAGGCTTAACGTAATT 11 133 0 GAGCCTGAATTTTGATGAACTGGAGACTCCTTACCAAG 11 153 1 TAAGTTGAAATCAGACCAAAATGGGATTGAAAGTGGAC 18 20 1 CTCTGCTACCGTCGAGGTATCCGGGAGTTGT 24 3 0 GATGGCTGCAGTGGATGAAGACGTGGATGTTGTGGGCA 25 40 1 ATATTGTCGAGCTGAAAAAGATGGGGGTTGATGAAGTG 25 198 1 TCAAAACCAAGCTGCCAGAAAAGAGGAAGAAAGA 25 276 1 TTGAAAATTATCCGAGGGAGCCGAAGGTTTGGGAGAAG 31 25 1 ATGCAATATATCTGAAGCACAGGAGGAAGATAAAGGC 31 88 1 ** ** * **** * MAP Score: 24.5127 Motif 3 CTTTCAATCCCATTTTGGTCTGATTTCAACCCGTC 0 58 0 CTTTCAATCCCATTTTGGTCTGATTTCAACTGTTC 0 126 0 CTTTCAATCCCATTTTGGTCTGATTTCAACTTGGG 0 199 0 ATTAGAAAATCTTTTTCCTCTTGCCACGCTTGCCA 0 256 0 AAGATTTTCTAATTTTTTTATGAATGTAGATT 0 278 1 TTTACTTTTCCTCTTTTTTCTGAACACC 1 3 0 TACGTAATCCCACTTTAGTCTGATTTCAAAAAACG 1 69 0 AAAGTCAGATAATTTTGTTATGAACTGATTCATAA 3 32 1 TTTTAATTAACTTTTTGTTGTTAATTAATTATTTA 5 37 1 ATTTATCAGGATATTTTTTCTGAACAAATGGTGGT 5 67 1 AATTCCTTAAAAATTTAATATTTGCTCATTAATAA 9 27 1 GATGATAATGAATTTAAATTTGCTCATTAAATGTT 14 43 1 ATATCCAAAAAATTTAAGTTTGCTCTGCCAATAGT 15 83 0 TAGTCGTGTAATATTTAATGTTTTCGTGAAATATG 16 45 0 GCAAACATAAAATTTTTATATTTTTAGTTTACTTT 17 51 1 CTTTCAATCCCATTTTGGTCTGATTTCAACTTACT 18 18 0 CCTCCCCCCGCATTTAGTTCTGTTCGTTGAGTTTG 18 119 0 CCTATGCAGAATTTTTCATCTGAGCGGGGGTTGCC 18 213 0 TTATTTTTATATTTTTGTTTTTAACACGCTGTTTT 19 14 1 ACGCGTTTAGATTTTTCATTTGCTCTCGTAATTAA 19 81 0 CATTACGTAAAATTTAAGTATTAACGAA 19 187 1 TTTTAATTTTTATTTTTTCCAACAGATAG 23 4 1 ACACCTCCTTCACTTTTTTCTTATTAAAATACCAT 24 272 0 ****** * ** * MAP Score: 21.582 Motif 4 TCCTGACGGGTTGAAATCAGACCAAAATGGGATTGA 0 54 1 CAAGGAACAGTTGAAATCAGACCAAAATGGGATTGA 0 122 1 AGCTCCCAAGTTGAAATCAGACCAAAATGGGATTGA 0 195 1 CCGGCGTTTTTTGAAATCAGACTAAAGTGGGATTAC 1 65 1 CCGACGAGAGTTTAAAACCGCCTAAAGCTCTTCTCC 1 145 1 GCTTTAACCGTTTAAAAATCCCCAAACGCCCAAACC 1 211 1 AGGGTGTTCCTTCAACCCCTACTCAATCTCCTTCTA 10 18 0 ATATATAGGCTTCAAACCACTCAAAATAAAGAAAGG 15 114 1 ACACAGTAAGTTGAAATCAGACCAAAATGGGATTGA 18 14 1 CCTAAAATAAATCGAAAAGATTATTTG 22 1 1 AGAGCTGTTATTCAACACGTCCTCAACGTTACGTCC 24 151 0 AGTTTAAAAAAAGGCGCAAAGGCAAAAAA 29 20 0 ** *** * * *** MAP Score: 20.6451 Motif 5 TTTTTTTTAATTAACTTTTTGTTGTTAATT 5 33 1 GAAAACTTTAACTTTTTGTCAAAATAA 11 283 0 TGAGCAAATATTAAATTTTTAAGGAATTTA 9 25 0 ATTTAAATTTTTTCATTTATGA 20 89 0 CAGAGCAAACTTAAATTTTTTGGATATATA 15 91 1 ATACACCTCCTTCACTTTTTTCTTATTAAA 24 279 0 ACTTGATATATTCAATTTTTACGCGTTTAG 19 106 0 TTGAGCATAATTCAATTTTTTAAGATGATA 14 20 1 ATTTTTATTTTTATATTTTTGTTTTTAACA 19 10 1 CATAAAATTTTTATATTTTTAGTTTACTTT 17 56 1 TCATACTATATGAACTTTTTTAAAAA 28 6 0 TACCAGTAAGTTCTCTTTTTAATAACGATA 6 32 0 TTTTTAACTTTTCTTTGTCAATT 6 3 1 TTTTACGCGTTTAGATTTTTCATTTGCTCT 19 90 0 TTTTAATTTTTATTTTTTCCA 23 1 1 CGACTATCCGTTAACTTTATAAATGGTTGG 30 34 1 AAATGGTTGGTTAACTTATTATT 30 54 1 AATCATTTTATAAAATTTTTTTTAATTAAC 5 18 1 TCGTTAATACTTAAATTTTACGTAATGTGC 19 184 0 ********** MAP Score: 20.2433 Motif 6 TAATGTCTCGCTTTCAATCCCATTT 0 0 0 CGTCGTCTGCCTTTCAATCCCATTTTGGTCTGATT 0 68 0 GATGTTCTTACTTTCAATCCCATTTTGGTCTGATT 0 136 0 TCGCCATTGCCTTTCAATCCCATTTTGGTCTGATT 0 209 0 AACGCCCAAACCTTAAATACCAAACCGCCCATCGA 1 235 1 ATAGGGTGTTCCTTCAACCCCTACTCAATCTCCTT 10 21 0 TACACGTCCACTTTCAATCCCATTTTGGTCTGATT 18 28 0 GGGATTCGAACCCTCGAACCCCTACGGGACAGGAC 18 152 1 CGGGACAGGACCCTCAATCCTGCGCCTTTGTCCGC 18 176 1 CTTTGTCCGCTCGGCAACCCCCGCTCAGATGAAAA 18 201 1 CTCATCAAAACCGTAAACACCAATCTGCGTTATCA 24 80 0 TCCACTGCAGCCATCGCCACCTCCTGCGGTGTGCG 25 20 0 AATAAACACTTCATCAACCCCCATCTTTTTCAGCT 25 207 0 GTGTTTATTCCCGGCACCCCCATTTCGGAAATTGT 25 233 1 ATTGTTGAGTTTATCAAAACCAAGCTGCCAGAAAA 25 263 1 ** **** *** * MAP Score: 19.6782 Motif 7 GAGACATTAACACAATTTATTGGGCATGTCCTGA 0 26 1 GGGTTGAAATCAGACCAAAATGGGATTGAAAGGC 0 61 1 AGGCAGACGACGTACACTACTGGGGCGTTGTCAA 0 91 1 CAGTTGAAATCAGACCAAAATGGGATTGAAAGTA 0 129 1 AAGTTGAAATCAGACCAAAATGGGATTGAAAGGC 0 202 1 TTTTTGAAATCAGACTAAAGTGGGATTACGTAAA 1 72 1 GTGAACCATCCACAAACGAATGGGAAGATAGAGA 11 31 1 AAGTTGAAATCAGACCAAAATGGGATTGAAAGTG 18 21 1 ACTCAACGAACAGAACTAAATGCGGGGGGAGGGA 18 122 1 TCTGGACTTCCGGAAGGCACTGGCCCCTACAGGG 24 46 1 GTTATTCCGACAGACGATATTGTCGAGCTGAAAA 25 182 1 ***** * **** MAP Score: 19.6388 Motif 8 GATTTTATTTAAGATTTGCCTTTTTTGATAGCAT 8 12 0 ATTTAAATTTTTTCATTTATGAACACAA 20 83 0 TTTTAATTTTTATTTTTTCCAACAGATA 23 2 1 GCAATTGTTTTTTACTTTTCCTCTTTTTTCTGAACA 1 12 0 ACATAAAATTTTTATATTTTTAGTTTACTTTCATAC 17 55 1 ATTTTTATTTTTATATTTTTGTTTTTAAC 19 3 1 TTTTTACGCGTTTAGATTTTTCATTTGCTCTCGTAA 19 85 0 AATTTATTCATTAAGCTTTAACCGTTTAAAAATCCC 1 197 1 GGTTTGGTATTTAAGGTTTGGGCGTTTGGGGATTTT 1 225 0 TTTTTTTTAATTAACTTTTTGTTGTTAATTAATTAT 5 33 1 AAGTAGTCGTGTAATATTTAATGTTTTCGTGAAATA 16 47 0 CCTTAAAAATTTAATATTTGCTCATTAATAATTGTT 9 31 1 TGATAATGAATTTAAATTTGCTCATTAAATGTTATA 14 45 1 AGGAAAGCAAATAATCTTTTCGATTTATTTTAGG 22 8 0 ATATAAAAATTTTATGTTTGCCATTAAATGGCAATT 17 36 0 GGCACATTACGTAAAATTTAAGTATTAACGAA 19 183 1 **** *** *** MAP Score: 17.0257 Motif 9 AGGAAAAAGATTTTCTAATTTTTTTATGAAT 0 272 1 GCAGCAATTGTTTTTTACTTTTCCTCTTTTT 1 20 0 AGAAGGCCTATTTTCTAATTTGGAGGTGTTT 3 81 1 TTTTTTCTTATTTATGAACCAGT 4 2 1 TTATAAAATTTTTTTTAATTAACTTTTTGTT 5 25 1 TTTTTAACTTTTCTTTGTCAA 6 0 1 AAATTTAATATTTGCTCATTAATAATTGTTA 9 37 1 ATTTTTGATTAATTGTTATGT 10 92 0 ATGAGCACGATTTGTTTATTTATGATGATAA 13 56 1 TGAATTTAAATTTGCTCATTAAATGTTATAA 14 51 1 CATAAAAGCCTTTCTTTATTTTGAGTGGTTT 15 127 0 AAACATAAAATTTTTATATTTTTAGTTTACT 17 53 1 ATTTTTATTTTTATATTTTTGTTTTTAA 19 7 1 ACGCGTTTAGATTTTTCATTTGCTCTCGTAA 19 85 0 TATTGCCAGATTTGTTAATTATAAAAA 20 6 0 ATTTAAATTTTTTCATTTATGAACACAA 20 83 0 GATTATTTGCTTTCCTGCTTTCCCCCAAATG 22 28 1 CAACAGGGAGATTTCTCATTACTTATACTTT 23 41 0 TCCTTCACTTTTTTCTTATTAAAATACCATC 24 271 0 ****** **** MAP Score: 15.2252 Motif 10 CCATTTTGGTCTGATTTCAACCCGTCAGGA 0 54 0 GCCTTTCAATCCCATTTTGGTCTGATTTCA 0 65 0 CCATTTTGGTCTGATTTCAACTGTTCCTTG 0 122 0 TACTTTCAATCCCATTTTGGTCTGATTTCA 0 133 0 CCATTTTGGTCTGATTTCAACTTGGGAGCT 0 195 0 GCCTTTCAATCCCATTTTGGTCTGATTTCA 0 206 0 CCACTTTAGTCTGATTTCAAAAAACGCCGG 1 65 0 CCAGTAAGTTCTCTTTTTAATAACGATAAT 6 30 0 TTAAGATTTGCCTTTTTTGATAGCATTG 8 8 0 CACAGAAAAACTTATTTTGACAAAAAGTTA 11 272 1 ACCACCACCCCTTTTTTATTGAATAATA 13 113 0 CCATTTTGGTCTGATTTCAACTTACTGTGT 18 14 0 CACTTTCAATCCCATTTTGGTCTGATTTCA 18 25 0 TTTTAACACGCTGTTTTTAGCGTACTGTAT 19 32 1 TGCAGATACACTCATTTTAAATATCAATCA 20 46 1 AAAGCAAATAATCTTTTCGATTTATTTTAG 22 11 0 TCCCGGCACCCCCATTTCGGAAATTGTTGA 25 241 1 TCTTTCTTCCTCTTTTCTGGCAGCTTGGT 25 281 0 ********** MAP Score: 10.6701 Motif 11 ATCAGAAAATCTTATAAGGATTG 2 2 1 GTAGCTTCCTCAGAAAAGCTTGGTAAGGAGT 11 178 0 CGGGATATCACAGAAAAACTTATTTTGACAA 11 264 1 GGCGCAAAGGCAAAAAAACTTTGCCCG 29 6 0 TGAACTGATTCATAACAGCTTTTATCTTTAG 3 52 1 TAATGGCAAACATAAAATTTTTATATTTTTA 17 46 1 AGCAGGAAAGCAAATAATCTTTTCGATTTAT 22 16 0 ATTTACTCAACATAAAAGCCTTTCTTTATTT 15 137 0 AATCAAAAGTCAGATAATTTTGTTATGAACT 3 27 1 ATAAAAAAATTAGAAAATCTTTTTCCTCTTG 0 268 0 AACCTCAAGAAAAGCTTTGAAA 12 5 0 GCGATGACTTCATATAACTTTGAAATCCACC 18 273 1 TGAACCAGTTCATAACAGCCTTTATTTAGCA 4 24 1 ACACTTTCCACAAATAAATTTACGTAATCCC 1 93 0 TCACGACAAATCATTTTATAAAATTTT 5 6 1 GTAAAAAATTTTTGACAATCCT 2 26 0 TATGAGTATTCATAAATACTTTATCATCATA 13 76 0 AAGTTAATTAAAAAAAATTTTATAAAATGAT 5 19 0 ******* *** MAP Score: 10.5311 Motif 12 GGGTTGAAATCAGACCAAAATGGGATTGAAAGGCAGAC 0 61 1 CAGTTGAAATCAGACCAAAATGGGATTGAAAGTAAGAA 0 129 1 AAGTTGAAATCAGACCAAAATGGGATTGAAAGGCAATG 0 202 1 GGTGTTCAGAAAAAAGAGGAAAAGTAAAAAACAA 1 6 1 AAGGGTGTTTGAGTACGGGAGGTGGTTGTTTGAGGAGT 11 216 1 AAAGATTTTGCAGCAAACTATGCAACAGTTTTTAAAAT 15 31 0 AAGTTGAAATCAGACCAAAATGGGATTGAAAGTGGACG 18 21 1 ACTCAACGAACAGAACTAAATGCGGGGGGAGGGATTCG 18 122 1 GGGGGTTGCCGAGCGGACAAAGGCGCAGGATTGAGGGT 18 185 0 CGGTTTTGATGAGCAAACGAAGAGAATGAAGCTCTTAG 24 102 1 GCGCTTCATGAAGGACGTAACGTTGAGGACGTGTTGAA 24 139 1 GTATTTTAATAAGAAAAAAGTGAAGGAGGTGTATT 24 275 1 TGGCCTTCACCGCACACCGCAGGAGGTGGCGATGG 25 7 1 GCGATGGCTGCAGTGGATGAAGACGTGGATGTTGTGGG 25 38 1 CGATATTGTCGAGCTGAAAAAGATGGGGGTTGATGAAG 25 196 1 GGCAGTTGAAAAGGTTTATGTTGATGCTGC 26 2 1 GGAGAAGATTGAGAGGAAGGCGTATGTGGATTATGCAA 31 56 1 ATATCTGAAGCACAGGAGGAAGATAAAGGC 31 95 1 *** ** ** * * * MAP Score: 8.68008 Motif 13 GGGTTGAAATCAGACCAAAATGGGATTGAA 0 61 1 TGTCAAGGAACAGTTGAAATCAGACCAAAA 0 119 1 CAGTTGAAATCAGACCAAAATGGGATTGAA 0 129 1 GGTAGCTCCCAAGTTGAAATCAGACCAAAA 0 192 1 AAGTTGAAATCAGACCAAAATGGGATTGAA 0 202 1 CAAGCGTGGCAAGAGGAAAAAGATTTTCTA 0 259 1 GTTCAGAAAAAAGAGGAAAAGTAAAAAACA 1 13 1 ATTTATGAACCAGTTCATAACAGCCTTTAT 4 19 1 ACAATTATTAATGAGCAAATATTAAATTTT 9 36 0 TCAATTTTTTAAGATGATAATGAATTTAAA 14 31 1 GGAACACAGTAAGTTGAAATCAGACCAAAA 18 11 1 AAGTTGAAATCAGACCAAAATGGGATTGAA 18 21 1 GATATCTCTGATGACGAAAAGAAGATTTAC 18 60 0 AACCCCCGCTCAGATGAAAAATTCTGCATA 18 216 1 AATTAATTACGAGAGCAAATGAAAAATCTA 19 79 1 TGCCTTCCGGAAGTCCAGAACTTTCTCTGC 24 35 0 CCACCAACAAGAGAGGAAATCGACACACTT 24 226 1 GTTATTCCGACAGACGATATTGTCGAGCTG 25 182 1 GGCAGTTGAAAAGGTTTATGTT 26 2 1 ********** MAP Score: 6.63196 Motif 14 AATGGGATTGAAAGGCAGACGACGTACACTA 0 79 1 AATGGGATTGAAAGGCAATGGCGACTTTTGC 0 220 1 AAGCGTGGCAAGAGGAAAAAGATTTTCTAAT 0 260 1 AGAGCTAATAGAAGGAGATTGAGTAGGGGTT 10 10 1 GTGTTTGAGTACGGGAGGTGGTTGTTTGAGG 11 220 1 GGGAAAACAGGAAGTTACCGTTTTCCC 13 6 1 GTTGTTGTTCGGGGGAAAACGGTAACTTCCT 13 18 0 CGGAACACAGTAAGTTGAAATCAGACC 18 6 1 TTATCATCCCGGAGGAAGTCGAGTACACCGA 24 194 1 CACCAACAAGAGAGGAAATCGACACACTTAA 24 227 1 AGAAAAAAGTGAAGGAGGTGTATT 24 286 1 ACCGCACACCGCAGGAGGTGGCGATGGCTGC 25 18 1 CTGCCAGAAAAGAGGAAGAAAGA 25 287 1 ATGTTATGAAACAGGAGATTGCGAAA 27 27 1 GAGAAGATTGAGAGGAAGGCGTATGTGGATT 31 57 1 TATCTGAAGCACAGGAGGAAGATAAAGGC 31 96 1 ********* * MAP Score: 2.77656 Motif 15 GCCTTTCAATCCCATTTTGGTCTGATTTCAAC 0 63 0 TACTTTCAATCCCATTTTGGTCTGATTTCAAC 0 131 0 GCCTTTCAATCCCATTTTGGTCTGATTTCAAC 0 204 0 TTTACGTAATCCCACTTTAGTCTGATTTCAAA 1 74 0 CGGTTTTAAACTCTCGTCGGTCTGAGTTTTGT 1 133 0 AGCTTAATGAATAAATTTGGTGGTGGATTTGC 1 182 0 CACTTTCAATCCCATTTTGGTCTGATTTCAAC 18 23 0 TCCTGCTTTCCCCCAAATGGTGATATT 22 40 1 ACTCCCGGATACCTCGACGGTAGCAGAGAAAG 24 13 1 AGGGTGATAACGCAGATTGGTGTTTACGGTTT 24 76 1 TCGATTTCCTCTCTTGTTGGTGGTTCGGTGTA 24 217 0 AAAGAATTGGACCCGGATGGTATTTTAATAAG 24 256 1 GAGATGCTGATCCTCGTTGGTGGAGTTATTCC 25 158 1 TCCCGGCACCCCCATTTCGGAAATTGTTGAGT 25 241 1 ATAATTTTCAATCGCATCGGTGACCC 31 4 0 *** ******* MAP Score: 2.04444 Motif 16 CGTTGTCAAGGAACAGTTGAAATCAGACCAAAATGGG 0 116 1 TTGAAAGTAAGAACATCTCATAAACTTGTGTTGGACT 0 154 1 CGAGAGTTTAAAACCGCCTAAAGCTCTTCTCCAGCAA 1 149 1 AAAAATCCCCAAACGCCCAAACCTTAAATACCAAACC 1 224 1 CTTAAATACCAAACCGCCCATCGAGAACCA 1 246 1 GGGGTTGAAGGAACACCCTATACATCATCTCTCCCAA 10 35 1 TTGCGAGAGTGAACCATCCACAAACGAATGGGAAGAT 11 23 1 TATAGGCTTCAAACCACTCAAAATAAAGAAAGGCTTT 15 117 1 CATGCTTCTTGAACCTCCCAAACTCAACGAACAGAAC 18 101 1 GGAGGGATTCGAACCCTCGAACCCCTACGGGACAGGA 18 149 1 CGAGTACACCGAACCACCAACAAGAGAGGAAATCGAC 24 213 1 ***** ** * * * MAP Score: 2.02316 Motif 17 AATCTACATTCATAAAAAAATTAGAAAAT 0 281 0 GGTGTTCAGAAAAAAGAGGAAAAGT 1 5 1 ATGAATCAGTTCATAACAAAATTATCTGAC 3 35 0 ATGAACTGATTCATAACAGCTTTTATCTTT 3 51 1 ATGAACTGGTTCATAAATAAGAAAAAA 4 7 0 ATGAACCAGTTCATAACAGCCTTTATTTAG 4 23 1 CACCATTTGTTCAGAAAAAATATCCTGATA 5 70 0 ACATAACAATTAATCAAAAAT 10 92 1 GGTAGCTTCCTCAGAAAAGCTTGGTAAGGA 11 180 0 TCGGGATATCACAGAAAAACTTATTTTGAC 11 263 1 AACCTCAAGAAAAGCTTTGAAA 12 7 0 TACTTTATCATCATAAATAAACAAATCGTG 13 61 0 GTATGAGTATTCATAAATACTTTATCATCA 13 78 0 AATTATTATTCAATAAAAAAGGGGTGGTGG 13 110 1 TGCCAATAGTCCAGAACGACCATTAAAGAT 15 63 0 TATGTTGAGTAAATAAAGGCAAAA 15 154 1 TTAGTTGTGTTCATAAATGAAAAAATTTAA 20 79 1 CTTCGTTTGCTCATCAAAACCGTAAACACC 24 94 0 TCTTAGCGCTTCATGAAGGACGTAACGTTG 24 134 1 GGTATTTTAATAAGAAAAAAGTGAAGGAGG 24 274 1 AACCAAGCTGCCAGAAAAGAGGAAGAAAGA 25 280 1 GTTGATGCTGCAAGAAAAACGTC 26 29 1 ********** MAP Score: 0.369802