AlignACE 3.0 10/20/99
AlignACE2 -i AG/AG_operons063_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944244161
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	AF0260	30	glutamyl-tRNA synthetase (gltX)
#1	AF1731	21	A. fulgidus predicted coding region AF1731
#2	AF1778	105	stage V sporulation protein (spoVG)
#3	AF1779	57	2-hydroxyacid dehydrogenase, putative

Motif 1
GGGAAGTTGAGAAATATAAAG         	0	1	0
 GGCAAAAGTGAGGTAAAAATT        	1	2	0
AACGTTTCCTGCAATCAAAATTCTTATATA	2	42	1
GAACCCAGAAAAGATAAAAAGGTTTTGAAG	3	28	0
          **********
MAP Score: 0.800153