AlignACE 3.0 10/20/99
AlignACE2 -i AG/AG_operons064_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944244167
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	AF1100	122	acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA-1)
#1	AF2397	204	acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA-2)

Motif 1
 GAAGTTACTCCGCACAGCCCTTAAAATAGTAGCGG	0	9	1
AGCACCATAGCCGCAAAGGTTTATAAGGTATAAGTC	0	55	1
AAGGTATAAGTCGTAATTATGTTTTAATTGTTGGTT	0	79	1
CTTAGGTTAACCTAAATGTTATTAAAGCTTTCGGTT	1	15	1
AATTAAAGCTCCGGAATGGCAAAAATTGTAATGCTA	1	57	1
ATGGCAAAAATTGTAATGCTATATAATTTACTTTTG	1	72	1
TAACACTTTTTCGCAATTTTTTGTTACCAAAAGTAA	1	99	0
CGGAAATAAATCGAAAAGTTCTTAATTACAGGAAAA	1	149	1
          *** ** * * *  **
MAP Score: 4.4542