AlignACE 3.0 10/20/99
AlignACE2 -i AG/AG_operons067_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944244212
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	AF0242	50	glucose-1-phosphate thymidylyltransferase (graD-1)
#1	AF0244	115	cell division control protein 6, putative

Motif 1
TCTCCGTATAAAGCTTTTTCCATTCTCAAT	1	70	0
ACTCCCTCAAAAGCTTTTTATTCTTTTTGA	0	16	1
      TTAGAGACTATTTCCATTAAACTC	1	4	1
CCACCAATTCTGGCTAATTCCTCTCCGTAT	1	91	0
TTTACAATTGAATCATATTCACCGCCGAGA	1	32	0
          **********
MAP Score: 3.28692

Motif 2
ACTCCCTCAAAAGCTTTTTATTCTTTTTGA	0	16	1
AGAATGGAAAAAGCTTTATACGGAGAGGAA	1	74	1
          **********
MAP Score: 1.14532