AlignACE 3.0 10/20/99 AlignACE2 -i AG/AG_sum_all003_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944245419 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 AF0006 104 corrinoid methyltransferase protein (mtaC-1) #1 AF0008 73 oxalate/formate antiporter (oxlT-1) #2 AF0014 95 A. fulgidus predicted coding region AF0014 #3 AF0016 54 A. fulgidus predicted coding region AF0016 #4 AF0018 22 3-ketoacyl-CoA thiolase (acaB-1) #5 AF0021 38 signal-transducing histidine kinase #6 AF0208 112 signal-transducing histidine kinase #7 AF0275 266 surface layer protein B (slgB-1) #8 AF0276 53 conserved hypothetical protein #9 AF0277 75 signal-transducing histidine kinase, putative #10 AF0409 74 aspartate aminotransferase (aspB-4) #11 AF0410 56 signal-transducing histidine kinase, putative #12 AF0448 104 signal-transducing histidine kinase, putative #13 AF0770 300 signal-transducing histidine kinase #14 AF0893 300 signal-transducing histidine kinase #15 AF1034 89 methyl-accepting chemotaxis protein (tlpC-1) #16 AF1045 86 methyl-accepting chemotaxis protein (tlpC-2) #17 AF1049 102 type II secretion system protein (gspE-4) #18 AF1064 51 ABC transporter, ATP-binding protein, putative #19 AF1178 195 A. fulgidus predicted coding region AF1178 #20 AF1179 62 conserved hypothetical protein #21 AF1181 35 GTP-binding protein #22 AF1184 37 signal-transducing histidine kinase #23 AF1259 36 inosine monophosphate dehydrogenase, putative #24 AF1260 207 phosphoribosylformylglycinamidine synthase I (purQ) #25 AF1384 189 response regulator #26 AF1452 117 signal-transducing histidine kinase #27 AF1473 98 response regulator #28 AF1475 109 mitochondrial benzodiazepine receptor/sensory transduction protein #29 AF1484 87 A. fulgidus predicted coding region AF1484 #30 AF1515 199 signal-transducing histidine kinase #31 AF1621 78 conserved hypothetical protein #32 AF1638 31 ribulose bisphosphate carboxylase, large subunit (rbcL-2) #33 AF1639 30 signal-transducing histidine kinase #34 AF1721 182 signal-transducing histidine kinase #35 AF1766 74 amino-acid ABC transporter, periplasmic binding protein/protein kinase #36 AF1898 74 response regulator #37 AF2032 185 signal-transducing histidine kinase, putative #38 AF2249 66 response regulator #39 AF2251 30 competence-damage protein, putative #40 AF2252 78 argininosuccinate synthetase (argG) #41 AF2420 40 signal-transducing histidine kinase, putative #42 AF2421 58 leucyl-tRNA synthetase (leuS) #43 AF2425 85 methanol dehydrogenase regulatory protein (moxR) Motif 1 AGTCCAACTTTAAAAAATAGGGAAAA 8 37 0 AGTACTCAAAAAATTTAAAAAATT 33 3 0 GTTATTTTAAAAATTTAAAAATA 39 2 0 GATTAAACAAAAGTTAAAAAACTTCCTGGGT 40 21 0 TGTAATTTACAAGTTAAAAAATCTTTTCTTG 38 36 0 GCTGCAAGCTAAGTTTTAAAAACTACTTACC 34 150 1 AACCAAAACAAAAATTAAAAA 26 0 0 ATTAACCAAAAAATTTAAATAGGAGCTAATA 9 39 1 TTTTGGGAGTAATTTTAAATACAATTTCCCC 31 21 0 TTAATTTTAAATAATCATTTGTA 22 2 1 TTGACAAAGAAAAGTTAAAAA 3 0 0 AAGCACTCGTAAATTTAAAACCTCGCCAAAT 28 60 1 CCGGTTTTCAAACTTATAAAAGCGGAAAAAG 30 33 0 TAAAGTAACGAACTTATAAAAGCGTTTGGTG 35 47 0 GTAGATTGCGAAAATAAAAAATAAAATTTTC 16 52 0 GGGAAATTCAAAAATAAAAAACTTTTTGA 41 8 0 TGTCTAGGGAAAAGTAAAAAAAGAAAAACCT 24 39 0 TCCTCGCCCCAAGGTAAAAAAGTTTTATTGG 6 16 1 TAGACTTGGCAATTTAAAAACTTAGTCATTC 36 33 0 AATTAAAAAAAATTTTATAAAATGATTTGTC 2 14 0 TTTTATCCTCAACATTTAAAAATTTTACTAT 25 160 0 TTTGGTGAGAAATTTTTAATAATCCTCACGA 35 23 0 TATCCCATTCAAAATTAAATATTTTTCGTGT 27 45 0 GATTTAATTCAAGATTAAATA 14 289 1 AACAAGAGAAAAGTTTAAATCCAGCTTTTGA 37 62 0 TTTGGCTTATAATATATAAAAGCCTTTTTCC 30 10 1 AGTTAAATTTAAAGTATAAAAGATTTGGCGA 28 82 0 GGCGAACCAAAACTTTTTAAAGCGCATGCTG 34 100 0 AAACACCTCCAAATTAGAAAATAGGCCTTCT 0 81 0 TCCCAAAACAAATTTTATATATGTTGGTACA 31 44 1 TTAATCTCAAAAGATTTAAACCTCTCCGCAT 40 46 1 CCTTTTTTTAAAAGTATAAACTCCACAGTAG 30 96 0 AACATAGAAGAATTTTTTATATAGCTCTTCT 15 45 1 CTGACGCATCAAAGTAGAAAATA 37 172 1 ** ******** MAP Score: 31.8502 Motif 2 AAAATAGGGAAAAAGAGTTTTTGATTGTGTTA 8 18 0 ATTTGAAAATAAAAGATTTTGTGAGGTCACCG 29 51 0 AGCTCTTCTCAAAAGAATTTCTCGGTGGTGGT 15 67 1 AAACTGCAAGAAAAGATTTTTTAACTTGTAAA 38 30 1 TATAATATATAAAAGCCTTTTTCCGCTTTTAT 30 17 1 AGTTAATTAAAAAAAATTTTATAAAATGATTT 2 17 0 AATTCTTTTCAAAAAAATTTATGTCTTTGTAT 6 50 0 ATTCAAAAATAAAAAACTTTTTGA 41 2 0 ACCAGTTCATAACAGCCTTTATTTAGCACTCA 1 27 1 GCTCTCACAACAGCGTTTTTTTGAAGAACT 37 8 1 ACTGATTCATAACAGCTTTTATCTTTAGAAGG 0 55 1 CTTTGTAAATAAAAGCATTTGGCCGATTATTC 26 81 0 ACGAACTTATAAAAGCGTTTGGTGAGAAATTT 35 39 0 CCCACCAGCTAAAAGAATTCTTTTCAAATTGA 24 101 1 AGTTCTCTGGAAAAGAGTTCATTGTAGTACAG 34 49 0 CTTCAAACATAGAAGAATTTTTTATATAGCTC 15 40 1 TTACTCCCAAAACAAATTTTATATATGTTGGT 31 40 1 CCCCAAGGTAAAAAAGTTTTATTGGTTTATAC 6 22 1 AATCCCAAATAAAAAGCTTTATAAAAACAAAC 30 160 1 TACTTTATAGAGAAAATTTTATTTTTTATTTT 16 41 1 AACAAAAGTTAAAAAACTTCCTGGGTTTTCAG 40 15 0 TTCTCGCTAAAAACGCCTTTTTTTAAAAGTAT 30 110 0 TTAACTGAACAGCAAAGTTTATATTCATCGTC 11 17 1 CATGCGCTTTAAAAAGTTTTGGTTCGCCCAGG 34 103 1 ****** *** * MAP Score: 30.3966 Motif 3 GGATTAACTGCCGCTCTGCTTCTGCTTGCACTGCTGCAA 7 141 1 AAACGCAGCTACCATAACTGGCTGCACTCAAATTCAGAG 7 185 1 TACCTCAGTTACCTTGCCACTCTGCTCCCCTGCTCTGCT 13 163 0 TGGAGATGCCACGATAAGGCTCTGCGGGGATGATGAGGT 13 207 1 CGTCCGGGGTTAGCCTGCTCCCTTCCGGGCCT 14 3 1 CGCCATATTAGCCGGGGGGAACGGCCCAGGCCCGGAAGG 14 30 0 TGGCCGGGCTGCCCGGAGGGGCTGTCCGCCATATTAGCC 14 56 0 GGGCAGCCCGGCCATAACCGCCGGCCCTCCGGGACGAGG 14 81 1 ACTCTGCGGTGCCTGGAACCGCTGCCGCCCGCTTGACAG 14 120 1 TGACAGGCCTCCCCTCGGCTTCGGCCCCCGCGTATCGGC 14 153 1 GGTGGGCTAGGCCGGGGGGTTCGGCGTCCCCTGTAACCC 14 198 0 TTCGTTGCCAGCCTGTAAACTCTGTTTACAATCTCCTCT 19 10 0 CGTGTCGGCAGCGTTGATGTTCTGCACTCTTTAGTGCTA 24 142 0 TTGTTTGCTTCCGTGCTGGTGCTGCCCGCTAAAACGAAT 37 88 1 *** * **** * * MAP Score: 18.7735 Motif 4 AAATTCAGAGTCCGGGCTACTACGAGCTTGCCAGC 7 214 1 TTGCCACTCTGCTCCCCTGCTCTGCTTTCAGCCCA 13 154 0 TGGACAGGTTGCTGCTCTTCCAAGAAGTC 13 281 1 CCGGGCCTGGGCCGTTCCCCCCGGCTAATATGGCG 14 34 1 GGCGGTTATGGCCGGGCTGCCCGGAGGGGCTGTCC 14 68 0 GGCCATAACCGCCGGCCCTCCGGGACGAGGACTCT 14 90 1 TACAGGGGACGCCGAACCCCCCGGCCTAGCCCACC 14 202 1 AATTGATGCAGCCGAGCTACTTGGATACCAGTGCT 19 64 1 AAAAAATTAAGCCTTACTCCTTAGCGTCTTGCACG 19 153 0 ATACTACATCGCTGATTCCCAAAGCTGAAATTAAA 25 45 1 TGCCAGATGCGCCGCATTCCTTACCTCTTTAATTT 25 72 0 TGTGATTACCGCTGCTCCGCCAACATAATCAAAAA 27 13 0 AGAAGTAAAAGCTGTACTACAATGAACTCTTTTCC 34 38 1 **** ** ** ** MAP Score: 14.1375 Motif 5 TTACAGGGGACGCCGAACCCCCCGGCCTAGCCCACCA 14 201 1 GTTTCCCATAGCTCTAACCCTCCTACCATTCTTCCAA 43 39 1 TCCGGGCCTGGGCCGTTCCCCCCGGCTAATATGGCGG 14 33 1 AAAGGAATCAGACCAGCCCCACCAGCTAAAAGAATTC 24 84 1 CTAATATGGCGGACAGCCCCTCCGGGCAGCCCGGCCA 14 58 1 CCGGCCATAACCGCCGGCCCTCCGGGACGAGGACTCT 14 88 1 TAAATTTAAACAAGTTACCCTCCGAGCAGGGATAGGA 12 76 1 AGAACTTTTTCATCACTCCCACCACCAGCATGCGCTT 34 75 1 CAACAGTTATTAACCAGCCCGCCAACTGAATCCC 20 38 1 CCCTGCTCTGCTTTCAGCCCACCCACTTCTATTTCTG 13 138 0 TTTATTACCTCATCATCCCCGCAGAGCCTTATCGTGG 13 215 0 CGTGTGATTACCGCTGCTCCGCCAACATAATCAAAAA 27 13 0 GGAAGAGCAGCAACCTGTCCAGCAGCTTGCTCAGCAA 13 265 0 CCGGGGTTAGCCTGCTCCCTTCCGGGCCTGGGCCGTT 14 13 1 GCCCGCTTGACAGGCCTCCCCTCGGCTTCGGCCCCCG 14 146 1 CAAAAGTTATTTTTCCCTCCAAGTTATACAATTT 18 27 0 GTTACCTTGCCACTCTGCTCCCCTGCTCTGCTTTCAG 13 158 0 * * *** ** *** MAP Score: 14.1167 Motif 6 TGTTTAGAGGATTAACTGCCGCTCTGCTTCTGCTTGC 7 133 1 AGCCAGTTATGGTAGCTGCGTTTACTGTTTGCAGCAG 7 171 0 ATTTAAACAAGTTACCCTCCGAGCAGGGATAGGAT 12 79 1 CCCCTGCTCTGCTTTCAGCCCACCCACTTCTATTTCT 13 139 0 AGTTACCTTGCCACTCTGCTCCCCTGCTCTGCTTTCA 13 159 0 CCCTTGCTGAGCAAGCTGCTGGACAGGTTGCTGCTCT 13 262 1 GGGTTAGCCTGCTCCCTTCCGGGCCTGGGCCGTTCCC 14 16 1 GGCTAATATGGCGGACAGCCCCTCCGGGCAGCCCGGC 14 56 1 GCAGCCCGGCCATAACCGCCGGCCCTCCGGGACGAGG 14 83 1 TCCGGGACGAGGACTCTGCGGTGCCTGGAACCGCTGC 14 108 1 TGGAACCGCTGCCGCCCGCTTGACAGGCCTCCCCTCG 14 133 1 CCCTGTAACCCGAAACCGCCGATACGCGGGGGCCGAA 14 172 0 CTAGGCCGGGGGGTTCGGCGTCCCCTGTAACCCGAAA 14 194 0 AGAAAGGAATCAGACCAGCCCCACCAGCTAAAAGAAT 24 82 1 TGCAGAACATCAACGCTGCCGACACGGAAAAAGCTTA 24 155 1 AAGAGGTAAGGAATGCGGCGCATCTGGCAAAGATAGA 25 78 1 TTTTTCGTGTGATTACCGCTGCTCCGCCAACATAATC 27 18 0 CTTTTCTCTTGTTTGCTTCCGTGCTGGTGCTGCCCGC 37 80 1 * * **** **** MAP Score: 12.8261 Motif 7 CGCTCCTCCTCGCCCCAAGGTAAAAAAGTTTT 6 4 1 CCGGGGTTAGCCTGCTCCCTTCCGGGCCTGGGCCGTTC 14 13 1 GCCGTTCCCCCCGGCTAATATGGCGGACAGCCCCTCCG 14 44 1 GCGGACAGCCCCTCCGGGCAGCCCGGCCATAACCGCCG 14 66 1 CCGGCCATAACCGCCGGCCCTCCGGGACGAGGACTCTG 14 88 1 CGGGACGAGGACTCTGCGGTGCCTGGAACCGCTGCCGC 14 110 1 GGAACCGCTGCCGCCCGCTTGACAGGCCTCCCCTCGGC 14 134 1 TAACCCGAAACCGCCGATACGCGGGGGCCGAAGCCGAG 14 166 0 GTTACAGGGGACGCCGAACCCCCCGGCCTAGCCCACCA 14 200 1 CTGGACGATGCCTTCAATAAGACAGGCCTCGAGGTTTT 19 110 1 CTTCACACCTCTGATTATCCTGCGATTGACACTAT 27 73 0 CATTCCGATACCTTTTTGTGGCGAGGCA 36 0 0 AACCTCTGAAAACCCAGGAAGTTTTTTAAC 40 2 1 AAGATTTAAACCTCTCCGCATGACGGGATTGT 40 56 1 ***** ** ** * MAP Score: 11.3901 Motif 8 CTATTTTCTAATTTGGAGGTGTTTAG 0 88 1 TCATAGGTAGTTTTAGAGGTTTTTACTATTT 7 14 1 TAATCAGTTAAATTGGAGGTGAAAGTTTGGG 7 91 1 TTCTCCTTAATCTCACAGGTGTTTTCATGGT 12 17 1 CAAAAGAATTTCTCGGTGGTGGT 15 76 1 GAATAAGAAAATTCAGAAGTGTAA 16 3 0 CGCAATCTACTTTCGGTGGTGTT 16 73 1 CACTTTATTTTCTCATAGGTGATAA 21 4 0 ATCGCAGGATAATCAGAGGTGTGAAG 27 82 1 TTTCTAAAGGAGTTAGAGGTGGTTTTAA 34 7 0 CAAGTCTAATTTTTACAGGTGTCAGGAA 36 56 1 CTTCCTGGGTTTTCAGAGGTT 40 0 0 * ********* MAP Score: 10.2483 Motif 9 GCACTCATCTCTGCTTAAGAGGGGATTCGCG 1 52 1 AATTTGAGTGCAGCCAGTTATGGTAGCTGCGTTTACTGTTT 7 178 0 AGCAGGGGAGCAGAGTGGCAAGGTAACTGAGGTAAAAACTG 13 168 1 CCGGGGGGAACGGCCCAGGCCCGGAAGGGAGCAGGCTAACC 14 17 0 GAGGGGCTGTCCGCCATATTAGCCGGGGGGAACGGCCCAGG 14 39 0 ATATGGCGGACAGCCCCTCCGGGCAGCCCGGCCATAACCGC 14 61 1 CCGGCCATAACCGCCGGCCCTCCGGGACGAGGACTCTGCGG 14 88 1 GACGAGGACTCTGCGGTGCCTGGAACCGCTGCCGCCCGCTT 14 113 1 AACCCGAAACCGCCGATACGCGGGGGCCGAAGCCGAGGGGA 14 162 0 CCGGGGGGTTCGGCGTCCCCTGTAACCCGAAACCGCCGATA 14 185 0 TCTCTAAGATCGTCCTGTCTAGGGAAAAGTAAAAAAAGAAA 24 44 0 GGAATCAGACCAGCCCCACCAGCTAAAAGAATTCTTTTCAA 24 87 1 GTAAGGAATGCGGCGCATCTGGCAAAGATAGAGAATCCAGA 25 83 1 GTCTCCGCTTCGGGGAAATTGTATTTAAAATTA 31 2 1 AGTTTTGGTTCGCCCAGGCAAGGTAATTGCACTGCTGCAAG 34 117 1 * *** * ** * * * MAP Score: 6.91465 Motif 10 CGCTCCTCCTCGCCCCAAGGT 6 0 1 TTAGAGGATTAACTGCCGCTCTGCTTCTGCT 7 136 1 TAAACAAGTTACCCTCCGAGCAGGGATAGGA 12 82 1 TGCCACTCTGCTCCCCTGCTCTGCTTTCAGC 13 157 0 TTATTACCTCATCATCCCCGCAGAGCCTTAT 13 220 0 TTAGCCTGCTCCCTTCCGGGCCTGGGCCGTT 14 19 1 GCCTGGGCCGTTCCCCCCGGCTAATATGGCG 14 38 1 TGGCGGACAGCCCCTCCGGGCAGCCCGGCCA 14 64 1 GCCCGGCCATAACCGCCGGCCCTCCGGGACG 14 86 1 TGCCTGGAACCGCTGCCGCCCGCTTGACAGG 14 129 1 CTTGACAGGCCTCCCCTCGGCTTCGGCCCCC 14 151 1 GGGGACGCCGAACCCCCCGGCCTAGCCCACC 14 206 1 ATCCTCCCCCCTTCATTATAATAA 17 88 0 ACAGTTATTAACCAGCCCGCCAACTGAATCC 20 40 1 GTGTGATTACCGCTGCTCCGCCAACATAATC 27 18 0 AAAAGATTTAAACCTCTCCGCATGACGGGAT 40 54 1 * ********* MAP Score: 6.46896 Motif 11 AAGCAGAGCGGCAGTTAATCCTCTAAACAGTCCGAAATTTCCCAAA 7 116 0 AAATTCAGAGTCCGGGCTACTACGAGCTTGCCAGCGACATAACAGC 7 214 1 GGTGAGTTATGCAGAAATAGAAGTGGGTGGGCTGAAAGCAGAGCAG 13 127 1 GAGCAGGGGAGCAGAGTGGCAAGGTAACTGAGGTAAAAACTGGAGA 13 167 1 TGCTGAGCAAGCTGCTGGACAGGTTGCTGCTCTTCCAAGAAGTC 13 266 1 CGCCATATTAGCCGGGGGGAACGGCCCAGGCCCGGAAGGGAGCAGG 14 23 0 GGCGGTTATGGCCGGGCTGCCCGGAGGGGCTGTCCGCCATATTAGC 14 57 0 GGCCATAACCGCCGGCCCTCCGGGACGAGGACTCTGCGGTGCCTGG 14 90 1 GGCCTGTCAAGCGGGCGGCAGCGGTTCCAGGCACCGCAGAGTCCTC 14 116 0 ACCCGAAACCGCCGATACGCGGGGGCCGAAGCCGAGGGGAGGCCTG 14 156 0 TACAGGGGACGCCGAACCCCCCGGCCTAGCCCACCAAATAAAGTAT 14 202 1 AACAGAGTTTACAGGCTGGCAACGAACGCGCCCTACGGTATAATTG 19 23 1 TATAATTGATGCAGCCGAGCTACTTGGATACCAGTGCTTGATTGAG 19 61 1 CTTCAATAAGACAGGCCTCGAGGTTTTCAGACCGTGCAAGACGCTA 19 121 1 ACTAAAGAGTGCAGAACATCAACGCTGCCGACACGGAAAAAGCTTA 24 146 1 AACTTAGCTTGCAGCAGTGCAATTACCTTGCCTGGGCGAACCAAAA 34 119 0 ** * * ** * * * * MAP Score: 5.75912 Motif 12 CGCTCCTCCTCGCCCCAAGGTAAAAA 6 1 1 CCCCTGCTCTGCTTTCAGCCCACCCACTTCTATTT 13 141 0 TTACCTTGCCACTCTGCTCCCCTGCTCTGCTTTCA 13 159 0 CCGGGCCTGGGCCGTTCCCCCCGGCTAATATGGCG 14 34 1 GGCTAATATGGCGGACAGCCCCTCCGGGCAGCCCG 14 56 1 GGGCAGCCCGGCCATAACCGCCGGCCCTCCGGGAC 14 81 1 GGTGCCTGGAACCGCTGCCGCCCGCTTGACAGGCC 14 127 1 TACAGGGGACGCCGAACCCCCCGGCCTAGCCCACC 14 202 1 AAGGAATCAGACCAGCCCCACCAGCTAAAAGAATT 24 85 1 CTCTATCTTTGCCAGATGCGCCGCATTCCTTACCT 25 81 0 GAACTTTTTCATCACTCCCACCACCAGCATGCGCT 34 76 1 TTGCTTCCGTGCTGGTGCTGCCCGCTAAAACGAAT 37 92 1 *** ***** ** MAP Score: 2.51403 Motif 13 CGCTCCTCCTCGCCCCAAGGTAAAAAA 6 7 1 AACAAGTTACCCTCCGAGCAGGGATAGGAT 12 84 1 CTTTCAAGGTCATCCGAGCAAAGCATCTCA 13 55 0 ATTACCTCATCATCCCCGCAGAGCCTTATC 13 219 0 GCGGACAGCCCCTCCGGGCAGCCCGGCCAT 14 66 1 ACCGCAGAGTCCTCGTCCCGGAGGGCCGGC 14 100 0 GCTTGACAGGCCTCCCCTCGGCTTCGGCCC 14 150 1 ATCCTCCCCCCTTCATTATAAT 17 90 0 TTCCCATCTCCTAATACAAATGAT 22 23 0 CTTTTTCATCACTCCCACCACCAGCATGCG 34 79 1 TGCCTCGCCACAAAAAGGTATC 36 2 1 AAGATTTAAACCTCTCCGCATGACGGGATT 40 56 1 TAGCTCTAACCCTCCTACCATTCTTCCAAA 43 47 1 ********** MAP Score: 2.05918 Motif 14 GATGAGTGCTAAATAAAGGCTGTTATGAACT 1 30 0 AAAGTTAATTAAAAAAAATTTTATAAAATGA 2 20 0 ATTAATTAACAACAAAAAGTTAATTAAAAAA 2 35 0 GATAATTGACAAAGAAAAGTTAAAAA 3 5 0 AAACAAAAGATTGTGGTGCAA 5 27 0 ATTGTAACACAATCAAAAACTCTTTTTCCCT 8 14 1 ACTGATTATTAACCAAAAAATTTAAATAGGA 9 32 1 ATAAACAACGAAAATTGATGTGGAAAA 13 6 1 TCAGCAAGGGAATCAGAAGCTTTATTACCTC 13 241 0 TTTCTCTATAAAGTAAAATTTCGAATAAGAA 16 25 0 CCAAAAATGAAAGCAAAGGTTAATAGCAACA 17 37 1 AGGAGATTGTAAACAGAGTTTACAGGCTGGC 19 12 1 TTTCCCGTAAAATCAAAAATTCGACAACAGT 20 14 1 CAGGTAACCAAAACAAAAATTAAAAA 26 5 0 CCGCCAACATAATCAAAAACTT 27 1 0 ATCGCAGGATAATCAGAGGTGTGAAG 27 82 1 GCTATTTGAAAATAAAAGATTTTGTGAGGTC 29 55 0 CATAATCCCAAATAAAAAGCTTTATAAAAAC 30 157 1 TCGTGAGGATTATTAAAAATTTCTCACCAAA 35 23 1 TCAAAACTGCAAGAAAAGATTTTTTAACTTG 38 27 1 TTTTGAGATTAAACAAAAGTTAAAAAACTTC 40 27 0 GAAATTCAAAAATAAAAAACTTTTTGA 41 6 0 ** ******** MAP Score: 1.89643 Motif 15 TGTTTAGAGGATTAACTGCCGCTCTGCTTCTGCTTGCACTGC 7 133 1 ATTTAAACAAGTTACCCTCCGAGCAGGGATAGGAT 12 79 1 TGATTCCCTTGCTGAGCAAGCTGCTGGACAGGTTGCTGCTCT 13 257 1 GTCCGGGGTTAGCCTGCTCCCTTCCGGGCCTGGGCCGTTCCC 14 11 1 GGCTAATATGGCGGACAGCCCCTCCGGGCAGCCCGGCCATAA 14 56 1 CCCGGCCATAACCGCCGGCCCTCCGGGACGAGGACTCTGCGG 14 87 1 CTGTCAAGCGGGCGGCAGCGGTTCCAGGCACCGCAGAGTCCT 14 117 0 CGCCCGCTTGACAGGCCTCCCCTCGGCTTCGGCCCCCGCGTA 14 145 1 GGTTACAGGGGACGCCGAACCCCCCGGCCTAGCCCACCAAAT 14 199 1 AAGAGGTAAGGAATGCGGCGCATCTGGCAAAGATAGAGAATC 25 78 1 CTTTTCTCTTGTTTGCTTCCGTGCTGGTGCTGCCCGCTAAAA 37 80 1 * * **** * ** * MAP Score: 1.81307