AlignACE 3.0 10/20/99
AlignACE2 -i AP/AP_operons006_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944249235
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	APE0255	71	255aa long hypothetical mannose-1-phosphate guanyltransferase
#1	APES005	54	56aa long hypothetical DNA-directed RNA polymerase,subunit E
#2	APE0257	68	186aa long hypothetical DNA-directed RNA polymerase subunit E'
#3	APES006	101	56aa long hypothetical ferredoxin
#4	APE1181	300	355aa long hypothetical glucose-1-phosphate thymidylyltransferase
#5	APE1192	92	290aa long hypothetical dolichol monophosphate mannose synthase
#6	APE1193	104	195aa long hypothetical capsular synthesis regulator component B
#7	APE1208	300	360aa long hypothetical glucose-1-phosphate thymidylyltransferase
#8	APE2066	35	392aa long hypothetical N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein
#9	APE2090	31	208aa long hypothetical protein
#10	APE2291	164	239aa long hypothetical glucose-1-phosphate thymidylyltransferase

Motif 1
GCCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGTAGG	7	164	0
GTGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAACTT	10	24	0
AACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAA	7	19	1
GCCTACCACCTGGCGGTGGCGAGGGGCTACGACCCCG	7	181	1
CCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTCTA	7	251	0
TAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGTCTCAC	7	131	0
CACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGATTC	10	58	1
TCGGCATTTAGGTCATTGGATCGGAGCTAGAACTTAA	4	95	1
 CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT     	9	9	1
         CGCTCTTTGGCTAGGAGGACCTCGCTCG	1	1	1
AGCCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGG	7	271	1
CTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAG	10	86	0
CGGCAAACCTGTGGGGCGGCCCGGCGTACGGCGGGCC	3	73	1
AACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC  	2	43	1
TTTGCCGTGTGGAGGAAGACCGGGCACTCGAAGCTGC	3	43	0
AGCTCGATACACCAGAGGGCATCGAGGTCCTCAAAAT	7	80	1
GGGGCGCCAGTGTAACTGTGGTGGCGCCCAGCGACCT	7	41	1
CTATATATCTTTTTGGTGGCATGATGC          	4	283	1
GTCAGGCTACTGTGATAGAGCATGTGGGCTAAAATC 	0	9	0
          **  *  ***  ** **
MAP Score: 31.8767

Motif 2
GTAGACACCCTCCCCCAAAACCCAAGCTGGTTAAGAGAG	2	36	0
CGTACGCCGGGCCGCCCCACAGGTTTGCCGTGTGGAGGA	3	64	0
       GGGCCCGCCGTACGCCGGGCCGCCCCACAGGT	3	79	0
AACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATACACC	7	54	1
TCCTCAAAATGCCCCCCACAGGGGGTGAGACGCTGCTCG	7	107	1
GACGCTGCTCGACCCCTACTCCCTAACCCCCTACTTCCA	7	135	1
CTACTCCCTAACCCCCTACTTCCAGCTCCTAGCCTACCA	7	150	1
CCAGCTCCTAGCCTACCACCTGGCGGTGGCGAGGGGCTA	7	171	1
CGGGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCTA	7	179	0
GAGGGGCTACGACCCCGACAAGCCGAGGAACCTGGCTAA	7	201	1
TAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGGGGG	7	251	1
ACCGCTCCATCCCCCCTTATCCCGGTGGCTGGAGGGGGG	7	262	0
         GGCCTCCAAACCGCTCCATCCCCCCTTATC	7	280	0
 AACACCCCCGCCCCCGGCTACTCCTAGGCTG       	9	3	0
GAAGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACC	10	23	1
ACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAAGG	10	85	1
          ******  *  **     *
MAP Score: 25.0002

Motif 3
TGTAACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATA	7	51	1
GTGCAGCTTCGAGTGCCCGGTCTTCCTCCACACGGCAA	3	41	1
CCCCTACTCCCTAACCCCCTACTTCCAGCTCCTAGCCT	7	147	1
  GGGCCCGCCGTACGCCGGGCCGCCCCACAGGTTTGC	3	75	0
AGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACCA	10	25	1
CACAGGGGGTGAGACGCTGCTCGACCCCTACTCCCTAA	7	123	1
     GGCCTCCAAACCGCTCCATCCCCCCTTATCCCG	7	277	0
CCTGGCGGTGGCGAGGGGCTACGACCCCGACAAGCCGA	7	189	1
CTTTCGCTGTGGAACGATCTTCGTCCGCTAACTCTTAA	6	52	1
CGATAGAGATGAAGGCCCGGGGCGCCAGTGTAACTGTG	7	23	1
    AACACCCCCGCCCCCGGCTACTCCTAGGCTG   	9	7	0
   AAGTCTATTTAGCCTCGCCTTCCACACTCTCTTAA	2	7	1
TCACAGTAGAGTAAAGGCCCCCCTCCAGCCACCGGGAT	7	245	1
CTACGACCCCGACAAGCCGAGGAACCTGGCTAAGACGG	7	207	1
GTTCTTACATGCTACGAGCGAGGTCCTCCTAGCCAAAG	1	14	0
CGATACACCAGAGGGCATCGAGGTCCTCAAAATGCCCC	7	84	1
CACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAA	10	84	1
       GCTGTAGACACCCTCCCCCAAAACCCAAGCT	2	47	0
          *   *****  *  ** *
MAP Score: 24.0811

Motif 4
CCCCCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTCTAC	7	250	0
AGGTGGTAGGCTAGGAGCTGGAAGTAGGGGGTTAGGGAGTA	7	151	0
CACAGGTTTGCCGTGTGGAGGAAGACCGGGCACTCGAAGCT	3	45	0
TCTGGTGTATCGAGCTGCAGGTCGCTGGGCGCCACCACAGT	7	55	0
ACACTGGTGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAAC	10	26	0
CCACAAAAGCACCAGTGTAGGCAGCAGGGTCTGTGCACTCA	10	49	1
ATGCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTACTC	7	115	1
CACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCGGGCCC 	3	71	1
GAGGTGTATAAGATGCGGTAGGTGCAGCTTCGAGTGCCCGG	3	20	1
GAAGTTAAGAGTTAGCGGACGAAGATCGTTCCACAGCGAAA	6	53	0
TCTTAACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC  	2	39	1
          CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT	9	0	1
TTCCTCGGCTTGTCGGGGTCGTAGCCCCTCGCCACCGCCAG	7	190	0
GGCCTAGACTTGAAGCCCCAGTCGAACGGTGGATA      	8	10	1
TTCTTACATGCTACGAGCGAGGTCCTCCTAGCCAAAGAGCG	1	10	0
CCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGGCC    	7	273	1
GGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAAC	7	16	1
GGCCTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGT	10	85	0
CTGGTTAAGAGAGTGTGGAAGGCGAGGCTAAATAGACTT  	2	8	0
          *   * **  *  *  *** *
MAP Score: 22.6915

Motif 5
ACCACCTGGCGGTGGCGAGGGGCTACGACCCCG	7	185	1
GCCCCCCACAGGGGGTGAGACGCTGCTCGACCC	7	117	1
CTTGGGTTTTGGGGGAGGGTGTCTACAGC    	2	49	1
GCAAACCTGTGGGGCGGCCCGGCGTACGGCGGG	3	75	1
TATCCCGGTGGCTGGAGGGGGGCCTTTACTCTA	7	251	0
GTGTAACTGTGGTGGCGCCCAGCGACCTGCAGC	7	50	1
ACCGGGATAAGGGGGGATGGAGCGGTTTGGAGG	7	275	1
AGGAGTAGCCGGGGGCGGGGGTGTT        	9	16	1
TATCAATCGCTGGGCGGGCTGGCTGCGAATCTG	10	88	0
ATATCTTTTTGGTGGCATGATGC          	4	287	1
TAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGTC	7	135	0
TGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAA	10	27	0
GATGAAGGCCCGGGGCGCCAGTGTAACTGTGGT	7	30	1
          ***** * * ***
MAP Score: 20.4076

Motif 6
TATGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAG	7	12	1
GCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTACTC	7	117	1
AGCCTACCACCTGGCGGTGGCGAGGGGCTACGACCCCGA	7	180	1
CCAGCCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGG	7	269	1
TGGTGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAACTT	10	24	0
          GGCCTAGACTTGAAGCCCCAGTCGAACGG	8	0	1
        CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT	9	2	1
CCCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTCTAC	7	250	0
CCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGTAGGGGG	7	161	0
        CGCTCTTTGGCTAGGAGGACCTCGCTCGTAG	1	2	1
   GGGCCCGCCGTACGCCGGGCCGCCCCACAGGTTTGC	3	75	0
GAGGAAGACCGGGCACTCGAAGCTGCACCTACCGCATCT	3	30	0
CGGGGCGCCAGTGTAACTGTGGTGGCGCCCAGCGACCTG	7	40	1
TAACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC   	2	42	1
TCAGGCTACTGTGATAGAGCATGTGGGCTAAAATC    	0	6	0
CTGGAAGTAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGT	7	136	0
CCTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGT	10	85	0
CTTAGCCAGGTTCCTCGGCTTGTCGGGGTCGTAGCCCCT	7	202	0
TGCCCTCTGGTGTATCGAGCTGCAGGTCGCTGGGCGCCA	7	62	0
GCTCGATACACCAGAGGGCATCGAGGTCCTCAAAATGCC	7	81	1
          ***   * *  *  ** **
MAP Score: 19.2959

Motif 7
TGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAA	7	14	1
AAAAGCACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGATTC	10	53	1
GGAAGTAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGTCTCAC	7	131	0
CCCTCGCCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGTAGG	7	164	0
TCCTCGGCTTGTCGGGGTCGTAGCCCCTCGCCACCGCCAGGT	7	188	0
CCTGCAGCTCGATACACCAGAGGGCATCGAGGTCCTCAAAAT	7	75	1
CTACACTGGTGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAA	10	27	0
        GGCCTAGACTTGAAGCCCCAGTCGAACGGTGGAT	8	2	1
TCCTCCACACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCG	3	64	1
         CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT  	9	1	1
TGCTACGAGCGAGGTCCTCCTAGCCAAAGAGCG         	1	1	0
AACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC       	2	43	1
CCTCCAGCCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGG	7	266	1
GGTCTGTGCACTCAGATTCGCAGCCAGCCCGCCCAGCGATTG	10	76	1
TCCTCAAAATGCCCCCCACAGGGGGTGAGACGCTGCTCGACC	7	107	1
AGCGGACGAAGATCGTTCCACAGCGAAAGGGGATTTAGATAG	6	39	0
ACCCCGACAAGCCGAGGAACCTGGCTAAGACGGTCACAGTAG	7	212	1
GTGTATCGAGCTGCAGGTCGCTGGGCGCCACCACAGTTACAC	7	50	0
ATATTGTCAGGCTACTGTGATAGAGCATGTGGGCTAAAATC 	0	9	0
        AAGTTTTATATATAGCCTAGGAAGTTAAGAGTTA	6	80	0
          *     *  * ****   * **
MAP Score: 18.4043

Motif 8
GGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGG	7	182	0
      AACACCCCCGCCCCCGGCTACTCCTAGG	9	13	0
GCTTCGAGTGCCCGGTCTTCCTCCACACGGCAAA	3	46	1
ACTTCCAGCTCCTAGCCTACCACCTGGCGGTGGC	7	167	1
TAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAA	7	251	1
CACTCAGATTCGCAGCCAGCCCGCCCAGCGATTG	10	84	1
CCCGCCGTACGCCGGGCCGCCCCACAGGTTTGCC	3	74	0
TTTTTTACCGCCCGCTCGGCATCCACAAAAGCAC	10	27	1
CTGTGGTGGCGCCCAGCGACCTGCAGCTCGATAC	7	56	1
GTCTATTTAGCCTCGCCTTCCACACTCTCTTAAC	2	12	1
    GCTGTAGACACCCTCCCCCAAAACCCAAGC	2	48	0
GCCTCCAAACCGCTCCATCCCCCCTTATCCCGGT	7	275	0
GACCCCTACTCCCTAACCCCCTACTTCCAGCTCC	7	145	1
ACCACAGTTACACTGGCGCCCCGGGCCTTCATCT	7	29	0
GGGCTACGACCCCGACAAGCCGAGGAACCTGGCT	7	204	1
          *** ***  ** **
MAP Score: 17.6078

Motif 9
        CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT   	9	2	1
CTCTTAACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC  	2	38	1
CCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGTAGGGGGTTA	7	158	0
AACCCAAGCTGGTTAAGAGAGTGTGGAAGGCGAGGCTAAATA	2	15	0
GCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTACTCCCT	7	117	1
GGCCCGGGGCGCCAGTGTAACTGTGGTGGCGCCCAGCGACCT	7	36	1
CCTACCACCTGGCGGTGGCGAGGGGCTACGACCCCGACAAGC	7	182	1
TATGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGT	7	12	1
CGGCATTTAGGTCATTGGATCGGAGCTAGAACTTAAGGTGTT	4	96	1
ATATTGTCAGGCTACTGTGATAGAGCATGTGGGCTAAAATC 	0	9	0
TGCCCTCTGGTGTATCGAGCTGCAGGTCGCTGGGCGCCACCA	7	59	0
CCCCCCTCCAGCCACCGGGATAAGGGGGGATGGAGCGGTTTG	7	262	1
TGGTGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAACTTCTT	10	21	0
TCCTCCACACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCG	3	64	1
GGTTTGCCGTGTGGAGGAAGACCGGGCACTCGAAGCTGCACC	3	40	0
CACCCCCTGTGGGGGGCATTTTGAGGACCTCGATGCCCTCTG	7	92	0
        CGCTCTTTGGCTAGGAGGACCTCGCTCGTAGCAT	1	2	1
TAGCCTAGGAAGTTAAGAGTTAGCGGACGAAGATCGTTCCAC	6	60	0
TGACCGTCTTAGCCAGGTTCCTCGGCTTGTCGGGGTCGTAGC	7	206	0
GAGCAGCTGAGGTGTATAAGATGCGGTAGGTGCAGCTTCGAG	3	12	1
GCCTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGTGC	10	83	0
TAACGTTTGTGCTACTGCTAGCATGGACGCTATTTATTGTTG	4	237	1
     TATCCACCGTTCGACTGGGGCTTCAAGTCTAGGCC  	8	8	0
GATTGATAAGGCCTAATCTATAAGGGTAGTCGCTTATACCTG	10	113	1
AATATGACTATGCATAGGTTAGAGGCTAGATAAGCTAGAGTA	5	32	1
          ***   *    ** **  *  *
MAP Score: 16.9614

Motif 10
GTCTATTTAGCCTCGCCTTCCACACTCTCTTAACCAG	2	12	1
  GCTGTAGACACCCTCCCCCAAAACCCAAGCTGGTT	2	43	0
GGCACTCGAAGCTGCACCTACCGCATCTTATACACCT	3	21	0
TCGAGTGCCCGGTCTTCCTCCACACGGCAAACCTGTG	3	49	1
CCCGCCGTACGCCGGGCCGCCCCACAGGTTTGCCGTG	3	71	0
AGATCATAAGCTTCTACCTGCATTCGGCATTTAGGTC	4	72	1
AACACCTTAAGTTCTAGCTCCGATCCAATGACCTAAA	4	101	0
         GCATCATGCCACCAAAAAGATATATAGG	4	282	0
ACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATACAC	7	55	1
TCGAGGTCCTCAAAATGCCCCCCACAGGGGGTGAGAC	7	101	1
GGGTGAGACGCTGCTCGACCCCTACTCCCTAACCCCC	7	129	1
CCCCCTACTTCCAGCTCCTAGCCTACCACCTGGCGGT	7	161	1
GGGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCT	7	180	0
TGGCGAGGGGCTACGACCCCGACAAGCCGAGGAACCT	7	197	1
GTAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGG	7	250	1
CTCCAAACCGCTCCATCCCCCCTTATCCCGGTGGCTG	7	270	0
  GGCCTAGACTTGAAGCCCCAGTCGAACGGTGGATA	8	8	1
    AACACCCCCGCCCCCGGCTACTCCTAGGCTG  	9	8	0
AGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACC	10	25	1
TGAGTGCACAGACCCTGCTGCCTACACTGGTGCTTTT	10	53	0
CTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAAG	10	86	1
          *  *  ******  * *
MAP Score: 16.5819

Motif 11
GTCTATTTAGCCTCGCCTTCCACACTCTCTTAACCAGCT	2	12	1
CTGTAGACACCCTCCCCCAAAACCCAAGCTGGTTAAGAG	2	38	0
GCAGCTTCGAGTGCCCGGTCTTCCTCCACACGGCAAACC	3	43	1
GTTACACTGGCGCCCCGGGCCTTCATCTCTATCGCGTTA	7	18	0
TAACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATACAC	7	53	1
AGACGCTGCTCGACCCCTACTCCCTAACCCCCTACTTCC	7	134	1
ACTTCCAGCTCCTAGCCTACCACCTGGCGGTGGCGAGGG	7	167	1
TGGCGGTGGCGAGGGGCTACGACCCCGACAAGCCGAGGA	7	191	1
CTGTGACCGTCTTAGCCAGGTTCCTCGGCTTGTCGGGGT	7	212	0
GTAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGGGG	7	250	1
GCCTCCAAACCGCTCCATCCCCCCTTATCCCGGTGGCTG	7	270	0
      AACACCCCCGCCCCCGGCTACTCCTAGGCTG  	9	8	0
AAGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACCA	10	24	1
TCTGAGTGCACAGACCCTGCTGCCTACACTGGTGCTTTT	10	53	0
TGTGCACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGA	10	80	1
          *   ***  *  *** * *
MAP Score: 15.7927

Motif 12
      CGCTCTTTGGCTAGGAGGACCTCGCTCGTAGCA	1	4	1
ACCCAAGCTGGTTAAGAGAGTGTGGAAGGCGAGGCTAAA	2	17	0
CTCTTAACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAG	2	38	1
TCCTCCACACGGCAAACCTGTGGGGCGGCCCGGCGTACG	3	64	1
TGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAGTG	7	14	1
CCTGCAGCTCGATACACCAGAGGGCATCGAGGTCCTCAA	7	75	1
GGAAGTAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGTCT	7	134	0
CCTAGCCTACCACCTGGCGGTGGCGAGGGGCTACGACCC	7	177	1
TAGCCAGGTTCCTCGGCTTGTCGGGGTCGTAGCCCCTCG	7	200	0
CCCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTCTAC	7	250	0
CAGCCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGGC	7	270	1
        GGCCTAGACTTGAAGCCCCAGTCGAACGGTG	8	2	1
      CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT  	9	4	1
AAAAGCACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGA	10	53	1
CCTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGT	10	85	0
          *   ***  * ****   *
MAP Score: 8.47963

Motif 13
TTACATGCTACGAGCGAGGTCCTCCTAGCCAAAGAGCG	1	10	0
AGTCTATTTAGCCTCGCCTTCCACACTCTCTTAACCAG	2	11	1
ACTCGAAGCTGCACCTACCGCATCTTATACACCTCAGC	3	17	0
GGTAGGTGCAGCTTCGAGTGCCCGGTCTTCCTCCACAC	3	36	1
CGTACGCCGGGCCGCCCCACAGGTTTGCCGTGTGGAGG	3	65	0
CGCTGTGGAACGATCTTCGTCCGCTAACTCTTAACTTC	6	56	1
AGTTACACTGGCGCCCCGGGCCTTCATCTCTATCGCGT	7	20	0
AGGTCGCTGGGCGCCACCACAGTTACACTGGCGCCCCG	7	40	0
ACACCAGAGGGCATCGAGGTCCTCAAAATGCCCCCCAC	7	88	1
GGGGTGAGACGCTGCTCGACCCCTACTCCCTAACCCCC	7	128	1
TACTCCCTAACCCCCTACTTCCAGCTCCTAGCCTACCA	7	151	1
GGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCTAG	7	178	0
GTGGCGAGGGGCTACGACCCCGACAAGCCGAGGAACCT	7	196	1
AGTAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGG	7	249	1
 GGCCTCCAAACCGCTCCATCCCCCCTTATCCCGGTGG	7	273	0
   AACACCCCCGCCCCCGGCTACTCCTAGGCTG    	9	6	0
GAAGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCAC	10	23	1
ACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAAG	10	85	1
          **  * ** *** *   *
MAP Score: 8.03587

Motif 14
ACATGCTACGAGCGAGGTCCTCCTAGCCAAAGAGCG         	1	1	0
CCTTCCACACTCTCTTAACCAGCTTGGGTTTTGGGGGAGGGTGTC	2	27	1
ACAGGTTTGCCGTGTGGAGGAAGACCGGGCACTCGAAGCTGCACC	3	40	0
ACACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCGGGCCC    	3	70	1
AGATCATAAGCTTCTACCTGCATTCGGCATTTAGGTCATTGGATC	4	72	1
TTATGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAA	7	11	1
CGACCTGCAGCTCGATACACCAGAGGGCATCGAGGTCCTCAAAAT	7	72	1
CCTCAAAATGCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTA	7	108	1
GGTGGTAGGCTAGGAGCTGGAAGTAGGGGGTTAGGGAGTAGGGGT	7	146	0
AGCTCCTAGCCTACCACCTGGCGGTGGCGAGGGGCTACGACCCCG	7	173	1
ACGACCCCGACAAGCCGAGGAACCTGGCTAAGACGGTCACAGTAG	7	209	1
AGTAAAGGCCCCCCTCCAGCCACCGGGATAAGGGGGGATGGAGCG	7	254	1
         CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT     	9	1	1
CACAAAAGCACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGATTC	10	50	1
GATTAGGCCTTATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAG	10	86	0
          *  *     *  *  ***   * **
MAP Score: 7.68203

Motif 15
CGGTCTTCCTCCACACGGCAAACCTGTGGGGCGGCCCG	3	58	1
ACCTGTGGGGCGGCCCGGCGTACGGCGGGCCC      	3	79	1
          GGGCCCGCCGTACGCCGGGCCGCCCCAC	3	83	0
ATAGAGATGAAGGCCCGGGGCGCCAGTGTAACTGTGGT	7	25	1
AACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATACAC	7	54	1
CCTCAAAATGCCCCCCACAGGGGGTGAGACGCTGCTCG	7	108	1
TCCTAGCCTACCACCTGGCGGTGGCGAGGGGCTACGAC	7	176	1
GGGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCTA	7	179	0
GGCTACGACCCCGACAAGCCGAGGAACCTGGCTAAGAC	7	205	1
AGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGGGGG	7	252	1
 AACACCCCCGCCCCCGGCTACTCCTAGGCTG      	9	4	0
TTTTTACCGCCCGCTCGGCATCCACAAAAGCACCAGTG	10	28	1
CGCAGCCAGCCCGCCCAGCGATTGATAAGGCCTAATCT	10	94	1
          *********        *
MAP Score: 7.35799

Motif 16
TCTTTGGCTAGGAGGACCTCGCTCGTAGCATGTAAGAAC	1	13	1
   GCTGTAGACACCCTCCCCCAAAACCCAAGCTGGTTA	2	42	0
AGATGCGGTAGGTGCAGCTTCGAGTGCCCGGTCTTCCTC	3	30	1
GCAAACCTGTGGGGCGGCCCGGCGTACGGCGGGCCC   	3	75	1
GAGATCATAAGCTTCTACCTGCATTCGGCATTTAGGTCA	4	71	1
TAACGTTTGTGCTACTGCTAGCATGGACGCTATTTATTG	4	237	1
TGTAACTGTGGTGGCGCCCAGCGACCTGCAGCTCGATAC	7	51	1
GCGACCTGCAGCTCGATACACCAGAGGGCATCGAGGTCC	7	71	1
GGTCGAGCAGCGTCTCACCCCCTGTGGGGGGCATTTTGA	7	110	0
GGGTGAGACGCTGCTCGACCCCTACTCCCTAACCCCCTA	7	129	1
TCCCTAACCCCCTACTTCCAGCTCCTAGCCTACCACCTG	7	154	1
GGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCTAGGA	7	176	0
GTGGCGAGGGGCTACGACCCCGACAAGCCGAGGAACCTG	7	196	1
TCACAGTAGAGTAAAGGCCCCCCTCCAGCCACCGGGATA	7	245	1
CCTCCAAACCGCTCCATCCCCCCTTATCCCGGTGGCTGG	7	269	0
     AACACCCCCGCCCCCGGCTACTCCTAGGCTG   	9	7	0
AAGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACCA	10	24	1
ACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAAGG	10	85	1
          **  *  *****     **
MAP Score: 6.34966

Motif 17
  GATTTTAGCCCACATGCTCTATCACAGTAGCCTGACAATATATATA	0	8	1
   AAGTCTATTTAGCCTCGCCTTCCACACTCTCTTAACCAGCTTGGG	2	7	1
        GCTGTAGACACCCTCCCCCAAAACCCAAGCTGGTTAAGAG	2	38	0
CACTCGAAGCTGCACCTACCGCATCTTATACACCTCAGCTGCTCTA  	3	8	0
TAGGTGCAGCTTCGAGTGCCCGGTCTTCCTCCACACGGCAAACCTGTG	3	38	1
TGGAACGATCTTCGTCCGCTAACTCTTAACTTCCTAGGCTATATATAA	6	61	1
GGTCGCTGGGCGCCACCACAGTTACACTGGCGCCCCGGGCCTTCATCT	7	29	0
CGAGCAGCGTCTCACCCCCTGTGGGGGGCATTTTGAGGACCTCGATGC	7	98	0
GCTGCTCGACCCCTACTCCCTAACCCCCTACTTCCAGCTCCTAGCCTA	7	138	1
GGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGT	7	167	0
GGCGAGGGGCTACGACCCCGACAAGCCGAGGAACCTGGCTAAGACGGT	7	198	1
AGAGTAAAGGCCCCCCTCCAGCCACCGGGATAAGGGGGGATGGAGCGG	7	252	1
          AACACCCCCGCCCCCGGCTACTCCTAGGCTG       	9	3	0
TGAAGAAGTTTTTTACCGCCCGCTCGGCATCCACAAAAGCACCAGTGT	10	19	1
CAGCAGGGTCTGTGCACTCAGATTCGCAGCCAGCCCGCCCAGCGATTG	10	70	1
          * *  ** * *   *        *  **
MAP Score: 6.09237

Motif 18
ATATATATTGTCAGGCTACTGTGATAGAGCATGT	0	21	0
ATGCGGTAGGTGCAGCTTCGAGTGCCCGGTCTTC	3	32	1
CACCTTAAGTTCTAGCTCCGATCCAATGACCTAA	4	102	0
TAGCCTTAATTAGATCTTCTAGGAATAAACCTAA	4	203	1
CTCTAGCTTATCTAGCCTCTAACCTATGCATAGT	5	38	0
ATAGAAAGTTTATATCTGCTATGCATCATTAGC 	6	9	0
GCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAA	7	22	1
CTCTGGTGTATCGAGCTGCAGGTCGCTGGGCGCC	7	63	0
ACCCCCTACTTCCAGCTCCTAGCCTACCACCTGG	7	160	1
AAGGCCCCCCTCCAGCCACCGGGATAAGGGGGGA	7	258	1
ACCGTTCGACTGGGGCTTCAAGTCTAGGCC    	8	6	0
          ** **** * ** *
MAP Score: 5.03424

Motif 19
  CGCTCTTTGGCTAGGAGGACCTCGCTCGTAGCATGTA	1	8	1
          GCTGTAGACACCCTCCCCCAAAACCCAAG	2	49	0
GATGCGGTAGGTGCAGCTTCGAGTGCCCGGTCTTCCTCC	3	31	1
CCTCCACACGGCAAACCTGTGGGGCGGCCCGGCGTACGG	3	65	1
TATGGGTAACGCGATAGAGATGAAGGCCCGGGGCGCCAG	7	12	1
CGGGGCGCCAGTGTAACTGTGGTGGCGCCCAGCGACCTG	7	40	1
AGAGGGCATCGAGGTCCTCAAAATGCCCCCCACAGGGGG	7	93	1
GAGTAGGGGTCGAGCAGCGTCTCACCCCCTGTGGGGGGC	7	117	0
CGCTGCTCGACCCCTACTCCCTAACCCCCTACTTCCAGC	7	137	1
TGTCGGGGTCGTAGCCCCTCGCCACCGCCAGGTGGTAGG	7	182	0
    GGCCTCCAAACCGCTCCATCCCCCCTTATCCCGGT	7	275	0
          GGCCTAGACTTGAAGCCCCAGTCGAACGG	8	0	1
AGAGCCTCGTGAAGAAGTTTTTTACCGCCCGCTCGGCAT	10	10	1
TGTGCACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGA	10	80	1
          *    ****     *****
MAP Score: 4.20057

Motif 20
AACCCAAGCTGGTTAAGAGAGTGTGGAAGGCGAGGC	2	21	0
TAACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAGC	2	42	1
AGATGCGGTAGGTGCAGCTTCGAGTGCCCGGTCTTC	3	30	1
TCCACACGGCAAACCTGTGGGGCGGCCCGGCGTACG	3	67	1
GGGGCGGCCCGGCGTACGGCGGGCCC          	3	85	1
ACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAA	7	20	1
CAGTGTAACTGTGGTGGCGCCCAGCGACCTGCAGCT	7	48	1
GCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTA	7	117	1
TGGAAGTAGGGGGTTAGGGAGTAGGGGTCGAGCAGC	7	138	0
AGCCTACCACCTGGCGGTGGCGAGGGGCTACGACCC	7	180	1
CCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTCT	7	252	0
CCAGCCACCGGGATAAGGGGGGATGGAGCGGTTTGG	7	269	1
   CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT  	9	7	1
TGCTTTTGTGGATGCCGAGCGGGCGGTAAAAAACTT	10	24	0
CAAAAGCACCAGTGTAGGCAGCAGGGTCTGTGCACT	10	52	1
ATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGTG	10	84	0
          ** *  * * ** ***
MAP Score: 4.06338

Motif 21
GTTAAGAGAGTGTGGAAGGCGAGGCTAAATAGAC	2	12	0
AACCAGCTTGGGTTTTGGGGGAGGGTGTCTACAG	2	43	1
CTGAGGTGTATAAGATGCGGTAGGTGCAGCTTCG	3	18	1
TTTGCCGTGTGGAGGAAGACCGGGCACTCGAAGC	3	46	0
ACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCG	3	72	1
          GGGCCCGCCGTACGCCGGGCCGCC	3	87	0
ACTATGCATAGGTTAGAGGCTAGATAAGCTAGAG	5	38	1
AGGAAGTTAAGAGTTAGCGGACGAAGATCGTTCC	6	62	0
ACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGT	7	20	1
GTGTAACTGTGGTGGCGCCCAGCGACCTGCAGCT	7	50	1
CCCCACAGGGGGTGAGACGCTGCTCGACCCCTAC	7	120	1
TAGGGGGTTAGGGAGTAGGGGTCGAGCAGCGTCT	7	134	0
GCCACCGCCAGGTGGTAGGCTAGGAGCTGGAAGT	7	167	0
CCTACCACCTGGCGGTGGCGAGGGGCTACGACCC	7	182	1
CCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTC	7	253	0
TCCAGCCACCGGGATAAGGGGGGATGGAGCGGTT	7	268	1
   CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT	9	7	1
CTTTTGTGGATGCCGAGCGGGCGGTAAAAAACTT	10	24	0
CACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGA	10	58	1
          ** *  **** ***
MAP Score: 3.75974

Motif 22
GCTGGTTAAGAGAGTGTGGAAGGCGAGGCTAAATAGACT	2	11	0
GCTTGGGTTTTGGGGGAGGGTGTCTACAGC         	2	48	1
AAGATGCGGTAGGTGCAGCTTCGAGTGCCCGGTCTTCCT	3	29	1
CACACGGCAAACCTGTGGGGCGGCCCGGCGTACGGCGGG	3	69	1
AACGCGATAGAGATGAAGGCCCGGGGCGCCAGTGTAACT	7	19	1
TGGTGTATCGAGCTGCAGGTCGCTGGGCGCCACCACAGT	7	55	0
AGCTCGATACACCAGAGGGCATCGAGGTCCTCAAAATGC	7	80	1
TGCCCCCCACAGGGGGTGAGACGCTGCTCGACCCCTACT	7	116	1
GTGGTAGGCTAGGAGCTGGAAGTAGGGGGTTAGGGAGTA	7	151	0
CTAGCCTACCACCTGGCGGTGGCGAGGGGCTACGACCCC	7	178	1
TCCCGGTGGCTGGAGGGGGGCCTTTACTCTACTGTGACC	7	243	0
AGCCACCGGGATAAGGGGGGATGGAGCGGTTTGGAGGCC	7	271	1
    CAGCCTAGGAGTAGCCGGGGGCGGGGGTGTT    	9	6	1
CACCAGTGTAGGCAGCAGGGTCTGTGCACTCAGATTCGC	10	58	1
GTGCACTCAGATTCGCAGCCAGCCCGCCCAGCGATTGAT	10	81	1
          **  *  **  **  ** *
MAP Score: 3.50192

Motif 23
TTCGAGTGCCCGGTCTTCCTCCACACGGCAAACCTGTG	3	48	1
      GGGCCCGCCGTACGCCGGGCCGCCCCACAGGT	3	79	0
GAGATCATAAGCTTCTACCTGCATTCGGCATTTAGGTC	4	71	1
GTGGTGGCGCCCAGCGACCTGCAGCTCGATACACCAGA	7	58	1
CGAGCAGCGTCTCACCCCCTGTGGGGGGCATTTTGAGG	7	108	0
CTGCTCGACCCCTACTCCCTAACCCCCTACTTCCAGCT	7	139	1
CAGCTCCTAGCCTACCACCTGGCGGTGGCGAGGGGCTA	7	172	1
CCCCCCTTATCCCGGTGGCTGGAGGGGGGCCTTTACTC	7	253	0
      AACACCCCCGCCCCCGGCTACTCCTAGGCTG 	9	9	0
GTGCACAGACCCTGCTGCCTACACTGGTGCTTTTGTGG	10	49	0
CTCAGATTCGCAGCCAGCCCGCCCAGCGATTGATAAGG	10	86	1
          **  *  ****  *  **
MAP Score: 2.82057

Motif 24
GATTTTAGCCCACATGCTCTATCACAGTAGCCTGACA	0	10	1
CCTCGCCTTCCACACTCTCTTAACCAGCTTGGGTTTT	2	22	1
        GCTGTAGACACCCTCCCCCAAAACCCAAG	2	49	0
CCTACCGCATCTTATACACCTCAGCTGCTCTA     	3	5	0
  ACCCTTCGCGTATACGCTTACGTAGAGTATCTCAA	4	8	1
ACTTTCTATCTAAATCCCCTTTCGCTGTGGAACGATC	6	34	1
GGCGCCACCACAGTTACACTGGCGCCCCGGGCCTTCA	7	32	0
AGGGGTCGAGCAGCGTCTCACCCCCTGTGGGGGGCAT	7	115	0
CTGCTCGACCCCTACTCCCTAACCCCCTACTTCCAGC	7	139	1
TTGTCGGGGTCGTAGCCCCTCGCCACCGCCAGGTGGT	7	185	0
CACAGTAGAGTAAAGGCCCCCCTCCAGCCACCGGGAT	7	246	1
CAAACCGCTCCATCCCCCCTTATCCCGGTGGCTGGAG	7	267	0
TCGGCATCCACAAAAGCACCAGTGTAGGCAGCAGGGT	10	42	1
          *  *  * **  *****
MAP Score: 2.26063

Motif 25
TGGCTAGGAGGACCTCGCTCGTAGCATGTAAGAAC	1	17	1
TCGAGTGCCCGGTCTTCCTCCACACGGCAAACCTG	3	49	1
  GGGCCCGCCGTACGCCGGGCCGCCCCACAGGTT	3	78	0
TAATAACGTTTGTGCTACTGCTAGCATGGACGCTA	4	234	1
CACAGTTACACTGGCGCCCCGGGCCTTCATCTCTA	7	26	0
CAGTGTAACTGTGGTGGCGCCCAGCGACCTGCAGC	7	48	1
GGGGGCATTTTGAGGACCTCGATGCCCTCTGGTGT	7	88	0
TCGAGGTCCTCAAAATGCCCCCCACAGGGGGTGAG	7	101	1
CAGGGGGTGAGACGCTGCTCGACCCCTACTCCCTA	7	125	1
CGACCCCTACTCCCTAACCCCCTACTTCCAGCTCC	7	144	1
TGTCGGGGTCGTAGCCCCTCGCCACCGCCAGGTGG	7	186	0
GTAGAGTAAAGGCCCCCCTCCAGCCACCGGGATAA	7	250	1
    GGCCTCCAAACCGCTCCATCCCCCCTTATCC	7	279	0
  GGCCTAGACTTGAAGCCCCAGTCGAACGGTGGA	8	8	1
    AACACCCCCGCCCCCGGCTACTCCTAGGCTG	9	10	0
TGAGTGCACAGACCCTGCTGCCTACACTGGTGCTT	10	55	0
ATCAATCGCTGGGCGGGCTGGCTGCGAATCTGAGT	10	85	0
          *  ** ******  *
MAP Score: 0.671795