AlignACE 3.0 10/20/99 AlignACE2 -i CP/CP_operons001_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944237028 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 sodM 184 Superoxide Dismutase (Mn) #1 accD 81 AcCoA Carboxylase/Transferase Beta #2 dut 50 dUTP Nucleotidohydrolase #3 infA 294 Initiation Factor IF-1 #4 tufA 196 Elongation Factor Tu #5 secE 143 preprotein translocase #6 rl11 106 L11 Ribosomal Protein #7 rl1 26 L1 Ribosomal Protein #8 rl7 43 L7/L12 Ribosomal Protein #9 rpoB 136 RNA Polymerase Beta #10 rpoC 23 RNA Polymerase Beta' #11 adk 300 Adenylate Kinase #12 rs1 300 S1 Ribosomal Protein #13 nusA 100 N Utilization Protein A #14 truB 45 tRNA Pseudouridine Synthase #15 lepA 260 GTPase #16 fusA 33 Elongation Factor G #17 rs7 47 S7 Ribosomal Protein #18 rs12 221 S12 Ribosomal Protein #19 yaeI 247 phosphohydrolase #20 rs11 21 S11 Ribosomal Protein #21 rs13 55 S13 Ribosomal Protein #22 secY 24 Translocase #23 rl6 26 L6 Ribosomal Protein #24 rl14 22 L14 Ribosomal Protein #25 rl16 28 L16 Ribosomal Protein #26 rl2 21 L2 Ribosomal Protein #27 rl4 32 L4 Ribosomal Protein #28 rl3 270 L3 Ribosomal Protein #29 rs4 216 S4 Ribosomal Protein #30 rl36 244 L36 Ribosomal Protein #31 rs14 22 S14 Ribosomal Protein #32 pnp 40 Polyribonucleotide Nucleotidyltransferase #33 rs15 247 S15 Ribosomal Protein #34 CPn1010 226 CT852 hypothetical protein Motif 1 AAGGAGGTTAAATACTAAAAAGGTATGTTG 0 162 1 CGATAGTGAAAAAAATAAAACAATAAGCAG 3 11 1 CCTCTGTTTACAAAGAAAAAGTCCTTATTT 3 48 0 GTTATTTAGAAAAAGTCAAATCCCTTTCAC 3 142 0 CTTCTAGATTAAAAATTAAATCTACGGGTG 5 116 0 TAAGAAACGAAAAACTAAAATTATAAGAAG 6 43 0 AGAATTAAAATTAAAACTCTCAAAAT 8 6 1 TTTGTAGAAAAGAAAAATCGAAAGATT 9 7 1 AAAGAAAAAGAAAAGAAAAATCTTTCGATT 9 25 0 TTTATACATGAAAAGAAAAAGAAAAGAAAA 9 36 0 AAAAATAAAGTTATATTCTT 11 0 1 TGAACGGGGAAATAGTAAAGAATATAACTT 11 17 0 CAAGAAAATTAAAAGAAAAGAGGTCTCTTT 11 51 0 GGTAATATAGAAAAGTTAAAAAAGAGGCCT 12 131 1 CTAAAAACTACAAAGTCAAAAAAGACAGTG 12 266 0 ATTTCTTTTAAAAAGTAAAAAAACGGTTCG 18 64 1 CTCTTTTCTTAATAGAAAAAACTCCATTTT 19 115 0 ACTAAGAACTCAAAGATAAAAGATTCTTGG 28 92 0 GAATTCTCTAAAAAGAAAAGGAAATTTTCC 28 189 0 AGAGAATTCGATAAGTAAAATACTAAGCAG 28 210 1 GGAGTAAAATAAAAATAAAACGCACACTCA 29 99 0 ATGAGTTCTAAAAACAAAAAAAATAACAAT 33 60 1 TTTCTATAAACAAAGAAAAAATTAGGGGCT 33 139 0 ********** MAP Score: 18.5337 Motif 2 GATACAACAATGGCCTTGAAAGAAGGCCTTATTCT 0 70 0 GGGTAGATTCAGCCCTAAAAATAGAACGGTGCTCT 3 211 0 GCACTGAGACACCTCTACAAACAGAGGGTAAGAAA 6 66 0 TTAAAATTAAAACTCTCAAAATAAGTAAGGGTGAC 8 14 1 GTATTTTATAAAATCTGGTAATATAGAAAAGTTAA 12 115 1 GTGTAAATATAAACCTTAAAAAAGGCAAGACCTCC 12 234 0 TACGAAATTCTTCTCTCCAAAGAGATAGGTTAGAA 18 10 1 TACAGCTAAAATTTCTTTTAAAAAGTAAAAAAACG 18 54 1 AAAAAACGGTTCGTCTAGAAAAAGATAGCATTTTT 18 81 1 CGTTCCCTCTTCATCTGAAAATAAGCCCTTGCCAA 18 134 1 AAATGGAGTTTTTTCTATTAAGAAAAGAGGAATAC 19 116 1 GCGACTTTCTATTTCTATAAATAGGAATTTTCCAA 28 61 1 TTACTTATCGAATTCTCTAAAAAGAAAAGGAAATT 28 193 0 TATTACCTTCACTTCTCATAAAAAGGAGAAGCATA 30 215 0 TTCCATTATGAGTTCTAAAAACAAAAAAAATAACA 33 53 1 TAAGACTTTTTTTTCTATAAACAAAGAAAAAATTA 33 145 0 AACTTATTCTATAAAAATGCTTGTTGTAA 34 207 0 * *** *** *** MAP Score: 14.7765 Motif 3 AAATAATTGCATTGTAGAAAATTGCCATTAG 29 35 1 TTTCCTTTTCTTTTTAGAGAATTCGATAAGT 28 195 1 TTTGTAGAAAAGAAAAATCGA 9 0 1 AAAATCTGGTAATATAGAAAAGTTAAAAAAG 12 124 1 TTTTTCTTTGTTTATAGAAAAAAAAGTCTTA 33 149 1 AAATACTGTAAATATAGAAAAACAAGAAAAT 11 72 0 TGCCTTGTCATATGTAGAGAAACAGGATTTG 12 63 0 GATTAATTCGATTATATAGAACTAATCGTCT 12 195 1 AGTGCTTTGCATTCTAGGAAAAGTCTCTCTG 11 195 1 ACGTAGGCTTAATTTAGGGAAATTTTGTCGC 9 92 1 TTATATTTGTTATTTAGAAAAAGTCAAATCC 3 149 0 AACTTATTCTATAAAAATGCTTGTTG 34 210 0 TACCACACGTATTTTATAAAATCTGGTAATA 12 107 1 CTTCCAAAAAATTTTTTAGAAGCGACTTCTT 28 31 0 AATAAATAATATTATTTAGAATTGGGTGGAG 33 24 0 TTAAGGACGTATTATTTAGAACTAAATAATA 13 38 0 AAGATAAAAGATTCTTGGAAAATTCCTATTT 28 79 0 TAAACTATATTTTTTGGGAACTTGAATACT 14 9 1 GGAAAATTCCTATTTATAGAAATAGAAAGTC 28 63 0 ATATTTACAGTATTTTGAAAAGATATATAGT 11 88 1 TTTTATCTTTATTTTAAAGAAGTCGCTTCTA 28 15 1 ACTCTAACATAATCTTGGAAATAATTGCATT 29 17 1 ATCCTGCTTGAATTTAAAAAAATGCTATCTT 18 102 0 *** ******* MAP Score: 14.0801 Motif 4 AAGAAGGCCTTATTCTGAAGGAGATTTAGCCCAA 0 52 0 ATTCGCAAGGTTTTGTGAAAGGGATTTGACTTTT 3 128 1 GCTTAAAAGATTTTGTTAAGGATAATTGATCA 3 272 1 TCTTACCCTCTGTTTGTAGAGGTGTCTCAGTGCA 6 68 1 TTTGTAGAAAAGAAAAATCGAAAGA 9 1 1 AGCCTACGTATGCTTCTAAAGGGAGCATTCGGTT 9 67 0 AGATATATAGTAGTCCTAGGGAAAATCTTGGGAC 11 108 1 TAAGTTTCCCTGATTTTAGGGGTAATGGTGACGT 11 256 1 ACTAATCGTCTCCTGCAAGGGAGGTCTTGCCTTT 12 215 1 ATGATCATTTTGCTAATAAAGAGATGCAGTCCGC 15 142 1 CTAACCTATCTCTTTGGAGAGAAGAATTTCGTA 18 9 0 ATGCTTATACTATTTTAAGGGAGGCCCAACGT 21 33 1 TTTATTAGAGAGATAAACAGC 26 1 1 AGTTTTATCTTTATTTTAAAGAAGTCGCTTCTAA 28 13 1 AAGGGACAGGTTATCAGAGGGGGAAGATTTTTAC 28 143 0 TGTCCCTTTATTTTCTTAAGGGAAAATTTCCTTT 28 169 1 GTTTCTTTGTTCCTCCAAGAGGAAAGCAAATCAT 28 244 1 CACGGTTGAGTCTTACTAAAGAGGCTTTGCCCGA 30 39 1 CCTTCACTTCTCATAAAAAGGAGAAGCATACTAA 30 211 0 TCCTGTTAGATATTTGTAAAGGGAACGAAAAAA 32 9 0 TTTGCGGCAATTATTTTAAGGAGACATCCG 33 227 1 TCTTCAGATCTTCTGCAAAGGGAACAAAGTACTC 34 107 1 * * ******** MAP Score: 12.0937 Motif 5 TTATACATGAAAAGAAAAAGAAAAGAAAAATCTT 9 31 0 AATTTCTTTTAAAAAGTAAAAAAACGGTTCGTCT 18 63 1 GTGCGGAGTAAAATAAAAATAAAACGCACACTCA 29 99 0 TATGAGTTCTAAAAACAAAAAAAATAACAATATA 33 59 1 TTATATCAATAAAGATCAATAAGAAGACATCGGC 30 85 1 AAAAACAAGAAAATTAAAAGAAAAGAGGTCTCTT 11 52 0 TAAAAACTACAAAGTCAAAAAAGACAGTGTAAAT 12 261 0 GTAATATAGAAAAGTTAAAAAAGAGGCCTTATAC 12 132 1 CGAAAAACTAAAATTATAAGAAGATAAGGAATAA 6 32 0 GACTTCTTTAAAATAAAGATAAAACTAGC 28 5 0 TTTTTTCTATAAACAAAGAAAAAATTAGGGGCTG 33 138 0 TCGATAGTGAAAAAAATAAAACAATAAGCAGTAT 3 10 1 ACTTATTTTAAAACATCAATAGAAAATATAA 4 7 0 TAACAATATACAATATCAATAAAACGCTTTTATG 33 83 1 CAAGGAGGTTAAATACTAAAAAGGTATGTTGTT 0 161 1 TCGATAAGTAAAATACTAAGCAGATTTGTTTCTT 28 217 1 TACTGTAAATATAGAAAAACAAGAAAATTAAAAG 11 66 0 TTTGTAGAAAAGAAAAATCGAAAGATTTTTCT 9 8 1 *** * ** **** MAP Score: 12.0254 Motif 6 AAGGCCTTATTCTGAAGGAGATTTAGCCCAA 0 52 0 AATCAATAATTTTTAAGAGGATTTTGAG 4 178 1 TTTGTAGAAAAGAAAAATCGA 9 0 1 CCGAATGCTCCCTTTAGAAGCATACGTAGGC 9 69 1 AAAATGACGTTTTGGAGAAAATA 10 10 1 GGTGACGTCAATTTAAGGAGCATTCGAA 11 282 1 CAAGACCTCCCTTGCAGGAGACGATTAGTTC 12 213 0 GACTTTGTAGTTTTTAGGAGAATAACAATAA 12 279 1 CCGCAAAAGTATTTGAGAAGCTGGTCTTTGT 15 172 1 CTGGTCTTTGTCTGAAGGAGCCTTCTCAATG 15 192 1 AACCTATCTCTTTGGAGAGAAGAATTTCGTA 18 10 0 TCCAAAAAATTTTTTAGAAGCGACTTCTTTA 28 29 0 CCCTTTATTTTCTTAAGGGAAAATTTCCTTT 28 172 1 TTTCCTTTTCTTTTTAGAGAATTCGATAAGT 28 195 1 TTGCTTTCCTCTTGGAGGAACAAAGAAACAA 28 242 0 AAATAATTGCATTGTAGAAAATTGCCATTAG 29 35 1 TTTGCCCGAAATTTTAGAAGATTATATCAAT 30 64 1 GCGGCAATTATTTTAAGGAGACATCCG 33 230 1 TTGCAGAAGATCTGAAGAGAAAAGGTGGCTA 34 94 0 CTTTGTTCCCTTTGCAGAAGATCTGAAGAGA 34 105 0 **** ****** MAP Score: 11.9816 Motif 7 TCTGTTTACAAAGAAAAAGTCCTTATTTTAA 3 45 0 ATTTGTTATTTAGAAAAAGTCAAATCCCTTT 3 145 0 TTTGTAGAAAAGAAAAATCGAAAGATTTT 9 8 1 AAGAAAAAGAAAAGAAAAATCTTTCGATTTT 9 23 0 ATCAAAATAGCAGGAGAACTCGC 9 123 1 CGTTCAAGCCAAAGAGACCTCTTTTCTTTTA 11 41 1 ATAGTAGTCCTAGGGAAAATCTTGGGACTCA 11 114 1 CTTTGCATTCTAGGAAAAGTCTCTCTGTTTT 11 199 1 ACGTCAATTTAAGGAGCATTCGAA 11 286 1 TCTTTGTCTGAAGGAGCCTTCTCAATGCAGC 15 196 1 TCACCTATAATAGGAAAATTCTTGGGCCCCA 19 166 1 TAAAAGATTCTTGGAAAATTCCTATTTATAG 28 75 0 CCTTTTCTTTTTAGAGAATTCGATAAGTAAA 28 198 1 AAAGATCAATAAGAAGACATCGGCTTTCTTC 30 95 1 CCAACTTATCTAAGAAAATTCGAGAGATGAC 30 125 1 TTGTTTATAGAAAAAAAAGTCTTACCCTACC 33 156 1 CAATTATTTTAAGGAGACATCCG 33 234 1 ******** ** MAP Score: 11.329 Motif 8 CTTTAGGATATTCTCCAAGATGATTTTTCC 0 12 0 GGGATTTGACTTTTTCTAAATAACAAATAT 3 148 1 GACTAGGCGGTTTTTCAAGACCGGGAAGCA 4 47 1 CTCAAAATCCTCTTAAAAATTATTGAT 4 179 0 TTATTCCTTATCTTCTTATAATTTTAGTTT 6 32 1 TATTTTCTCCAAAACGTCATTTT 10 9 0 AATTTTCTTGTTTTTCTATATTTACAGTAT 11 71 1 ACAGAGAGACTTTTCCTAGAATGCAAAGCA 11 197 0 TTATTGTTATTCTCCTAAAAACTACAAAG 12 281 0 CAGCTAAAATTTCTTTTAAAAAGTAAAAAA 18 56 1 AAATGCTATCTTTTTCTAGACGAACCGTTT 18 84 0 AAAGATAGCATTTTTTTAAATTCAAGCAGG 18 101 1 TAGAAGCGACTTCTTTAAAATAAAGATAAA 28 16 0 TAAATAGGAATTTTCCAAGAATCTTTTATC 28 78 1 AATTTCCTTTTCTTTTTAGAGAATTCGATA 28 193 1 GTTTCTTTGTTCCTCCAAGAGGAAAGCAAA 28 244 1 AGTGTCTTCCTATAATTCCTTGCC 30 4 1 ATTGATATAATCTTCTAAAATTTCGGGCAA 30 65 0 ATCTCTCGAATTTTCTTAGATAAGTTGGAA 30 123 0 GTAAGACTTTTTTTTCTATAAACAAAGAAA 33 151 0 ********** MAP Score: 11.001 Motif 9 GTTAAATACTAAAAAGGTATGTTGTT 0 168 1 TTTACAAAGAAAAAGTCCTTATTTTAATATACTGC 3 37 0 AGAAAAATCGAAAGATTTTTCTTTTCTTTTTCTTT 9 20 1 AAAATGACGTTTTGGAGAAAATA 10 0 1 CGTTCAAGCCAAAGAGACCTCTTTTCTTTTAATTT 11 41 1 GCATTCTAGGAAAAGTCTCTCTGTTTTACCCCATG 11 203 1 GCTTATGAAAAAAACGATATGTTTTCTATGCGCCA 12 30 1 CCAGATTTTATAAAATACGTGTGGTAATTATCATA 12 98 0 TAAACTATATTTTTTGGGAACTTGA 14 0 1 TGAATTTAAAAAAATGCTATCTTTTTCTAGACGAA 18 90 0 TCTTTAATTTAAAATGGAGTTTTTTCTATTAAGAA 19 105 1 TATAAAACTATTTGTTGTCTAATTTCCG 19 229 0 ATCTTAGGTCAAAAATTGTTATTTT 21 0 0 TTCTTAAGGGAAAATTTCCTTTTCTTTTTAGAGAA 28 181 1 CATTAGAACTAAAATGCTCTTTGGTATTTTGTCAA 29 60 1 CTTATTCTATAAAAATGCTTGTTGTAATCCTGAGA 34 199 0 **** * * **** MAP Score: 10.188 Motif 10 TTTGACTTTGTAGTTTTTAGGAGAATAACAATAA 12 276 1 AAGAAGGCCTTATTCTGAAGGAGATTTAGCCCAAGTG 0 49 0 AGGCAAGACCTCCCTTGCAGGAGACGATTAGTTCTAT 12 210 0 TATAGTGCTTTGCATTCTAGGAAAAGTCTCTCTGTTT 11 192 1 AAAATTTCCTTTTCTTTTTAGAGAATTCGATAAGTAA 28 191 1 AATGGTGACGTCAATTTAAGGAGCATTCGAA 11 279 1 TTCTAACCTATCTCTTTGGAGAGAAGAATTTCGTA 18 8 0 AATCCTATACTTCCGTTCTAGAGATGTATAAGGCCTC 12 154 0 GTCCCTTTATTTTCTTAAGGGAAAATTTCCTTTTCTT 28 170 1 AGTATGCTTCTCCTTTTTATGAGAAGTGAAGGTAATA 30 213 1 ACTGATTTCCTTATTTACAAGAGGAGTATA 13 80 1 GATTAGTTAAATTACGGAGAAAATAACAAGTTC 16 6 1 AAAATGACGTTTTGGAGAAAATA 10 4 1 GGTGTGTAGCTTAGCTGGTAGAGCAGTGGCCTCCAAA 5 50 1 AAGCTGGTCTTTGTCTGAAGGAGCCTTCTCAATGCAG 15 189 1 TTTGCGGCAATTATTTTAAGGAGACATCCG 33 227 1 GAGTAATCAATAATTTTTAAGAGGATTTTGAG 4 174 1 ATACGTAGGCTTAATTTAGGGAAATTTTGTCGCATCA 9 90 1 CCATTACCCCTAAAATCAGGGAAACTTAACAATACTT 11 247 0 TAGATGAAAGTATAATAGATGAGATGTAGAAACCACA 15 84 0 CTTTCTGAACTTAAATCAAGGAGGTTAAATACTAAAA 0 145 1 AATGCGTTTATAGAATAGGGGAAATGAAGAGCACCGT 3 184 1 TTTCTTACCCTCTGTTTGTAGAGGTGTCTCAGTGCAA 6 66 1 TTGGAAATAATTGCATTGTAGAAAATTGCCATTAGAA 29 31 1 GTGGAAAAATCATCTTGGAGAATATCCTAAAGCT 0 7 1 GCATTCGGTTTTTTATACATGAAAAGAAAAAGAAAAG 9 40 0 TCAAAGATAAAAGATTCTTGGAAAATTCCTATTTATA 28 76 0 GTATTCCTCTTTTCTTAATAGAAAAAACTCCATTTTA 19 114 0 TAATTTTTTCTTTGTTTATAGAAAAAAAAGTCTTACC 33 145 1 * * ******** MAP Score: 9.6934 Motif 11 TCTTTGTCTGAAGGAGCCTTCTCAATGCAGC 15 196 1 CGTTCAAGCCAAAGAGACCTCTTTTCTTTTA 11 41 1 AAAAGTTAAAAAAGAGGCCTTATACATCTCT 12 141 1 GAGTCTTACTAAAGAGGCTTTGCCCGAAATT 30 46 1 CAATTATTTTAAGGAGACATCCG 33 234 1 ATGGCCTTGAAAGAAGGCCTTATTCTGAAGG 0 65 0 AAATATCTAACAGGAGACCTTC 32 28 1 ACGTCAATTTAAGGAGCATTCGAA 11 286 1 GTTTACAAAGAAAAAGTCCTTATTTTAATAT 3 42 0 GGGGTAAAACAGAGAGACTTTTCCTAGAATG 11 204 0 ACAAAATACCAAAGAGCATTTTAGTTCTAAT 29 61 0 AAAGATCAATAAGAAGACATCGGCTTTCTTC 30 95 1 CAATTGTTACAAAAAGTCCTAAAACGGTTTG 34 150 0 ATGCTTCTAAAGGGAGCATTCGGTTTTTTAT 9 61 0 TTGCCAACAAAGAGAGCCTTACTCTATATTT 18 162 1 ATCAAAATAGCAGGAGAACTCGC 9 123 1 TTTATAGAAAAAAAAGTCTTACCCTACCAAA 33 159 1 TCTATTAAGAAAAGAGGAATACTTCAAAAGC 19 129 1 ****** **** MAP Score: 9.39548 Motif 12 AATATTTTATTGGTAGTATTCGCAAGGTTTTGTGAAAGGGA 3 111 1 ATTTGTTATTTAGAAAAAGTCAAATCCCTTTCACAAAACCT 3 135 0 GAAAGAATGGTTGGAGTAATCAATAATTTTTAAGAGGATTT 4 161 1 AGAAAAAGAAAAGAAAAATCTTTCGATTTTTCTTTTCTACA 9 12 0 ATGCTTCTAAAGGGAGCATTCGGTTTTTTATACATGAAAAG 9 51 0 CTTTGCATTCTAGGAAAAGTCTCTCTGTTTTACCCCATGTC 11 199 1 TGGGGTGCTTATGAAAAAAACGATATGTTTTCTATGCGCCA 12 24 1 AAGACCTCCCTTGCAGGAGACGATTAGTTCTATATAATCGA 12 202 0 AATAGATGAGATGTAGAAACCACAAGGGTTTAAAGTCGAAT 15 67 0 ACGGTTCGTCTAGAAAAAGATAGCATTTTTTTAAATTCAAG 18 86 1 TTTTAAATTCAAGCAGGATACGTTCCCTCTTCATCTGAAAA 18 114 1 TACTAAGCTTTTGAAGTATTCCTCTTTTCTTAATAGAAAAA 19 125 0 ATCTTTGAGTTCTTAGTACCTAGAGTACTTTTCCTATTGTA 28 105 1 ACTTTTCCTATTGTAAAAATCTTCCCCCTCTGATAACCTGT 28 131 1 TATTTTCTTAAGGGAAAATTTCCTTTTCTTTTTAGAGAATT 28 177 1 TAAGTAAAATACTAAGCAGATTTGTTTCTTTGTTCCTCCAA 28 221 1 TTAGATAAGTTGGAAGAAAGCCGATGTCTTCTTATTGATCT 30 97 0 CCTTGTTGTAACTTAGTATGCTTCTCCTTTTTATGAGAAGT 30 199 1 AAACGCTTTTATGAAGCAATCTCAGACCTTTCCACAGCCCC 33 104 1 TTTGTGTAGCTAGGAGTACTTTGTTCCCTTTGCAGAAGATC 34 113 0 * * ** * * **** MAP Score: 8.26146 Motif 13 CTCTGTTTACAAAGAAAAAGTCCTTATTTT 3 47 0 TATTTGTTATTTAGAAAAAGTCAAATCCCT 3 147 0 TAATGCGTTTATAGAATAGGGGAAATGAAG 3 183 1 TTATACATGAAAAGAAAAAGAAAAGAAAAA 9 35 0 TACTGTAAATATAGAAAAACAAGAAAATTA 11 70 0 CTAGATTCTGATAGAATTGGATCGTTATGA 11 142 0 GCTTTGCATTCTAGGAAAAGTCTCTCTGTT 11 198 1 AAGAGATAGGTTAGAATAAGTTCGTTACAG 18 29 1 AACGGTTCGTCTAGAAAAAGATAGCATTTT 18 85 1 GCATGGAAATATAGAGTAAGGCTCTCTTTG 18 169 0 CTCCCTTAAAATAGTATAAGCATCTTAGGT 21 26 0 ATTCCTATTTATAGAAATAGAAAGTCGCTT 28 59 0 GATTTTTACAATAGGAAAAGTACTCTAGGT 28 122 0 AATTCTCTAAAAAGAAAAGGAAATTTTCCC 28 188 0 ATAATATTATTTAGAATTGGGTGGAGAGAA 33 20 0 TTCTTTGTTTATAGAAAAAAAAGTCTTACC 33 152 1 AAGCATTTTTATAGAATAAGTT 34 214 1 ********** MAP Score: 7.87397 Motif 14 GATATTCTCCAAGATGATTTTTCCAC 0 6 0 CAAGGTTGAGTAGAGTACTTGCTTTCCTAG 0 110 1 AGCTCAGTGGTAGAGCACTTGCATGGTAAG 4 97 1 AATAATTTTTAAGAGGATTTTGAG 4 182 1 TTTCTATATTTACAGTATTTTGAAAAGATA 11 83 1 TATGTAGAGAAACAGGATTTGGCGCATAGA 12 54 0 AAAGTTAAAAAAGAGGCCTTATACATCTCT 12 142 1 AGAACGGAAGTATAGGATTTTACGATTAAT 12 172 1 TTTTAAATTAAAGATCACTTTATATCCCCG 19 89 0 TCTTAGTACCTAGAGTACTTTTCCTATTGT 28 115 1 AAGATTATGTTAGAGTATTTATC 29 3 0 CAAAATACCAAAGAGCATTTTAGTTCTAAT 29 61 0 TCAAGGGGCATAGATGATTTCCAAGGATTA 29 177 1 AGTCTTACTAAAGAGGCTTTGCCCGAAATT 30 47 1 ********** MAP Score: 7.41087 Motif 15 TCAGAAAGTTTTGCTAGGAAAGCAAGTACTCTACTCAACCTT 0 111 0 GATAGTGAAAAAAATAAAACAATAAGCAGTATATTAAAATAA 3 12 1 AACAATAAGCAGTATATTAAAATAAGGACTTTTTCTTTGTAA 3 29 1 AAAAACTAAAATTATAAGAAGATAAGGAATAAGAATACACTG 6 22 0 TTTATACATGAAAAGAAAAAGAAAAGAAAAATCTTTCGATTT 9 24 0 AAATACTGTAAATATAGAAAAACAAGAAAATTAAAAGAAAAG 11 61 0 AGAGAGACTTTTCCTAGAATGCAAAGCACTATAGCGCTCCGA 11 183 0 GCTTATTTTCAGATGAAGAGGGAACGTATCCTGCTTGAATTT 18 118 0 AATGGAGTTTTTTCTATTAAGAAAAGAGGAATACTTCAAAAG 19 117 1 GGGGAAGATTTTTACAATAGGAAAAGTACTCTAGGTACTAAG 28 116 0 CTTATCGAATTCTCTAAAAAGAAAAGGAAATTTTCCCTTAAG 28 183 0 GAGAATTCGATAAGTAAAATACTAAGCAGATTTGTTTCTTTG 28 211 1 CCTTCACTTCTCATAAAAAGGAGAAGCATACTAAGTTACAAC 30 203 0 ACTCCTAGTCTCAGGATTACAACAAGCATTTTTATAGAATAA 34 191 1 * * * ** *** * * MAP Score: 7.04609 Motif 16 GGAGAATATCCTAAAGCTATTTACACTTGGGCTAAATCTCCTTC 0 26 1 AGTTCAGAAAGTTTTGCTAGGAAAGCAAGTACTCTACTCAACCT 0 112 0 GAGTAAACTAGAGGGGCTATAGAAGCACAAAAACCTCTGTTTAC 3 67 0 AACCTACGACCGCTTGCTTACCATGCAAGTGCTCTACCACTGAG 4 99 0 TGCTCTACCAGCTAAGCTACACACCCAGAAAATCGCGATGATGA 5 31 0 AACCCCCGACCGGCGGCTTTGGAGGCCACTGCTCTACCAGCTAA 5 60 0 TGAAAAAAACGATATGTTTTCTATGCGCCAAATCCTGTTTCTCT 12 35 1 CATCTAATGCTGGTAATGCAGAGGATCGTATTATTTA 13 3 1 TTAGTTTTTTCTACTGCTAGCCACTCTGGAACTCTACCTCAAAT 15 20 1 ATAATTGCCGCAAAAGCTGATTATACTTGAGAACATGGTTAATG 33 197 0 * *** * * **** MAP Score: 6.86105 Motif 17 GAAAATTAAAAGAAAAGAGGTCTCTTTGGCTTGAAC 11 42 0 AATCTCCTTCAGAATAAGGCCTTCTTTCAAGGCCAT 0 60 1 GGGGAAATGAAGAGCACCGTTCTATTTTTAGGGCTG 3 201 1 CTGGTAATGCAGAGGATCGTATTATTTAGTTCTAAA 13 19 1 GGTGCTTATGAAAAAAACGATATGTTTTCTATGCGC 12 27 1 TTCGTCTAGAAAAAGATAGCATTTTTTTAAATTCAA 18 90 1 AAAAATAAAGTTATATTCTTTACTATT 11 1 1 ATGGAAATATAGAGTAAGGCTCTCTTTGTTGGCAAG 18 161 0 CTACACACCCAGAAAATCGCGATGATGAAAATCATC 5 23 0 GCAGTATATTAAAATAAGGACTTTTTCTTTGTAAAC 3 37 1 ATAAGTTGGAAGAAAGCCGATGTCTTCTTATTGATC 30 98 0 TTTTCTATTAAGAAAAGAGGAATACTTCAAAAGCTT 19 126 1 AGATTGCTTCATAAAAGCGTTTTATTGATATTGTAT 33 90 0 ATAAGGAATAAGAATACACTGATTTTAACCTAT 6 7 0 TAGAAAAGTTAAAAAAGAGGCCTTATACATCTCTAG 12 138 1 GAAAAGAAAAAGAAAAGAAAAATCTTTCGATTTTTC 9 21 0 **** * ** * ** MAP Score: 6.71842 Motif 18 TCTATTGATGTTTTAAAATAAGTGACATAGACT 4 18 1 AACAAGAAAATTAAAAGAAAAGAGGTCTCTTTG 11 50 0 ATATTTACAGTATTTTGAAAAGATATATAGTAG 11 88 1 GTGCTTTGCATTCTAGGAAAAGTCTCTCTGTTT 11 196 1 TTACCCCATGTCGTACGAAAAGTATTGTTAAGT 11 228 1 AGCTAAAATTTCTTTTAAAAAGTAAAAAAACGG 18 57 1 GTAGTGAGGTTGAAACGAGAAGAATAC 18 204 1 GAGTTTTTTCTATTAAGAAAAGAGGAATACTTC 19 121 1 GTATCACCTATAATAGGAAAATTCTTGGGCCCC 19 163 1 AGATAAAAGATTCTTGGAAAATTCCTATTTATA 28 76 0 AAGATTTTTACAATAGGAAAAGTACTCTAGGTA 28 121 0 TTTCCTTTTCTTTTTAGAGAATTCGATAAGTAA 28 195 1 CTCTCGAATTTTCTTAGATAAGTTGGAAGAAAG 30 118 0 TGCTTCTCCTTTTTATGAGAAGTGAAGGTAATA 30 217 1 TCTTTGTTTATAGAAAAAAAAGTCTTACCCTAC 33 153 1 TACCCACAATTGTTACAAAAAGTCCTAAAACGG 34 154 0 ACAAGCATTTTTATAGAATAAGTT 34 212 1 * ** ******* MAP Score: 6.18252 Motif 19 GAGTAGAGTACTTGCTTTCCTAGCAAAACTT 0 117 1 TTACTTATGCATTGCTTCCCGGTCTTGAAAA 4 58 0 CCTACGACCGCTTGCTTACCATGCAAGTGCT 4 110 0 GTGTATTCTTATTCCTTATCTTCTTATAATT 6 24 1 TAATTTTAGTTTTTCGTTTCTTACCCTCTGT 6 50 1 ATCTTTCGATTTTTCTTTTCTACAAA 9 5 0 ATCGAAAGATTTTTCTTTTCTTTTTCTTTTC 9 26 1 TTTCTTTTCTTTTTCTTTTCATGTATAAAAA 9 37 1 TTTTAATTTTCTTGTTTTTCTATATTTACAG 11 67 1 GGCCTCTTTTTTAACTTTTCTATATTACCAG 12 129 0 TAAGGGAAAATTTCCTTTTCTTTTTAGAGAA 28 185 1 TAATGATTTGCTTTCCTCTTGGAGGAA 28 253 0 TCTTCCTATAATTCCTTGCCTCATTCACGGT 30 14 1 TAGGGTAAGACTTTTTTTTCTATAAACAAAG 33 154 0 *** ******* MAP Score: 1.29727