AlignACE 3.0 10/20/99 AlignACE2 -i CT/CT_operons002_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944241657 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 rl31 75 L31 Ribosomal Protein #1 pfrA 187 Peptide Chain Releasing Factor (RF-1) #2 rl19 25 L19 Ribosomal Protein #3 rnhB_2 63 Ribonuclease HII #4 flhA 181 Flagellar Secretion Protein #5 yscU 256 YopS Translocation Protein U #6 rnc 108 Ribonuclease III #7 CT309 166 hypothetical protein #8 atpE 108 ATP Synthase Subunit E #9 elaC 300 Sulphohydrolase/Glycosulfatase #10 xerC 61 Integrase/recombinase #11 sohB 102 Protease #12 CT495 211 ADP/ATP Translocase #13 pgsA_1 300 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase #14 CT552 300 hypothetical protein #15 fmu 124 RNA Methyltransferase #16 brnQ 149 Amino Acid (Branched) Transport #17 CT555 174 SWI/SNF family helicase #18 CT556 177 hypothetical protein #19 lpdA 208 Lipoamide Dehydrogenase #20 yscJ 103 Yop Translocation J #21 yscL 275 Yop Translocation L #22 topA 300 DNA Topoisomerase I-Fused to SWI Domain #23 CT663 300 hypothetical protein #24 CT665 43 hypothetical protein #25 CT666 26 hypothetical protein #26 fliI 73 Flagellum-specific ATP Synthase #27 fliF 272 Flagellar M-Ring Protein #28 pgm 296 Phosphoglycerate Mutase #29 CT763 157 hypothetical protein #30 CT764 153 hypothetical protein #31 ftsY 69 Cell Division Protein FtsY #32 xerD 248 Integrase/recombinase Motif 1 CCTTATTGGAAGATAAAAGGTAGAGACTTCTTC 30 59 0 GAGAGTTAAGAGAAAAAAGGGTTAGAAAAAGTT 14 149 0 TTGTTACAGAAGACAAAAGGGCTCTTTTAATTG 27 81 1 ATAATCGTATAAGAAAAAGGTTTTTTTTTTAAA 22 229 1 AGTATCCTACAAAGAAAAGGATGAAAAAGAAGG 27 178 0 AATATTTGCAAGATAAAAGCACGAGCAATTTTT 32 212 0 TCTGTTATCTAGAGAAAAGCGGGGCGAACACCC 1 24 1 AGAAATTCTAAAGAAAAAGCAAGATTAGTGCTT 5 72 1 GCCTAAACACAAGAAAAAGCTCGTTATGAGTGA 9 82 0 TTTATTATTAAGGAAAAAGAAATTCTAAAGAAA 5 55 1 CTTTCTAGGAAAGGAAAAGAGAGGTCCTTCAGA 19 101 0 TGTTAGCCTTAAGAAAAAGCTGTACAACTTCTT 5 15 0 TAAAGAAAAGAGAGCGGCATTAAG 3 1 1 CTTGCTTGCAAGGTAAGAGGTTTTGGAATGTAG 9 210 0 GTGCCCAAAGAAAAGAGGAGGCGGAGTGATC 12 8 1 TGATTATCTGAGGGAAGAGGATTCTCCTTCCAA 19 136 0 CTTACCTTGCAAGCAAGAGGAAGTCGCTTGTTA 9 226 1 TTTTTTTTTTAAAAAAAAGCTTTTGTGCGAGAG 22 249 1 TGCTATGGTGAGTGAAAAGGTGTGCGTGGGTT 20 81 1 TTTCCTTAATAATAAAAAGGCTGTGTTAGCCTT 5 38 0 AGCAGTCGAAAGACAAGAGGACTGGC 28 3 0 AGAACGGGACAGGAAAAAAGACTTTCTCTAACA 14 237 0 CCTATATACTAGACAAGAGAAAGATACTGTAA 4 159 1 TGTCTTTAGAAATCAAAAGAACGAGTCGTTCGT 23 65 1 AAGAGTCATTAGAGAAAAAGCGTCCTCTGGAAG 22 157 1 AAGTTGATTGAAGTAAAAAGAATAATAAAAGAT 31 36 0 CTGTTTCATTAAACAAAAAGTGGGTGTGAAGAA 22 108 1 GATCTATCGTAGGAAAAAGCAACCTCGTGCGAC 14 113 1 TATCCTCTTTAAGGAAGAGATCTCTCAAGGTGA 9 273 0 GGACTCCAGAAGGAAAAAGAAAAGATTAGTTAA 4 11 1 CTACACTCGTAATTAAAAGAAATCTTATTTTGT 32 132 1 TTTAAATAAAAATTAAAAGACCTGGAATACTAT 11 35 0 AGGAAATCTTAGAAAAAAGCGGAAAAAAAGTCC 14 201 0 CTCCCTTATAAGGTAAAAAATCTTTGCAAAGAT 28 217 1 TGGTAGCAGGAGAGAAAAAATAGGAACGTAAGA 19 13 0 CCATATATACAAAAAAAAGAAGCACCAAATAGC 21 42 1 TGTTTTTCTCAAGAAAGAAGGTGGCAGATGCTC 5 177 0 GTAAAATGAGAAATAAAAACCTTGATAAGAGTC 29 124 0 CCTACTTTAAAAAGAAAAACGATTTCTCATCTC 23 175 0 AGGAGTTTCTAGTTAAAAAGTTTTATAAATAAG 9 23 0 GCTCGTTATGAGTGAAAAGAAGCTCGTCGGTGA 9 64 0 *** ****** * MAP Score: 37.1454 Motif 2 AGATACCCTCTCTTTTACCGTTTACA 25 10 0 GGGCGAACACCCCGCTTTTTTTGTTTTAATA 1 45 1 GATCACTCCGCCTCCTCTTTTCTTTGGGCAC 12 10 0 GGGTTCGAATCCCTCTCTTTCCGTTTCTTTA 13 106 1 TTCCTTAGCTCCTACTTTTTTAAATCGGAGT 4 116 0 GTTCTTCACACCCACTTTTTGTTTAATGAAA 22 111 0 ACGTTCTTATCCTACTCTTTGTTTGGATCTA 14 88 1 TAAAGAGCATCCCTCTCTTGGCTCGAAGGAC 15 98 1 ATAAGGGTTTCTCACTTTTTTTCTATTTAAA 30 86 1 CAAGAAGAAGCCTTCTTTTTCATCCTTTTCT 27 168 1 GGGTGTTCGCCCCGCTTTTCTCTAGATAACA 1 26 0 TTTTTCCTGTCCCGTTCTTTCTCAAGAGCTT 14 252 1 TTTTTATAATCCCCCTGTTTTAGTACCGTTT 11 73 1 TTTAATAAGTCTCTCTTTTTGAATCTGACTT 1 69 1 TAAAGAACCCCTTACTCTTTGTTTATAAATG 5 142 1 TCTTTTTCATCCTTTTCTTTGTAGGATACTT 27 181 1 GCACGAACGACTCGTTCTTTTGATTTCTAAA 23 69 0 TTACAGTATCTTTCTCTTGTCTAGTATATA 4 161 0 AAGCACTAATCTTGCTTTTTCTTTAGAATTT 5 74 0 CTTAATGCCGCTCTCTTTTCTTTA 3 3 0 TTTTTAATAGCCTCTTTTTGTTACAGAAGAC 27 64 1 CTCTTACGTTCCTATTTTTTCTCTCCTGCTA 19 12 1 CTTTTTCTAACCCTTTTTTCTCTTAACTCTC 14 151 1 TACTCCAGGTCCTTTTCTTCTCAAGA 11 5 0 AGACTAAGATCCCGCTTATTGGCATTGTGT 22 280 1 CTATTTGGTGCTTCTTTTTTTTGTATATATG 21 43 0 TAACAAGCGACTTCCTCTTGCTTGCAAGGTA 9 228 0 AAACTCTCTGCTTGCTTTTGGAGTGTCTATG 13 214 1 AAAAAGAAGGCTTCTTCTTGTGAACAAGAAG 27 157 0 TCATAACGAGCTTTTTCTTGTGTTTAGGCTT 9 86 1 TCTTAGATAACCTATTGTTTTTAATAGCCTC 27 47 1 CTCGCAACATCCCCTTGTTTGCAAGACGATA 18 92 0 TCTGAAGGACCTCTCTTTTCCTTTCCTAGAA 19 101 1 GTCGTTCGTGCCCGATTTTTTTCTAAAATTC 23 89 1 CTTCTTATCCTCTCTTATTTATAAAACTTT 9 9 1 ACTCACTTATTTAGGCGAATAA 6 1 1 AATTTTTCCTCCTTATCTTTTATTATTCTTT 31 22 1 TATATTAGTCCCTCTTCATTTAACTTTTATG 22 201 0 CCACATAACCTGTTCATTTTGAAGCATTC 20 8 1 AAGAACATCCCTTACTTATTCAGTAAGGGAT 17 37 0 TACGTATTACCTTGATTTTTTCCTCCTAGGA 18 43 1 *** ******* MAP Score: 36.6859 Motif 3 AGAGACTTATTAAAACAAAAAAAGCGGGGTGTTCGC 1 47 0 CTGAAAAGTCAGATTCAAAAAGAGAGACTTATTAAA 1 69 0 TAAAGAAAAGAGAGCGGCATTAAGCC 3 0 1 CTCTTGACGTTGAGAACAGCAGAAAGGGCTTAATGC 3 26 0 GATTAGTTAAGAATCGGAGTAGAGGGATTCGAACCC 4 34 1 CTACTTTTTTAAATCGGAGTATAGCGCAGCCTGGTT 4 100 0 CCACTAAGCCTAAACACAAGAAAAAGCTCGTTATGA 9 86 0 TAATTATCCCAAATTTCAACAGAGTGCGAGGTTCCT 12 128 1 CAATGTAAAGAAACGGAAAGAGAGGGATTCGAACCC 13 106 0 TAGACACTCCAAAAGCAAGCAGAGAGTTTAGCTATG 13 207 0 TTCCTACGATAGATCCAAACAAAGAGTAGGATAAGA 14 92 0 AACAACCAGGAAATCTTAGAAAAAAGCGGAAAAAAA 14 205 0 TAATACGTAAAAAGAAGAATAAAAGGTCAATCATTT 18 16 0 AGCCTTTCTAGGAAAGGAAAAGAGAGGTCCTTCAGA 19 101 0 AGATGTCTTTAGAAATCAAAAGAACGAGTCGTTCGT 23 62 1 TGTAAACGGTAAAAGAGAGGGTATCT 25 3 1 CATCATATCAAGATTTCAGTAGAGAGTCCAGAAGAA 28 140 1 AGAATATATGAAATTCTAAAAAAGCGTCAATATTTT 29 68 0 TTGCTTTTTTAAATAGAAAAAAAGTGAGAAACCCTT 30 88 0 TAATCAAAGTTGATTGAAGTAAAAAGAATAATAAAA 31 39 0 AAACATTTTTAGAATAGAAGAAAGCGTATTTCCTCC 32 167 0 *** ** **** * MAP Score: 24.1544 Motif 4 TAAAGTCTAGTGTTCCCCAAAAATTGATTGCCAATGTACAC 1 107 1 TGTATTTCACCTAAAAATTCTTTTT 2 0 0 GCCTTTTTATTATTAAGGAAAAAGAAATTCTAAAGAAAAAG 5 50 1 TGCCACCTTCTTTCTTGAGAAAAACATTTATATACGGTAAC 5 184 1 AGGTTTAGTATTTGATTTTAAACGTTGTTATGATCTAACCT 8 11 1 TTGATCGTTTTTTTAAGATAAACGTTGTTTTTCTTGGTATC 8 73 1 CAGGTAGGAGTTTCTAGTTAAAAAGTTTTATAAATAAGAGA 9 20 0 TCTGAAACTGTGGAGAGACATAAGAAATTGTTTTCATTCTC 9 137 1 GGAAGTCGCTTGTTAGGGCATAAATGATTTCACCTTGAGAG 9 244 1 GGTCTTTTAATTTTTATTTAAAAATTCTTTTTATAATCCCC 11 46 1 GCGAGGTTCCTCGCATCACAAAAATTTTTCCCAAAGTCTTC 12 153 1 AAAAGCAACCTCGTGCGACAAAAACTTTTTCTAACCCTTTT 14 127 1 ATTCATCCTTTATTCTTTCCAAAGAACTTCTGTGACTTGGG 16 73 1 TTTGAAGCATTCTCTGCAGAAAAAATGTTCCCGATTGGCAC 20 27 1 AAACGGCTCATAGGGAAAGAAACAACATTCTTCTCAATGTT 22 62 1 ACTAATATAATCGTATAAGAAAAAGGTTTTTTTTTTAAAAA 22 223 1 AAAGGTTTTTTTTTTAAAAAAAAGCTTTTGTGCGAGAGACT 22 244 1 TGAGTTGATTTGTGCCGGGAAAATGTGTTTTGGGAGATGTC 23 28 1 TCCCTTTCAATTTAAAGTACAAAAGAATTTTAGAAAAAAAT 23 103 0 CAATACCTACTTTAAAAAGAAAAACGATTTCTCATCTCGAT 23 172 0 CCCCCTCCCTTATAAGGTAAAAAATCTTTGCAAAGATAATC 28 213 1 CTCTACCTTTTATCTTCCAATAAGGGTTTCTCACTTTTTTT 30 67 1 TCACTTTTTTTCTATTTAAAAAAGCAATTCTTTTTAGATTC 30 97 1 CGAGCAATTTTTTATAAGGATAAACATTTTTAGAATAGAAG 32 183 0 * * ***** ** * MAP Score: 18.6587 Motif 5 ATCTGCCACCTTCTTTCTTGAGAAAAACATTTAT 5 181 1 TTTTGAAGCATTCTCTGCAGAAAAAATGTTCCCG 20 26 1 AGAGGTTTCTATCTCTAGAATTTTTCACCA 29 6 1 TTAATCATCTTTCTTTCAGTAGGATGGAGAGCTA 32 53 1 TCATCCTTTATTCTTTCCAAAGAACTTCTGTGAC 16 75 1 CCCTTTTGTCTTCTGTAACAAAAAGAGGCTATTA 27 68 0 CTCACTTTTTTTCTATTTAAAAAAGCAATTCTTT 30 96 1 ATACGCTTTCTTCTATTCTAAAAATGTTTATCCT 32 174 1 TCAATATCCTCTTTAAGGAAGAGATCTCTCAA 9 278 0 AGAAATCTTATTTTGTCAGGAGGAAATACGCTTT 32 149 1 AAGAAAAAGGTTTTTTTTTTAAAAAAAAGCTTTT 22 239 1 TTTCTCTTAACTCTCTATCTAAGAAATCTTTAGC 14 167 1 TTTTTCATCCTTTTCTTTGTAGGATACTTAGCGG 27 183 1 ATGAAAAACGCTCTTTAAAAAAAATATTCCGTTC 5 106 1 AAACCTCGATCTCTGTGTAAAAAAGAATGCGATC 21 132 1 TCTCTAATGACTCTTTTTTAAAAAATTACGGTTC 22 138 0 AGAATGTTGTTTCTTTCCCTATGAGCCGTTTTCT 22 59 0 AGTTAAAAAGTTTTATAAATAAGAGAGGATAAGA 9 12 0 ACTAATCTTGCTTTTTCTTTAGAATTTCTTTTTC 5 67 0 ATTTATAAAACTTTTTAACTAGAAACTCCTACCT 9 26 1 ACTCTAGTATCTCTCTAACAAAGACCAGAGTGTA 1 143 0 GAACCCCTTACTCTTTGTTTATAAATGGGATGAG 5 146 1 TGTTTGAATGTTTTTTGTTGATAAGCTGGGGGAA 13 162 1 TAATTGATCGTTTTTTTAAGATAAACGTTGTTTT 8 70 1 TTCGCCCCGCTTTTCTCTAGATAACAGAAAGTTC 1 18 0 ACGAGCAATTTTTTATAAGGATAAACATTTTTAG 32 191 0 GAAAAGGCTCCTCTATCGAGATGAGAAATCGTTT 23 158 1 ACCCCGCTTTTTTTGTTTTAATAAGTCTCTCTTT 1 53 1 **** * ***** MAP Score: 17.9209 Motif 6 CTTTTTCTAACCCTTTTTTCTCTTAACTCTCTAT 14 151 1 ATTAAAAGAGCCCTTTTGTCTTCTGTAACAAAAA 27 78 0 CGGCATTAAGCCCTTTCTGCTGTTCTCAACGTCA 3 24 1 TTTCTGTTTTCTCTTTCATCCCTTTCAATTTAAA 23 128 0 AAATGATTGACCTTTTATTCTTCTTTTTACGTAT 18 16 1 ATTGAGAGTCCCTTTTGAGCTTCTCGGTCATCCC 27 110 1 GACTTCTTCTGCCTTTACTCTAGTATCTCTCTAA 1 159 0 GGGTTCGAATCCCTCTACTCCGATTCTTAACTAA 4 36 0 AAGAAGCCTTCTTTTTCATCCTTTTCTTTGTAGG 27 172 1 TTCGGAGCTTTTTGGGCCGGTTGTTTCGTTG 13 7 1 GTTAGAGAAAGTCTTTTTTCCTGTCCCGTTCTTT 14 238 1 TCCAGAGGACGCTTTTTCTCTAATGACTCTTTTT 22 154 0 TCTTTAGCGGACTTTTTTTCCGCTTTTTTCTAAG 14 193 1 CTCTTTAACAGTCTTTGGGCCTTTTTATGGCTTC 18 145 0 TCTGAAGGACCTCTCTTTTCCTTTCCTAGAAAGG 19 101 1 AGGGTTTCTCACTTTTTTTCTATTTAAAAAAGCA 30 89 1 TTGTTTCTTTCCCTATGAGCCGTTTTCTTTGAGG 22 53 0 AACTTTTATGATTTTTATTCCCTTCCAGAGGACG 22 177 0 AGCATTGTAGATTTTTTCTCCGATGGCTATGTTA 21 72 1 ATCCCTTTAAACTGATTCAAAATCCT 27 2 1 CAACCCGAAAGCTTCTTAGCTCATAAGTACAGCA 10 28 1 TTACGTTCCTATTTTTTCTCTCCTGCTACCACTT 19 15 1 CAATATTTTCGCTTATAGGCCACTATGGGCTAAT 29 43 0 CAGTCCTCTTGTCTTTCGACTGCTTAATATTTTG 28 12 1 ****** *** * MAP Score: 16.9127 Motif 7 CACAGAAGTTCTTTGGAAAGAATAAAGGATG 16 76 0 AACAAAAGCTCTTGAGAAAGAACGGGACAGG 14 257 0 CACCTTCTTTCTTGAGAAAAACATTTATATA 5 187 1 CTGTGTTAGCCTTAAGAAAAAGCTGTACAAC 5 20 0 ACCAGGAAATCTTAGAAAAAAGCGGAAAAAA 14 206 0 CCAATACCTACTTTAAAAAGAAAAACGATTT 23 183 0 GAAAAACGCTCTTTAAAAAAAATATTCCGTT 5 108 1 ACTTCTGTGACTTGGGAAGGATGATATGCCC 16 98 1 CCGGTTGTTTCGTTGGAAAGATGACTGAGTG 13 26 1 TTGGATCTATCGTAGGAAAAAGCAACCTCGT 14 110 1 TATTGAAGACTTTGGGAAAAATTTTTGTGAT 12 167 0 TCTTGAGAAGAAAAGGACCTGG 11 1 1 GGTAAAAAATCTTTGCAAAGATAATCCGCAA 28 228 1 TTCCCACAATCTTGGGCAAGAGACTCTTATC 29 103 1 TACAAAAGAATTTTAGAAAAAAATCGGGCAC 23 96 0 GAAGCATTCTCTGCAGAAAAAATGTTCCCGA 20 30 1 ACCGTAATTTTTTAAAAAAGAGTCATTAGAG 22 140 1 AAAGCTTTTTTTTAAAAAAAAAACCTTTTTC 22 241 0 *** ******* MAP Score: 11.4512 Motif 8 CGGGTATGCTCTCCCTTCTGTTATGTGAGAT 0 18 1 CAACCCCAAAATCACTATCTTAGTATGTGAA 0 50 0 GGGCGAACACCCCGCTTTTTTTGTTTTAATA 1 45 1 GTTTTAATAAGTCTCTCTTTTTGAATCTGAC 1 67 1 TTCTTAACTAATCTTTTCTTTTTCCTTCTGG 4 16 0 TTACAGTATCTTTCTCTTGTCTAGTATA 4 163 0 GAACCCCTTACTCTTTGTTTATAAATGGGAT 5 146 1 ATCATAATTGATCGTTTTTTTAAGATAAACG 8 66 1 CTTCTTATCCTCTCTTATTTATAAAACTTT 9 9 1 CAACAATTCCATCCCTACATTCCAAAACCTC 9 196 1 ACCTTGAGAGATCTCTTCCTTAAAGAGGATA 9 275 1 TATACTCCAGGTCCTTTTCTTCTCAAGA 11 7 0 TTTTTATAATCCCCCTGTTTTAGTACCGTTT 11 73 1 ACTCCGCCTCCTCTTTTCTTTGGGCAC 12 6 0 GAGGGTTCGAATCCCTCTCTTTCCGTTTCTT 13 104 1 CATAGCTAAACTCTCTGCTTGCTTTTGGAGT 13 207 1 TAGGGAGGATATCGCTCTCTG 14 0 0 GAGCGATATCCTCCCTACTTTAAAGCAACGA 14 14 1 TCTTATCCTACTCTTTGTTTGGATCTATCGT 14 92 1 AACTTTTTCTAACCCTTTTTTCTCTTAACTC 14 149 1 TTTCTCTTAACTCTCTATCTAAGAAATCTTT 14 167 1 TTTAAAGAGCATCCCTCTCTTGGCTCGAAGG 15 96 1 GCAAAAGAACATCCCTTACTTATTCAGTAAG 17 41 0 CTCCTAAACACTCGTTCCTTTCTGCCTAGGT 17 115 1 CTCGCAACATCCCCTTGTTTGCAAGACGATA 18 92 0 TGAAGGACCTCTCTTTTCCTTTCCTAGAAAG 19 103 1 CTGACCCTCGATCGCTCTCGTTTTTAACATA 21 99 0 AAAGAATGCGATCCTTGTCTGGCTATCCCTA 21 153 1 CGCTCCTTTGCTCGTTACTTTATTCCCAACG 21 204 0 GGCAGGGAACCTCGCTCCTTTGCTCGTTACT 21 216 0 AGGAGCGAGGTTCCCTGCCTGTTGGCTTTGC 21 228 1 TTATATTAGTCCCTCTTCATTTAACTTTTAT 22 202 0 GCACGAACGACTCGTTCTTTTGATTTCTAAA 23 69 0 TCACGTGCTCATCTCTAACTGAGAGCTCTGG 23 275 0 AGATACCCTCTCTTTTACCGTTTACA 25 10 0 GTTTTTAATAGCCTCTTTTTGTTACAGAAGA 27 63 1 CTTCTTTTTCATCCTTTTCTTTGTAGGATAC 27 179 1 GAAGAGTTCCCCCCCTCCCTTATAAGGTAAA 28 203 1 GACGGAAGAAGTCTCTACCTTTTATCTTCCA 30 55 1 ATAAGGGTTTCTCACTTTTTTTCTATTTAAA 30 86 1 TTAATTTTTCCTCCTTATCTTTTATTATTCT 31 20 1 ****** **** MAP Score: 8.59561 Motif 9 AGCGGCATTAAGCCCTTTCTGCTGTTCTCA 3 22 1 TTACAGTATCTTTCTCTTGTCTAGTAT 4 164 0 GAAGTTGTACAGCTTTTTCTTAAGGCTAAC 5 17 1 AGGCTAACACAGCCTTTTTATTATTAAGGA 5 39 1 ACTCATAACGAGCTTTTTCTTGTGTTTAGG 9 84 1 GGAAGTTATAATTTTTCTCTGAAACTGTGG 9 120 1 GAGGGTTCGAATCCCTCTCTTTCCGTTTCT 13 104 1 TAGGGAGGATATCGCTCTCTG 14 1 0 TTACGTTCTTATCCTACTCTTTGTTTGGAT 14 86 1 GTGCGACAAAAACTTTTTCTAACCCTTTTT 14 139 1 TGTTAGAGAAAGTCTTTTTTCCTGTCCCGT 14 237 1 TTTAAAGAGCATCCCTCTCTTGGCTCGAAG 15 96 1 TTCATTTTGAAGCATTCTCTGCAGAAAAAA 20 22 1 CAAGGATCGCATTCTTTTTTACACAGAGAT 21 140 0 TTAGAGAAAAAGCGTCCTCTGGAAGGGAAT 22 165 1 CTCGCACAAAAGCTTTTTTTTAAAAAAAAA 22 250 0 TTTCTCTTTCATCCCTTTCAATTTAAAGTA 23 125 0 TCGATAGAGGAGCCTTTTCTGTTTTCTCTT 23 147 0 TGTTTTTAATAGCCTCTTTTTGTTACAGAA 27 62 1 CTTCTTTTTCATCCTTTTCTTTGTAGGATA 27 179 1 CTATCTAAGAAACCTTCTCTCCGAAACAAC 28 64 1 TTGAGAGGAGAACTTCTTCTGGACTCTCTA 28 159 0 TCATCCTTAAATCTTGCTCTCT 28 284 1 ATATTTAATCATCTTTCTTTCAGTAGGATG 32 49 1 ********** MAP Score: 4.14972