AlignACE 3.0 10/20/99 AlignACE2 -i CT/CT_operons006_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944242036 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 fabI 237 Enoyl-Acyl-Carrier Protein Reductase #1 acpP 300 Acyl Carrier Protein #2 fabH 137 Oxoacyl Carrier Protein Synthase III #3 yaeT 300 Omp85 Analog #4 CT242 68 (OmpH-Like Outer Membrane Protein) #5 lpxD 27 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase #6 tpiS 196 Triosephosphate Isomerase #7 CT330 208 hypothetical protein #8 pykF 96 Pyruvate Kinase #9 uvrA 22 Excinuclease ABC Subunit A #10 dnaX_2 217 DNA Pol III Gamma and Tau #11 ndk 159 Nucleoside-2-P Kinase #12 ruvC 107 Crossover Junction Endonuclease #13 CT503 286 hypothetical protein #14 gapA 43 Glyceraldehyde-3-P Dehydrogenase #15 rs11 21 S11 Ribosomal Protein #16 rs13 55 S13 Ribosomal Protein #17 secY 22 Translocase #18 rl18 21 L18 Ribosomal Protein #19 rl6 27 L6 Ribosomal Protein #20 rl16 32 L16 Ribosomal Protein #21 rl2 23 L2 Ribosomal Protein #22 rl3 300 L3 Ribosomal Protein #23 lpxC 100 UDP-3-O-Acyl GlcNAc Deacetylase #24 cutE 63 Apolipoprotein N-Acetyltransferase #25 yciA 135 Acyl-CoA Thioester Hydrolase #26 CT538 300 hypothetical protein #27 ybeB 300 iojap superfamily ortholog #28 CT809 300 hypothetical protein #29 rl32 259 L32 Ribosomal Protein #30 plsX 22 FA/Phospholipid Synthesis Protein Motif 1 GGATCTCGCTAGAGGAAAGAGGCTATTTTTG 27 179 1 GAGAGTAGGTAGAGAACAGGGATATGGGCGG 26 197 1 TAGGAAGAAAAGAGAACAGAGAGAACTTTGA 3 89 0 TTTACACAATAAAGGAAAGGGTTACTAACGA 12 39 0 TGTCTTCTTGAGAGAGGAGAGTAGCAGATTC 0 201 0 TAAAATTTCCAGGGGATAGAGAAGATATTCA 28 233 1 AAAGTATATTAGAGAAAAAGGTTTTTGGGAA 29 40 0 CTCAAGAACCAGAGAAAAAAGATGTGCTCAG 13 205 0 AAAGCTCTTCAAAGAGTAGGGGATCTCGCTA 27 159 1 TTGCGATTCGGAAGAAGAGGGT 28 288 1 TTCGCCGGGAGAAGAATAGAGAGCAAGTCTT 29 75 1 AATCCGAAAGGAGAAGGAGAGCATCCT 4 6 1 CCAATAGGTGAAAGGAGAAGGATGCTCTCCT 4 24 0 CCAGGTTTCTAGAGTAAAGAGTTTCCTTGTC 0 114 0 CAATTACAATAGAGAATCGAGGATAATTTGA 3 135 0 CTAACTTCGTAAAAGAGAGAGTATATTTTTT 10 91 0 TAAAGAAGGAAGAGAAGAATAAC 21 3 1 GCTATGGCACAGGAGAAAGAGAGGCAAAAAG 11 130 1 GATGCAAAATAAAGGTTAGGGTATAAACCTC 2 61 1 AGAGATGACTGGGGAGTAGAGGTGGGCCTGT 25 62 1 GCTTGCTAAAAAAAAAAAAGGATAATATACG 23 56 1 ****** **** MAP Score: 17.7418 Motif 2 AACATTTGACAAGGAAACTCTTTACTCTAGAAA 0 107 1 TTTGATTTAGAAGGCATTTCGTTGGCTGTATAT 1 45 1 CTTAAGATGGAAGGCGCTTCATTTTGAAATGAA 1 262 1 GAACCTGCTAGAGGGGTTGCTTTTCGGGCTTTT 3 45 1 GAAAACTATGAATGGGTTTCATTAATCTTTTTG 10 160 0 GCTATTTAACTCGGGGTATCTTTTTG 13 270 1 ATATTACTTTAAGGGAGGCCCTTCGT 16 39 1 GGTTTTACTAGTGGAGCTTCCTTGGAAGAAAAC 22 20 0 TGTTTGCTTTAAGGAGCCGCGTTTTCTTTGTCG 22 168 1 AGGATAATATACGGGGTCTCTTTGTCAGGGTTT 23 74 1 GTAACTTCTAAGGGGATTCTTTTTCTCTCATC 24 9 1 TAAAGGGGCTCCCTTACTAGCTTAC 24 48 0 TCCTCCAAGGAATTTCTTGATTTTCTTCT 25 6 1 CTTGTGCCTAACGGAAAATCATGATAGCATGTA 26 81 1 GCTCTAGGGGTAGGGGCATCCTGAATCGACTAC 26 111 0 CCTCCTTCTAAAGGGAAGCCTTTCCGCCCATAT 26 218 0 ACCTATTTGTTAGGGGAAGCATGGGGAAAACCT 28 78 1 GCGGTATATTTTGGGGAGTCGTTCCACAAAATG 29 155 1 ****** ** ** MAP Score: 14.7573 Motif 3 TTGTCTTCTTGAGAGAGGAGAGTAGCAGATT 0 202 0 TAAAGAAGGAAGAGAAGAATAAC 21 7 1 ATTTCCAGGGGATAGAGAAGATATTCATGCT 28 237 1 TAGAATGTGCGAAAGAGTAGACTTGTAGGGA 1 133 1 TTGCAAGGAAGTGAGAGTAGGTAGAGAACAG 26 185 1 TACAAATATAGGAAGAAAAGAGAACAGAGAG 3 97 0 CTCTTTAGAGAGAGAAAAAAAACCTTCG 29 7 1 CTTTTACGAAGTTAGAGTAGATTAATACAGG 10 107 1 TTCATACAAGGCAAGAGAAGCTTCTAAAGAC 7 88 0 TAACCAATAGGTGAAAGGAGAAGGATGCTCT 4 27 0 GCAAAATGTTGCGAGAAAAGCCTTAGCTCTT 27 36 1 TCAAGAACCAGAGAAAAAAGATGTGCTCAGA 13 204 0 GCGGGTGCGTGTGAAAAAAGAT 2 125 1 ACAGAAAAAAGTAAGACAAGAAGATTAGCAT 6 48 1 TTTGCGATTCGGAAGAAGAGGGT 28 287 1 TCGTTTCTATGGAAGAGATGACTCGCTTGTG 11 96 1 CTTCGTAAAAGAGAGAGTATATTTTTTATAG 10 87 0 AGGGGATCTCGCTAGAGGAAAGAGGCTATTT 27 176 1 CATTCAAGATGAGAGAAAAAGAATCCCCTTA 24 18 0 AGGGTAAAGTAGAGTCGAACT 18 2 1 GCTCTTCCCAGAAAGAGTAAGAATAAAACTT 3 240 1 * ********* MAP Score: 14.2454 Motif 4 TTTATTTAAAGCTAGATTTTTTTTGCTATAGACT 1 178 1 AGCAGTATACTCGGTTTTTTCTTTTTGTTTGCGG 2 95 1 GGGTTGCTTTTCGGGCTTTTTTTCGTTGTTTTCA 3 58 1 AATCTTCTTGTCTTACTTTTTTCTGTGAATTTGC 6 40 0 TGAAACCCATTCATAGTTTTCTTCATCAAGAATA 10 172 1 TCTCCTTTTTGCCTCTCTTTCTCCTGTGCCATAG 11 131 0 GAAGTTCATTGCTTTTTTTTAGAACTTTA 13 5 1 CTTGTTCTGAGCACATCTTTTTTCTCTGGTTCTT 13 199 1 GTTATTCTTCTCTTCCTTCTTTA 21 4 0 AGCGTTATAAGTTTTCTTCCAAGGAAGCT 22 5 1 GAACGATTTTTCAGGCTTTGTTTTTGCGATTTTT 22 55 1 GCTTTAAGGAGCCGCGTTTTCTTTGTCGTGGAAA 22 173 1 CCGTATATTATCCTTTTTTTTTTTTAGCAAGCAA 23 54 0 CCAAGGAATTTCTTGATTTTCTTCTATATCGAGA 25 14 1 GGGAGGTTAGGCCTGTTTTGCTTTTTGTAAAAAT 26 147 1 ACTTATCCTTACTTTTTTCAGTTGCTTAA 26 281 0 TAAGATAAGGTCGAGCTTTTTTTCTAAAGAGAAA 27 248 0 TTGGGAAGCCGAAGGTTTTTTTTCTCTCTCTAAA 29 13 0 AGGAAGACTTGCTCTCTATTCTTCTCCCGGCGAA 29 75 0 ** ******** MAP Score: 12.7694 Motif 5 AAGAATGGTGCTCTTCCCAGAAAGAGTAAGAA 3 231 1 AGATCCCCTACTCTTTGAAGAGCTTTCTCAAA 27 153 0 AAAGCCTTAGCTCTTTGAAATAAAAATATGTC 27 52 1 GACACCCCCTCTCTTCGCAGTGAAAACGTATA 29 111 0 CTTGAGTAGTCTCTTCCTAATATGTGGGGACG 3 173 1 GGTCTATGATCTCTTCCAAACGTTTCATAGCG 7 37 0 TACAAGTCTACTCTTTCGCACATTCTATGCGT 1 128 0 AATCACCAGCCTCCTTCTAAAGGGAAGCCTTT 26 228 0 GTTATAAGTTTTCTTCCAAGGAAGCTCCACTA 22 13 1 TATACGGGGTCTCTTTGTCAGGGTTTTGC 23 81 1 CTCTTTAGAGAGAGAAAAAAAA 29 0 1 TGGAAAAAATCTCTTTTGAAGACGCTATGAAA 7 15 1 AGGGATTTTTCTCTTTAGAAAAAAAGCTCGAC 27 241 1 TAAATTATAATTCTTCCAAATATCTTACCGCG 28 130 0 AATCAAGAAATTCCTTGGAGGA 25 0 0 GAAAACGCGGCTCCTTAAAGCAAACAAAGGCG 22 162 0 CTACTCTCACTTCCTTGCAAAAGTATTTTTAC 26 173 0 AAAATAAGCCTTCCTTGCAAGAAATCGAGTAT 6 122 1 AATATACTCTCTCTTTTACGAAGTTAGAGTAG 10 95 1 GAGCCGCGTTTTCTTTGTCGTGGAAATCGCTC 22 181 1 AACTCCCGGATTCTTTTAAGGATTTTTTATTT 0 16 1 AGCGAGTCATCTCTTCCATAGAAACGAAATGA 11 91 0 AGTAAAGAGTTTCCTTGTCAAATGTTTAATAG 0 101 0 CTCGTGGATATTCTTTACCAAAAATAGCCTCT 27 196 0 AATTCTTTCCTATAAAAATATAAC 4 54 0 ******* ** * MAP Score: 12.3759 Motif 6 GTAAGAATGGTGCTCTTCCCAGAAAGAGTAAGAATA 3 229 1 GCGTTATAAGTTTTCTTCCAAGGAAGCTCCACTAGT 22 11 1 TTTGTAAAAATACTTTTGCAAGGAAGTGAGAGTAGG 26 170 1 ATCCTTTTTTTTTTTTAGCAAGCAAGCGATATCAAA 23 43 0 TATTACTTCCTTTATCTAGAAAAGTCTGCGCTA 3 277 0 GTAATACTCGATTTCTTGCAAGGAAGGCTTATTTTT 6 121 0 GTCCTAATCTTGCTCTGGCATGGAAGTTAGCTTGAG 27 102 1 AAACTATTAAACATTTGACAAGGAAACTCTTTACTC 0 98 1 GTCGAGCTTTTTTTCTAAAGAGAAAAATCCCTTTGA 27 237 0 AAGGATTTTTTATTTTTAACAGGAAATTCTACATAT 0 33 1 GAGCCGCGTTTTCTTTGTCGTGGAAATCGCTCTTGC 22 181 1 TCTGCTACTCTCCTCTCTCAAGAAGACAAAATGGGG 0 204 1 TCTTTTTCTCTCATCTTGAATGTAAGCTAGTAAGGG 24 27 1 GGCTGGATCCAGGTTTCTAGAGTAAAGAGTTTCCTT 0 117 0 CCTATTGGTTATATTTTTATAGGAAAGAATT 4 47 1 AAAAACTTCTATGTCGAGCAAGAAAATCATTTCT 26 8 0 AGAGTAGGGGATCTCGCTAGAGGAAAGAGGCTATTT 27 171 1 AACGATCGCAAAATGTTGCGAGAAAAGCCTTAGCTC 27 29 1 * *** * ** *** MAP Score: 11.8523 Motif 7 TAAGGGGATTCTTTTTCTCTCATCTTGAAT 24 18 1 TCCCAAAAACCTTTTTCTCTAATATACTTT 29 41 1 TGAGCACATCTTTTTTCTCTGGTTCTTGAG 13 206 1 GCCGAAGGTTTTTTTTCTCTCTCTAAAGAG 29 10 0 TAAGGTCGAGCTTTTTTTCTAAAGAGAAAA 27 247 0 AAAGCTAGATTTTTTTTGCTATAGACTCTG 1 185 1 ACCAGGAAGACTTGCTCTCTATTCTTCTCC 29 82 0 CGCCCATATCCCTGTTCTCTACCTACTCTC 26 197 0 AGAAATGATTTTCTTGCTCGACATAGAA 26 8 1 CAAAGTTCTCTCTGTTCTCTTTTCTTCCTA 3 90 1 GTTTCATTAATCTTTTTGCTGATTAGTTTA 10 148 0 ATTCGCCGCCTTTGTTTGCTTTAAGGAGCC 22 156 1 TTTGATATCGCTTGCTTGCTAAAAAAAAAA 23 43 1 GAATTTCTTTTACGCTGCTGGA 30 6 0 GTATACTCGGTTTTTTCTTTTTGTTTGCGG 2 99 1 TTTTCGGGCTTTTTTTCGTTGTTTTCAAAG 3 65 1 TCAAAGGGATTTTTCTCTTTAGAAAAAAAG 27 237 1 ACAAGGAAACTCTTTACTCTAGAAACCTGG 0 115 1 GTATATTATCCTTTTTTTTTTTTAGCAAGC 23 56 0 CGTCTTTCAACTTTCATTCTTAAATTATAA 28 152 0 ********** MAP Score: 11.0611 Motif 8 TCTGAGTTTTTGATTTAGAAGGCATTTCGTTG 1 37 1 GAAAAGCAACCCCTCTAGCAGGTTCGGGGGAG 3 38 0 AAAACTTCATCCCTAGCGCAGACTTTTCTAGA 3 264 1 TCATTGAAACCATATAGCAGGT 9 9 1 AAATCAGGGATCCTTTCGCAGGTATTTCTGAA 11 10 1 AAACCTAGAACGATTTTTCAGGCTTTGTTTTT 22 48 1 TCTCTTGTGTGGATGTCGCAGGTCATATACCA 22 118 1 TCGTGGAAATCGCTCTTGCAGGATGGAGGGCA 22 198 1 TCTTTTTCTCTCATCTTGAATGTAAGCTAGTA 24 27 1 ATAGTAGTCTCGATATAGAAGAAAATCAAGAA 25 23 0 GCTATTAGACTCATATAGAAGGGTGAT 25 118 1 ATGCCCCTACCCCTAGAGCATGGGGAGGTTAG 26 125 1 GGAAAGGCTTCCCTTTAGAAGGAGGCTGGTGA 26 226 1 GTCCTAATCTTGCTCTGGCATGGAAGTTAGCT 27 102 1 **** * ***** MAP Score: 10.9441 Motif 9 TCTCGCTAGAGGAAAGAGGCTATTTTTGGTAA 27 182 1 CGCTCTTGCAGGATGGAGGGCATGGCCGTTTG 22 208 1 GAAGAAAAGAGAACAGAGAGAACTTTGAAAAC 3 85 0 GCCGGGAGAAGAATAGAGAGCAAGTCTTCCTG 29 78 1 AGACTAGTCAAGATAGAGGCTATTAGACTCAT 25 100 1 ATCCGAAAGGAGAAGGAGAGCATCCTTCTCCT 4 11 1 AATTTCCAGGGGATAGAGAAGATATTCATGCT 28 236 1 TAACTTCGTAAAAGAGAGAGTATATTTTTTAT 10 89 0 CCCACATATTAGGAAGAGACTACTCAAGACCT 3 169 0 GGCACAGGAGAAAGAGAGGCAAAAAGGAGAAT 11 135 1 CTCTTTAGAGAGAGAAAAAAAACCTTCG 29 6 1 TTTTCACTGCGAAGAGAGGGGGTGTCCCCTTG 29 117 1 GTCTTCTTGAGAGAGGAGAGTAGCAGATTCTT 0 199 0 TAAAGAAGGAAGAGAAGAATAAC 21 6 1 AAGTGAGAGTAGGTAGAGAACAGGGATATGGG 26 193 1 GCTTCCCTTTAGAAGGAGGCTGGTGATTAAAA 26 232 1 ACCAATAGGTGAAAGGAGAAGGATGCTCTCCT 4 24 0 GCTTACATTCAAGATGAGAGAAAAAGAATCCC 24 22 0 *** ****** * MAP Score: 10.649 Motif 10 ATTCTTACTCTTTCTGGGAAGAGCACCATTC 3 233 0 AAAAATACTTTTGCAAGGAAGTGAGAGTAGG 26 175 1 ATAAGTTTTCTTCCAAGGAAGCTCCACTAGT 22 16 1 ACTCGATTTCTTGCAAGGAAGGCTTATTTTT 6 121 0 CCAGACTTCCTTATTGGGGAGGGTAGCTATC 29 214 1 GAGAAAAAGGTTTTTGGGAAGCCGAAGGTTT 29 29 0 ACCGAGTATACTGCTAGGGAGGTTTATACCC 2 79 0 ATTACAGAGATGACTGGGGAGTAGAGGTGGG 25 57 1 GTCGCGGTATATTTTGGGGAGTCGTTCCACA 29 152 1 CGATTAAAATTTCCAGGGGATAGAGAAGATA 28 229 1 GCGTCCCCACATATTAGGAAGAGACTACTCA 3 175 0 CTCATTTCGTTTCTATGGAAGAGATGACTCG 11 90 1 GCTTATATTACTTTAAGGGAGGCCCTTCGT 16 35 1 CGCTCTTTGAATCCTGGGGATCCCCAGACTT 29 191 1 TCGCGGTAAGATATTTGGAAGAATTATAATT 28 129 1 AATCTTGCTCTGGCATGGAAGTTAGCTTGAG 27 107 1 CATCTAGCTAATCCAAGGAATAGGCAAGCGT 10 37 0 TCCTCCAAGGAATTTCTTGATTT 25 2 1 ** ******** MAP Score: 10.4949 Motif 11 TGCTACTCTCCTCTCTCAAGAAGACAAAATGG 0 206 1 CTTCTGAGTTTTTGATTTAGAAGGCATTTCGT 1 35 1 GTTACTCTAGTTTTATTTAAAGCTAGATTTTT 1 167 1 TATTACTTCCTTTATCTAGAAAAGTCTGCGC 3 279 0 GTATCTCAAATTTTATTTAAAGTGAGGCT 10 7 0 CTATACTATTCTTGATGAAGAAAACTATGAAT 10 180 0 AGTTCATTGCTTTTTTTTAGAACTTTAACATA 13 12 1 AACACTCTCTCCTAAAAATTA 15 3 0 AAACTTTACCTAAAAGTTCTAG 17 7 0 ATATCGCTTGCTTGCTAAAAAAAAAAAAGGAT 23 47 1 GGATAGTAGTCTCGATATAGAAGAAAATCAAG 25 25 0 GATTTTCTTGCTCGACATAGAAGTTTTTCATT 26 16 1 GCCTGTTTTGCTTTTTGTAAAAATACTTTTGC 26 157 1 CTTTGAAGAGCTTTCTCAAAAACCTAGTCACC 27 141 0 AGATCCCCTACTCTTTGAAGAGCTTTCTCAAA 27 153 0 CGTGGATATTCTTTACCAAAAATAGCCTCTTT 27 194 0 AAAGGGATTTTTCTCTTTAGAAAAAAAGCTCG 27 239 1 GCTGCAAACACTTTTTTTAAAAACTTATTTTC 28 20 1 TAACCCCTATTTTTGTCTAGAAGCAACCTATT 28 53 1 GGTTTTTTTTCTCTCTCTAAAGAG 29 2 0 **** * ***** MAP Score: 9.7612 Motif 12 TTTTTATTTTTAACAGGAAATTCTACATATAAA 0 39 1 TTAAACATTTGACAAGGAAACTCTTTACTCTAG 0 104 1 GTTTTTGATTTAGAAGGCATTTCGTTGGCTGTA 1 42 1 TATAGTAGCTGTGCAGGATGCTCAGTATGCTAA 1 88 1 TTCATCCCTAGCGCAGACTTTTCTAGATAAAGG 3 269 1 TAGGTGAAAGGAGAAGGATGCTCTCCTTCTCCT 4 18 0 CAAAATACATGCACAGGTTATTCAGCAAATCTC 6 173 1 CGCATTAATTGATCAGCCTCTTCATACAAGGCA 7 106 0 AGGGATCCTTTCGCAGGTATTTCTGAAAATGCT 11 15 1 CTATAACTTAGCTCAGCATTTTCAGAAATACCT 11 29 0 TAAGTTTTCTTCCAAGGAAGCTCCACTAGTAAA 22 17 1 GTAACTTCTAAGGGGATTCTTTTTCTCTC 24 6 1 TCCTCCAAGGAATTTCTTGATTTTCT 25 3 1 ATTTCAAAGAGCTAAGGCTTTTCTCGCAACATT 27 40 0 ** **** * *** MAP Score: 8.05537 Motif 13 CTTTAACTCCCGGATTCTTTTAAGGATTTT 0 12 1 GATTCTTTTAAGGATTTTTTATTTTTAACA 0 24 1 CTAGAGTAAAGAGTTTCCTTGTCAAATGTT 0 107 0 AGGAGAGTAGCAGATTCTTTATTATTGAGA 0 188 0 GTTGCTTTTCGGGCTTTTTTTCGTTGTTTT 3 60 1 AGGAGAAGGAGAGCATCCTTCTCCTTTCAC 4 18 1 GTCTTCAAAAGAGATTTTTTCCACGTTT 7 8 0 ACGTCTTTAGAAGCTTCTCTTGCCTTGTAT 7 86 1 GTATAGTTGAAGGCTTCTTTCATTTCGGAT 8 33 1 AAATCAGGGATCCTTTCGCAGGTATT 11 6 1 ATTTAACTCGGGGTATCTTTTTG 13 273 1 ACGAAGGGCCTCCCTTAAAGTAATAT 16 39 0 TTTACTAGTGGAGCTTCCTTGGAAGAAAAC 22 20 0 TTTTTGGTGTGGGATTTCTTAGCGTCAAGA 22 84 1 ATAATATACGGGGTCTCTTTGTCAGGGTTT 23 77 1 AACTTCTAAGGGGATTCTTTTTCTCTCATC 24 12 1 TAAAGGGGCTCCCTTACTAGCTTAC 24 48 0 AGAAAATCAAGAAATTCCTTGGAGGA 25 6 0 ATGGGCGGAAAGGCTTCCCTTTAGAAGGAG 26 220 1 TTTTAATCACCAGCCTCCTTCTAAAGGGAA 26 234 0 CAAAGAGCTAAGGCTTTTCTCGCAACATTT 27 39 0 AGCAAGATTAGGACTTCTCTGCTATCCTTA 27 86 0 AGATAAGGTCGAGCTTTTTTTCTAAAGAGA 27 250 0 GGGAAGCCGAAGGTTTTTTTTCTCTCTCTA 29 15 0 ********** MAP Score: 5.35462 Motif 14 CTTCTTGAGAGAGGAGAGTAGCAGATTCTT 0 199 0 AATATAGGAAGAAAAGAGAACAGAGAGAAC 3 94 0 TGCTCTTCCCAGAAAGAGTAAGAATAAAAC 3 239 1 TTTTCTAGATAAAGGAAGTAATA 3 287 1 AATCCGAAAGGAGAAGGAGAGCATC 4 5 1 ACCAATAGGTGAAAGGAGAAGGATGCTCTC 4 26 0 CTTCATACAAGGCAAGAGAAGCTTCTAAAG 7 90 0 TAACTTCGTAAAAGAGAGAGTATATTTTTT 10 91 0 ATGGCACAGGAGAAAGAGAGGCAAAAAGGA 11 133 1 AAGAGAGGCAAAAAGGAGAATAC 11 146 1 TAATTTTTAGGAGAGAGTGTT 15 9 1 TAAAGAAGGAAGAGAAGAATAAC 21 4 1 TCAAGATGAGAGAAAAAGAATCCCCTTAGA 24 16 0 GCTGGTGATTAAAAGAAGAATCAGTTTGCC 26 250 1 TTAAGCAACTGAAAAAAGTAAGGATAAGT 26 281 1 ATAAGTTTTTAAAAAAAGTGTTTGCAGCAT 28 18 0 TTTGCGATTCGGAAGAAGAGGGT 28 287 1 CTCTTTAGAGAGAGAAAAAAAACCTT 29 6 1 CGTGTTCGCCGGGAGAAGAATAGAGAGCAA 29 71 1 ********** MAP Score: 3.8854 Motif 15 CCCGGATTCTTTTAAGGATTTTTTATTTTTAA 0 20 1 GTTTTTGATTTAGAAGGCATTTCGTTGGCTGT 1 42 1 ACATTCTATGCGTAAGGGTTTTAGCATACTGA 1 109 0 GATTAGCATATCCAAGAGATTTATATCAAAGC 6 70 1 AGGGATCCTTTCGCAGGTATTTCTGAAAATGC 11 15 1 CGGGCCAAAGCCCAAGGGATTTTAAGTCCCTA 13 154 0 TAGTAAAACCTAGAACGATTTTTCAGGCTTTG 22 43 1 GGGGTCTCTTTGTCAGGGTTTTGC 23 86 1 TCCTCCAAGGAATTTCTTGATTTTC 25 3 1 GAGCTAGGGCTCAAAGGGATTTTTCTCTTTAG 27 227 1 TTTTGGGAAGCCGAAGGTTTTTTTTCTCTCTC 29 17 0 TATATTAGAGAAAAAGGTTTTTGGGAAGCCGA 29 35 0 ** **** **** MAP Score: 1.77119