AlignACE 3.0 10/20/99 AlignACE2 -i CY/CY_operons005_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944248194 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 ndhB 141 NADH dehydrogenase subunit 2 #1 phoA 74 alkaline phosphatase #2 hypothetical 42 hypothetical protein #3 ycf6 164 hypothetical protein #4 ndhD2 225 NADH dehydrogenase subunit 4 #5 hypothetical 214 hypothetical protein #6 hypothetical 111 hypothetical protein #7 ndhF 49 NADH dehydrogenase subunit 5 #8 ndhD 116 NADH dehydrogenase subunit 4 #9 ndhF 300 NADH dehydrogenase subunit 5 #10 ndhH 221 NADH dehydrogenase subunit 7 #11 hoxU 26 hydrogenase subunit #12 hypothetical 40 hypothetical protein #13 hoxF 76 hydrogenase subunit #14 potential 300 potential NAD-reducing hydrogenase subunit #15 ndhC 282 NADH dehydrogenase subunit 3 #16 psbG 71 NADH-ubiquinone oxidoreductase subunit PsbG #17 ndhD 300 NADH dehydrogenase subunit 4 #18 ycf34 96 Ycf34 #19 ndhF 118 NADH dehydrogenase subunit 5 #20 ndhD 164 NADH dehydrogenase subunit 4 #21 ndhF 244 NADH dehydrogenase subunit 5 #22 hypothetical 170 hypothetical protein #23 rbpA 300 RNA binding protein #24 ndhG 94 NADH dehydrogenase subunit 6 #25 ndhI 110 NADH dehydrogenase subunit NdhI #26 ndhA 254 NADH dehydrogenase subunit 1 Motif 1 TACGGATAGTGGAAGGGCAAAATTGGTTCACAAC 24 52 0 CGTAAGATAAAGGCTGGCAAAGCTTGTTTTTATT 3 120 1 AACAAGGTTAGGCGAGGAAAAACCTAGGTCAAAG 4 76 1 TGCTCCTTGGGGTCTGGAAAAACCGCAATGGGGG 21 17 1 GGCTGCCCAGGGTAGGGAAAAAACCCTAGGGATC 26 57 1 CCGGCTTTGTGGATTGCCAAAGTTGATTGGGAGG 21 61 0 TTTGCCCAATGGGATGGCTAAACCCCAGAGTCTG 6 33 0 AGGGGGGGCAGGCAAGGCAAGGACAATGGATTGG 16 27 0 ATCTTACGGCGATCGGGCAAAATTTTAAAGCTTG 3 94 0 ACTTAGAAAAAGTTAGGAAAAATTAATCTTTTCT 17 217 1 TAAAGGTTTAAGTCGGCCAAAGTTAGAAGCTGGG 25 58 0 CAAAGTTAGAAGCTGGGCTAAGACAAATTTCAGT 25 41 0 AGGGCGGCAAAAGGAAGTTTTGAT 26 0 1 CTGACAGCGAAACGCGGCAAAAATAACGCTCCGT 19 36 1 GATCGCCAGAAAATTGGCAAAAATTTAACAAGGT 4 50 1 GTGGTGGCACAAGAGGGCAAAATTCCCCCGCGTC 1 36 0 GAGTAGCGAAAAATAGGCAAAAATTGAGGTTTAC 18 71 1 AATTTAAGTTGGCTTGGTAAAAATTTAATTAGAT 20 111 0 CGAAAATTTGAGTTAGGTAAAGGTTGGTATAAGC 23 22 1 GCCCCTTTGGGGCCTGGATAAGATCAGCCATTTG 9 128 1 AAGATGATTGGGAGAGCCTAAACCAGGTAAATTT 14 240 0 GCCAGAACCCAGACAGGGAAAGCTAATACATCCA 9 173 0 CATGGCCATTGGGGAGGCAAGGCGGCATTACTGC 10 126 0 TCTGCGGGCCCGACCGGAAAAATCCCTGCTAGAT 17 248 1 CTGAGTTGTAGTAGTGGCAAAAGTAG 6 2 0 CCGACAACGGCGATCGCCAAAGTCAGAATTGAGG 21 140 1 TTTCACCCTTAGTCGGGAAAGAATTTGTGTGCCT 14 185 0 TCTGGTGGGAAATCGGGCTAAATCCTGTTCTCAT 22 82 1 TCGACATTGAAGAAAGCTAAAGATTTGCTCACTT 14 81 1 GGGTTCCGGCCACACGGCAAGAACCCCTAGGTTG 22 133 0 ** ******* * MAP Score: 28.6886 Motif 2 AAACGCCCGAGCTAATCTCCCCTGGAACCA 3 53 0 TAAAATTTTGCCCGATCGCCGTAAGATAAA 3 101 1 GAATTCTACTGGTAATCTCCTAGAGATCCG 4 14 1 AGATCCGCCAGGCGATCGCCAGAAAATTGG 4 37 1 CAATAGCAATGGCGATCGCCATAAAATCCC 5 55 0 CAATGGGATGGCTAAACCCCAGAGTCTGAG 6 31 0 GCTTGACTATGGTAATGCCCCTTTGGGGCC 9 112 1 ACTGCTCTTTGGTGATCCCCGCCGGCCTTT 10 101 0 GCCTTGCCTCCCCAATGGCCATGCCATATG 10 137 1 GGGGGGCAATGGCCCGAGGTTCCA 15 4 1 AATGCCCCCAGGCGATCGCCCACAAGTCCG 15 174 1 GTAGGCCAGTGGCGATCGCCGCCAGTCTAA 17 182 0 AATCAACTTTGGCAATCCACAAAGCCGGGG 21 67 1 TAACTCTATAGGTAAACCCCGGCTTTGTGG 21 83 0 TTCTGACTTTGGCGATCGCCGTTGTCGGTC 21 138 0 ********** MAP Score: 27.2508 Motif 3 AGGGGGCAATCATGCCATTACTGGG 0 3 1 TTTTGGGCCATGGCAAAGGGCCCCAGTAATGG 0 24 0 TTCTCCTTTGCGGCAAACCTGCGCTAAGCTTA 0 93 1 TGGCACAAGAGGGCAAAATTCCCCCGCGTCCG 1 34 0 CTTTATCTTACGGCGATCGGGCAAAATTTTAA 3 100 0 GCCAATTTTCTGGCGATCGCCTGGCGGATCTC 4 36 0 CCAATAGCAATGGCGATCGCCATAAAATCCCC 5 54 0 CCCAATGGGATGGCTAAACCCCAGAGTCTGAG 6 31 0 GGCCTTTTGGGGGAAACCGGCCTACAATATTC 10 76 0 GGGGGGCAATGGCCCGAGGTTCCAT 15 3 1 TTAATCGTTTGGGCAATAATCCAATTCTGAAA 15 68 0 CCGGACTTGTGGGCGATCGCCTGGGGGCATTC 15 173 0 AATTTCCTTTCGGAAAAAACGCCATAACTTCA 17 29 1 GGTAGGCCAGTGGCGATCGCCGCCAGTCTAAC 17 181 0 CGGGCCCGACCGGAAAAATCCCTGCTAGATTA 17 252 1 CCTTGGGGTCTGGAAAAACCGCAATGGGGGTC 21 21 1 ATTCTGACTTTGGCGATCGCCGTTGTCGGTCT 21 137 0 TATTTCTGGTGGGAAATCGGGCTAAATCCTGT 22 78 1 TCCGGCCACACGGCAAGAACCCCTAGGTTGAA 22 131 0 TGCCTGTCAATGGAAAAACGCGAAAAACCGTT 23 229 0 AGGGTGATTTCGGAGAAATGCCTGTCAATGGA 23 247 0 CCTCAGTTTTTGGAGAAAATCC 23 288 1 GATAGTGGAAGGGCAAAATTGGTTCACAACGA 24 50 0 GCCCAGGGTAGGGAAAAAACCCTAGGGATCTT 26 61 1 TTACAATAATCGGCAAGCTTGCTGAGCTGAGA 26 194 1 ****** * *** MAP Score: 23.9803 Motif 4 CCAGTAATGGCATGATTGCCCCCT 0 3 0 AAGCTTAGCGCAGGTTTGCCGCAAAGGAGAA 0 93 0 CACAAGAGGGCAAAATTCCCCCGCGTCCGTA 1 32 0 GATTAAACCTGGATTTCCCGTTGTTTAAG 2 8 1 AACGCCCGAGCTAATCTCCCCTGGAACCATC 3 51 0 CCAATAAAAACAAGCTTTGCCAGCCTTTATC 3 125 0 CTAATTATCCCAGGCCTCCCCCTCCATCAGG 5 25 1 TTTGGATGTATTAGCTTTCCCTGTCTGGGTT 9 171 1 ATCTTGTTAACAAAATTTCCCACAACCCCC 9 280 1 ATATTGTAGGCCGGTTTCCCCCAAAAGGCCG 10 78 1 GTAATGCCGCCTTGCCTCCCCAATGGCCATG 10 129 1 TGTGCCTCCACAATCTTGCCCACAATAACGA 14 161 0 ACACCTGGGTCAAGCTTACCGGACTTGTGGG 15 192 0 TTGTCCTTGCCTTGCCTGCCCCCCCTATTGT 16 35 1 CTAGTTTACCCCACACCTGAA 17 0 1 GCGATCGCCACTGGCCTACCCGCAACTTAGA 17 193 1 TTGGCCAAAACTAGTTTCCCCTGACAGCGAA 19 16 1 CGTTGTGAACCAATTTTGCCCTTCCACTATC 24 51 1 CTCTAGTAACCAGTCCTGCCCCTATCAAAAC 26 26 0 CTCAGCTCAGCAAGCTTGCCGATTATTGTAA 26 194 0 ******* *** MAP Score: 23.2498 Motif 5 GCCATGGCCCAAAACCAGGAAAATACTAATAAA 0 42 1 AAACAACGGGAAATCCAGGTTTAATC 2 3 0 AAAATTTAACAAGGTTAGGCGAGGAAAAACCTA 4 69 1 AGGCGAGGAAAAACCTAGGTCAAAGAACTTATT 4 85 1 TATTGGTACCAAAACAAGGATAGAATCTATGCA 5 80 1 TAAATTACATAACTAAAGGTAAATGATTGCCAA 5 123 1 AGACCAGCACAAACCCAGACCAATCAGGCCCGA 5 164 0 GCCCAAGACCAGGAAAATCAACTGCAA 8 4 1 AATCAACTGCAAGCCAAGGCCAATGAATGCAAT 8 25 1 ACTAAGGGTGAAAATCAGGCTAACTTTCGCAAT 14 206 1 TGGGAGAGCCTAAACCAGGTAAATTTGATTGCG 14 233 0 AACGATTAATAAGCATAGGTTAAACATATAGTT 15 91 1 GGGGGCAGGCAAGGCAAGGACAATGGATTGGTG 16 25 0 ACAGAGCTTAAAGCAAAGGTAAAGCGAATCTAA 17 117 1 CAACTTAGAAAAAGTTAGGAAAAATTAATCTTT 17 215 1 TAGAGTAGCGAAAAATAGGCAAAAATTGAGGTT 18 69 1 CTTGAAACCTTGGTTAACGAAGTTGCC 19 101 0 AGTTAGTTTTAAATCAAGATTAATTAGTTTTGA 20 21 0 AAATTTGATAAAAATTAGGTTAACATCAAGCAA 20 63 0 ATTTTCTGCGAACCCTAGGCGAAAATTCCTCGC 21 208 1 TTAACGGGTAAAGCCAAGGAATAAATCATCAAC 24 10 0 *** * **** ** MAP Score: 19.9184 Motif 6 TAAATTCCATCACCCATTCTAATTCTCCTTTGCGGC 0 71 1 CTTGTGCCACCACCCCTGTGATAACTT 1 57 1 CCCGAGCTAATCTCCCCTGGAACCATCATTGTCTCT 3 42 0 TCCTAGAGATCCGCCAGGCGATCGCCAGAAAATTGG 4 31 1 CAGGCCTCCCCCTCCATCAGGGGATTTTATGGCGAT 5 35 1 TACCCACCTCCCTCAGTTTGATTAATCTCCCC 6 89 0 GATTTACCTTCATCCAACTGACTTATCACCTCTTTT 8 86 1 TCTTATCCAGGCCCCAAAGGGGCATTACCATAGTCA 9 115 0 TGGATAAGATCAGCCATTTGGGCCGTCACTTTGGAT 9 142 1 AGGCCGGTTTCCCCCAAAAGGCCGGCGGGGATCACC 10 85 1 TGCCGCCTTGCCTCCCCAATGGCCATGCCATATGAT 10 133 1 TGGCAGAATGCCCCCAGGCGATCGCCCACAAGTCCG 15 168 1 AGCGGTGTTGCACCCCAAGGGATTACACCTGGGTCA 15 211 0 ACACCGCTGGACCCCCCCTGACCACCATTAGCCGTG 15 239 1 CCTTGCCTGCCCCCCCTATTGTCTTCTCCTATTTCC 16 44 1 GTGGCGATCGCCGCCAGTCTAACTTTTGTTCACACC 17 168 0 GGTTTTTCCAGACCCCAAGGAGCAACAATGT 21 5 0 CCCATTTTGACCCCCATTGCGGTTTTTCCAGACCCC 21 25 0 TCAAAATGGGCCTCCCAATCAACTTTGGCAATCCAC 21 51 1 AGGTTTTATTACCCCCGTTTAACTCTATAGGTAAAC 21 96 0 GGTAATAAAACCTCCCCCAGACCGACAACGGCGATC 21 119 1 CACGAAAGTTCCTCCCCCAGAGTAACCAGAAAAGAA 23 88 0 GTGTTACTATGCCCCCATAGAGTAATGATCGGTTGG 23 173 1 ATTTCAGTGACATCCCAGCTAATCTTTGTTGGAAGA 25 13 0 CGTTCTTCAAGATCCCTAGGGTTTTTTCCCTACCCT 26 65 0 GACACCACCGACCCCAAGAGAGCTATACCCTTCAAG 26 103 1 TCATTTCAACCCTCCCAGCGGACGGCACC 26 235 1 ****** ** * * MAP Score: 19.9184 Motif 7 TGGCAGAATGCCCCCAGGCGATCGCCCACA 15 168 1 AATAAAACCTCCCCCAGACCGACAACGGCG 21 122 1 CGGTGTTGCACCCCAAGGGATTACACCTGG 15 215 0 CTTATCCAGGCCCCAAAGGGGCATTACCAT 9 120 0 CGCCTTGCCTCCCCAATGGCCATGCCATAT 10 136 1 CCTTTTTTCTCCCCCAAAGCTAGAAACC 3 8 0 ACACCACCGACCCCAAGAGAGCTATACCCT 26 104 1 GGCCGGTTTCCCCCAAAAGGCCGGCGGGGA 10 86 1 TCCTAGAGATCCGCCAGGCGATCGCCAGAA 4 31 1 TTTTTCCAGACCCCAAGGAGCAACAATGT 21 9 0 GAAAGTTCCTCCCCCAGAGTAACCAGAAAA 23 91 0 TGTTACTATGCCCCCATAGAGTAATGATCG 23 174 1 GCCCAAGACCAGGAAAATCA 8 0 1 ATCGTTCTTTGCCCAATGGGATGGCTAAAC 6 44 0 TCTGGAAAAACCGCAATGGGGGTCAAAATG 21 29 1 CCGCTGGACCCCCCCTGACCACCATTAGCC 15 242 1 CGCAGGTTTGCCGCAAAGGAGAATTAGAAT 0 86 0 CTTTGCCATGGCCCAAAACCAGGAAAATAC 0 38 1 AGCAGTAATGCCGCCTTGCCTCCCCAATGG 10 125 1 ********** MAP Score: 19.129 Motif 8 CCTGGTTTTGGGCCATGGCAAAGGGCCCCAGTAAT 0 26 0 TTATCACAGGGGTGGTGGCACAAGAGGGCAAAATT 1 46 0 TTCTAGCTTTGGGGGAGAAAAAAGGGGATAGAGAC 3 13 1 GAATTCTACTGGTAATCTCCTAGAGATCCGCCAGG 4 14 1 CCAATTTTCTGGCGATCGCCTGGCGGATCTCTAGG 4 32 0 CCCTGATGGAGGGGGAGGCCTGGGATAATTAGGAT 5 22 0 CAATAGCAATGGCGATCGCCATAAAATCCCCTGAT 5 50 0 CATCCCATTGGGCAAAGAACGATGGCATTTGATAA 6 51 1 GCTTGACTATGGTAATGCCCCTTTGGGGCCTGGAT 9 112 1 ACTGCTCTTTGGTGATCCCCGCCGGCCTTTTGGGG 10 96 0 CATGGCCATTGGGGAGGCAAGGCGGCATTACTGCT 10 125 0 CCTCCCCAATGGCCATGCCATATGATTTGCTAAAG 10 143 1 GGGGGGCAATGGCCCGAGGTTCCATTCTA 15 4 1 CGGACTTGTGGGCGATCGCCTGGGGGCATTCTGCC 15 169 0 ATGGTGGTCAGGGGGGGTCCAGCGGTGTTGCACCC 15 232 0 GGGCAGGCAAGGCAAGGACAATGGATTGGTGGCCA 16 21 0 GGGAAATAGGAGAAGACAATAGGGGGGGCAGGC 16 48 0 GTAGGCCAGTGGCGATCGCCGCCAGTCTAACTTTT 17 177 0 GGATTTTTCCGGTCGGGCCCGCAGAAAAGATTAAT 17 238 0 AAACCGCAATGGGGGTCAAAATGGGCCTCCCAATC 21 36 1 TTCTGACTTTGGCGATCGCCGTTGTCGGTCTGGGG 21 133 0 CCGGCCACACGGCAAGAACCCCTAGGTTGAACTAA 22 127 0 GGTTACTCTGGGGGAGGAACTTTCGTGGTTCCATA 23 97 1 CCCAGGGTAGGGAAAAAACCCTAGGGATCTTGAAG 26 62 1 GGTGCCGTCCGCTGGGAGGGTTGAA 26 239 0 ***** * ** ** MAP Score: 19.0556 Motif 9 CCCCAGTAATGGCATGATTGCCCCCT 0 1 0 ATAAGCTTAGCGCAGGTTTGCCGCAAAGGAGAATT 0 91 0 GGCACAAGAGGGCAAAATTCCCCCGCGTCCGTAAA 1 30 0 TTGTCTCTATCCCCTTTTTTCTCCCCCAAAGCTAG 3 15 0 TCCTAATTATCCCAGGCCTCCCCCTCCATCAGGGG 5 23 1 GAATATTGTAGGCCGGTTTCCCCCAAAAGGCCGGC 10 76 1 GAGCAGTAATGCCGCCTTGCCTCCCCAATGGCCAT 10 124 1 GCGAAAGTTAGCCTGATTTTCACCCTTAGTCGGGA 14 201 0 ATGGAACCTCGGGCCATTGCCCCCC 15 0 0 CAGAAAAATTGGCAGAATGCCCCCAGGCGATCGCC 15 159 1 GGGGGGTCCAGCGGTGTTGCACCCCAAGGGATTAC 15 221 0 CACCGCTGGACCCCCCCTGACCACCATTAGCCGTG 15 240 1 CATTGTCCTTGCCTTGCCTGCCCCCCCTATTGTCT 16 33 1 GATTGGGAGGCCCATTTTGACCCCCATTGCGGTTT 21 36 0 GTCTGGGGGAGGTTTTATTACCCCCGTTTAACTCT 21 106 0 GTTTTTGTTCGCCGTCGTTCCACCAGTTTGATTCG 22 16 1 ACAGGATTTAGCCCGATTTCCCACCAGAAATACGG 22 75 0 *** ** ***** MAP Score: 18.2147 Motif 10 TGGTTTTGGGCCATGGCAAAGGGCCCCAGTAATGGCATGA 0 19 0 TTCTAATTCTCCTTTGCGGCAAACCTGCGCTAAGCTTATT 0 87 1 GGTTTCTAGCTTTGGGGGAGAAAAAAGGGGATAGAGACA 3 9 1 AATGATGGTTCCAGGGGAGATTAGCTCGGGCGTTTTGTCC 3 48 1 ACAACTCAGACTCTGGGGTTTAGCCATCCCATTGGGCAAA 6 27 1 TACACCATATCATAGGGGAAATAAAATTCCAGATCAACAA 9 30 0 ATCCAGGCCCCAAAGGGGCATTACCATAGTCAAGCGACAA 9 107 0 TAAGATCAGCCATTTGGGCCGTCACTTTGGATGTATTAGC 9 146 1 TGTTTTGCTTCCAATGGGCTGGAGCGGGGTGTGGTTTGAA 10 26 0 CCCCGCCGGCCTTTTGGGGGAAACCGGCCTACAATATTCA 10 75 0 TATGGCATGGCCATTGGGGAGGCAAGGCGGCATTACTGCT 10 125 0 GCTTACCGGACTTGTGGGCGATCGCCTGGGGGCATTCTGC 15 170 0 GTGTTGCACCCCAAGGGATTACACCTGGGTCAAGCTTACC 15 203 0 TAATGGTGGTCAGGGGGGGTCCAGCGGTGTTGCACCCCAA 15 229 0 CATTGTTGCTCCTTGGGGTCTGGAAAAACCGCAATGGGGG 21 11 1 GGAAAAACCGCAATGGGGGTCAAAATGGGCCTCCCAATCA 21 32 1 TTCTGCGAACCCTAGGCGAAAATTCCTCGCAATCCCAAGC 21 211 1 ATTAGTTCAACCTAGGGGTTCTTGCCGTGTGGCCGGAACC 22 126 1 TTTCTGGTTACTCTGGGGGAGGAACTTTCGTGGTTCCATA 23 92 1 CTTCAAGATCCCTAGGGTTTTTTCCCTACCCTGGGCAGCC 26 57 0 ACCATCAAAACTATTGGGACTATACTAAGCAGGTAAATTT 26 152 1 ** ***** * ** MAP Score: 17.1881 Motif 11 GCCCAAGACCAGGAAAATCAACTGCA 8 6 1 CATGGCCCAAAACCAGGAAAATACTAATAA 0 44 1 CCTGATATGGAACCACGAAAGTTCCTCCCC 23 107 0 CTGCGGGCCCGACCGGAAAAATCCCTGCTA 17 249 1 CCCCCAGAGTAACCAGAAAAGAATGGTACC 23 81 0 AACAAGGTTAGGCGAGGAAAAACCTAGGTC 4 76 1 CCAGAACCCAGACAGGGAAAGCTAATACAT 9 176 0 GGATAATTTAGACAACGAAAAAGTTGTTTT 14 40 0 ATAGGACTCCAACCAGGACAGACCAAGCCC 15 126 0 GCACCGAGTAAGCCGGAAAATTCTTCGGTG 9 222 1 GGGATGTTTGGACGGCGAAAGTGGAATCTT 9 255 1 AGTTTCCCCTGACAGCGAAACGCGGCAAAA 19 28 1 TTGAGCTTGTAACCAAGAAAAACCGCTTCA 17 87 1 GCCACCAGAAAAATTTTTCAAA 10 2 1 AGGTACAACCGAGAAATGCTCACGAA 0 125 0 GCCAGGCGATCGCCAGAAAATTGGCAAAAA 4 43 1 GGGCAGGCAAGGCAAGGACAATGGATTGGT 16 26 0 GATCTTGAAGAACGAGGACACCACCGACCC 26 87 1 AACTAGTTTTGGCCAAAAAAAG 19 2 0 AGGGCGGCAAAAGGAAGTTTTG 26 2 1 TTGGAAGCAAAACAACAAAACTTTGAATAT 10 52 1 AGTTGTTTTAAGCAACAAAAATAGTTCAAA 14 19 0 GACAGCGAAACGCGGCAAAAATAACGCTCC 19 38 1 ********** MAP Score: 15.1403 Motif 12 CTCTTGTGCCACCACCCCTGTGATAACTT 1 55 1 GCCCGAGCTAATCTCCCCTGGAACCATCAT 3 49 0 ATTATCCCAGGCCTCCCCCTCCATCAGGGG 5 28 1 AGTTTGATTAATCTCCCCAGGTTATCAAAT 6 77 0 CTGGAATTTTATTTCCCCTATGATATGGTG 9 38 1 GGATGTATTAGCTTTCCCTGTCTGGGTTCT 9 174 1 TTGTAGGCCGGTTTCCCCCAAAAGGCCGGC 10 81 1 ATGCCGCCTTGCCTCCCCAATGGCCATGCC 10 132 1 GAATTTGTGTGCCTCCACAATCTTGCCCAC 14 169 0 CCTGGTTTAGGCTCTCCCAATCATCTTTTA 14 247 1 ACACCGCTGGACCCCCCCTGACCACCATTA 15 239 1 TGCCTTGCCTGCCCCCCCTATTGTCTTCTC 16 42 1 ATCAATAACCGTTACCCCAGCACAGTTTGC 18 11 1 GCCAAAACTAGTTTCCCCTGACAGCGAAAC 19 19 1 GGGAGGTTTTATTACCCCCGTTTAACTCTA 21 105 0 GGGTAATAAAACCTCCCCCAGACCGACAAC 21 118 1 AATCATTTCAACCCTCCCAGCGGACGGCAC 26 233 1 ********** MAP Score: 12.4675 Motif 13 GCCATTACTGGGGCCCTTTGCCATGGCCCAAA 0 23 1 CGGACGCGGGGGAATTTTGCCCTCTTGTGCCA 1 34 1 GATTAAACCTGGATTTCCCGTTGTTTAAG 2 7 1 GTCTCTATCCCCTTTTTTCTCCCCCAAAGCTA 3 16 0 GATTAGCTCGGGCGTTTTGTCCCTGAGGCAAG 3 66 1 CAAATGCCATCGTTCTTTGCCCAATGGGATGG 6 50 0 TGACTTATCACCTCTTTTTGCC 8 104 1 GATAAGATCAGCCATTTGGGCCGTCACTTTGG 9 144 1 AATATTGTAGGCCGGTTTCCCCCAAAAGGCCG 10 77 1 ATTTTCAAAGGAGTTTTTGGCCA 11 13 1 GAAAGTTAGCCTGATTTTCACCCTTAGTCGGG 14 202 0 ATGGAACCTCGGGCCATTGCCCCCC 15 3 0 TTTCAGAATTGGATTATTGCCCAAACGATTAA 15 68 1 CTATTGTCTTCTCCTATTTCCC 16 59 1 TTGAAGTTATGGCGTTTTTTCCGAAAGGAAAT 17 30 0 TAATCTAGCAGGGATTTTTCCGGTCGGGCCCG 17 252 0 CTTTTTTTGGCCAAAACTAGTT 19 0 1 TGCACGGAGCGTTATTTTTGCCGCGTTTCGCT 19 41 0 GACCCCCATTGCGGTTTTTCCAGACCCCAAGG 21 21 0 GATTGGGAGGCCCATTTTGACCCCCATTGCGG 21 39 0 GGGATTGCGAGGAATTTTCGCCTAGGGTTCGC 21 215 0 ACAGGATTTAGCCCGATTTCCCACCAGAAATA 22 78 0 GGGAGAACGTGTTACTATGCCCCCATAGAGTA 23 165 1 CTAGTATTAACGGTTTTTCGCGTTTTTCCATT 23 221 1 TCGTTGTGAACCAATTTTGCCCTTCCACTATC 24 50 1 AGCCCAGCTTCTAACTTTGGCCGACTTAAACC 25 56 1 CCTATCAAAACTTCCTTTTGCCGCCCT 26 5 0 AAGATCCCTAGGGTTTTTTCCCTACCCTGGGC 26 61 0 ** ******** MAP Score: 8.32888 Motif 14 AGGGGGCAATCATGCCATTACTGGGGCCCTTTG 0 9 1 TACTGGGGCCCTTTGCCATGGCCCAAAACCAGGA 0 28 1 TAATTCTCCTTTGCGGCAAACCTGCGCTAAGCTT 0 90 1 TTTTGCCCTCTTGTGCCACCACCCCTGTGATAAC 1 48 1 TTAATCCTAATTATCCCAGGCCTCCCCCTCCATC 5 19 1 CTACTTTTGCCACTACTACAACTCAGAC 6 4 1 GGTTATACCATTGTCGCTTGACTATGGTAATGCC 9 97 1 CCTGTCTGGGTTCTGGCAGTCCCAGATTCCTAGC 9 190 1 CAAGATTCCACTTTCGCCGTCCAAACATCCCGGT 9 252 0 TGTTAACAAAATTTCCCACAACCCCC 9 284 1 AGAGCAGTAATGCCGCCTTGCCTCCCCAATGGCC 10 123 1 CACCGCTGGACCCCCCCTGACCACCATTAGCCGT 15 240 1 AATCCATTGTCCTTGCCTTGCCTGCCCCCCCTAT 16 29 1 CTAGTTTACCCCACACCTGAATTTCCTTT 17 5 1 TCAATAACCGTTACCCCAGCACAGTTTGCAGTTT 18 12 1 GACTTAGAGATTGTGCCTAAACTGCAAACTGTGC 18 30 0 CTAATTAAATTTTTACCAAGCCAACTTAAATTTA 20 113 1 CCCATTGCGGTTTTTCCAGACCCCAAGGAGCAAC 21 15 0 TCCCAATCAACTTTGGCAATCCACAAAGCCGGGG 21 63 1 GTAATAAAACCTCCCCCAGACCGACAACGGCGAT 21 120 1 AGGCGAAAATTCCTCGCAATCCCAAGCTCA 21 224 1 TCAAGACCTAATATCCCCAGCCGAGGGGAGAACG 23 140 1 TGTGAACCAATTTTGCCCTTCCACTATCCGTACC 24 54 1 AATCATTTGCTTATCCCAATCCCAAATCT 25 91 1 CCCTAGGGTTTTTTCCCTACCCTGGGCAGCCCTC 26 54 0 ** ***** ** * MAP Score: 8.07649 Motif 15 CCTGGTTTTGGGCCATGGCAAAGGGCCCCAGTAATGG 0 24 0 CTTTTTTCTCCCCCAAAGCTAGAAACC 3 0 0 AGGGACAAAACGCCCGAGCTAATCTCCCCTGGAACCA 3 53 0 CTCCTAGAGATCCGCCAGGCGATCGCCAGAAAATTGG 4 30 1 ATCGTTCTTTGCCCAATGGGATGGCTAAACCCCAGAG 6 37 0 TTATCCAGGCCCCAAAGGGGCATTACCATAGTCAAGC 9 112 0 ATCCCCGCCGGCCTTTTGGGGGAAACCGGCCTACAAT 10 80 0 CGCCTTGCCTCCCCAATGGCCATGCCATATGATTTGC 10 136 1 CCACATCTCTGCCGATAGCAGTTAACCGGGT 10 200 1 GTAGAATGGAACCTCGGGCCATTGCCCCCC 15 3 0 TTGGCAGAATGCCCCCAGGCGATCGCCCACAAGTCCG 15 167 1 CGGTGTTGCACCCCAAGGGATTACACCTGGGTCAAGC 15 208 0 AGGGCCAATGGTCTCCTCACGGCTAATGG 15 263 0 GTTGCGGGTAGGCCAGTGGCGATCGCCGCCAGTCTAA 17 182 0 TTTCTGCGGGCCCGACCGGAAAAATCCCTGCTAGATT 17 246 1 ATAACCGTTACCCCAGCACAGTTTGCAGTTTAGGCAC 18 15 1 CCATTTTGACCCCCATTGCGGTTTTTCCAGACCCCAA 21 23 0 TCCCCCAGACCGACAACGGCGATCGCCAAAGTCAGAA 21 131 1 AGGGTTCCGGCCACACGGCAAGAACCCCTAGGTTGAA 22 131 0 ACACCACCGACCCCAAGAGAGCTATACCCTTCAAGAA 26 104 1 ATTTCAACCCTCCCAGCGGACGGCACC 26 237 1 ***** ** * ** MAP Score: 5.86396 Motif 16 GAGGGCAAAATTCCCCCGCGTCCGTAAACTTTT 1 25 0 CCCCTTTTTTCTCCCCCAAAGCTAGAAACC 3 7 0 GGGATGGCTAAACCCCAGAGTCTGAGTTGTAGT 6 24 0 GGGGTTTAGCCATCCCATTGGGCAAAGAACGAT 6 41 1 TCTTATCCAGGCCCCAAAGGGGCATTACCATAG 9 118 0 CCAAAGTGACGGCCCAAATGGCTGATCTTATCC 9 143 0 GGGTTCTGGCAGTCCCAGATTCCTAGCACCGAG 9 197 1 CCACTTTCGCCGTCCAAACATCCCGGTCACCGA 9 246 0 TGTTGTTTTGCTTCCAATGGGCTGGAGCGGGGT 10 36 0 AGGCCGGTTTCCCCCAAAAGGCCGGCGGGGATC 10 85 1 GCCGCCTTGCCTCCCCAATGGCCATGCCATATG 10 134 1 GGTTTAGGCTCTCCCAATCATCTTTTATCTGCT 14 250 1 CCCAGGCGATCGCCCACAAGTCCGGTAAGCTTG 15 180 1 AGCGGTGTTGCACCCCAAGGGATTACACCTGGG 15 214 0 GCCTTGCCTGCCCCCCCTATTGTCTTCTCCTAT 16 43 1 ACTGGCGGCGATCGCCACTGGCCTACCCGCAAC 17 186 1 GGTTTTTCCAGACCCCAAGGAGCAACAATGT 21 8 0 CAAAATGGGCCTCCCAATCAACTTTGGCAATCC 21 52 1 GGTAATAAAACCTCCCCCAGACCGACAACGGCG 21 119 1 TCATTTCAACCCTCCCAGCGGACGGCACC 26 235 1 * ***** **** MAP Score: 5.76217 Motif 17 GCTTAGCGCAGGTTTGCCGCAAAGGAGAATTAGA 0 88 0 AGATCCGCCAGGCGATCGCCAGAAAATTGGCAAA 4 37 1 CTTCTATAGGGAAAATCTCAAAAAAAATTCTCAA 4 143 1 CAATAGCAATGGCGATCGCCATAAAATCCCCTGA 5 51 0 CAATGGGATGGCTAAACCCCAGAGTCTGAGTTGT 6 27 0 CAGGGAAAGCTAATACATCCAAAGTGACGGCCCA 9 160 0 CCCATTGGAAGCAAAACAACAAAACTTTGAATAT 10 48 1 ATTGTAGGCCGGTTTCCCCCAAAAGGCCGGCGGG 10 80 1 AAAGGCCGGCGGGGATCACCAAAGAGCAGTAATG 10 101 1 TTAGACTGGCGGCGATCGCCACTGGCCTACCCGC 17 182 1 AATCAACTTTGGCAATCCACAAAGCCGGGGTTTA 21 67 1 GACCGACAACGGCGATCGCCAAAGTCAGAATTGA 21 138 1 CCAGAAATACGGGTAGCTCAAAAAAGTTTCACTA 22 53 0 GAAAGCTAAGCTCGAAAATTTGAGTTAG 23 4 1 TCCTCCCCCAGAGTAACCAGAAAAGAATGGTACC 23 81 0 ATTCCTGATATGGAACCACGAAAGTTCCTCCCCC 23 106 0 CCTGTCAATGGAAAAACGCGAAAAACCGTTAATA 23 225 0 GGATTTTCTCCAAAAACTGAGGGAT 23 285 0 ** * * ****** MAP Score: 4.43702 Motif 18 GAAAAGTTTACGGACGCGGGGGAATTTTGCCC 1 24 1 TCTTGTGCCACCACCCCTGTGATAACTT 1 56 1 TGCCGCCTTGCCTCCCCAATGGCCATGCCATA 10 133 1 AATTGGCAGAATGCCCCCAGGCGATCGCCCAC 15 165 1 CAGCGGTGTTGCACCCCAAGGGATTACACCTG 15 216 0 GCCTTGCCTGCCCCCCCTATTGTCTTCTCCTA 16 43 1 CGGTTTTTCCAGACCCCAAGGAGCAACAATGT 21 10 0 GGTAATAAAACCTCCCCCAGACCGACAACGGC 21 119 1 CTATTTTCTGCGAACCCTAGGCGAAAATTCCT 21 206 1 CACGAAAGTTCCTCCCCCAGAGTAACCAGAAA 23 92 0 GACCTAATATCCCCAGCCGAGGGGAGAACGTG 23 144 1 GGGTTTTTTCCCTACCCTGGGCAGCCCTCTAG 26 51 0 GGGTAGGGAAAAAACCCTAGGGATCTTGAAGA 26 66 1 AGGACACCACCGACCCCAAGAGAGCTATACCC 26 101 1 GGTGCCGTCCGCTGGGAGGGTTGAAAT 26 237 0 ** **** **** MAP Score: 2.17048 Motif 19 TACTGGGGCCCTTTGCCATGGCCCAAAACCAGGA 0 28 1 GCTTTAAAATTTTGCCCGATCGCCGTAAGATAAA 3 97 1 TTTGCCAATTTTCTGGCGATCGCCTGGCGGATCT 4 37 0 TCCTAATTATCCCAGGCCTCCCCCTCCATCAGGG 5 23 1 TCAGGGGATTTTATGGCGATCGCCATTGCTATTG 5 51 1 AGATTGCATTCATTGGCCTTGGCTTGCAGTTGAT 8 26 0 AATGGCTGATCTTATCCAGGCCCCAAAGGGGCAT 9 126 0 AGATCAGCCATTTGGGCCGTCACTTTGGATGTAT 9 148 1 CCTGTCTGGGTTCTGGCAGTCCCAGATTCCTAGC 9 190 1 CAAGATTCCACTTTCGCCGTCCAAACATCCCGGT 9 252 0 CAAACCACACCCCGCTCCAGCCCATTGGAAGCAA 10 28 1 TCTTTGGTGATCCCCGCCGGCCTTTTGGGGGAAA 10 92 0 CACACCACATCTCTGCCGATAGCAGTTAACCGGG 10 196 1 ATTTACCTGGTTTAGGCTCTCCCAATCATCTTTT 14 242 1 AGAATGGAACCTCGGGCCATTGCCCCCC 15 4 0 GCAGAATGCCCCCAGGCGATCGCCCACAAGTCCG 15 170 1 ATTGTCCTTGCCTTGCCTGCCCCCCCTATTGTCT 16 34 1 GCGGGTAGGCCAGTGGCGATCGCCGCCAGTCTAA 17 182 0 AAATTAATCTTTTCTGCGGGCCCGACCGGAAAAA 17 236 1 CCCATTGCGGTTTTTCCAGACCCCAAGGAGCAAC 21 15 0 TCCCAATCAACTTTGGCAATCCACAAAGCCGGGG 21 63 1 TCAATTCTGACTTTGGCGATCGCCGTTGTCGGTC 21 138 0 GTGATCAGATTTTACGCTATCGCTGCCTCAATTC 21 165 0 AATTGCCTATTTTCTGCGAACCCTAGGCGAAAAT 21 200 1 AGGCGAAAATTCCTCGCAATCCCAAGCTCA 21 224 1 CACGTTCTCCCCTCGGCTGGGGATATTAGGTCTT 23 142 0 ATGATTTATTCCTTGGCTTTACCCGTTAAAGTAA 24 14 1 TGTGAACCAATTTTGCCCTTCCACTATCCGTACC 24 54 1 CCTCTAGTAACCAGTCCTGCCCCTATCAAAACTT 26 24 0 TTTTCCCTACCCTGGGCAGCCCTCTAGTAACCAG 26 44 0 *** *** **** MAP Score: 0.690373 Motif 20 TTTGGGCCATGGCAAAGGGCCCCAGTAATG 0 25 0 GCAGGTTTGCCGCAAAGGAGAATTAGAATG 0 85 0 TGGTACCAATAGCAATGGCGATCGCCATAA 5 61 0 TCGTTCTTTGCCCAATGGGATGGCTAAACC 6 43 0 TTATCCAGGCCCCAAAGGGGCATTACCATA 9 119 0 AAAGTGACGGCCCAAATGGCTGATCTTATC 9 144 0 TTGTTTTGCTTCCAATGGGCTGGAGCGGGG 10 37 0 GCCGGTTTCCCCCAAAAGGCCGGCGGGGAT 10 87 1 GGCGGGGATCACCAAAGAGCAGTAATGCCG 10 108 1 ATATGGCATGGCCATTGGGGAGGCAAGGCG 10 136 0 GGGGGGCAATGGCCCGAGGTTCCA 15 4 1 CGGTGTTGCACCCCAAGGGATTACACCTGG 15 215 0 AGGGCCAATGGTCTCCTCACGGC 15 269 0 CAGAGCTTAAAGCAAAGGTAAAGCGAATCT 17 118 1 TTTTTCCAGACCCCAAGGAGCAACAATGT 21 9 0 CTGGAAAAACCGCAATGGGGGTCAAAATGG 21 30 1 GTTACTATGCCCCCATAGAGTAATGATCGG 23 175 1 ********** MAP Score: 0.242964