AlignACE 3.0 10/20/99
AlignACE2 -i WIT_ctrl_PID033_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	943391173
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	modA	166	molybdate-binding periplasmic protein; permease

Motif 1
   TTCCCTGAATGCCCGCTTAGTCGGGCA	0	7	1
AGAAAAAGAAAATGCCCGACTAAGCGGGCA	0	19	0
CTTTTTCTCAACTTCCTGCTTTTCCTGCCG	0	41	1
AAAGGTTAGCAATAACTGCTGGGAAAATTC	0	94	1
          **********
MAP Score: 3.08487

Motif 2
   TTCCCTGAATGCCCGCTTAGTCGGGCATT	0	7	1
AGAAAAAGAAAATGCCCGACTAAGCGGGCATT	0	17	0
CTTTTTCTCAACTTCCTGCTTTTCCTGCCGAT	0	41	1
AAAGGTTAGCAATAACTGCTGGGAAAATTCCG	0	94	1
CTGCTGGGAAAATTCCGAGTTAGTCGTTATAT	0	109	1
          *** ** *****
MAP Score: 0.500736