AlignACE 3.0 10/20/99 AlignACE2 -i HI/HI_operons024_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944238251 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 HI0036 205 ABC transporter, ATP-binding protein #1 HI0058 70 3-deoxy-D-manno-octulosonate cytidylyltransferase (kdsB) #2 HI0059 72 conserved hypothetical protein #3 HI0060 40 ABC transporter, ATP-binding protein (msbA) #4 HI0061 258 recombination protein (rec2) #5 HI0663 300 ATP-binding transport protein (cydD) #6 HI1051 77 ABC transporter, ATP-binding protein #7 HI1052 111 transcriptional regulator, araC family, putative #8 HI1077 300 CTP synthetase (pyrG) #9 HI1157 71 ATP-binding protein protein (cydD) #10 HI1158 73 thioredoxin reductase (trxB) #11 HI1159 284 conserved hypothetical protein #12 HI1161 300 conserved hypothetical protein #13 HI1250 300 H. influenzae predicted coding region HI1250 #14 HI1252 162 ABC transporter, ATP-binding protein #15 HI1466.1 300 H. influenzae predicted coding region HI1466.1 #16 HI1467 58 ABC transporter, ATP-binding protein Motif 1 TGAAAAATAACCGCACTTTTTGTAAAAGGG 0 157 0 TTATTTTTCACCGCACTTTTATCTCGGATG 0 177 1 GTTATTTTATCCGCACTTATTAGAAAGGAT 2 47 1 ACTACTAACGCCACCCAATTCCACAACACC 5 96 0 CGATTTTTGACCGCACTTTTGGTTGATTTT 8 225 1 CTAACCAATTCCCCTCTTTTAACTCTTTTA 9 15 1 CTAAAATCTTCCGCACTTTGCTAAAATCAG 11 32 1 TCGCTCTTTTTCACAATTTA 11 274 0 AATCTTGGCTCCACCCATTTATGGGGGGA 12 9 0 TATCTTGGCTCCACCCATTTATGGGGGGAG 12 257 0 TACTTTCCTGCCACCCGTTTCGGGTGGTTT 13 195 1 TTAGGTTTCGCCAAACTTTTGCAAAATCTG 14 71 1 TCCTATATTTTCGCCCTATTTTCCAGTAGA 14 111 1 ACAAAAAAATTCGCCCTATTCTACTGGAAA 14 130 0 CAAACTGGCTTCGCTCTTTTTCTATTTATG 16 30 1 ********** MAP Score: 20.526 Motif 2 AACTCGCGTTTTCGATAATCAATAAA 2 5 0 GTCAGGAACAAACTAAAATAACAAGACAGGA 4 55 0 AAAATTGGGTTCCTAAAATAGCAGTCAGGAA 4 78 0 AAAATTTACTTGCTAAAACAAACAACTTCTG 4 127 0 TAATGATTACTCCTAAAATAAAAAG 5 4 0 TTAGGCGTTTATCTATCATCATAATGATTAC 5 25 0 TAATGATTACTCCTAAAATAAAAAGAAGTAT 5 217 0 TTAGGCGTTTATCTATCATCATAATGATTAC 5 238 0 TTTGTTTTTGTGCTATAATAATATGCACTTC 6 15 1 TAGGATGATTAGCTATAATCATTTATATTCC 8 260 1 GGGGAACTTTTTCTATAATCACGACCAAAAC 9 49 1 GGTAAAACGTTTCTAAAATCTTCCGCACTTT 11 20 1 TTCCGCACTTTGCTAAAATCAGCCATTATTT 11 40 1 AGATTAGAGGTTCTAAAATAAATAATGATAA 12 34 1 TAGATAATGTACCTAAAACAATTTAGGTTGA 12 193 1 TTATAAACATTTCTATAATCAAGCCCGAATT 15 76 1 * ********* MAP Score: 17.839 Motif 3 ATAACCGCACTTTTTGTAAAAGGGTCAAAAATTTTCGGTATT 0 139 0 AGGAACCCAATTTTTGCGGGCGGTATAAATATCAGAAGTTGT 4 95 1 CTTTTTATTTTAGGAGTAATCATTATGATGATA 5 1 1 TCGGGTGGTTTTTTTTATCTAAGTCGAAAGATGCACTCTTGC 13 214 1 TGCATACTTCTTTTTATTTTAGGAGTAATCATTATGATGATA 5 214 1 CAGCCATTATTTTTTTCACAAGGATAAAACATGGCTGATTTT 11 59 1 CTCTTGATGTTTTTAACTGCTTGAATAAGTATGTAGTGGCAT 8 41 1 GAAAAATTCGTTTTTGCGTGTAGAATAAACAACTTCAAATTC 13 12 0 GAACGTATCATTTTTTGAGTTTGGTTAAGGTTTTCAAAAAAC 0 59 0 CTGATTTTCCTTTTATCGTTGAGATCAACGAACAAAATCTTA 11 93 1 TAATGGCTGATTTTAGCAAAGTGCGGAAGATTTTAGAAACGT 11 26 0 TGATTTTAAAGTTGAGCACAAATTAAGTGACTGTT 15 3 1 CATATTTTAATATTTGTCTCAACCAACACATCTCTT 8 4 1 GGCTTCGCTCTTTTTCTATTTATGGAAAACTA 16 36 1 TGTTTTATTGGTTTTTTTGGTTGATTAATGTTTGATACATTA 15 115 0 ***** * ** ** MAP Score: 15.8625 Motif 4 CTTGTGAAAAAAATAATGGCTGATTTTAGCAAAGTGC 11 44 0 TCACAAGGATAAAACATGGCTGATTTTCCTTTTATCG 11 74 1 CCAACGCATAAAGAATCGGCGGATTTTTTGGCACTAC 11 189 1 CAGCCTCTCTAAGCCTAGGCTAGTTTTATTTAAATAT 4 212 0 ATTTTCCAGTAGAATAGGGCGAATTTTTTTGTGAGGA 14 128 1 AAGTGCGGATAAAATAACGCGAGTTTTTCAACTCGCG 2 28 0 GTGCGGTGAAAAATAACCGCACTTTTTGTAAAAGGGT 0 156 0 TAACTCTTTTAAAGAGGGGAACTTTTTCTATAATCAC 9 34 1 TGATTTTAGCAAAGTGCGGAAGATTTTAGAAACGTTT 11 24 0 CCCCACAAGCAGGGGAAGGCAAGTTTTTAAAACCTCT 12 82 0 ACAATACCGAAAATTTTTGACCCTTTTACAAAAAGTG 0 137 1 TTGCGCAATGAACTCAATGCTAGTTTTGGCTTAATCC 8 146 0 AAGGTACAATGCGTGCAATTTTTACTATTAGAT 3 6 1 *** *** **** MAP Score: 15.432 Motif 5 TCAAAAAATGATACGTTCGTCACATTTTTTCTTGCG 0 83 1 AGTGCGGTGAAAAATAACCGCACTTTTTGTAAAAGG 0 158 0 ACGCGAGTTGAAAAACTCGCGTTATTTTATCCGCAC 2 27 1 GGAAGTCGTGAAATCCACGCTTAATTCTGTATGTAT 4 22 0 TTATGATGATAGATAAACGCCTAATTAACACGGTGG 5 32 1 TTATGATGATAGATAAACGCCTAATTAACACGGTGG 5 245 1 CTGGTGTGGCAAATTATAGGCGGATTAGATTATGAT 7 44 1 TGATTATAGAAAAAGTTCCCCTCTTTAAAAGAGTTA 9 34 0 AACGTTTCTAAAATCTTCCGCACTTTGCTAAAATCA 11 25 1 CCTTGTGAAAAAAATAATGGCTGATTTTAGCAAAGT 11 46 0 GCCAACGCATAAAGAATCGGCGGATTTTTTGGCACT 11 188 1 CTTGTTTCCTATATTTTCGCCCTATTTTCCAGTAGA 14 105 1 TTCCTCACAAAAAAATTCGCCCTATTCTACTGGAAA 14 130 0 GTTTCTTTAAACACAGTCGGGGAATTTGCTATTGGA 15 226 1 AAATAGAAAAAGAGCGAAGCCAGTTTGCCCTAGGTT 16 21 0 * * ***** *** MAP Score: 14.2111 Motif 6 ACGAACGTATCATTTTTTGAGTTTGGTTAA 0 73 0 ACAATACCGAAAATTTTTGACCCTTTTACA 0 137 1 AAAATAACCGCACTTTTTGTAAAAGGGTCA 0 154 0 ACAATGCGTGCAATTTTTACTATTAGATAG 3 15 1 TTTAGGAACCCAATTTTTGCGGGCGGTATA 4 92 1 ACGGTTGCTTCAAATTTTGCGATCCATATC 4 178 0 GATACCAATCCATTTTTTGCTGTCAGCCAC 5 64 0 GACACCAATCCATTTTTTGCTGTCAGCCAC 5 277 0 TTATTTATCTCAATTTTTATCGCTAACATC 7 86 1 TTTTTGACCGCACTTTTGGTTGATTTTGTC 8 228 1 ACTGATTATAAACTTTTTGC 10 0 0 CACTTGTCATCAATTTTTACGCGCCAACGC 11 166 1 ATGCGAAATAAAATTTTGGAGTGATGAAAT 12 152 1 TTTACATCAACATTTTTGACAGAAAAATTC 13 45 0 GTTGGAAATTAAATTTTGGCTATAGCTACG 15 42 1 ********** MAP Score: 13.9358 Motif 7 TCCCCCCATAAATGGGTGGAGCCAAGATTAGAGG 12 1 1 TTCGGCAGCTCCCCCCATAAATGGGTGGAGCCAAGATAATTGA 12 249 1 CGGTGGCTGACAGCAAAAAATGGATTGGTGTCACG 5 275 1 CGGTGGCTGACAGCAAAAAATGGATTGGTATCACGGTGTTGTG 5 62 1 GATATTTATACCGCCCGCAAAAATTGGGTTCCTAAAATAGCAG 4 85 0 ATAAAAAAAACCACCCGAAACGGGTGGCAGGAAAGTAGTTTAG 13 189 0 GTTTTTAAAACCTCTAATAAGCAGAAGGCAAGTTATCATTATT 12 54 0 AGATCTGTGCCCACAACAAAGCGATTCGCAATATCTCCAATAG 15 254 0 TTTTACGCGCCAACGCATAAAGAATCGGCGGATTTTTTGGCAC 11 180 1 GTTATTTTATCCGCACTTATTAGAAAGGATTTTCT 2 47 1 CTACAGACAAAATCAACCAAAAGTGCGGTCAAAAATCGAAGAT 8 220 0 GGCTTCAGCCCACCNACAAACAGTCGTGAGATATTTTGGTGGG 5 135 1 CAACCAAAAAAACCAATAAAACACTTGGATTAACTGCTCGTAG 15 134 1 TAATAATTCCTCACAAAAAAATTCGCCCTATTCTACTGGAA 14 131 0 TATGAATATCAAGCAATCACTTGACGGGAGCTATGTTACTGAA 13 115 0 ** * * ** * ** * MAP Score: 12.147 Motif 8 TTCGTCACATTTTTTCTTGCGAAATTGAGCATA 0 98 1 CTTTTTATTTTAGGAGTAATCATTA 5 2 1 GCATACTTCTTTTTATTTTAGGAGTAATCATTA 5 215 1 TGCGTTGCCTTTCTTTTTAAGGAAAAGAT 6 58 1 GCTTAATCCTTTTTATCCTTGGAAAGGATCCAC 8 122 0 AGCCATTATTTTTTTCACAAGGATAAAACATGG 11 60 1 TGACAAGTGGTTTTTCCTAAGGATTGTTGCAGT 11 142 0 ATCAAGGACAATTTATTCTTGGAAAAGTAAATT 11 247 1 GGCTCCACCCATTTATGGGGGGA 12 0 0 AGTTATCATTATTTATTTTAGAACCTCTAATCT 12 34 0 GGCTCCACCCATTTATGGGGGGAGCTGCCGAAG 12 248 0 TTTATCATTATTTTATTTAGGAACTTTATGAAT 13 151 0 AAAGTGTCTATTTAATTTAGGGAATACTTCACT 14 20 1 TAGGGCGAATTTTTTTGTGAGGAATTATTA 14 142 1 TTCGCTCTTTTTCTATTTATGGAAAACTA 16 39 1 ****** * *** MAP Score: 11.7827 Motif 9 GGATTATATCCAAGTTGTTTTTTGAAAACC 0 43 1 GGATTAATCCCCAGTTGTTTTGATTGCTTG 1 12 1 ATAAATATCAGAAGTTGTTTGTTTTAGCAA 4 119 1 ATTTGCCACACCAGTTGGTTATTAATTCAA 7 28 0 AAATTGATGACAAGTGGTTTTTCCTAAGGA 11 152 0 CAGGGGAAGGCAAGTTTTTAAAACCTCTAA 12 80 0 TAGAATTTGAAGTTGTTTATTCTACACG 13 8 1 TAAATATTTACAAGTGGTTAGGTTTCGCCA 14 54 1 CAAAATCTGTCCACTTGTTTCCTATATTTT 14 92 1 GCAGTTAATCCAAGTGTTTTATTGGTTTTT 15 141 0 ACGTTGCTCTCCAGTTTGTTGCTCAATATC 15 187 0 ********** MAP Score: 11.1877 Motif 10 TGCTCAATTTCGCAAGAAAAAATGTGACGAAC 0 97 0 ATATTTATACCGCCCGCAAAAATTGGGTTCCT 4 95 0 ACACGGTGGCTGACAGCAAAAAATGGATTGGT 5 59 1 TGGGCTTCAGCCCACCNACAAACAGTCGTGAG 5 133 1 TGGGCTTCAGCCCACCAAAATATCTCACGACT 5 156 0 ACACGGTGGCTGACAGCAAAAAATGGATTGGT 5 272 1 GTGGATCCTTTCCAAGGATAAAAAGGATTAAG 8 122 1 TTATTTTTTTCACAAGGATAAAACATGGCTGA 11 65 1 ATCGTTGAGATCAACGAACAAAATCTTACTGA 11 107 1 TTTTTACGCGCCAACGCATAAAGAATCGGCGG 11 179 1 AATTTACTTTTCCAAGAATAAATTGTCCTTGA 11 248 0 TCCCCCCATAAATGGGTGGAGC 12 0 1 CTTCGGCAGCTCCCCCCATAAATGGGTGGAGC 12 248 1 TTGTTTATTCTACACGCAAAAACGAATTTTTC 13 22 1 CAAACATTAATCAACCAAAAAAACCAATAAAA 15 123 1 ****** * *** MAP Score: 10.4209 Motif 11 ATTTCGCAAGAAAAAATGTGACGAACGTATCATTTTTT 0 85 0 TAAAAGGGTCAAAAATTTTCGGTATTGTAGAGGCTATG 0 127 0 ACCCTTTTACAAAAAGTGCGGTTATTTTTCACCGCACT 0 156 1 ACGCGAGTTGAAAAACTCGCGTTATTTTATCCGCACTT 2 27 1 ATCTAATAGTAAAAATTGCACGCATTGTACCTT 3 5 0 TATGGATCGCAAAATTTGAAGCAACCGTTTGCATATTT 4 180 1 TCAGCCCACCAAAATATCTCACGACTGTTTGTNGGTGG 5 144 0 TAGAAATGGTAAAACGTTTCTAAAATCTTCCGCACTTT 11 13 1 GCACTTTGCTAAAATCAGCCATTATTTTTTTCACAAGG 11 44 1 ATCAACGAACAAAATCTTACTGAAATACTGCAACAATC 11 116 1 AAGTAGTGCCAAAAAATCCGCCGATTCTTTATGCGTTG 11 190 0 TAGAGGTTTTAAAAACTTGCCTTCCCCTGCTTGTGGGG 12 81 1 TGTAAATCAAAAAAACTCTCAATAGCATTTCCCTTGCC 13 69 1 CAGATTTTGCAAAAGTTTGGCGAAACCTAACCACTTGT 14 63 0 ATTCTACTGGAAAATAGGGCGAAAATATAGGAAACAAG 14 105 0 TTCCTCACAAAAAAATTCGCCCTATTCTACTGGAAAAT 14 128 0 **** ** * * * * MAP Score: 9.72798 Motif 12 TTAACACGGTGGCTGACAGCAAAAAATGGATT 5 56 1 TTTGTNGGTGGGCTGAAGCCCACCCTACAACT 5 123 0 ACGTAGAGTGGGCTTCAGCCCACCAAAATATC 5 164 0 TTAACACGGTGGCTGACAGCAAAAAATGGATT 5 269 1 AGGATAAAAAGGATTAAGCCAAAACTAGCATT 8 136 1 CCCCATAAATGGGTGGAGCCAAGATTAGAGGT 12 13 1 ACCTCTAATAAGCAGAAGGCAAGTTATCATTA 12 56 0 CCCCACAAGCAGGGGAAGGCAAGTTTTTAAAA 12 87 0 CCCCATAAATGGGTGGAGCCAAGATAATTGAT 12 261 1 TCAGTAACATAGCTCCCGTCAAGTGATTGCTT 13 116 1 ACAAGTGGTTAGGTTTCGCCAAACTTTTGCAA 14 63 1 TAACGTGCGTAGCTATAGCCAAAATTTAATTT 15 47 0 **** ****** MAP Score: 9.5119 Motif 13 ACAACTGGGGATTAATCCTT 1 0 0 TTCCTGAAAAATTTATTTTTACGATATGGA 4 156 1 AGAGGCTGGAATTAATCTTTTATAAAA 4 241 1 TTATTTTAGGAGTAATCATTATGATGATAG 5 14 1 TTATTTTAGGAGTAATCATTATGATGATAG 5 227 1 TTAATACTTAATTTATCATTCAACATTTGT 8 83 1 GCTTAATCCTTTTTATCCTTGGAAAGGATC 8 125 0 ATCAGCCATGTTTTATCCTTGTGAAAAAAA 11 68 0 CTGATTTTCCTTTTATCGTTGAGATCAACG 11 93 1 ATCAAGGACAATTTATTCTTGGAAAAGTAA 11 247 1 GCAGAAGGCAAGTTATCATTATTTATTTTA 12 47 0 GTTTAGCTATATTTATCATTATTTTATTTA 13 165 0 TGCATTGTGCATTTATTCTTATTATGATCA 13 253 1 ********** MAP Score: 9.10848 Motif 14 CTTTTATCTCGGATGGAATATTT 0 192 1 AAGGTACAATGCGTGCAATTTTTACTATTAGAT 3 10 1 TATTTATACCGCCCGCAAAAATTGGGTTCCTAA 4 93 0 GTTTGTTTTAGCAAGTAAATTTTCCTGAAAAAT 4 135 1 TTACGATATGGATCGCAAAATTTGAAGCAACCG 4 174 1 GGCTTAGAGAGGCTGGAATTAATCTTTTATAAA 4 234 1 CACGGTGGCTGACAGCAAAAAATGGATTGGTAT 5 60 1 CACGGTGGCTGACAGCAAAAAATGGATTGGTGT 5 273 1 CTCTTTTAAAGAGGGGAACTTTTTCTATAATCA 9 37 1 TTTTAGCAAAGTGCGGAAGATTTTAGAAACGTT 11 25 0 TTATGCGTTGGCGCGTAAAAATTGATGACAAGT 11 167 0 CTAATAAGCAGAAGGCAAGTTATCATTATTTAT 12 51 0 ACAAGCAGGGGAAGGCAAGTTTTTAAAACCTCT 12 82 0 GAATTTTTTTGTGAGGAATTATTA 14 148 1 CAACAAACTGGAGAGCAACGTATCCATAGTGTT 15 196 1 * * **** **** MAP Score: 8.14794 Motif 15 ATTTCACGACTTCCTGTCTTGTTATTTTAGTTTGTTCCTG 4 44 1 TTTTAGTTTGTTCCTGACTGCTATTTTAGGAACCCAATTT 4 68 1 AAAAAATGGATTGGTATCACGGTGTTGTGGAATTGGGTGG 5 76 1 ACCTCTAATCTTGGCTCCACCCATTTATGGGGGGA 12 5 0 TAATGATAACTTGCCTTCTGCTTATTAGAGGTTTTAAAAA 12 56 1 TTTTAAAAACTTGCCTTCCCCTGCTTGTGGGGGAAGGTGC 12 87 1 ATCAATTATCTTGGCTCCACCCATTTATGGGGGGAGCTGC 12 253 0 GCTAAACTACTTTCCTGCCACCCGTTTCGGGTGGTTTTTT 13 188 1 CAATAGCAAATTCCCCGACTGTGTTTAAAGAAACACTATG 15 220 0 ** ** * * ** ** MAP Score: 7.38884 Motif 16 AAGTGCGGATAAAATAACGCGAGTTTTTCAACTCG 2 30 0 CAGCCTCTCTAAGCCTAGGCTAGTTTTATTTAAAT 4 214 0 CTTAAAAAGAAAGGCAACGCAGGTTGCCTTTTAGA 6 44 0 TTGCGCAATGAACTCAATGCTAGTTTTGGCTTAAT 8 148 0 GTTTATAATCAGTAAAATGCAACTTATTGCATTAT 10 17 1 ACCTCTAATAAGCAGAAGGCAAGTTATCATTATTT 12 53 0 CCCCACAAGCAGGGGAAGGCAAGTTTTTAAAACCT 12 84 0 AAATAGAAAAAGAGCGAAGCCAGTTTGCCCTAGGT 16 22 0 ** ** ** **** MAP Score: 7.37179 Motif 17 TACAAAAAGTGCGGTTATTTTTCACCGCACTT 0 163 1 TGAAAAACTCGCGTTATTTTATCCGCACTTAT 2 35 1 ATAAATATCAGAAGTTGTTTGTTTTAGCAAGT 4 119 1 AGAGAGGCTGGAATTAATCTTTTATAAAA 4 239 1 TGTTAATTAGGCGTTTATCTATCATCATAATG 5 30 0 TGTTAATTAGGCGTTTATCTATCATCATAATG 5 243 0 AACCTGCGTTGCCTTTCTTTTTAAGGAAAAGA 6 54 1 ACTTTTGGTTGATTTTGTCTGTAGGATGATTA 8 239 1 ATTTCAGTAAGATTTTGTTCGTTGATCTCAAC 11 110 0 TAGAATTTGAAGTTGTTTATTCTACACGCA 13 8 1 ACGCAAAAACGAATTTTTCTGTCAAAAATGTT 13 35 1 ATGCTATTGAGAGTTTTTTTGATTTACATCAA 13 65 0 CGTTTCGGGTGGTTTTTTTTATCTAAGTCGAA 13 210 1 CTTGCATTGTGCATTTATTCTTATTATGATCA 13 251 1 AGAATAGGGCGAATTTTTTTGTGAGGAATTAT 14 138 1 ** *** ***** MAP Score: 6.33221 Motif 18 TATATCCAAGTTGTTTTTTGAAAACCTTAACC 0 47 1 TTCGTCACATTTTTTCTTGCGAAATTGAGCAT 0 98 1 TCACCGCACTTTTATCTCGGATGGAATATTT 0 184 1 CAGAAGTTGTTTGTTTTAGCAAGTAAATTTTC 4 127 1 CCTGAAAAATTTATTTTTACGATATGGATCGC 4 158 1 CTTTTTATTTTAGGAGTAATCATTA 5 3 1 TAATTAGGCGTTTATCTATCATCATAATGATT 5 27 0 CATACTTCTTTTTATTTTAGGAGTAATCATTA 5 216 1 TAATTAGGCGTTTATCTATCATCATAATGATT 5 240 0 TAATACTTAATTTATCATTCAACATTTGTAAT 8 84 1 GCTATAATCATTTATATTCCAATACAGATTAG 8 271 1 TCAGCCATTATTTTTTTCACAAGGATAAAACA 11 58 1 CAAGGACAATTTATTCTTGGAAAAGTAAATTG 11 249 1 TCGCTCTTTTTCACAATTTACTTTTC 11 268 0 GTTATCATTATTTATTTTAGAACCTCTAATCT 12 34 0 ACTCCAAAATTTTATTTCGCATATCCCTATAT 12 142 0 CAAAAACGAATTTTTCTGTCAAAAATGTTGAT 13 38 1 TTATCATTATTTTATTTAGGAACTTTATGAAT 13 151 0 GTAGTTTAGCTATATTTATCATTATTTTATTT 13 166 0 ATAGCCAAAATTTAATTTCCAACAGTCACTTA 15 33 0 GTATCAAACATTAATCAACCAAAAAAACCAAT 15 119 1 TTTATTTCTCATAAGATCTGTG 15 288 0 ******* *** MAP Score: 4.87401 Motif 19 GATACGTTCGTCACATTTTTTCTTGCGAAAT 0 92 1 TGAAAAATAACCGCACTTTTTGTAAAAGGGT 0 156 0 GTTGAAAAACTCGCGTTATTTTATCCGCACT 2 33 1 GTTATTTTATCCGCACTTATTAGAAAGGATT 2 47 1 ACGATATGGATCGCAAAATTTGAAGCAACCG 4 176 1 TCGCTCTTTTTCACAATTTAC 11 273 0 GAAAGTAGTTTAGCTATATTTATCATTATTT 13 171 0 TGGTTAGGTTTCGCCAAACTTTTGCAAAATC 14 68 1 TCCTATATTTTCGCCCTATTTTCCAGTAGAA 14 111 1 ACAAAAAAATTCGCCCTATTCTACTGGAAAA 14 129 0 TTTCCAACAGTCACTTAATTTGTGCTCAACT 15 19 0 ACAAAGCGATTCGCAATATCTCCAATAGCAA 15 251 0 CAAACTGGCTTCGCTCTTTTTCTATTTATGG 16 30 1 **** ****** MAP Score: 4.33091 Motif 20 ATTATATCCAAGTTGTTTTTTGAAAACCTT 0 45 1 CAAAAAGTGCGGTTATTTTTCACCGCACTT 0 165 1 ATTAATCCCCAGTTGTTTTGATTGCTTGCC 1 14 1 AAATATCAGAAGTTGTTTGTTTTAGCAAGT 4 121 1 ATTGATTTGTTTTTGTGCTATAAT 6 4 1 CGTCTTTGATAGCTAATTATCTTCGATTTT 8 202 1 CCGCACTTTTGGTTGATTTTGTCTGTAGGA 8 235 1 GATAAAACATGGCTGATTTTCCTTTTATCG 11 81 1 ATAAAGAATCGGCGGATTTTTTGGCACTAC 11 196 1 TAGAATTTGAAGTTGTTTATTCTACACGCA 13 10 1 ACCCGTTTCGGGTGGTTTTTTTTATCTAAG 13 207 1 AGTAGAATAGGGCGAATTTTTTTGTGAGGA 14 135 1 ********** MAP Score: 0.847331 Motif 21 GGGCTGAAGCCCACCCTACAACTACTAACGC 5 115 0 TGGGCTTCAGCCCACCNACAAACAGTCGTGA 5 133 1 TCCCCCCATAAATGGGTGGAGC 12 1 1 TAATATTTCATCACTCCAAAATTTTATTTCG 12 155 0 TGAACATTTATCCCCCCTCACCTTCGGCAGC 12 227 1 TTCGGCAGCTCCCCCCATAAATGGGTGGAGC 12 249 1 ATAAAAAAAACCACCCGAAACGGGTGGCAGG 13 201 0 CAAACATTAATCAACCAAAAAAACCAATAAA 15 123 1 ****** **** MAP Score: 0.48962 Motif 22 GATATTTATACCGCCCGCAAAAATTGGGTT 4 98 0 TGGGCTGAAGCCCACCCTACAACTACTAAC 5 117 0 TGGGCTGAAGCCCACTCTACGTTAAGTACG 5 174 1 TCCCCCCATAAATGGGTGGAG 12 1 1 TCGGGCACCTTCCCCCACAAGCAGGGGAAG 12 101 0 GAACATTTATCCCCCCTCACCTTCGGCAGC 12 228 1 TTCGGCAGCTCCCCCCATAAATGGGTGGAG 12 249 1 ********** MAP Score: 0.0830414