AlignACE 3.0 10/20/99
AlignACE2 -i MG/MG_operons006_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944238214
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MG109	59	serine/threonine protein kinase, putative
#1	MG115	24	conserved hypothetical protein
#2	MG122	39	DNA topoisomerase I (topA)
#3	MG364	63	conserved hypothetical protein

Motif 1
GGTGATATTGTTGAAAATAAGTATCAAATTG	0	15	1
ATTTAAAAGCTTTTCAATTTGATACTTATTT	0	29	0
ATTGAAAAGCTTTTAAATAGGGGTGGG    	0	42	1
GTTATTCCAATGCCTAATAAGGA        	1	2	0
ACTTACTTAACTATAAATAAGGTTTTTGT  	2	8	0
     TTAGGTTATTAATTAGTTTTAGAGTA	3	5	1
          ** ********
MAP Score: 3.41481