AlignACE 3.0 10/20/99
AlignACE2 -i MG/MG_operons006_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944238215
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MG109	59	serine/threonine protein kinase, putative
#1	MG115	24	conserved hypothetical protein
#2	MG122	39	DNA topoisomerase I (topA)
#3	MG364	63	conserved hypothetical protein

Motif 1
TATTTTCAACAATATCACCTATCT      	0	4	0
GATATTGTTGAAAATAAGTATCAAATTGAA	0	18	1
CCCACCCCTATTTAAAAGCTTTTCAATTTG	0	39	0
          ACAAAAACCTTATTTATAGT	2	0	1
TACTTACTTAACTATAAATAAGGTTTTTGT	2	10	0
         TAATAAAACTACTTACTTAAC	2	28	0
CTAAAACTAATTAATAACCTAA        	3	2	0
AATAATATACTCTAAAACTAATTAATAACC	3	13	0
TTCTAGTTACAATATAATCAAGATAATAAT	3	37	0
TTATATTGTAACTAGAACCATAT       	3	50	1
          **********
MAP Score: 6.34679