AlignACE 3.0 10/20/99
AlignACE2 -i MG/MG_operons020_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944238497
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MG369	68	conserved hypothetical protein
#1	MG377	46	conserved hypothetical protein
#2	MG378	28	arginyl-tRNA synthetase (argS)

Motif 1
          TTAAAATTTAAAATTATTGT	0	0	1
ATTATTGTGGTTATAAACTTCTTTTTTATC	0	22	1
TTTTTATCCCTTATAAGCTAGGGTTTTACT	0	44	1
TAAGCTAGGGTTTTACTTTAG         	0	57	1
CATATAGGAATTAAAATTTAATAAGTTTCT	1	20	1
      ATTTTTAGAAACTTATTAAATTTT	1	32	0
 TACTTTAAATTATATTTAATGATGCAAA 	2	9	0
          **********
MAP Score: 5.59526