AlignACE 3.0 10/20/99
AlignACE2 -i MG/MG_sum_all006_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944238857
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MG109	59	serine/threonine protein kinase, putative
#1	MG115	24	conserved hypothetical protein
#2	MG122	39	DNA topoisomerase I (topA)
#3	MG364	63	conserved hypothetical protein

Motif 1
      AGATAGGTGATATTGTTGAAAATA	0	4	1
TTCAATTTGATACTTATTTTCAACAATATC	0	18	0
CAAATTGAAAAGCTTTTAAATAGGGGTGGG	0	39	1
ACTATAAATAAGGTTTTTGT          	2	0	0
ACAAAAACCTTATTTATAGTTAAGTAAGTA	2	10	1
GTTAAGTAAGTAGTTTTATTA         	2	28	1
        TTAGGTTATTAATTAGTTTTAG	3	2	1
GGTTATTAATTAGTTTTAGAGTATATTATT	3	13	1
ATTATTATCTTGATTATATTGTAACTAGAA	3	37	1
       ATATGGTTCTAGTTACAATATAA	3	50	0
          **********
MAP Score: 6.34679