AlignACE 3.0 10/20/99 AlignACE2 -i MP/MP_sum_all001_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944247638 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 hisS 26 Mycoplasma pneumoniae, histidyl-tRNA synthetase; similar to Swiss-Prot Accession Number P30053, from S. equisimilis #1 tuf 84 Mycoplasma pneumoniae, elongation factor TU; similar to Swiss-Prot Accession Number P13927, from M. genitalium #2 rpsO 157 Mycoplasma pneumoniae, ribosomal protein S15; similar to Swiss-Prot Accession Number P05766, from B. stearothermophilus #3 MG422 45 Mycoplasma pneumoniae, MG422 homolog, from M. genitalium #4 rplM 30 Mycoplasma pneumoniae, ribosomal protein L13; similar to Swiss-Prot Accession Number P02410, from E. coli #5 rplL 37 Mycoplasma pneumoniae, ribosomal protein L7/L12 ('A' type); similar to Swiss-Prot Accession Number P02395, from M. luteus #6 rpsJ 117 Mycoplasma pneumoniae, ribosomal protein L10; similar to Swiss-Prot Accession Number P38518, from T. maritima #7 ackA 300 Mycoplasma pneumoniae, acetate kinase; similar to Swiss-Prot Accession Number P37877, from B. subtilis #8 clpB 175 Mycoplasma pneumoniae, ATP-dependent protease binding subunit ClpB; similar to GenBank Accession Number F64098, from H. influenzae #9 MG342 300 Mycoplasma pneumoniae, MG342 homolog, from M. genitalium #10 rpoB 92 Mycoplasma pneumoniae, RNA polymerase beta subunit; similar to Swiss-Prot Accession Number P37870, from B. subtilis #11 MG328 300 Mycoplasma pneumoniae, MG328 homolog, from M. genitalium #12 ctaD 300 Mycoplasma pneumoniae, cytochrome C oxidase polypeptide I homolog; similar to Swiss-Prot Accession Number P24010, from B. subtilis #13 MG319 88 Mycoplasma pneumoniae, MG319 homolog, from M. genitalium #14 come3 39 Mycoplasma pneumoniae, competence locus operon protein 3 homolog; similar to Swiss-Prot Accession Number P39695, from B. subtilis #15 MG313 116 Mycoplasma pneumoniae, MG313 homolog; similar to GenBank Accession Number L38997, from M. genitalium #16 hmw1 63 Mycoplasma pneumoniae, cytadherence accessory protein HMW1; similar to GenBank Accession Number L38997_6, from M. pneumoniae #17 rpsD 22 Mycoplasma pneumoniae, ribosomal protein S4; similar to Swiss-Prot Accession Number P21466, from B. subtilis #18 putative 300 Mycoplasma pneumoniae, putative lipoprotein, MG307 homolog, from M. genitalium #19 dnaK 55 Mycoplasma pneumoniae, heat shock protein DnaK; similar to GenBank Accession Number A49230, from E. rhusiopathiae #20 cbiO 157 Mycoplasma pneumoniae, abc transport ATP-binding protein; similar to Swiss-Prot Accession Number Q05596, from S. typhimurium #21 lysS 44 Mycoplasma pneumoniae, lysyl-tRNA synthetase; similar to Swiss-Prot Accession Number P37477, from B. subtilis #22 pgiB 21 Mycoplasma pneumoniae, phosphoglucose isomerase B; similar to Swiss-Prot Accession Number P13376, from B. stearothermophilus #23 fus 22 Mycoplasma pneumoniae, elongation factor G; similar to Swiss-Prot Accession Number P13551, from T. aquaticus #24 rpsG 53 Mycoplasma pneumoniae, ribosomal protein S7; similar to Swiss-Prot Accession Number P22744, from B. stearothermophilus #25 rpsL 28 Mycoplasma pneumoniae, ribosomal protein S12; similar to Swiss-Prot Accession Number P09901, from B. stearothermophilus #26 rplK 55 Mycoplasma pneumoniae, ribosomal protein L11; similar to Swiss-Prot Accession Number P29395, from T. maritima #27 oppB 275 Mycoplasma pneumoniae, oligopeptide transport system permease protein OppB; similar to Swiss-Prot Accession Number P24138 and P24691, from B. subtilis #28 rpsJ 93 Mycoplasma pneumoniae, ribosomal protein S10; similar to Swiss-Prot Accession Number P38518, from T. maritima #29 VXpSPT7_orf112 246 Mycoplasma pneumoniae, VXpSPT7_orf112 Protein #30 putative 121 Mycoplasma pneumoniae, putative lipoprotein, MG149 homolog, from M. genitalium #31 MG148 153 Mycoplasma pneumoniae, MG148 homolog, from M. genitalium #32 hlyC 25 Mycoplasma pneumoniae, hemolysin (hlyC) homolog protein; similar to GenBank Accession Number G64060, from H. influenzae #33 infB 280 Mycoplasma pneumoniae, protein synthesis initiation factor 2; similar to Swiss-Prot Accession Number P04766, from B. stearothermophilus Motif 1 GTGTTTGAATTACGTCTCTAATTTTACATAAGTTTG 1 58 0 GGTGGTTGTTTTGGTTTATTTATTATAAGTTTGGGGG 2 59 1 ACTGGGCTAATTTCTTATTTTGTTATAATTCAACAAG 2 121 1 TTTTATATTTACTTATTAATTATTTATGAGGGGT 5 13 0 ACTCAAGCCATTCGAGTGCTAATTTTATATAATTGGC 8 120 1 CCTTTCTTTGTTAATAGGCCAATTATATAAAATTAGC 8 137 0 CTTAATTTAATTTTTAGTTTTCTTTTTTGCAACCAAT 9 216 0 TCCGCTTTAATTAACAATTTTCTTTTATATAAATAGG 9 258 1 GTTAGTGGCTTTTTACTGTTATTTTTAGCCCTTTTTT 10 57 1 AACTTACAATTTCAAACGTTTTTTTTTTTTTTTTGAA 18 96 0 ATTTTGGCACTTTAAAAGCTAGTTTTTACCTAAAAAT 18 233 0 AAAGAGCAGTTTAACTGCCCTCTTTTTATTGATCTAC 20 21 0 ACTGCTCTTTTTTTATGTCTTATTTGACCTGTAATAA 20 48 1 CTTTAAGCACTTTTTAAACCATTTTTTCAATTAGTCT 20 99 1 TTTAAGTTTTTATTTTTAAATTTTAAAA 20 139 0 ATTTAAAAAATTATTATCTTAATTTTAAGCAATTA 21 8 0 TATCTTAAATTCCTTTTTTTACGAAAAACAT 24 4 1 GAGAACCAGGTTCCTTTTTCTTTTTTATTAGTATTCG 27 200 1 TTTTTTGCTGTTAGTAAGTTTCTTTTAACAATTAAAT 29 56 1 AGTTTGCCGCTTGCAGGCCTTATTATTTTCCCATAAT 29 168 0 CGGTTTTAAATTAGAGGCTTATTTTTAAAAATTCAAA 30 56 1 TATACTATCGTTGTATTACCTTTTTTATATATAAAGG 31 48 0 CCACCCGTAGTTGATGCTCTAATTTTACAAGACGCAA 33 91 0 CTTTAAAGTTTTTCCGCTCCAGTTTTAAAGCAGCTAC 33 169 0 ** *** ***** MAP Score: 25.6756 Motif 2 TAATTTAATTTTTAGTTTTCTTTTTTGCAACCAAT 9 216 0 GAGAACCAGGTTCCTTTTTCTTTTTTATTAGTATT 27 200 1 TATACTATCGTTGTATTACCTTTTTTATATATAAA 31 50 0 GAACTGACTAATTCCTTATCTTTTTCCAAACTAGT 29 202 0 AAGGTAAATAATTTAGCTTTTTGTTTAATCAG 31 7 1 TTTTATATTTACTTATTAATTATTTAT 5 20 0 GACGGTTTAATTATATTTGCTTATTTTGAATTTTT 30 82 0 TCATTGATTTTTGCTTGTGCTTTTTCCTTATAAAA 9 106 0 AGTACCACGCCTTCTTTATCTTTTTGTTTCCGTAT 15 37 1 CAATTCGCAATTTTTTTCACTTTATGGTAGATATG 11 186 1 TTTCAAACGTTTTTTTTTTTTTTTTGAAAGAAATT 18 89 0 TATCTTAAATTCCTTTTTTTACGAAAAAC 24 4 1 CATTAACTCAATCAATTAACTTTAT 24 38 1 ATAAGACCTTAATCATTGTCTTTTTTGTACTAGCT 7 104 0 GAGTGGGCTAAAGATTTACCTTTTTTGGTGGTTAT 8 79 0 CCACTCCTCATTACTTTTCCTTAATTCTTGAGCTT 9 167 0 ACAAGCAAAAATCAATGAACTTATTAAGTTGATCA 9 123 1 AACTCGTTATTTTCTTTGGTTTATTGCAGGTTAAT 6 30 0 AGGTGGTTGTTTTGGTTTATTTATTATAAGTTTGG 2 58 1 GGGAACTGTTATTGTTTCCCTTGTTGGTTCTAGGG 11 87 0 AACTAGCTTAATCTCTTGGCTTAATTTTGTACATT 18 154 0 GGTTCTTTTAAGTAGTCTTTTTAGGGTAGAAA 30 7 1 AGGTGAAACAATGGTTTAGCTGTTTTCTGCAAATT 31 102 0 TTTTATTTGACTACGTTTCTTTTTTTGAACAGGTA 7 30 1 AGAGGGCAGTTAAACTGCTCTTTTTTTATGTCTTA 20 35 1 CACATCCCCAAAAGGTGTGCTTTTTTAATTGATAC 12 14 1 TCTAAAGGTTAAATTTTTGCTTTATTTTGGCACTT 18 258 0 GACTGGGCTAATTTCTTATTTTGTTATAATTCAAC 2 120 1 AAATTTAAAAAATTATTATCTTAATTTTAAGCAAT 21 12 0 ** ** ****** MAP Score: 23.4018 Motif 3 ATAAAGCTGTAGAGAGGCTTATAATTCTTGG 1 25 0 ATTAACAAAACTGCTTATTATTCTAAT 4 13 0 TTTAAAGTTAAAAACTCGTTATTTTCTTTGG 6 46 0 TTTCATTTATAAAGACGGTTTTGAGTTACTT 8 12 0 TATAACCACCAAAAAAGGTAAATCTTTAGCC 8 78 1 AAAGACGCTTTATTAGAGTTG 9 0 1 TATCGTGATCAAAGGTGGTATATCATTCTGA 9 34 0 TCGTGTACAAAAAAGGGCTAAAAATAACAGT 10 71 0 ACTCATGCCCAAAACCCGTAACATTACCCTA 11 61 1 CACGCATGCAAAAACACCTAACGCTTTTCGA 12 85 1 GAAAAAAGAGCTTACAAAAGTGTA 16 49 0 TAGTTAGATAAAAGCAGGTTAGTTAAAGCAA 18 56 1 AAAAAAAAAAAAAAAACGTTTGAAATTGTAA 18 99 1 ATAAGTAAGAAAAACTGCTTTAGTGCCCACT 18 194 0 CTCAAACGCTAAAAGTGCTAACGATTTGTTT 19 12 1 AAATGGTTTAAAAAGTGCTTAAAGACGTCTA 20 92 0 GACTAATTGAAAAAATGGTTTAAAAAGTGCT 20 104 0 ATTAGTTTCCAAAAACGGTTTTAAATTAGAG 30 41 1 TATTCAGATAAAAGACGGTTTAATTATATTT 30 99 0 CTTTATATATAAAAAAGGTAATACAACGATA 31 49 1 TAATTTGCAGAAAACAGCTAAACCATTGTTT 31 101 1 GCACTGTTACAAAAACGCTTAAAGGTAAGCT 33 205 1 GCTCTGCGTCAGAACAGCTTACCTTTAAGCG 33 220 0 ***** ***** MAP Score: 20.9807 Motif 4 TCATCGTTTGTGCTATTGCAAAAATAATTTCTG 6 94 1 CATATCTACCATAAAGTGAAAAAAATTGCGAATT 11 187 0 TAAAAATAAGACTAATTGAAAAAATGGTTTAAAA 20 110 0 AATTTAACCTTTAGAGAGCAAAAACCGCGTTA 18 278 1 CATTGACAGTTATTAGAGAAAAAATGAGGACTTA 7 239 1 TAAAGTGCCAAAATAAAGCAAAAATTTAACCTTT 18 256 1 AAAGAAACTTACTAACAGCAAAAAAGCTCCAAGC 29 47 0 ATATTAACTGTATCAATTAAAAAAGCACACCTTT 12 24 0 ATTGAAATTAAACAACTTCAAAAAAGTAGTAACC 29 133 0 TTGAACAGGTAAATAATTCAAAAAACACAGGCGT 7 54 1 CGAAGACAAATTTAAAAAATTATTATCTT 21 25 0 TCAGTTCAATTGTGACTGCTAAAAGC 29 230 1 GCAATTTCCTTTATATATAAAAAAGGTAATACAA 31 41 1 ACAGGTCAAATAAGACATAAAAAAAGAGCAGTTT 20 46 0 ATAAATAGGATCAAAGATAAAAAA 9 286 1 AATAACTGTCAATGAGTGCTAAAACTTCATATAT 7 219 0 AAAGAAACGTAGTCAAATAAAAAAGTTTGGCGCT 7 18 0 TGATGATTGAAGCTAGTACAAAAAAGACAATGAT 7 94 1 AATCAACTAAAAAAAGGATTT 22 1 1 AAGGGCTAAAAATAACAGTAAAAAGCCACTAACA 10 56 0 ATAACGAGTTTTTAACTTTAAAAAAGTTATCGAG 6 55 1 GTTTTTATTTTTAAATTTTAAAAATAAGACTAAT 20 128 0 AATCAATTTCTTTCAAAAAAAAAAAAAAAACGTT 18 85 1 AAAAGACCCATTTAATTGTTAAAAGAAACTTACT 29 68 0 AATAATTAATAAGTAAATATAAAA 5 23 1 ATCTAATAGGTAACAATAATAAAATATTAGTAAT 7 272 0 AATTAAAGCTTTGAAAAGTTAAAATTTTCCCAAT 13 45 1 AAACTAATTAACCAATTAATAAAACAGC 14 21 1 TTTGCTTATTTTGAATTTTTAAAAATAAGCCTCT 30 68 0 TGGTTGCAAAAAAGAAAACTAAAAATTAAATTAA 9 218 1 TCTAGACCTTCAAACTATTAAAAACTAAGTACC 15 9 1 * * ******** MAP Score: 18.7828 Motif 5 GAATTTAAAGCGCCAAACTTTTTTATTT 7 8 1 CGGCTTAACTAGCGCAAACAAGTCCCAATG 29 11 1 GGGTGGATTTAGCGCAAACACTACCAGGTC 33 122 1 AAAGTAAAAGAGAGCCAACCCCCAAGTGCT 8 49 0 TAACCTTTAGAGAGCAAAAACCGCGTTA 18 282 1 TTTGCAGAAAACAGCTAAACCATTGTTTCA 31 104 1 ACTGTCAATGAGTGCTAAAACTTCATATAT 7 219 0 AAGTTCATAAACCGCAAACCGTTGATCTAA 11 278 1 GTGTGGTAATAACGCTAAACTAGCTCCCAC 26 30 0 TAGCTTTTAAAGTGCCAAAATAAAGCAAAA 18 249 1 TTAGCAATTAAGCGCTTACAAATTAAAATT 12 263 1 CACTCAAACGCTAAAAGTGCTAACGA 19 6 1 AAACTTACTAACAGCAAAAAAGCTCCAAGC 29 47 0 TTCAATTGTGACTGCTAAAAGC 29 234 1 CGCTAACACTGCCAAACCCAAACGTTT 27 258 0 GAAAAAAGAGCTTACAAAAGTGTAAG 16 47 0 TGTACAAAAAAGGGCTAAAAATAACAGTAA 10 69 0 TTCCCCACTTACAGCTTAACTTCCTTAATT 13 17 0 TGGTTTAAAAAGTGCTTAAAGACGTCTATA 20 90 0 GGTGTGGTCAAAAGCCAACCCCATGTTGAT 11 220 1 AAGGCCTGCAAGCGGCAAACTAGTTTGGAA 29 184 1 CTGCGTCAGAACAGCTTACCTTTAAGCGTT 33 218 0 GTGCCAAAATAAAGCAAAAATTTAACCTTT 18 260 1 CTGTTACAAAAACGCTTAAAGGTAAGCTGT 33 208 1 TTAAAACTGGAGCGGAAAAACTTTAAAGCA 33 178 1 ACGGCTTAACTAGCGCAAAC 29 0 1 ********** MAP Score: 16.7777 Motif 6 ATTCGCAATTTTTTTCACTTTATGGTAGATATG 11 188 1 AGCTTGGAGCTTTTTTGCTGTTAGTAAGTTTCT 29 46 1 AAATAACGAGTTTTTAACTTTAAAAAAGTTATC 6 53 1 TTTTTTATCTTTGATCCTATTTAT 9 286 0 GCGCCAAACTTTTTTATTTGACTACGTTTCTTT 7 19 1 AAATCCTTTTTTTAGTTGATT 22 0 0 AAAGGTTAAATTTTTGCTTTATTTTGGCACTTT 18 257 0 GGGTTGGCTCTCTTTTACTTTATAACCACCAAA 8 58 1 TACCACGCCTTCTTTATCTTTTTGTTTCCGTAT 15 39 1 ATTAAACCGTCTTTTATCTGAATAT 30 106 1 AAGGTGTGCTTTTTTAATTGATACAGTTAATAT 12 25 1 ACGTTTTTTTTTTTTTTTTGAAAGAAATTGATT 18 85 0 CTTAATTTAATTTTTAGTTTTCTTTTTTGCAAC 9 220 0 TTTGCTTGTGCTTTTTCCTTATAAAACTCATCA 9 99 0 CTCGTTATTTTCTTTGGTTTATTGCAGGTTAAT 6 30 0 ACCAGGTTCCTTTTTCTTTTTTATTAGTATTCG 27 204 1 TTTAAGTTTTTATTTTTAAATTTTAAAAA 20 138 0 CTGTTAGTGGCTTTTTACTGTTATTTTTAGCCC 10 55 1 AGTGCTGCTCTCTTTCATTTATAAAGACGGTTT 8 22 0 TAAAAGCTAGTTTTTACCTAAAAATAAGTATTG 18 225 0 AAGTCCTCATTTTTTCTCTAATAACTGTCAATG 7 239 0 AATAATTTAGCTTTTTGTTTAATCAGCAATTTC 31 16 1 AATTGATTGTTCTTTCTCTAACTGATCTAATTC 11 158 0 AACTAACCTGCTTTTATCTAACTATTTAAGTAA 18 47 0 CGCTTTCCCTTTCCTTTAAACAAGCAATAA 33 260 0 TATTTTATCCCCTTTCTTTGTTAATAGGCCAAT 8 151 0 GTTAAACTGCTCTTTTTTTATGTCTTATTTGAC 20 43 1 CTCCTCATTACTTTTCCTTAATTCTTGAGCTTT 9 166 0 ***** **** * MAP Score: 15.6984 Motif 7 ACTAACAATGTTTTTAGCGACTAAAATGCTGTTTG 27 50 1 TAGTAAGTTTCTTTTAACAATTAAATGGGTCTTTT 29 67 1 TCTCTTTTACTTTATAACCACCAAAAAAGGTAAAT 8 66 1 AGCAATTTCCTTTATATATAAAAAAGGTAATACAA 31 40 1 TTTGATCCTATTTATATAAAAGAAAATTGTTAATT 9 266 0 TGAGTTAATGTTTTTCGTAAAAAAAGGAATTTAAG 24 13 0 CTCAAAACCGTCTTTATAAATGAAAGAGAGCAGCA 8 18 1 TTGCTTGTGCTTTTTCCTTATAAAACTCATCAGTA 9 96 0 AGCCCCCAAACTTATAATAAATAAACCAAAACAAC 2 63 0 AAAAATTTAACCTTTAGAGAGCAAAAACCGCGTTA 18 275 1 TCATTGACAGTTATTAGAGAAAAAATGAGGACTTA 7 238 1 TATAATTGGCCTATTAACAAAGAAAGGGGATAAAA 8 147 1 ATTAGTCTTATTTTTAAAATTTAAAAATAAAAACT 20 128 1 AAATAACGAGTTTTTAACTTTAAAAAAGTTATCGA 6 53 1 TTAAGTAGTCTTTTTAGGGTAGAAATTAGTTTCCA 30 17 1 GTTATTCTCTTTTATCGTGATCAAAGGTGGTATAT 9 42 0 GCAATCAATTTCTTTCAAAAAAAAAAAAAAAACGT 18 83 1 TAATTAATTACTAATAACTATCAAAGTCATCT 2 7 0 CTTTCGAATACTAATAAAAAAGAAAAAGGAACCTG 27 206 0 TAGAGGCTTATTTTTAAAAATTCAAAATAAGCAAA 30 67 1 CTTTCCCTTTCCTTTAAACAAGCAATAATGTGATC 33 253 0 TAAAAACTAGCTTTTAAAGTGCCAAAATAAAGCAA 18 242 1 ****** * *** MAP Score: 13.4133 Motif 8 TGTTGATGTGTTAAACCACTTCGCTAACCA 11 243 1 GAGCGCCCCCTTAAACCACTTGGGTAAGTC 12 116 1 CGGAAAAACTTTAAAGCACTGTTACAAAAA 33 190 1 TTTGTACATTTTAAACCACGATGGCATGAC 18 134 0 AGCAGGTTAGTTAAAGCAATCAATTTCTTT 18 68 1 TAAGCACTTTTTAAACCATTTTTTCAATTA 20 102 1 ATCATTGAAATTAAACAACTTCAAAAAAGT 29 140 0 GTAGAATGTTTTGAACCACTAACAATGTTT 27 33 1 CTTATAATAAATAAACCAAAACAACCACCT 2 58 0 TTAACCTGCAATAAACCAAAGAAAATAACG 6 31 1 AAAGACGTCTATAAACCATTATTACAGGTC 20 73 0 TATAGACGTCTTTAAGCACTTTTTAAACCA 20 90 1 TTCTAAACTAATTAACCAATTAATAAAACA 14 17 1 TTATCTTAATTTTAAGCAATTA 21 2 0 GCTAAATATTATAAACAAATCGTTAGCACT 19 25 0 CCAATTATAATTAAACAAAG 0 16 1 AAATTGCTGATTAAACAAAAAGCTAAATTA 31 18 0 AAGTGCCAAAATAAAGCAAAAATTTAACCT 18 258 1 GGCCTTAAAGAAAGTTTTATAATC 16 4 1 ********** MAP Score: 9.99427 Motif 9 AACTGTCAATGAGTGCTAAAACTTCATATATT 7 218 0 GTGCTAACGAGTGGGCTAAAGATTTACCTTTT 8 90 0 ATGAGGAGTGGGTTGCTAAAGCGAAATTGGTT 9 191 1 AAGCGAAATTGGTTGCAAAAAAGAAAACTAAA 9 209 1 AAAGAAAATTGTTAATTAAAGCGGAGAAAACT 9 251 0 TCGTGTACAAAAAAGGGCTAAAAA 10 78 0 AACGAACAAAGTTTGCTCAAGCAACTCATGCC 11 38 1 TAGATATGGTGTGGTCAAAAGCCAACCCCATG 11 213 1 TCGAACCCACGCATGCAAAAACACCTAACGCT 12 78 1 GCTGTAAGTGGGGAATTAAAGCTTTGAAAAGT 13 32 1 TTGGTGATAAGCGGATTAAAACAGGAATAGAT 18 15 1 ATAAAAGCAGGTTAGTTAAAGCAATCAATTTC 18 63 1 TTGCACCAGTGGGCACTAAAGCAGTTTTTCTT 18 187 1 TTAACCTTTAGAGAGCAAAAACCGCGTTA 18 281 1 TTTAAAACTGGAGCGGAAAAACTTTAAAGCAC 33 177 1 * * ******** MAP Score: 6.23321 Motif 10 TGGCTTGAGTGCTAACGAGTGGGCTAAAGATTTACCTT 8 92 0 TTTCGCTTTAGCAACCCACTCCTCATTACTTTTCCTTA 9 179 0 TTTCTTTTTTGCAACCAATTTCGCTTTAGCAACCCACT 9 197 0 TCTAGACCTTCAAACTATTAAAAACTAAGTACCACGC 15 9 1 CCTGCTTTTATCTAACTATTTAAGTAAATCTATTCCTG 18 36 0 GTTAGTTAAAGCAATCAATTTCTTTCAAAAAAAAAAAA 18 73 1 CGCTAAAAGTGCTAACGATTTGTTTATAATATTTAGCA 19 18 1 TGTTAGTGGTTCAAAACATTCTACAAAAAAACGATACT 27 19 0 CCTGCAAGCGGCAAACTAGTTTGGAAAAAGATAAGGAA 29 188 1 GTTTCACCTGGCAAACAATTTAAAGTTAATGCCAT 31 128 1 TCGTTAATCTAACCATTTCACACTATGCAAAGTTG 33 7 1 TAGCGGCTTAGCAAAAGACTTTCTGGTAACTAAACATT 33 50 0 ****** * * ** MAP Score: 4.86611 Motif 11 AATTAGAATAATAAGCAGTTTTGTTAAT 4 12 1 TTTCATTTATAAAGACGGTTTTGAGTTACTT 8 12 0 AAAGACGCTTTATTAGAGTTG 9 0 1 TGTTAGATCAACGGTTTGCGGTTTATG 11 283 0 ATAGTTAGATAAAAGCAGGTTAGTTAAAGCA 18 55 1 ATAAGTAAGAAAAACTGCTTTAGTGCCCACT 18 194 0 TGGCACTTTAAAAGCTAGTTTTTACCTAAAA 18 235 0 TTAGAGAGCAAAAACCGCGTTA 18 288 1 GACTAATTGAAAAAATGGTTTAAAAAGTGCT 20 104 0 AACGCGATTTATAATCGGTTTCCACTCGGAG 27 86 0 GAGGGACCTGAGAACCAGGTTCCTTTTTCTT 27 191 1 AAGATCGCCAAAAAGCGGGGTTACTACTTTT 29 115 1 CTGCAAGCGGCAAACTAGTTTGGAAAAAGAT 29 189 1 ATTAGTTTCCAAAAACGGTTTTAAATTAGAG 30 41 1 TATTCAGATAAAAGACGGTTTAATTATATTT 30 99 0 **** ****** MAP Score: 3.06462