AlignACE 3.0 10/20/99
AlignACE2 -i MP/MP_sum_all020_100.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944248595
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MG294	130	Mycoplasma pneumoniae, MG294 homolog, from M. genitalium

Motif 1
AATAATGGCGTAATTTCGTTGTGTCACA  	0	112	1
ATTACGCCATTATTTTAGTGGTAATTATGG	0	96	0
AACGTTTTTCTAATTTATTTTTTGGCAAGC	0	52	1
TTTTTGGCATACATTTATTGCAAAAAGTGA	0	24	0
          **********
MAP Score: 1.41267

Motif 2
AAGTGAGAGGAAAACCGTAT          	0	0	0
ACTTTTTGCAATAAATGTATGCCAAAAACG	0	26	1
AATGTATGCCAAAAACGTTTTTCTAATTTA	0	39	1
GTTAGCTTGCCAAAAAATAAATTAGAAAAA	0	56	0
TTTTGGCAAGCTAACCGGATTAACCCCATA	0	71	1
          **********
MAP Score: 0.345088