AlignACE 3.0 10/20/99 AlignACE2 -i PH/PH_operons001_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944255146 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 PH0002 233 155aa long hypothetical transcription termination-antitermination factor #1 PH0092 99 821aa long hypothetical phosphoenolpyruvate synthase #2 PH0397 58 395aa long hypothetical protein #3 PH0398 65 334aa long hypothetical protein #4 PH0399 21 229aa long hypothetical protein #5 PH0627 54 250aa long hypothetical protein #6 PH0628 42 295aa long hypothetical methionyl aminopeptidase #7 PH0974 300 356aa long hypothetical dipeptidase #8 PH1149 89 351aa long hypothetical X-Pro dipeptidase #9 PH1242 48 262aa long hypothetical pseudouridylate synthase #10 PH1483 36 102aa long hypothetical 30S ribosomal protein S10 #11 PHS044 244 82aa long hypothetical DNA-directed RNA polymerase subunit Hprotein #12 PH1547 286 206aa long hypothetical protein #13 PH1641 101 148aa long hypothetical 30S ribosomal protein S13 #14 PH1642 54 198aa long hypothetical protein #15 PH1705 300 342aa long hypothetical protein #16 PH1706 76 411aa long hypothetical translation initiation factor eIF-2 gamma #17 PH1753 77 196aa long hypothetical adenylate kinase #18 PH1754 33 468aa long hypothetical preprotein translocase secY subunit #19 PH1771 194 127aa long hypothetical protein #20 PH1779 139 258aa long hypothetical protein #21 PH1780 115 285aa long hypothetical protein #22 PH1781 54 134aa long hypothetical protein #23 PH1782 300 399aa long hypothetical protein #24 PH1822 94 205aa long hypothetical protein #25 PH1899 284 735aa long hypothetical elongation factor 2 #26 PH1900 42 334aa long hypothetical protein #27 PHS057_PH1901 118 PHS057: 86aa long hypothetical 50S ribosomal protein L37, PH1901: 282aa long hypothetical dehydrogenase #28 PH1902 49 365aa long hypothetical protein Motif 1 ACGTAATCCCCCGAAATATTTTTACACCAAATCA 5 30 0 GAATTGCCCCCCAAAAGTTTTTTAAGATGAACAT 11 217 0 CTATTTTATTCAAAAAATTTTATAATGTTCCCAA 8 49 1 GGCTCAAATTCCGAAAAGTTTATATATCTCTATT 23 17 0 TAAATCTTTCCATAAATTTTTATAGAATAGAACT 28 22 1 TTGAAGTGAGCATAAATATTTATAAACCTAGTTC 27 64 1 GTATTTTTCTCCGAAAGATTTATATACTAACTTC 12 30 1 TTAACTTTTACGTCAAGCTTTTTAACTATTTTGG 14 24 1 CTTTTCTTAAAATTTTTAAATTAAATAAC 0 5 1 ATGGCTTTTGCAAAAATTTTTTAAGAATTATCAA 20 22 1 CATTACTTTGCAAAAGTTTTTTTAAAATATTCAT 3 27 1 TGGAAACCTTCGAAAGCCTTTTAAATCTTTTATA 20 66 1 AATTCACCCCCCAGATTTTATAGCTCCCAGGG 24 72 0 TCCTCCTTTTCCGAAGTATTTAAATATAAGTAGT 24 21 0 TATAGAACTCCAGAAAAATTCTTAAATGCTTTAA 15 193 1 AATTATTATCCTTCAGAATTTTAATAAAAAGGAA 17 16 0 ACGTGAATTGCTTAAAAGATTTTAAAAAGTTATT 15 256 0 TAAAGAGTAGCACTAAAATTTTTAACATTATCTT 2 31 0 AATTAAAGACCTTCAAAAATTTTATTTGGGGGAG 23 229 1 TTCTCCCATTCCTCAAATTTCAAA 15 0 0 CAACATTTTTCAATAAGATTTAAATATGGTTCTC 21 72 1 CCTCCAAGCATTAAAATTCCTATAA 0 218 0 TTAAATCACCCCAAGAATTAAAGAAAAGGGAA 10 14 0 GCTATGATTTCTAAAATTATCTTATTTTTATCCC 25 105 0 * *** ****** MAP Score: 30.8107 Motif 2 GTAATACAGAACTAACCCCAGGAGGATCCAGAATA 7 143 0 TTAATCCTTAATAAATCTCGGGAGGTTGCGAG 9 7 0 GTGACCCGGGTTCAAATCCCGGCGGCCCCACCAAT 12 205 1 CCTGGGAGCTATAAAATCTGGGGGGTGAATT 24 73 1 TCTGTATTCGAAGAATCTTCGGCGGTGCCCCGGTG 11 37 1 CCTGGTAACGAAGAAGCCCGGATGGGAGGAGTACA 0 117 1 GTTCATCTTAAAAAACTTTTGGGGGGCAATTCTCC 11 219 1 ACCCTAAAAAATAAATTTTAGGAGG 18 0 0 TTATAGGAATTTTAATGCTTGGAGG 0 218 1 ACGGATCAACAAACACTTCTGGAGGCGAGGAGGT 16 52 1 TTGGTCTAAGAAAATCTCTCGGAGGGCAACA 20 118 1 GGTCCCGGGTTCAAAGCCCGGCCGGGGCTCCATTC 11 108 1 GGACGGGGATTTGAACCCCGGCGGGCAAACGCCCA 13 39 0 ACGGCCCCGCTGGAGCCCCGGGCGGGATTTGAACC 12 133 0 TTTAAGAATTATCAATCTTCGAGGGTGGAAACCTT 20 41 1 TTCCTTTTTATTAAAATTCTGAAGGATAATAATTT 17 16 1 ATTTGGTGTAAAAATATTTCGGGGGATTACGT 5 32 1 TTAAATAACCATCAAGTTGTGGGGGTAGGAGATGC 0 30 1 CTCCCCCAAATAAAATTTTTGAAGGTCTTTAATTC 23 228 0 TTAAAAGTATTAAAACCCTGGGAGCTATAAAATCT 24 57 1 GGCCATTCAAGACCGCCTGGAGGGATAATAACT 7 8 1 CTTAACAGCGTGAAATTTCTGGGGCTTAGCTGAAT 23 99 1 CCAGAATTTCACTCAATCTGGAGGGGGATAAA 13 79 1 TGATCCTTGCTATATCCTCGGAGGGAAAC 25 4 0 GTGCCCCGGTAGCCTAGCCTGGTGGGGCGGGGGAC 12 79 1 AACTTCCTTTTCCATCTCTCGGTGCCCCGGTAGCC 12 58 1 * ** *** ** ** MAP Score: 29.1498 Motif 3 CCGGTAGCCTAGCCTGGTGGGGCGGGGGACTT 12 84 1 CCGGGTTCAAAGCCCGGCCGGGGCTCCATTCT 11 112 1 CATATTCTGGATCCTCCTGGGGTTAGTTCTGT 7 141 1 GAAATTCTGGCGCCGGGACGGGGATTTGAACC 13 57 0 GCGGGTTCAAATCCCGCCCGGGGCTCCAGCGG 12 130 1 CGTGGGCGTTTGCCCGCCGGGGTTCAAATCCC 13 37 1 CCTGATAAGCTTGCTCGGGTTTACTTAAA 25 265 0 TACCAGGCTGAGCCACCGGGGCACCGCCGAAG 11 53 0 GTAACGAAGAAGCCCGGATGGGAGGAGTACAA 0 121 1 TACTAATTTTAGCTATGTGGGGCTAGAAA 12 267 1 TCCTTGCTATATCCTCGGAGGGAAAC 25 4 0 CCGCCCGGGGCTCCAGCGGGGCCGTAGGGTAG 12 143 1 CCGGGTTCAAATCCCGGCGGCCCCACCAATTT 12 210 1 CTAAGAAAATCTCTCGGAGGGCAACA 20 123 1 AGAATTATCAATCTTCGAGGGTGGAAACCTTC 20 45 1 CATTCAAGACCGCCTGGAGGGATAATAACTGG 7 13 1 CAGATTTTATAGCTCCCAGGGTTTTAATACTT 24 61 0 CTGATTCTTCTGCCATGCGGGGAACTGTTAAT 25 141 1 ATTTCACTCAATCTGGAGGGGGATAAA 13 84 1 GAGTAGGATTAGCTTCGAGAGGGATAAAAATA 25 85 1 GAGCTATAAAATCTGGGGGGTGAATT 24 78 1 AGCTTGGCCCATCCTGCGGGCTTTGGGAGCCC 12 173 1 GGGCCTTGAGAGCCCGTGGGCGTTTGCCCGCC 13 23 1 GATGCCAGAGTTCCAGGAGAGGGTCAGGAACT 0 60 1 TATTCGAAGAATCTTCGGCGGTGCCCCGGTGG 11 41 1 TCCTTAATAAATCTCGGGAGGTTGCGAG 9 6 0 **** ** **** MAP Score: 26.6561 Motif 4 CTTCGGCGGTGCCCCGGTGGCTCAGCCTGGTAGAGCGGCCGCT 11 53 1 TAAGCGGCAGGTCCCGGGTTCAAAGCCCGGCCGGGGCTCCATT 11 99 1 ATCTCTCGGTGCCCCGGTAGCCTAGCCTGGTGGGGCGGGGGAC 12 71 1 TAATCCCCAGGTCGCGGGTTCAAATCCCGCCCGGGGCTCCAGC 12 117 1 GCTACCCTACGGCCCCGCTGGAGCCCCGGGCGGGATTTGAACC 12 133 0 GGGAGCCCGTGACCCGGGTTCAAATCCCGGCGGCCCCACCAAT 12 197 1 GGCCTTGAGAGCCCGTGGGCGTTTGCCCGCCGGGGTTCAAATC 13 24 1 CTGGCGCCGGGACGGGGATTTGAACCCCGGCGGGCAAACGCCC 13 40 0 * *** * ** ** * MAP Score: 25.421 Motif 5 ATCTCATTACTTTGCAAAAGTTTTTTTAAAATA 3 23 1 TCTTATGGCTTTTGCAAAAATTTTTTAAGAATT 20 18 1 TTGAACTAGGTTTATAAATATTTATGCTCACTT 27 67 0 TCAAATAACTTTTTAAAATCTTTTAAGCAATTC 15 253 1 CTTTTCTTAAAATTTTTAAATTAAAT 0 3 1 AAGGCTCAAATTCCGAAAAGTTTATATATCTCT 23 20 0 AACTATTTTATTCAAAAAATTTTATAATGTTCC 8 47 1 AATTAAAGACCTTCAAAAATTTTATTTGGGGGA 23 229 1 TGATGTTCATCTTAAAAAACTTTTGGGGGGCAA 11 215 1 AGGATAATAATTTTAAACACTTTCAGGGTTGTA 17 38 1 AAGAGGCGAGTTCTCAAATTTTTCTTCATCAAA 15 225 1 AGCTTTAGACTTTTCAACGCTTTACTTATTCAT 27 13 0 TACGTCAAGCTTTTTAACTATTTTGGAGCTTG 14 32 1 ATACTTTGCTTCTAAATCTTTCCATAAATTT 28 8 1 TACATAGGGATTTTAAACTATTTTATTCAAAAA 8 32 1 CTTCGAAAGCCTTTTAAATCTTTTATAAAAACA 20 73 1 TTCAACGAAATTTGTAACAACTTAAATGAGAAA 15 67 1 ATGTATTTTTCTCCGAAAGATTTATATACTAAC 12 28 1 TCCAGAAAAATTCTTAAATGCTTTAAGAGGCGA 15 201 1 AAAAACAGAACTTAAAAAGGCTTATTAAATTAT 15 102 1 CTAAGTTTTTAACTTCTTCTTCTAACAT 26 5 1 CCTAAGATAATGTTAAAAATTTTAGTGCTACTC 2 28 1 TCTGATTTGGTGTAAAAATATTTCGGGGGATTA 5 28 1 CTTATATTACTTGCGAAAGATTTATTAGAATGG 11 137 0 *** **** *** MAP Score: 25.0222 Motif 6 CCTCCAAGCATTAAAATTCCTATAATTCTA 0 213 0 AGAATGGCCGCATGAATACGGAGTCCTCATATTCTG 7 114 1 GCTGTCACCTAGAAATCCCTATTACATAG 8 3 1 AGCGGCAGGTCCCGGGTTCAAAGCCCGGCCGGGGCT 11 101 1 TGGTGGGGCGGGGGACTTGTAATCCCCAGGTCGCGG 12 98 1 ATCCCCAGGTCGCGGGTTCAAATCCCGCCCGGGGCT 12 119 1 GCCCATCCTGCGGGCTTTGGGAGCCCGTGACCCGGG 12 179 1 GAGCCCGTGACCCGGGTTCAAATCCCGGCGGCCCCA 12 199 1 TGGTAGGGCGCGGGCCTTGAGAGCCCGTGGGCGTTT 13 12 1 CGTTTGCCCGCCGGGGTTCAAATCCCCGTCCCGGCG 13 43 1 ACTTTATCCCCATGTTTAATGATTCCAAACAATCTT 15 32 0 TGTTTGGTGCCTAGGATAGTAAATCCGTTGGATGAA 19 16 1 ATCTAAACTTCTGAACTTCTAATCCCAGGAAAAGCT 25 215 1 * * *** ** *** MAP Score: 18.8728 Motif 7 GTAACGAAGAAGCCCGGATGGGAGGAGTACAA 0 121 1 CCGGGTTCAAAGCCCGGCCGGGGCTCCATTCT 11 112 1 CCCCGCTGGAGCCCCGGGCGGGATTTGAACCC 12 132 0 GGGGATTTGAACCCCGGCGGGCAAACGCCCAC 13 38 0 ATCTCTCGGTGCCCCGGTAGCCTAGCCTGGTG 12 71 1 GGGCCTTGAGAGCCCGTGGGCGTTTGCCCGCC 13 23 1 CTTCGGCGGTGCCCCGGTGGCTCAGCCTGGTA 11 53 1 CCGGGTTCAAATCCCGGCGGCCCCACCAATTT 12 210 1 CCGGTAGCCTAGCCTGGTGGGGCGGGGGACTT 12 84 1 GGGCTTTGGGAGCCCGTGACCCGGGTTCAAAT 12 190 1 AAGTATTAAAACCCTGGGAGCTATAAAATCTG 24 61 1 GTTTTCTATGAGCACGTTAGCGTCCCCTATAG 25 50 1 CGGGGTTCAAATCCCCGTCCCGGCGCCAGAAT 13 54 1 CCGGGCTTTGAACCCGGGACCTGCCGCTTACC 11 97 0 GCTACCCTACGGCCCCGCTGGAGCCCCGGGCG 12 144 0 TCCTTGCTATATCCTCGGAGGGAAAC 25 4 0 CCGGTGGCTCAGCCTGGTAGAGCGGCCGCTTG 11 66 1 ******* *** MAP Score: 18.2349 Motif 8 GGAGGAGTACAAAAAGGCAGCTAAAATTAC 0 141 1 ACGCTTCAAAGAAGAGGTGGCAAGAACTTG 7 176 1 AGAATTAAAGAAAAGGGAAGAAA 10 3 0 ATATCAGAATCAAAAGGCGGAGTGTAGATG 11 187 1 CCGAGAGATGGAAAAGGAAGTTAGTATATA 12 50 0 TAAATTATGAGAAGAGGCAATTGACAGAAT 15 127 1 TTGAAGGGAAGAAAAGGAGG 16 0 0 GAATTTTAATAAAAAGGAAGAAAAT 17 5 0 GGTATACATAGAAAGGGCAAGGTACGGAAA 19 93 1 AATGAAGATAGAAAAGGTAGTAAAATTG 21 8 0 CATTCATAGAGAAAAGGAATTAAAGACCTT 23 212 1 AAATACTTCGGAAAAGGAGGAGGTTAAAAG 24 34 1 ********** MAP Score: 10.6637 Motif 9 TGTGGGGGTAGGAGATGCCAGAGTTCCAGGAGAGGGTCAGGAAC 0 47 1 GAGAGTGTTCCTGGTAACGAAGAAGCCCGGATGGGAGGAGTACA 0 108 1 GGCCATTCAAGACCGCCTGGAGGGATAATAACTG 7 0 1 AATACGGAGTCCTCATATTCTGGATCCTCCTGGGGTTAGTTCTG 7 128 1 TGTATTCGAAGAATCTTCGGCGGTGCCCCGGTGGCTCAGCCTGG 11 39 1 CCCGGTGGCTCAGCCTGGTAGAGCGGCCGCTTGGTAAGCGGCAG 11 65 1 TAAGCGGCAGGTCCCGGGTTCAAAGCCCGGCCGGGGCTCCATTC 11 99 1 ATCTCTCGGTGCCCCGGTAGCCTAGCCTGGTGGGGCGGGGGACT 12 71 1 TGGTGGGGCGGGGGACTTGTAATCCCCAGGTCGCGGGTTCAAAT 12 98 1 GCTACCCTACGGCCCCGCTGGAGCCCCGGGCGGGATTTGAACCC 12 132 0 CCCGGGTCACGGGCTCCCAAAGCCCGCAGGATGGGCCAAGCTAC 12 171 0 GGGAGCCCGTGACCCGGGTTCAAATCCCGGCGGCCCCACCAATT 12 197 1 CCTGGTAGGGCGCGGGCCTTGAGAGCCCGTGGGCGTTTGCCCG 13 9 1 GGCGTTTGCCCGCCGGGGTTCAAATCCCCGTCCCGGCGCCAGAA 13 41 1 AACAGTCTTTGGTCTAAGAAAATCTCTCGGAGGGCAACA 20 110 1 TATTAAAACCCTGGGAGCTATAAAATCTGGGGGGTGAATT 24 64 1 * * * ** ** *** MAP Score: 8.52568 Motif 10 TAAAACTTAGGGTGAGTTATGG 1 1 1 GCCCCTAAGCAAATCCTAAGATAATGTTAAA 2 14 1 ACGTAATCCCCCGAAATATTTTTA 5 40 0 TAGATCACCCTAATTCCACGATTTGAAGATA 6 21 0 ATAATACCTCTAATCCCAGGAACGTCAATGA 7 79 1 AATACAGAACTAACCCCAGGAGGATCCAGAA 7 145 0 TTCTCCAAGTAAATTCCTGGCTACAGTTTCT 7 210 0 ATACTACGACAAACTCTACGGGAGCAAGTGA 7 240 1 AATCCTTAATAAATCTCGGGAGGTTGCGAG 9 9 0 CCCTTTTCTTTAATTCTTGGGGTGATTTAA 10 16 1 CCATTCTAATAAATCTTTCGCAAGTAATATA 11 137 1 GTTAGTATATAAATCTTTCGGAGAAAAATAC 12 30 0 GGGGGACTTGTAATCCCCAGGTCGCGGGTTC 12 107 1 TCGCGGGTTCAAATCCCGCCCGGGGCTCCAG 12 128 1 ACCCGGGTTCAAATCCCGGCGGCCCCACCAA 12 208 1 CCTAAAAAATAAATTTTAGGAGG 18 2 0 TGGTCTAAGAAAATCTCTCGGAGGGCAACA 20 119 1 TAAGCCCCAGAAATTTCACGCTGTTAAGACA 23 96 0 ACTTATATTTAAATACTTCGGAAAAGGAGGA 24 24 1 TAAAAGTATTAAAACCCTGGGAGCTATAAAA 24 58 1 TGGGAGCTATAAAATCTGGGGGGTGAATT 24 75 1 GATCCTTGCTATATCCTCGGAGGGAAAC 25 7 0 TCTGAACTTCTAATCCCAGGAAAAGCTTTAT 25 224 1 ACTTTTTAAGTAAACCCGAGCAAGCTTATCA 25 261 1 AGTTCAACTTAAACCCATCGGTTCACGATCA 27 93 1 CTTTGCTTCTAAATCTTTCCATAAATTTTTA 28 13 1 ******* *** MAP Score: 5.68057 Motif 11 TGGTAACGAAGAAGCCCGGATGGGAGGAGTACAA 0 119 1 GGCCATTCAAGACCGCCTGGAGGGATAATAACTG 7 10 1 CCTCATATTCTGGATCCTCCTGGGGTTAGTTCTG 7 138 1 AATCTTCGGCGGTGCCCCGGTGGCTCAGCCTGGT 11 50 1 TATTAGAATGGAGCCCCGGCCGGGCTTTGAACCC 11 114 0 GCCCCGGTAGCCTAGCCTGGTGGGGCGGGGGACT 12 81 1 GTCGCGGGTTCAAATCCCGCCCGGGGCTCCAGCG 12 127 1 ATCCCGCCCGGGGCTCCAGCGGGGCCGTAGGGTA 12 140 1 GGTAGCTTGGCCCATCCTGCGGGCTTTGGGAGCC 12 170 1 GACCCGGGTTCAAATCCCGGCGGCCCCACCAATT 12 207 1 CCTGGTAGGGCGCGGGCCTTGAGAGCC 13 3 1 CGCGGGCCTTGAGAGCCCGTGGGCGTTTGCCCGC 13 20 1 ACGGGGATTTGAACCCCGGCGGGCAAACGCCCAC 13 38 0 CGGGGTTCAAATCCCCGTCCCGGCGCCAGAATTT 13 54 1 GGAATTAACAGTTCCCCGCATGGCAGAAGAATCA 25 142 0 * **** ** *** MAP Score: 5.51969 Motif 12 CATCAAGTTGTGGGGGTAGGAGATGCCAGAG 0 39 1 TTCGGAAATTCGAGCCTGGAG 1 88 1 TTGACGTTCCTGGGATTAGAGGTATTATCAC 7 76 0 GAGCCCCGGCCGGGCTTTGAACCCGGGACCT 11 107 0 TAAAAAACTTTTGGGGGGCAATTCTCC 11 227 1 CCTAGCCTGGTGGGGCGGGGGACTTGTAATC 12 91 1 GAGCCCCGGGCGGGATTTGAACCCGCGACCT 12 125 0 GTGGGGCCGCCGGGATTTGAACCCGGGTCAC 12 205 0 TTTAGCTATGTGGGGCTAGAAA 12 274 1 TGGTAGGGCGCGGGCCTTGAGAGCCCGTGGG 13 12 1 GTTTGCCCGCCGGGGTTCAAATCCCCGTCCC 13 44 1 ATTCTGGCGCCGGGACGGGGATTTGAACCCC 13 55 0 TTCACTCAATCTGGAGGGGGATAAA 13 86 1 ATTTGAGGAATGGGAGAAGATTGTTTGGAAT 15 16 1 ACAAACACTTCTGGAGGCGAGGAGGT 16 60 1 TATCAATCTTCGAGGGTGGAAACCTTCGAAA 20 50 1 AAAATTTTATTTGGGGGAGAGAATTTGAGTG 23 244 1 CTATAAAATCTGGGGGGTGAATT 24 81 1 AAGCTTTTCCTGGGATTAGAAGTTCAGAAGT 25 221 0 ******* *** MAP Score: 5.13593 Motif 13 ATTTGGTGTAAAAATATTTCGGGGGATTACGT 5 32 1 GGCCATTCAAGACCGCCTGGAGGGATAATAACT 7 8 1 GTTCATCTTAAAAAACTTTTGGGGGGCAATTCTCC 11 219 1 GCCAGAATTTCACTCAATCTGGAGGGGGATAAA 13 78 1 ACGGATCAACAAACACTTCTGGAGGCGAGGAGGT 16 52 1 GATGAGAAAGAGTTTGATCTGGAGGAAATAGCAAA 19 148 1 TTGGTCTAAGAAAATCTCTCGGAGGGCAACA 20 118 1 GACCTTCAAAAATTTTATTTGGGGGAGAGAATTTG 23 236 1 ** ******** MAP Score: 2.52485 Motif 14 GAAGCCCGGATGGGAGGAGTACAAAAAGGCA 0 129 1 GTTATGGACATTGGAGAACTAAGGTATTCAC 1 25 1 TAAAAATATTTCGGGGGATTACGT 5 40 1 CAAGACCGCCTGGAGGGATAATAACTGGGAT 7 17 1 TGGCAAGAACTTGGAGAAGAAACTGTAGCCA 7 193 1 TAAAAAACTTTTGGGGGGCAATTCTCC 11 227 1 TATAAATCTTTCGGAGAAAAATACATAGGAA 12 23 0 TCACTCAATCTGGAGGGGGATAAA 13 87 1 AGAAAATCTCTCGGAGGGCAACA 20 126 1 AAAATTTTATTTGGGGGAGAGAATTTGAGTG 23 244 1 TGCTATATCCTCGGAGGGAAAC 25 1 0 GCGTCCCCTATAGAAGGAGTAGGATTAGCTT 25 69 1 GTTCCCCGCATGGCAGAAGAATCAGTTGCTA 25 135 0 CCTTTAATGTTAGAAGAAGAAGTTAAAAACT 26 13 0 * ********* MAP Score: 2.35772