AlignACE 3.0 10/20/99
AlignACE2 -i TH/TH_sum_all003_300.orf 
Parameter values:
 expect =      	10
 gcback =      	0.38
 minpass =     	200
 seed =        	944247713
 numcols =     	10
 undersample = 	1
 oversample = 	1

Input sequences:
#0	MTH106	137	tungsten formylmethanofuran dehydrogenase, subunit C homolog 
#1	MTH185	125	conserved protein
#2	MTH186	26	unknown
#3	MTH187	142	conserved protein
#4	MTH189	99	unknown
#5	MTH238	106	tungsten formylmethanofuran dehydrogenase, subunit C homolog 
#6	MTH384	249	unknown
#7	MTH387	24	conserved protein
#8	MTH388	35	unknown
#9	MTH393	41	NADH dehydrogenase (ubiquinone), subunit 1 related protein
#10	MTH394	55	unknown
#11	MTH397	40	formate hydrogenlyase, subunit 7 
#12	MTH399	23	polyferredoxin
#13	MTH400	33	polyferredoxin
#14	MTH403	187	formylmethanofuran:tetrahydromethanopterin formyltransferase II
#15	MTH405	130	polyferredoxin
#16	MTH915	131	unknown
#17	MTH916	77	conserved protein
#18	MTH917	77	molybdenum formylmethanofuran dehydrogenase, subunit E
#19	MTH927	139	ferredoxin
#20	MTH928	300	cobalamin biosynthesis protein N
#21	MTH1106	107	ferredoxin
#22	MTH1246	30	NADH dehydrogenase I, subunit N 
#23	MTH1251	147	conserved protein
#24	MTH1252	143	conserved protein
#25	MTH1253	135	unknown
#26	MTH1548	118	NADP-reducing hydrogenase, subunit A
#27	MTH1552	139	formate dehydrogenase, alpha subunit homolog
#28	MTH1553	71	tungsten formylmethanofuran dehydrogenase, subunit H
#29	MTH1560	107	nitrogenase NifH subunit
#30	MTH1563	37	nitrogenase NifD subunit
#31	MTH1567	235	catalytic subunit of nitrate reductase (flp)
#32	MTH1667	219	unknown
#33	MTH1668	84	conserved protein
#34	MTH1669	148	conserved protein
#35	MTH1672	41	conserved protein
#36	MTH1674	151	conserved protein
#37	MTH1708	300	carbon monoxide dehydrogenase, alpha subunit 
#38	MTH1710	21	carbon monoxide dehydrogenase, alpha subunit 
#39	MTH1740	86	pyruvate oxidoreductase, gamma subunit 

Motif 1
CCTTTTTTAAAAAGATTTATAT          	6	237	1
GGTACTATAAAAATTTTTTTATAGATT     	18	5	0
       TTTCAATTTTTTTATTTTTCAGGAA	19	3	1
GTCCATTAAGAAAGATTTATATATGGACCTGT	19	105	1
AAGAAATTAAAAATTTTTATAAATATAACGGC	20	83	0
TGAATGTATTAAATTTTCATATAATTATTACT	20	181	1
ATTTATATAGAAAACTTTATATTATCATAAAT	23	83	1
AATCAAATAGAAAAATATATATATAGGTGTGT	28	12	0
TTTTTGTAGAAAATTATTATATGGACGGCGGC	28	42	1
CCATTTACCAAAAAATTTAAATAG        	29	93	1
TTATTAAATTCAATTTTTATAAGAGTATCCCC	31	38	0
GTTTAATACGAAAATTGTTTATCATATGAGTT	34	12	0
AATCTTATTTAAAATTTTATAAAGGGGCCAGT	34	42	0
CAGGTATAGGAAAAATTTTTATAAAGGTAGTA	36	68	1
TCACTATATCAAACATTCATATAATATAAAGG	37	15	1
ATAATCACTTCAACCTTTATATTATATGAATG	37	28	0
CGACAATGCACAAAGTTTATATATAGATTCCA	37	218	1
TTTAGTTGACCAACATGTATATATATTAAAAA	39	28	1
TATATATATTAAAAATTTATAATGATTAACAA	39	45	1
          ***  *******
MAP Score: 18.6296

Motif 2
AAACATGTTAAAACAGGGGATGTTAG     	0	121	1
          ATAAAAGGGAATATGAAGACA	1	114	0
CTCCTATCTGAAATAGGGGAACCCGCTGTTG	3	11	1
TTACTGAAAGATGGAAGGAAATGACCTCAGG	4	74	0
TGGAATGAAAATGGAAGGGATTTAATCAGAA	10	21	1
TTTAATCAGAAAAGAGGGGATTTA       	10	41	1
GATTAAACACTTGAAGGGGAAGAGGCTGCCG	23	29	0
AATCGTAATAAAATAGGGGATCCGATGATTA	23	55	0
TGAAGATAACATGAAGGGGACTGTTAAATTT	27	82	1
TTTAGAATAGATGGAAGGGAACTTGAGGCTG	27	110	1
TCATGAGAAGAAAATGGGAAAAATAGAATTT	29	24	0
AAAATACCTGTAGATGGGGATACTCTTATAA	31	23	1
GATATTCCTTAAATAAGGAAATTTGATGGGA	31	71	1
TGTCCCCTGGAAACTGGGGATATCAAGGAAT	32	49	1
TTTACAGAGTTAGAAGGGGATTATATTTCCA	32	84	0
CTAACTCTGTAAAAAAGGAAACCACTTTAAC	32	102	1
ATATAAACAGAAAAACGGAATGTCTGTGTCC	32	175	1
AATCAGGAGTATATACGGGAAGTTTATTGTT	33	39	0
TATTACCACAATATAAGGGAAACCGAAGATT	37	64	0
TTTTTAATAAATGGTGGGGATGTGCCAGATA	37	164	0
          *** *******
MAP Score: 16.7171

Motif 3
TTGGAAGCTGGGGGTTTTTATGATGTCTTCATATTCC	1	91	1
TCTGAAATAGGGGAACCCGCTGTTGAACAGCTCATTG	3	17	1
TCTGTTAGGAGGGGGGCCGCAGCAGCCCTGGGTAACA	3	77	1
TCATGTCCTGGAGGTTCCTATGGAGTCACATCCACTT	6	22	1
CTTCTGTAGAGGGACCCTTCAGATATCAGTAAAAAAA	6	122	1
AAGAACATCCGGGGAGAGGACGTCGGATCCCTCGGCT	14	117	1
AGCACATCCAGGGATTCAGCCGAGGGATCCGACGTCC	14	134	0
TTATAACTGCGGGGGTCCTCAGCTGCCATGTAAAACA	19	52	1
 AGGACTCATGGGGTTATTACGGCAGCCTCTTCCCCT	23	9	1
TAATAAAATAGGGGATCCGATGATTAAACACTTGAAG	23	44	0
CTGGGATTCCAGGGTTTTGATGCTGTATTCTGACTTG	24	86	1
ATAGATGGAAGGGAACTTGAGGCTGAACCTGGA    	27	116	1
CCAGTTTCCAGGGGACATTCTGATGGCTATTACGAAG	32	29	0
CCTGGAAACTGGGGATATCAAGGAATCTCCTGGAAAT	32	54	1
GTTTATTGTTGTGGTTTTTATGGAGCCGAATCTGCTG	33	12	0
GACCATTGCCGGGGGTCTCAGGGTGTATAATGGTAAT	37	116	1
          **** *  ** *  * *
MAP Score: 13.425

Motif 4
AGTTTGGAAGCTGGGGGTTTTTATGATGTCT	1	88	1
CCATCATGTCCTGGAGGTTCCTATGGAGTCA	6	19	1
ATGACCATTGCCGGGGGTCTCAGGGTGTATA	37	114	1
TTACTAATATCTGGAGGTTTCTCTACAGAAA	6	161	0
TGCTTGCGTCCAGGAGGTCCTCTGCCTCCTC	14	75	0
CCCCTGGAAACTGGGGATATCAAGGAATCTC	32	52	1
ATCCGGGAATCTGGGTGTGCTGAGGCCTGAT	15	32	1
AGCTGTTCAACAGCGGGTTCCCCTATTTCAG	3	18	0
CATGTTAAAACAGGGGATGTTAG        	0	124	1
ATTATATTTCCAGGAGATTCCTTGATATCCC	32	65	0
GGCTGAATCCCTGGATGTGCTTACATTCAGC	14	150	1
ACTCTTTAACCTGGAGGCTTTGA        	26	105	1
CGTCCTCTCCCCGGATGTTCTTTCTGACCTC	14	108	0
TAACTGCATACCGGGTATGCTGATCATCAAA	34	104	0
CCCCAGTTTCCAGGGGACATTCTGATGGCTA	32	37	0
TCCATTATAACTGCGGGGGTCCTCAGCTGCC	19	48	1
TTATAAACCTCCGCAGGCATCAATTAACCTC	24	122	0
ATTTTTCAAGCTGGAGGATTTCAA       	34	134	1
          ******** **
MAP Score: 12.6822

Motif 5
CAGGGCTGCTGCGGCCCCCCTCCTAACAGATTT	3	74	0
TCCCAGAGCAGTTGAACCCCTCATAAAGGCT  	3	121	1
GTCCGGCCATGGTAAACCCTTCACCCCATCACA	4	20	0
ATCTTCTGTAGAGGGACCCTTCAGATATCAGTA	6	120	1
TTGCGTCCAGGAGGTCCTCTGCCTCCTCAATAA	14	70	0
CGAGGGATCCGACGTCCTCTCCCCGGATGTTCT	14	118	0
CCACAGAACTGCAGTACTCTGCCGAGGAGAAAG	16	70	1
CATGGCAGCTGAGGACCCCCGCAGTTATAATGG	19	49	0
  TGGCACTAAATGGCCTCTTCAGTTGATTGAT	20	8	1
GGGTTATTACGGCAGCCTCTTCCCCTTCAAGTG	23	20	1
        TTATAAACCTCCGCAGGCATCAATT	24	128	0
TCTAAATTTAACAGTCCCCTTCATGTTATCTTC	27	83	0
TTCTGTTTATATAACCCCCTCCCGCTGGTACTG	32	154	0
TATACACCCTGAGACCCCCGGCAATGGTCATCC	37	112	0
TATAATGGTAATAATCCTCCGCCTATCTGGCAC	37	141	1
          *  * ********
MAP Score: 12.5174

Motif 6
TAAAATATTCTCCTTAAAATATATAATTATCTACCTGGT	0	30	1
GGAAAATTGTTCATTAAAAAACATGTTAAAACAGGGGAT	0	103	1
ACTATGAAAATCCTTAAAATTTATTACTAAATCTTCTGT	6	90	1
CCTTCAGATATCAGTAAAAAAAAGTTTCTGTAGAGAAAC	6	137	1
CCTCCAGATATTAGTAAAAAAGGCCATAATTTTATTAAG	6	175	1
 ATATAAATCTTTTTAAAAAAGGTGAGTTAGACCTAAAA	6	221	0
        AATCTATAAAAAAATTTTTATAGTACCTTCC	18	2	1
CTCACGTATTTCCTGAAAAATAAAAAAATTGAAA     	19	5	0
TGCCGTTATATTTATAAAAATTTTTAATTTCTTGAGTTA	20	82	1
AATAAAAAAATTAATAAAAAGTCTTAAATAATCTTCATA	20	239	1
TATAAAGTTTTCTATATAAATCGTAATAAAATAGGGGAT	23	65	0
TATCTGTGCATCATGATAAAGTTTCACCATAAAAAGGAC	27	41	1
TTAGCCGCCGTCCATATAATAATTTTCTACAAAAATCAA	28	38	0
CCCTTCTAACTCTGTAAAAAAGGAAACCACTTTAACCAG	32	97	1
CAGATTCGGCTCCATAAAAACCACAACAATAAACTTCCC	33	15	1
AACTGGCCCCTTTATAAAATTTTAAATAAGATTAGGCAC	34	41	1
ATAGGAAAAATTTTTATAAAGGTAGTAAACATATGAATC	36	73	1
TCCCCACCATTTATTAAAAAGGTCCATGTCTTTATGTGT	37	175	1
ATTAAAAACATCATTATAAATCATTAATAATTGTCAATC	37	254	1
TCATTGTTAATCATTATAAATTTTTAATATATATACATG	39	41	0
          **  ******     *  *
MAP Score: 11.5822

Motif 7
CCCCATCATGTCCTGGAGGTTCCTATGGAG	6	17	1
         GCCCTGGAGACTTAAAGGGCT	32	1	1
GCATTCAACCTCCCTGAGGTCATTTCCTTC	4	62	1
CATGCTTGCGTCCAGGAGGTCCTCTGCCTC	14	78	0
TCGGCTGAATCCCTGGATGTGCTTACATTC	14	148	1
CAGCCTCTTCCCCTTCAAGTGTTTAATCAT	23	32	1
  TTAAATTCCTCTTGAAGTGTTCTCATGA	1	8	1
TGTAGAGGGACCCTTCAGATATCAGTAAAA	6	126	1
TCAGAATGTCCCCTGGAAACTGGGGATATC	32	43	1
GACGTCCTCTCCCCGGATGTTCTTTCTGAC	14	111	0
GTTGTGTTAACTCTTGAAGC          	15	120	1
AGCATCAAAACCCTGGAATCCCAGAAATTT	24	80	0
AGCTGAGGACCCCCGCAGTTATAATGGATA	19	46	0
  TTATAAACCTCCGCAGGCATCAATTAAC	24	125	0
GGATTATATTTCCAGGAGATTCCTTGATAT	32	68	0
CCGTAATAACCCCATGAGTCCT        	23	2	0
TGACTCTTTAACCTGGAGGCTTTGA     	26	103	1
CAGTACTGTTTTCATGAGGTCCATTAAGAA	19	87	1
 CGTGACCCTCTCATGAGATCAATTAGATT	21	9	1
 TTTAAATCATCCTTCAAGTAAGTCCATTC	30	18	0
TTTAACAGTCCCCTTCATGTTATCTTCAGT	27	80	0
TTAGGCCTTATCCTTCAGATCCATATC   	35	7	0
ATACGGATTTTTCCGGAAGTGGGCCAGCAA	25	110	1
TTGAAGTGTTCTCATGAAGCTGAATGATCT	1	21	1
TTTTACTAATATCTGGAGGTTTCTCTACAG	6	164	0
ACTAAATGGCCTCTTCAGTTGATTGATCGA	20	14	1
AATTTTTAATTTCTTGAGTTACATACATCG	20	100	1
    TTCTCTCTCCTGAATTAGGCCTTATC	35	25	0
TCAGTCTTATCCCATCAAATTTCCTTATTT	31	81	0
TCCAGGAGATTCCTTGATATCCCCAGTTTC	32	58	0
TTAACTAAATACCTGGATGTAAATCA    	31	219	1
          **********
MAP Score: 11.4831

Motif 8
TACAGTACCAGCGGGAGGGGGTTATATAAACA	32	152	1
ATTTAATCAGAAAAGAGGGGATTTA       	10	40	1
GTGGAATGAAAATGGAAGGGATTTAATCAGAA	10	20	1
AACCTCCAGGACATGATGGGGTGGGAAT    	6	6	0
TATCCATTATAACTGCGGGGGTCCTCAGCTGC	19	46	1
 TCCGGTTCAGTGTGATGGGGTGAAGGGTTTA	4	9	1
ATCGCACCCTGAGCGGAGGGATGACCATTGCC	37	94	1
GAATAATCGAGCCAGGAGGGATAATTCTGAGT	17	13	1
CTTTTTAATAAATGGTGGGGATGTGCCAGATA	37	164	0
AAAACATGTTAAAACAGGGGATGTTAG     	0	120	1
ATGATTAAACACTTGAAGGGGAAGAGGCTGCC	23	30	0
ACTGAAGATAACATGAAGGGGACTGTTAAATT	27	80	1
ATTTAGAATAGATGGAAGGGAACTTGAGGCTG	27	109	1
        AGGACTCATGGGGTTATTACGGCA	23	2	1
ATTGGTACTAAAGAGAAGGGAGCTATAAA   	23	128	1
AAATAGTTTGGAAGCTGGGGGTTTTTATGATG	1	84	1
TTTTTACAGAGTTAGAAGGGGATTATATTTCC	32	85	0
AAATAAGGAAATTTGATGGGATAAGACTGAAA	31	81	1
ATGTCCCCTGGAAACTGGGGATATCAAGGAAT	32	48	1
AGATGTATTTATCAGTTGGGGTGGAAATCTGA	5	68	1
TGACAAATCTGTTAGGAGGGGGGCCGCAGCAG	3	70	1
AGGGATGACCATTGCCGGGGGTCTCAGGGTGT	37	110	1
GAATGTAAGCACATCCAGGGATTCAGCCGAGG	14	146	0
GTCAGAAAGAACATCCGGGGAGAGGACGTCGG	14	111	1
          **  ********
MAP Score: 11.1583

Motif 9
AAAAATAGTTTGGAAGCTGGGGGTTTTTATGA	1	82	1
ATGTTACCCAGGGCTGCTGCGGCCCCCCTCCT	3	83	0
GAGATGTATTTATCAGTTGGGGTGGAAATCTG	5	67	1
GATGATAAAATTCCAGCTGCAGCAAAACCC  	13	13	1
ATATCCATTATAACTGCGGGGGTCCTCAGCTG	19	45	1
CTGTTTTACATGGCAGCTGAGGACCCCCGCAG	19	58	0
ATGAGGAATCTAACAGGTGAGGAATT      	22	14	1
GATTAAACACTTGAAGGGGAAGAGGCTGCCGT	23	28	0
GGTTAATTGATGCCTGCGGAGGTTTATAA   	24	124	1
AAAATCCGTATACCTGCGGCAGGTGGGACATA	25	89	0
GAATGTCCCCTGGAAACTGGGGATATCAAGGA	32	46	1
TAGGTTACAGTACCAGCGGGAGGGGGTTATAT	32	147	1
GCAGTTATTTTTCAAGCTGGAGGATTTCAA  	34	128	1
ACCTTTTTAATAAATGGTGGGGATGTGCCAGA	37	166	0
          *  *********
MAP Score: 9.46541

Motif 10
GCCCTTGATGACAGTGACAAATCTGTTAGGAGGGGGGCCGCAGCA	3	56	1
GAAATATTTATGGGAGATGTATTTATCAGTTGGGGTGGAAATCTG	5	54	1
ATCCTTAAAATTTATTACTAAATCTTCTGTAGAGGGACCCTTCAG	6	99	1
ATGTGAATCCACAGAACTGCAGTACTCTGCCGAGGAGAAAGATCA	16	62	1
GAAATACGTGAGGATATCCATTATAACTGCGGGGGTCCTCAGCTG	19	32	1
AGAAAAATTCTGAATCGATCAATCAACTGAAGAGGCCATTTAGTG	20	13	0
         TAAAATGAGGAATCTAACAGGTGAGGAATT      	22	1	1
AAATAGGGGATCCGATGATTAAACACTTGAAGGGGAAGAGGCTGC	23	31	0
TATTCTGACTTGAGGTTAATTGATGCCTGCGGAGGTTTATAA   	24	111	1
CACTTCCGGAAAAATCCGTATACCTGCGGCAGGTGGGACATACAC	25	86	0
   TTTGAAATACGTTAAAATACCTGTAGATGGGGATACTCTTAT	31	7	1
ATCCACATATTAGGTTACAGTACCAGCGGGAGGGGGTTATATAAA	32	137	1
TCGCACCCTGAGCGGAGGGATGACCATTGCCGGGGGTCTCAGGGT	37	95	1
CATAAAGACATGGACCTTTTTAATAAATGGTGGGGATGTGCCAGA	37	166	0
          *  *      *  *  * *  ****
MAP Score: 7.02118

Motif 11
AAGGCTGTAATGATAAAAATAGTTTGGAAG	1	68	1
TATGAAGACATCATAAAAACCCCCAGCTTC	1	94	0
AATACATCTCCCATAAATATTTCTGTGTGG	5	47	0
ACGAAAACGACTATGAAAATCCTTAAAATT	6	81	1
GAAGATTTAGTAATAAATTTTAAGGATTTT	6	96	0
     GGAGATGATAAAATTCCAGCTGCAG	13	5	1
     TTAAATCATAAATATCGAGTTACAT	16	5	1
       AATCTATAAAAAAATTTTTATAG	18	3	1
ATGGAAGGTACTATAAAAATTTTTTTATAG	18	13	0
TTAATGGACCTCATGAAAACAGTACTGTTT	19	84	0
TTTAAACGTTTCAGAAAAATTCTGAATCGA	20	40	0
TTAAAAATTTTTATAAATATAACGGCAAGG	20	79	0
CTTTATATTATCATAAATAATCATGTTAAT	23	97	1
TATAGTGCTGTAATAAAAACATGAGCGTAT	25	31	0
TAAAGTTTCACCATAAAAAGGACACTGAAG	27	57	1
CATTTTCTTCTCATGAAAACTGTTCAGTTT	29	39	1
GGGGATACTCTTATAAAAATTGAATTTAAT	31	38	1
GTGGTGCAACTCATAAAATTAGATGAATCT	31	125	1
AGATTCGGCTCCATAAAAACCACAACAATA	33	16	1
ACTGGCCCCTTTATAAAATTTTAAATAAGA	34	42	1
CCTATACCTGCCATAAATATATCCAAATAT	36	48	0
TTTACTACCTTTATAAAAATTTTTCCTATA	36	72	0
TATATAGATTCCATAAAATTAAAAACATCA	37	237	1
          **********
MAP Score: 5.32708

Motif 12
CAGTGACAAATCTGTTAGGAGGGGGGCCGCAGCAGCCCTGGG	3	67	1
TTCTGTGTGGTATTCCAGGAAGAGGCGCTGGGATAATTTTCC	5	15	0
GAGATGTATTTATCAGTTGGGGTGGAAATCTGATAATGGAGG	5	67	1
TTTATTACTAAATCTTCTGTAGAGGGACCCTTCAGATATCAG	6	109	1
         TAAATGCGTGATGTTGATGTCCT          	12	1	1
       ACTTCAGAGTGGTGGATGAGTTCAGGAGAGTGTTC	14	3	1
ATAACGGTTATTGAGGAGGCAGAGGACCTCCTGGACGCAAGC	14	63	1
GTCAGAAAGAACATCCGGGGAGAGGACGTCGGATCCCTCGGC	14	111	1
CTGGGTGTGCTGAGGCCTGATGTTGATCCCGTGAACCGGAAA	15	42	1
AGGATATCCATTATAACTGCGGGGGTCCTCAGCTGCCATGTA	19	42	1
GATTAAACACTTGAAGGGGAAGAGGCTGCCGTAATAACCCCA	23	18	0
CTGGGATTCCAGGGTTTTGATGCTGTATTCTGACTTGAGGTT	24	86	1
CTGAAAAGAAATGATAATGTGGTGCAACTCATAAAATTAGAT	31	107	1
AGCGGAGGGATGACCATTGCCGGGGGTCTCAGGGTGTATAAT	37	105	1
ATATAAACTTTGTGCATTGTCGCTGAACACATAAAGACATGG	37	198	0
          *      **  * **  *** *
MAP Score: 4.32698

Motif 13
AATTATATATTTTAAGGAGAATATTTTATC	0	28	0
AGGTTTCCCATTTCTGGAAAGACCAGGTAG	0	60	0
CTTGAAGTGTTCTCATGAAGCTGAATGATC	1	20	1
CTGGGATAATTTTCCGGTGG          	5	0	0
CTGTGTGGTATTCCAGGAAGAGGCGCTGGG	5	25	0
ACCCCATCATGTCCTGGAGGTTCCTATGGA	6	16	1
TGGTGGATGAGTTCAGGAGAGTGTTCAGAG	14	19	1
CCATGCTTGCGTCCAGGAGGTCCTCTGCCT	14	79	0
CTCGGCTGAATCCCTGGATGTGCTTACATT	14	147	1
TTTTTTTATTTTTCAGGAAATACGTGAGGA	19	16	1
ACAGTACTGTTTTCATGAGGTCCATTAAGA	19	86	1
  CGTGACCCTCTCATGAGATCAATTAGAT	21	8	1
CTGCTGTGTATTTAAGGAAGTTCCTACTAT	21	49	0
TATACGGATTTTTCCGGAAGTGGGCCAGCA	25	109	1
ACTGAACAGTTTTCATGAGAAGAAAATGGG	29	37	0
TTCCAGGAGATTCCTTGATATCCCCAGTTT	32	59	0
GGGATTATATTTCCAGGAGATTCCTTGATA	32	69	0
          **********
MAP Score: 2.70578

Motif 14
TTTGGAAGCTGGGGGTTTTTATGATGTCTTCA	1	90	1
  CTCATATGGGATGTCCTGATATCTGA    	2	8	1
TCTGTTAGGAGGGGGGCCGCAGCAGCCCTGGG	3	77	1
ATCTGATAATGGAGGTGCATAT          	5	94	1
ATCATGTCCTGGAGGTTCCTATGGAGTCACAT	6	21	1
GAGTTCAGGAGAGTGTTCAGAGGTGACTACCC	14	27	1
AACGGTTATTGAGGAGGCAGAGGACCTCCTGG	14	65	1
CCGGGAATCTGGGTGTGCTGAGGCCTGATGTT	15	34	1
CCATATACAACGAGATGCAGATATATGCATAT	18	39	1
GATCACCACACGATATGCATATATCTGCATCT	18	51	0
TTATAACTGCGGGGGTCCTCAGCTGCCATGTA	19	52	1
TAATAAAATAGGGGATCCGATGATTAAACACT	23	49	0
ATTTTTATAAGAGTATCCCCATCTACAGGTAT	31	26	0
CCACTTTAACCAGTATCCACATATTAGGTTAC	32	123	1
ACTGCATACCGGGTATGCTGATCATCAAATTT	34	101	0
TCAGAAATAACGGGATCCATATTAATTAGGAT	36	109	0
TGACCATTGCCGGGGGTCTCAGGGTGTATAAT	37	115	1
          ********  **
MAP Score: 0.566465