AlignACE 3.0 10/20/99 AlignACE2 -i TM/TM_operons002_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944251572 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TM0278 300 sugar ABC transporter, permease protein #1 TM0309 300 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #2 TM0310 43 beta-D-galactosidase #3 TM0384 125 anaerobic ribonucleoside-triphosphate reductase-related protein #4 TM0386 81 bacterioferritin comigratory protein/NADH dehydrogenase #5 TM0411 161 transcriptional regulator, XylR-related #6 TM0413 46 creatinine amidohydrolase, putative #7 TM0417 93 conserved hypothetical protein #8 TM0418 59 sugar ABC transporter, periplasmic sugar-binding protein, putative #9 TM0419 38 sugar ABC transporter, permease protein #10 TM0429 28 methyl-accepting chemotaxis protein #11 TM0431 80 sugar ABC transporter, permease protein #12 TM0432_TM0433 246 TM0432: sugar ABC transporter, periplasmic sugar-binding protein, putative, TM0433: pectate lyase #13 TM0434 89 alpha-glucosidase, putative #14 TM0595_TM0596 94 TM0595: sugar ABC transporter, periplasmic sugar-binding protein, putative, TM0596: sugar ABC transporter, permease protein #15 TM0598 300 sugar ABC transporter, permease protein #16 TM0752 89 alpha-glucosidase, putative #17 TM0755 111 conserved hypothetical protein #18 TM0807 161 alkyl hydroperoxide reductase, putative #19 TM0808 165 transcriptional regulator, XylR-related #20 TM0811 49 sugar ABC transporter, permease protein #21 TM1068 24 alpha-glucosidase, putative #22 TM1069 107 transcriptional regulator, DeoR family #23 TM1120 232 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein #24 TM1196 21 oligopeptide ABC transporter, ATP-binding protein #25 TM1198 69 oligopeptide ABC transporter, permease protein #26 TM1199 154 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #27 TM1203 60 maltose ABC transporter, permease protein #28 TM1204 300 maltose ABC transporter, periplasmic maltose-binding protein #29 TM1234 42 sugar ABC transporter, permease protein #30 TM1235 22 conserved hypothetical protein #31 TM1254 108 beta-phosphoglucomutase, putative #32 TM1280 37 conserved hypothetical protein #33 TM1375 166 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein #34 TM1834 134 alpha-glucosidase #35 TM1836 300 maltose ABC transporter, permease protein #36 TM1839 250 maltose ABC transporter, periplasmic maltose-binding protein #37 TM1854 38 sugar ABC transporter, permease protein #38 TM1855 29 sugar ABC transporter, periplasmic sugar-binding protein, putative #39 TM1856 206 transcriptional regulator, LacI family Motif 1 CTCCTTTCGAAAGGGAGGGGGACACACCCC 20 22 0 TTTTCAAGTTAAGGGAGGGGGAACCCCTCC 25 25 0 ATGGAACTTTCGGGGAGGGGTTCCCCCTCC 25 12 1 AAAAGATGGGGAGGGGTGTGTCCCCC 20 6 1 TTTTAAATAGATGGGAGGGGGGATT 23 5 0 ATACGAAATACAGGGAGGTGTTTTT 34 119 1 TTAATTCAACAGGGAGGTGCACAC 21 9 1 TTTGTAATCTAAAGGAGGTGTCC 36 237 1 TTTCGAAAGGAAAGGAGGTGTTGAT 22 92 1 CCCGGAATTTAGAGGAGGTGCACAC 13 74 1 AAACATCGAGAAGGGAGGGATTCCT 14 79 1 TATCTACCCGCAAGGAGGTGAAGGTGGT 28 282 1 TAAAAATTTACGAGGAGGTGTTTTGT 18 145 1 TCCATACGTTCAGGGAGGGAAAACA 27 45 1 GAAAACAAAACAGGGAGGAGAGTGG 11 65 1 AACCTTTCATAAAGGAGGGATACGT 38 14 1 CTTTTAAAAGAAAGGAGGAGTAAGGA 31 92 1 TAACTATGGAAGAGGAGGAGAAAGC 10 13 1 ATATTGGAAGAAGGGAGGTATTG 33 153 1 TCTTGGAAAATAAGGAGGTGAAGAGGGGGC 0 262 1 GTAAGCGCTTACAGGAGGTGCAAACT 39 190 1 CCCCCGGAAAAGGGGTGGGGATCCCCACCC 29 16 0 CAAATAAATATGGGGAGGGAGGATACCCTC 11 31 0 AAATCTTATGTTAGGAGGGGAGAGTT 12 230 1 TCCCTAATTTAATGGAGGTGTCTCTGT 17 94 1 TACCCGGGGTGGGGATCCCCACCC 29 4 1 CACAAAAGCGAAGTGAGGGGGAACCCCC 9 8 0 TGAAAAATGAAGGTGAGGGGAACCCCC 37 7 0 TGGAAGAATTTAAGGAGGGAAAAACGAAAA 19 55 0 CCAAGCGGTCAAAGGCGGGGGTCTGCAAAA 33 57 1 CAATAACGGAGGTGTTATTGC 24 4 1 ATAAATAAAAATGGGGGGTGAGATT 8 44 1 CCCTGAACGTATGGAAGGGGCTGGGGACCC 27 30 0 TGATTGCCTTCGGGGAGGGTATCCTCCCTC 11 17 1 TGAAAAGAACAAAGGAGGAAAAGATCGAAC 25 49 1 TCCGTTAACATTTGGAGGGGGGAGACCCCC 13 24 1 AATCCTATTCAAAGGGGGGATATGTT 23 216 1 TGACACCAGTAGAGGGGGGATTTTC 26 139 1 GCAGATTTCACCGGAAGGGGGTCCTTCCC 3 106 1 CCTTCATTTTTCAGGAGGGATAGA 37 24 1 ATACTAAGGCACGGGGGGAGAACTAGAGAA 23 147 1 GGTTCAAATACAAAGAGGGGGTCTCCCCCC 13 40 0 GCCGGGGTTTTTTGGAGGTGAACATGG 2 26 1 TTTCAACTTTTTTGGAGGTGAGTTTC 4 65 1 ********** MAP Score: 78.6285 Motif 2 GGATCAGCGGCCCTCACCTCGGGATCCTGGA 0 60 0 ATCCGAGAGTTCCCGCCCTCGAGGTAACGTA 0 87 1 TCTGGAGAACTCCCGCTCTCCATGGAAACGC 0 200 1 GCAGAGCGCCCCCTCTTCACCTCCTTATTTT 0 268 0 CCACAAAAAACCCCCGCGTTGTGCGGGGGCT 4 12 0 AGTTTCTACCTCCTTCTCTGGATTTTTCA 7 74 0 AATCTCACCCCCCATTTTTATTTATTTTA 8 40 0 GGGGGTTCCCCCTCACTTCGCTTTTGT 9 6 1 GCTTTCTCCTCCTCTTCCATAGTTAGAG 10 10 0 GGGGAGGGTATCCTCCCTCCCCATATTTATT 11 28 1 CCACTCTCCTCCCTGTTTTGTTTTCGTG 11 62 0 CCCTCCCTACTGAGATATCTG 12 0 1 AACTCTCCCCTCCTAACATAAGAT 12 232 0 AAAGAGGGGGTCTCCCCCCTCCAAATGTTAA 13 28 0 AGGGGGGAGACCCCCTCTTTGTATTTGAACC 13 39 1 AGGAATCCCTCCCTTCTCGATGTTTTCC 14 76 0 TCTTCTCTGATCTCCCTCGCACAGGAAAACG 15 97 1 GATCCTGCCCCCTTATGTTAAATTCGT 16 72 0 GGGGAGAATCTCTCCCCGTCT 18 0 0 GGGGAGAGATTCTCCCCGTTTTTTGTTCTCT 18 14 1 GACACACCCCTCCCCATCTTTT 20 1 0 GAGGGGTGTGTCCCCCTCCCTTTCGAAAGGA 20 20 1 GTGTGCACCTCCCTGTTGAATTAA 21 6 0 ATCAACACCTCCTTTCCTTTCGAAAAAT 22 89 0 AATCCCCCCTCCCATCTATTTAA 23 2 1 TCTAGTTCTCCCCCCGTGCCTTAGTATTTTA 23 143 0 AACATATCCCCCCTTTGAATAGGATTG 23 215 0 GGGGAGGGGTTCCCCCTCCCTTAACTTGAAA 25 23 1 GAAAATCCCCCCTCTACTGGTGTCATAG 26 136 0 CGGGGCTGGGTCCCCAGCCCCTTCCATACGT 27 23 1 GTCTAAATTTCCCTCTTCGTTCTCTTCGAAA 28 95 0 ACCACCTTCACCTCCTTGCGGGTAG 28 285 0 GGGGTGGGGATCCCCACCCCTTTTCCGGGGG 29 15 1 TTAGAAACCCCCCTGGTCGTGGTTTCAT 31 7 1 TCCTTACTCCTCCTTTCTTTTAAAAGAA 31 90 0 TTTTGCAGACCCCCGCCTTTGACCGCTTGGC 33 56 0 CAATACCTCCCTTCTTCCAATATAAA 33 150 0 AGTCCTGTCCTCTTCCTCCTTCGAACGCGAG 35 179 0 ATCATCATATTCTTCCTCGTTGGAGGAATCA 35 233 1 GGGGGTTCCCCTCACCTTCATTTTTCAGG 37 8 1 ACGTATCCCTCCTTTATGAAAGGTTGGT 38 11 0 AACCTTCAAGCCCCCATCAGGGGGCTTTTGT 39 26 1 ******** ** MAP Score: 22.606 Motif 3 TTTGTACAGTGGTGGTAGTATAATAACGAAG 1 235 1 CACAATATATTGTGGTAAAATCTCAGCAGAT 3 81 1 GGGGGTTTTTTGTGGTACAATTATTATTGAG 4 28 1 ATGAATATAATGTGATAAAATAAATAAAAAT 8 25 1 ATCGAAAAGATGTGGTAACATCACTGACGTG 12 45 0 ATGAAAATTCGGTGATAAAATCCCTTTGAAG 12 180 1 TTATAACCTATGCGGTATAATTCAAGGGGAA 14 49 1 CAACGATATTTGTGATAAAATTTTTCGAAAG 22 70 1 ATACTCTATCTGTGATATAATGATAGTAAAA 23 58 0 GCAATCTCTGTGTTGTAAAATACTAAGGCAC 23 128 1 AACGTTTACGTATGGTAATATCTACCCGCAA 28 264 1 ATCGGATCTTTGTGGTAGTATTAAATATGAA 31 33 0 CCCTTGCATATGTGGTATTATATTCTATGTG 33 13 1 TTATGAATTGGGTGTTAATATAAACAGACGG 36 54 0 ACGAAAATTCGGTGTTAAAATCCTTAGTGAA 36 176 1 ******* *** MAP Score: 19.883 Motif 4 AAAATCGGATTTTTTCGTGTTTGGTTCTCTT 1 206 1 TCGCCGGGGTTTTTTGGAGGTGAACATGG 2 24 1 CCACCAACAATTTTTTGAGATGTAACTAAAC 3 46 1 AACGCGGGGGTTTTTTGTGGTACAATTATTA 4 23 1 AGTTTCAACTTTTTTGGAGGTGAGTTTC 4 63 1 CTCACTTCGCTTTTGTGAGGTGATTCC 9 21 1 TATGTGTAATTTTTTAGTGATTCAAATTTGA 18 44 1 AATTTGAAATTTTTTAGAGTTATTTTACTAT 23 36 1 AGATAGAGTATTTTTTGTGTTTCTCTACGAA 23 78 1 ATAGAAAGATTTATTTGTGGTTAATCTTTTC 26 43 1 GGCTTTTGTTTTTTGTGAGTTTTGATTAAAA 39 48 1 ***** ***** MAP Score: 13.3355 Motif 5 CCATGGAGAGCGGGAGTTCTCCAGAGAGGATC 0 193 0 TCCGGTTTCAGAGGAATTATTCGAACTCTGCG 1 44 0 TTCCAGAAAATCGGATTTTTTCGTGTTTGGTT 1 200 1 CCCGGCGATCGCCGGGGTTTTTTGGAGGTGAA 2 16 1 CCCGCACAACGCGGGGGTTTTTTGTGGTACAA 4 16 1 CTTCGCTTTTGTGAGGTGATTCC 9 25 1 ATTGCCTTCGGGGAGGGTATCCTCCCTCCCCA 11 19 1 CAAATACAAAGAGGGGGTCTCCCCCCTCCAAA 13 34 0 AACATCGAGAAGGGAGGGATTCCT 14 80 1 CGAAGCGATGGTGAGAAGATCCACGCGGTGTT 15 50 0 CCACTTCGTTGAGAAAGTTTTCATTCAGATCG 15 228 0 GAACAACTATGTGAATTTTTTCATATATTGTA 17 12 0 CCCTAATTTAATGGAGGTGTCTCTGT 17 95 1 AGACGGGGAGAGATTCTCCCCGTTTT 18 4 1 AAAAATTTACGAGGAGGTGTTTTGT 18 146 1 AAACAAGAAAGCGGGTGGCTCCTTCTGGAGCC 19 20 1 ACAATAATTTATGAAGTTGTTTGCGGCATGCA 19 135 1 AAAGATGGGGAGGGGTGTGTCCCCCTCCCTTT 20 11 1 CCTATTCAAAGGGGGGATATGTT 23 219 1 TGGAACTTTCGGGGAGGGGTTCCCCCTCCCTT 25 13 1 GACACCAGTAGAGGGGGGATTTTC 26 140 1 GCGACATCCCGAGGAGATTTTCAACGTTATTT 28 207 0 AACCACGACCAGGGGGGTTTCTAA 31 2 0 GCGGTCAAAGGCGGGGGTCTGCAAAATCCCTA 33 61 1 TCTGGAGGCGGCGGTGGGATTCGAACCCACGA 33 94 0 TATTGGAAGAAGGGAGGTATTG 33 154 1 TACGAAATACAGGGAGGTGTTTTT 34 120 1 TTTATTGATCGTGGAATGTTTCGAAAATGAGG 36 11 0 TTGTAATCTAAAGGAGGTGTCC 36 238 1 TGATGGGGGCTTGAAGGTTTTCCATATCAAAA 39 13 0 TCGGAAATAGTTGAAGGTATTCGCTTGAAATA 39 118 1 * ****** *** MAP Score: 11.4115 Motif 6 TTGGTTCTCTTTGTACAGTGGTGGTAGTATAAT 1 226 1 ATCGCCGGGGTTTTTTGGAGGTGAACATGG 2 23 1 TAGTTTCAACTTTTTTGGAGGTGAGTTTC 4 62 1 CCTCACTTCGCTTTTGTGAGGTGATTCC 9 20 1 TTACCCGGAATTTAGAGGAGGTGCACAC 13 71 1 AAACAGAGAGTTTCTCGCAGATGATCGCTGAAA 15 134 1 GAATCCCTAATTTAATGGAGGTGTCTCTGT 17 91 1 TTTTAAAAATTTACGAGGAGGTGTTTTGT 18 142 1 GAAATATTCGTTTTCTGGACGTAAAAGTCGATT 28 158 1 TCCCCACCCCTTTTCCGGGGGTGCACC 29 25 1 TCTCTGGTGCGTTTGAAGAGGTGAGTGA 35 282 1 CTCTTTGTAATCTAAAGGAGGTGTCC 36 234 1 TATGTAAGCGCTTACAGGAGGTGCAAACT 39 187 1 *** ******* MAP Score: 11.3983 Motif 7 AAAATCGGATTTTTTCGTGTTTGGTTCTCTTT 1 206 1 TTGATGAATGTTTTTATTTTTTCCTCTAAAGA 1 271 0 ATGGATCTGTTTGTTAATGTTTT 3 1 0 TTCCTCTTTTTTTCTAATTTTTCTTATAGTTG 5 81 1 TCACCCCCCATTTTTATTTATTTTATCACATT 8 33 0 TATGTGTAATTTTTTAGTGATTCAAATTTGAT 18 44 1 AGCCACCCGCTTTCTTGTTTTTATTTTCTG 19 8 0 CTGGAGCCACCTTTTCGTTTTTCCCTCCTTAA 19 44 1 AGATAGAGTATTTTTTGTGTTTCTCTACGAAG 23 78 1 GGATGGGTTGCTTTTTGTTTTTTTCAAAATCA 23 185 1 TTAATCTTTTCTTTTTCTTTTTTTCAACCTTT 26 63 1 TCCGGCCAGCCTTTTAATTTTTTAAGAAGCGT 34 38 1 CATCAGGGGGCTTTTGTTTTTTGTGAGTTTTG 39 40 1 ***** ***** MAP Score: 10.1554 Motif 8 TCCAGGATCCCGAGGTGAGGGCCGCTGATCCG 0 60 1 CGTTACCTCGAGGGCGGGAACTCTCGGATCAG 0 84 0 GTTTCCATGGAGAGCGGGAGTTCTCCAGAGAG 0 197 0 GGCAAAAGGGGGCAGAGCGCCCCCTCTTCA 0 280 0 CAGATTTCACCGGAAGGGGGTCCTTCCC 3 107 1 CAACTTTTTTGGAGGTGAGTTTC 4 68 1 AATAAAAATGGGGGGTGAGATT 8 47 1 AAAAGCGAAGTGAGGGGGAACCCCC 9 3 0 CTATGGAAGAGGAGGAGAAAGC 10 16 1 TGATTGCCTTCGGGGAGGGTATCCTCCCTCCC 11 17 1 AAAACAAAACAGGGAGGAGAGTGG 11 66 1 TCTTATGTTAGGAGGGGAGAGTT 12 233 1 GTTAACATTTGGAGGGGGGAGACCCCCTCTTT 13 27 1 AAACATCGAGAAGGGAGGGATTCCT 14 79 1 CGGAGAAACACCGCGTGGATCTTCTCACCATC 15 44 1 AGACGGGGAGAGATTCTCCCCGTTT 18 3 1 AAAAGATGGGGAGGGGTGTGTCCCCCTCC 20 7 1 TCCTTTCGAAAGGGAGGGGGACACACCCCTCC 20 19 0 TACTAAGGCACGGGGGGAGAACTAGAGAAGCA 23 148 1 ATGGAACTTTCGGGGAGGGGTTCCCCCTCCCT 25 12 1 AAAGAACAAAGGAGGAAAAGATCGAAC 25 52 1 TGACACCAGTAGAGGGGGGATTTTC 26 139 1 AAACTTTTACGGGGCTGGGTCCCCAGCCCCTT 27 14 1 CTACCCGCAAGGAGGTGAAGGTGGT 28 285 1 TACCCGGGGTGGGGATCCCCACCCCT 29 4 1 GAAACCACGACCAGGGGGGTTTCTAA 31 4 0 AAGCGGTCAAAGGCGGGGGTCTGCAAAATCCC 33 59 1 TCTCTGGAGGCGGCGGTGGGATTCGAACCCAC 33 96 0 ********* * MAP Score: 9.19593 Motif 9 AAGAATCTCTTCCCATTTCTTTGCGAGATCGT 0 234 0 AGCGCCCCCTCTTCACCTCCTTATTTTCCAAG 0 263 0 AGAGGGGGCGCTCTGCCCCCTTTTGCC 0 283 1 AAACTTTTGTTTCCTCTTTTTTTCTAATTTTT 5 71 1 TTTTCCATTCCTTTCGTTTGTTAT 5 147 0 AGTTTCTACCTCCTTCTCTGGATTTTTC 7 75 0 AATCTCACCCCCCATTTTTATTTATTTTA 8 40 0 GCTTTCTCCTCCTCTTCCATAGTTAGA 10 11 0 GGAGGGTATCCTCCCTCCCCATATTTATTTGC 11 30 1 TCAGTGATGTTACCACATCTTTTCGATTCAAG 12 49 1 AACTCTCCCCTCCTAACATAAGATTT 12 230 0 ACTCAGACCTCTCTTTCCTTGAGTTTCTTC 14 8 1 TCTCCGAGAGTTCTTTCTCTTTCAAAGAGACG 15 18 0 GATCCTGCCCCCTTATGTTAAATT 16 75 0 TGAAACCGCTTTCCTTACATTTTCTGCTATAA 17 51 1 GGGAGAGATTCTCCCCGTTTTTTGTTCTCTAT 18 15 1 AGAAGGAGCCACCCGCTTTCTTGTTTTTATTT 19 14 0 GGACACACCCCTCCCCATCTTTT 20 1 0 GAGGGGTGTGTCCCCCTCCCTTTCGAAAGGAG 20 20 1 TCTCTCTCTCCTTTCGAAAGGGA 20 36 0 ATCAACACCTCCTTTCCTTTCGAAAAATTT 22 87 0 AATCCCCCCTCCCATCTATTTAAAA 23 3 1 CTAGTTCTCCCCCCGTGCCTTAGTATTTTACA 23 141 0 GGGGAGGGGTTCCCCCTCCCTTAACTTGAAAA 25 23 1 GATCTTTTCCTCCTTTGTTCTTTTCAAGTTAA 25 43 0 GAAAATCCCCCCTCTACTGGTGTCATA 26 137 0 GGGGCTGGGTCCCCAGCCCCTTCCATACGTTC 27 24 1 ACCACCTTCACCTCCTTGCGGGTAGAT 28 283 0 GGGGTGGGGATCCCCACCCCTTTTCCGGGGGT 29 15 1 TCCTTACTCCTCCTTTCTTTTAAAAGAATAA 31 87 0 GATTTTGCAGACCCCCGCCTTTGACCGCTTGG 33 57 0 CAATACCTCCCTTCTTCCAATATAAAA 33 149 0 AAAAACACCTCCCTGTATTTCGTATCCACC 34 114 0 AAGTCCTGTCCTCTTCCTCCTTCGAACGCGAG 35 179 0 GGGGGTTCCCCTCACCTTCATTTTTCAGG 37 7 1 ACGTATCCCTCCTTTATGAAAGGTTGG 38 12 0 **** * ***** MAP Score: 8.97391 Motif 10 TGATCCGAGAGTTCCCGCCCTCGAGGTAACG 0 85 1 CCAAGAATCTCTTCCCATTTCTTTGCGAGAT 0 237 0 TTGAGAATTAGTTTCAACTTTTTTGGAGGTG 4 54 1 GGAAACTTTTGTTTCCTCTTTTTTTCTAATT 5 69 1 TTTTCCATTCCTTTCGTTTGT 5 150 0 AGTTTCTACCTCCTTCTCTGGA 7 81 0 GGGGGTTCCCCCTCACTTCGCTTT 9 3 1 GCTTTCTCCTCCTCTTCCATAGTT 10 14 0 GGGAGGGTATCCTCCCTCCCCATATTTATTT 11 29 1 CCACTCTCCTCCCTGTTTTGTTTT 11 66 0 AACTCTCCCCTCCTAACATAAGA 12 233 0 AAGAGGGGGTCTCCCCCCTCCAAATGTTAAC 13 27 0 AGGAATCCCTCCCTTCTCGATGTTTTCC 14 76 0 TCCGAGAGTTCTTTCTCTTTCAAAGAGACGT 15 17 0 GAAGCCGGTTGTTTCTTCTCTGATCTCCCTC 15 84 1 GAAACTCTCTGTTTCGATTCCGTTTTCCTGT 15 117 0 AGCTGAGAGAGTTTCGACTTCAACACTTTGT 15 197 0 ACCTTTTCGTTTTTCCCTCCTTAAATTCTTC 19 52 1 GGGAGGGGTGTGTCCCCCTCCCTTTCGAAAG 20 18 1 TCTCTCTCTCCTTTCGAAAGGGAG 20 35 0 TTCGGGGAGGGGTTCCCCCTCCCTTAACTTG 25 20 1 GTTCGATCTTTTCCTCCTTTGTTCTTTTCA 25 49 0 ACAAATAAATCTTTCTATTTCCAGATAATCA 26 30 0 GTGGTTAATCTTTTCTTTTTCTTTTTTTCAA 26 59 1 TGTTTTCCCTCCCTGAACGTATGG 27 46 0 TTGGTCTAAATTTCCCTCTTCGTTCTCTTCG 28 98 0 ACCACCTTCACCTCCTTGCGGGTAG 28 285 0 GTTTTCCACCCCGAAACGATTA 32 1 1 CAATACCTCCCTTCTTCCAATATAAAA 33 149 0 CACGTTTCCGCTTCTGATGACCAC 35 3 1 GGAAGTTTCGCTTTCAACTTCAACAACTTTG 35 53 1 GTCCTGTCCTCTTCCTCCTTCGAACGCGAGT 35 178 0 ****** **** MAP Score: 7.81591 Motif 11 TGAAAAAGCCTTCAGAAAAGAAACTCGACGTTAA 1 96 0 TAACTAACCAACCACATTATAATCAATTTGTCAA 5 110 0 TATTTATTTTATCACATTATATTCATTTTCATTA 8 17 0 CTTCAAGTTAATCAAACTTGACACGGATGAAAAT 12 154 1 AGTATCAGACATCAAAATCGAAAATCTTATGTTA 12 209 1 TTTCTTCACAATCAAATTATAACCTATGCGGTAT 14 33 1 TGCGAGGGAGATCAGAGAAGAAACAACCGGCTTC 15 84 0 TTCTGCTATAATCACTTTGGAATCCCTAATTTAA 17 72 1 TCTGTTCTGTATCAAATTTGAATCACTAAAAAAT 18 52 0 GAGAATGGATATCAAATTAGAATCATTTTAAAAA 18 117 1 ACATAAAGTTATCATAAATTAATCACAAAAGTCA 22 38 1 TTGTGGTAGTATTAAATATGAAACCACGACCAGG 31 21 0 CTCCCCATCATAGTATAATCGTTTCGGGGT 32 17 0 **** * * *** * MAP Score: 7.51815 Motif 12 TTTTCACGCAGAGTTCGAATAATTCCTCTG 1 38 1 TGCTTCCAGTGAGTTTGACGTCCATTTCAG 15 161 0 CATCACCTCTGGGTACGAATTCATACATAA 22 14 1 CCCTATTCGTGGGTTCGAATCCCACCGCCG 33 88 1 TTTTTAAGAAGCGTTTGAATTCATGGAAAA 34 56 1 TTACAAACTCGCGTTCGAAGGAGGAAGAGG 35 172 1 ACGCACCAGAGAGTTTGAAGTTCACAAAGC 35 264 0 ACTCTCTGGTGCGTTTGAAGAGGTGAGTGA 35 280 1 ATGTCAATCTGGATTCGAATCGGTGTTTTT 36 145 0 CCCCTGATGGGGGCTTGAAGGTTTTCCATA 39 19 0 ********** MAP Score: 5.9168 Motif 13 AGAAACTCGACGTTAATCTTCTATAATTCCCTG 1 79 0 CGATTTTTACCGTCAATTTTCTCATCTGAAATC 1 143 0 AAAAATTGTTGGTGGAGATTCTAAAAAGATGGA 3 28 0 AGAAACACCGCGTGGATCTTCTCACCATCGCTT 15 47 1 GGAATCGAAACAGAGAGTTTCTCGCAGATGATC 15 127 1 ATCTCAGAAACGTTGCATTTCTCAGAAAGGCCT 15 266 1 AGACGGGGAGAGATTCTCCCCGTTTTTT 18 5 1 TGATACAGAACAGAAAAATTCACGAAACACAAT 18 72 1 CTTGATTTTACGTGAACGTTCACGGTATCATTT 26 102 1 TTGGAAATAACGTTGAAAATCTCCTCGGGATGT 28 203 1 CTTGACATCACGGTAACTTTCACGGTAACGTTT 28 238 1 GATTTAGACAGGTTAAACTTCTCATGTTATTCT 31 61 1 *** ** ***** MAP Score: 5.14846 Motif 14 GATCTTGGAGAAGGTCTCAACGGTGATGTCTTCGA 0 162 0 GATGTTTCAAATTTTCACGTCAGTGATGTTACCAC 12 30 1 CACCGCGTGGATCTTCTCACCATCGCTTCGGTGAA 15 52 1 CGAAACAGAGAGTTTCTCGCAGATGATCGCTGAAA 15 132 1 CTGAATGAAAACTTTCTCAACGAAGTGGCCAGTTA 15 232 1 ATATATGAAAAAATTCACATAGTTGTTCCAGTTTT 17 16 1 AGACGGGGAGAGATTCTCCCCGTTTTTTGTTCTCT 18 10 1 ACCACCTTCACCTCCTTGCGGGTAGATA 28 282 0 GAGCAGATATATGTTCACAAAGTTGTTGAAGTTGA 35 66 0 GTGAACATATATCTGCTCACCGGTGGAGGTCCCGC 35 83 1 AGAGAGTTTGAAGTTCACAAAGCTGATTCCTCCAA 35 252 0 AATCCTGAATAATTTCTCTTAATCGGAAATAGTTG 39 96 1 * ***** ** ** MAP Score: 5.09278 Motif 15 GAGTCTTGGTTCCTCTGGAATCCTTGGCCTG 0 133 0 CTCCAAGATCCTCTCTGGAGAACTCCCGCTC 0 187 1 TGGGAAGAGATTCTTGGAAAATAAGGAGGTG 0 251 1 TTCGAATAATTCCTCTGAAACCGGATACCAG 1 51 1 GTCGAGTTTCTTTTCTGAAGGCTTTTTCAAA 1 101 1 ATCGCCGGGGTTTTTTGGAGGTGAACATGG 2 23 1 CTCAGCAGATTTCACCGGAAGGGGGTCCTTC 3 102 1 TAGTTTCAACTTTTTTGGAGGTGAGTTTC 4 62 1 GTGTCCTCCTTCAGGAGGAATCTGCCAT 6 28 0 GGAGGATACCCTCCCCGAAGGCAATCATCAT 11 13 0 CACGCGGTGTTTCTCCGAGAGTTCTTTCTCT 15 30 0 GGACGTCAAACTCACTGGAAGCAGCACCTAC 15 168 1 AACGTTGCATTTCTCAGAAAGGCCTACGAGG 15 274 1 TGATAGAATTTTCTCAGGTAATTAATTCGTC 16 35 1 GCGGGTGGCTCCTTCTGGAGCCACCTTTTCG 19 30 1 TCTCTCTCTCCTTTCGAAAGGGAGGGGGAC 20 29 0 GGGGGAACCCCTCCCCGAAAGTTCCATGA 25 8 0 TGTTTTCCCTCCCTGAACGTATGGAAGGG 27 41 0 CCTCTTCGTTCTCTTCGAAACTGTTTTTTAT 28 84 0 GAAATATTCGTTTTCTGGACGTAAAAGTCGA 28 158 1 TTCCAAATAATTTCCTGGAATCGACTTTTAC 28 178 0 GTTGAAAATCTCCTCGGGATGTCGCTTGACA 28 214 1 TCCCCACCCCTTTTCCGGGGGTGCACC 29 25 1 TTAGAAACCCCCCTGGTCGTGGTTTCATA 31 8 1 TGTAGCCTGGCTCTCTGGAGGCGGCGGTGGG 33 108 0 CAACTATATACTTTCCGAACGTTTTTTCCAT 34 78 0 CATATATCTGCTCACCGGTGGAGGTCCCGCA 35 88 1 GAACTTCAAACTCTCTGGTGCGTTTGAAGAG 35 271 1 TCACCTTCATTTTTCAGGAGGGATAGA 37 21 1 AAAACAAAAGCCCCCTGATGGGGGCTTGAAG 39 29 0 TATGTAAGCGCTTACAGGAGGTGCAAACT 39 187 1 ***** ***** MAP Score: 3.87476 Motif 16 ACTCCAGGATCCCGAGGTGAGGGCCGCTGATCCG 0 58 1 CGTTACCTCGAGGGCGGGAACTCTCGGATCAGCG 0 82 0 GGCAAAAGGGGGCAGAGCGCCCCCTCTTCA 0 280 0 AACCCCGGCGATCGCCGGGGCTTCC 2 1 0 GCAGATTTCACCGGAAGGGGGTCCTTCCC 3 106 1 TGTCCTCCTTCAGGAGGAATCTGCCATTTACCCA 6 21 0 ACAAAAGCGAAGTGAGGGGGAACCCCC 9 3 0 TGATTGCCTTCGGGGAGGGTATCCTCCCTCCCCA 11 17 1 GTTAACATTTGGAGGGGGGAGACCCCCTCTTTGT 13 27 1 AAACATCGAGAAGGGAGGGATTCCT 14 79 1 GTCAAACTCACTGGAAGCAGCACCTACAAAGTGT 15 172 1 AATTTAACATAAGGGGGCAGGATC 16 75 1 CCCTAATTTAATGGAGGTGTCTCTGT 17 95 1 AAAAACAAGAAAGCGGGTGGCTCCTTCTGGAGCC 19 18 1 AAAGATGGGGAGGGGTGTGTCCCCCTCCCTTTCG 20 11 1 TTTTAAATAGATGGGAGGGGGGATT 23 1 0 ATACTAAGGCACGGGGGGAGAACTAGAGAAGCAA 23 147 1 AGAAGCAACCCTGGATGGGTTGCTTTTTGTTTTT 23 173 1 CAATAACGGAGGTGTTATTGC 24 5 1 ATGGAACTTTCGGGGAGGGGTTCCCCCTCCCTTA 25 12 1 TAAAACTTTTACGGGGCTGGGTCCCCAGCCCCTT 27 12 1 ATCTACCCGCAAGGAGGTGAAGGTGGT 28 283 1 TACCCGGGGTGGGGATCCCCACCCCTTT 29 4 1 GAAACCACGACCAGGGGGGTTTCTAA 31 2 0 TTCTATGTGGATGGCGGCGTAGCCAAGCGGTCAA 33 35 1 CCAAGCGGTCAAAGGCGGGGGTCTGCAAAATCCC 33 57 1 GCCTGGCTCTCTGGAGGCGGCGGTGGGATTCGAA 33 101 0 TATAAAAAGCCAGGCCGTGTAGCCTGGCTCTCTG 33 122 0 TATCTGCTCACCGGTGGAGGTCCCGCAATGGCTG 35 92 1 GGAGACCAAAATGTCCGTGTGTCCAACAGGAGTT 35 133 0 TGAAAAATGAAGGTGAGGGGAACCCCC 37 3 0 * ***** ** ** MAP Score: 0.555854