AlignACE 3.0 10/20/99 AlignACE2 -i TM/TM_operons002_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944251602 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TM0278 300 sugar ABC transporter, permease protein #1 TM0309 300 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #2 TM0310 43 beta-D-galactosidase #3 TM0384 125 anaerobic ribonucleoside-triphosphate reductase-related protein #4 TM0386 81 bacterioferritin comigratory protein/NADH dehydrogenase #5 TM0402 300 ammonium transporter #6 TM0404 47 deoxycytidylate deaminase, putative #7 TM0411 161 transcriptional regulator, XylR-related #8 TM0413 46 creatinine amidohydrolase, putative #9 TM0417 93 conserved hypothetical protein #10 TM0418 59 sugar ABC transporter, periplasmic sugar-binding protein, putative #11 TM0419 38 sugar ABC transporter, permease protein #12 TM0429 28 methyl-accepting chemotaxis protein #13 TM0431 80 sugar ABC transporter, permease protein #14 TM0432_TM0433 246 TM0432: sugar ABC transporter, periplasmic sugar-binding protein, putative, TM0433: pectate lyase #15 TM0434 89 alpha-glucosidase, putative #16 TM0595_TM0596 94 TM0595: sugar ABC transporter, periplasmic sugar-binding protein, putative, TM0596: sugar ABC transporter, permease protein #17 TM0598 300 sugar ABC transporter, permease protein #18 TM0752 89 alpha-glucosidase, putative #19 TM0755 111 conserved hypothetical protein #20 TM0757 107 hypothetical protein #21 TM0758 159 flagellin #22 TM0803 141 CTP synthetase #23 TM0807 161 alkyl hydroperoxide reductase, putative #24 TM0808 165 transcriptional regulator, XylR-related #25 TM0811 49 sugar ABC transporter, permease protein #26 TM1068 24 alpha-glucosidase, putative #27 TM1069 107 transcriptional regulator, DeoR family #28 TM1120 232 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein #29 TM1196 21 oligopeptide ABC transporter, ATP-binding protein #30 TM1198 69 oligopeptide ABC transporter, permease protein #31 TM1199 154 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #32 TM1203 60 maltose ABC transporter, permease protein #33 TM1204 300 maltose ABC transporter, periplasmic maltose-binding protein #34 TM1234 42 sugar ABC transporter, permease protein #35 TM1235 22 conserved hypothetical protein #36 TM1254 108 beta-phosphoglucomutase, putative #37 TM1280 37 conserved hypothetical protein #38 TM1374 47 phosphoglycerate mutase #39 TM1375 166 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein #40 TM1834 134 alpha-glucosidase #41 TM1836 300 maltose ABC transporter, permease protein #42 TM1839 250 maltose ABC transporter, periplasmic maltose-binding protein #43 TM1854 38 sugar ABC transporter, permease protein #44 TM1855 29 sugar ABC transporter, periplasmic sugar-binding protein, putative #45 TM1856 206 transcriptional regulator, LacI family #46 TM1864 71 hypothetical protein Motif 1 CTCCTTTCGAAAGGGAGGGGGACACACCCC 25 22 0 TTTTCAAGTTAAGGGAGGGGGAACCCCTCC 30 25 0 ATGGAACTTTCGGGGAGGGGTTCCCCCTCC 30 12 1 AAAAGATGGGGAGGGGTGTGTCCCCC 25 6 1 ATACGAAATACAGGGAGGTGTTTTT 40 119 1 TTAATTCAACAGGGAGGTGCACAC 26 9 1 TTTGTAATCTAAAGGAGGTGTCC 42 237 1 ATATTTACCAAAAGGAGGTGTTTTT 5 285 1 TTTCGAAAGGAAAGGAGGTGTTGAT 27 92 1 TATCTACCCGCAAGGAGGTGAAGGTGGT 33 282 1 CCCGGAATTTAGAGGAGGTGCACAC 15 74 1 TAAAAATTTACGAGGAGGTGTTTTGT 23 145 1 TTTTAAATAGATGGGAGGGGGGATT 28 5 0 TCTTGGAAAATAAGGAGGTGAAGAGGGGGC 0 262 1 GAAAACAAAACAGGGAGGAGAGTGG 13 65 1 GGCCGAAAAAAGGGGAGGAGGTTTCTCCTC 6 23 0 GTAAGCGCTTACAGGAGGTGCAAACT 45 190 1 CTTTTAAAAGAAAGGAGGAGTAAGGA 36 92 1 AAACATCGAGAAGGGAGGGATTCCT 16 79 1 TCCATACGTTCAGGGAGGGAAAACA 32 45 1 TCCCTAATTTAATGGAGGTGTCTCTGT 19 94 1 TAACTATGGAAGAGGAGGAGAAAGC 12 13 1 GATTTTTTTGTCAGGAGGTGGTATT 22 5 0 AACCTTTCATAAAGGAGGGATACGT 44 14 1 AAATCTTATGTTAGGAGGGGAGAGTT 14 230 1 ATATTGGAAGAAGGGAGGTATTG 39 153 1 CAAATAAATATGGGGAGGGAGGATACCCTC 13 31 0 GGTTTCCTTTCGGGAGGAGAAACCTCCTC 6 9 1 TGGAAGAATTTAAGGAGGGAAAAACGAAAA 24 55 0 CAATAACGGAGGTGTTATTGC 29 4 1 AGAATACTCACACGGAGGTGAGTAGGTC 21 141 1 GGTTCAAATACAAAGAGGGGGTCTCCCCCC 15 40 0 CCCCCGGAAAAGGGGTGGGGATCCCCACCC 34 16 0 TCCGTTAACATTTGGAGGGGGGAGACCCCC 15 24 1 TTAGACTTTGATTGGAGGTGATCGGG 38 6 0 TACCCGGGGTGGGGATCCCCACCC 34 4 1 CACAAAAGCGAAGTGAGGGGGAACCCCC 11 8 0 CCTTCATTTTTCAGGAGGGATAGA 43 24 1 CCAAGCGGTCAAAGGCGGGGGTCTGCAAAA 39 57 1 TGAAAAATGAAGGTGAGGGGAACCCCC 43 7 0 TGAAAAGAACAAAGGAGGAAAAGATCGAAC 30 49 1 AAGTCTAACACAAAGAGGTGCATAGAAGT 38 28 1 GCCGGGGTTTTTTGGAGGTGAACATGG 2 26 1 TTTCAACTTTTTTGGAGGTGAGTTTC 4 65 1 GACACGGGGGTCTGGAGGAGATTGTT 46 55 1 CTGGTGCGTTTGAAGAGGTGAGTGA 41 285 1 CTATGACACCAGTAGAGGGGGGATTTTC 31 136 1 GTGTCCTCCTTCAGGAGGAATCTGCCATTT 8 26 0 TCGAAGAGAACGAAGAGGGAAATTTAGACC 33 97 1 TCCAGATAATCCGAGAGGGAGGCTGGATT 21 9 0 ********** MAP Score: 90.1512 Motif 2 TTTGTACAGTGGTGGTAGTATAATAACGAAG 1 235 1 CACAATATATTGTGGTAAAATCTCAGCAGAT 3 81 1 GGGGGTTTTTTGTGGTACAATTATTATTGAG 4 28 1 TAACACTCCGGGTTGTATAATCGTCAGGGAG 5 11 0 ATGAATATAATGTGATAAAATAAATAAAAAT 10 25 1 ATCGAAAAGATGTGGTAACATCACTGACGTG 14 45 0 ATGAAAATTCGGTGATAAAATCCCTTTGAAG 14 180 1 TTATAACCTATGCGGTATAATTCAAGGGGAA 16 49 1 TAACGACATGGGTGGTAAAATCTTTCCAGAT 21 32 0 AATGTGAGATTATGGTATAATCATGCCAGAT 22 32 0 TTACTCTCCAGGTGATAACATATTGAGGAGA 22 107 1 CAACGATATTTGTGATAAAATTTTTCGAAAG 27 70 1 ATACTCTATCTGTGATATAATGATAGTAAAA 28 58 0 GCAATCTCTGTGTTGTAAAATACTAAGGCAC 28 128 1 AACGTTTACGTATGGTAATATCTACCCGCAA 33 264 1 ATCGGATCTTTGTGGTAGTATTAAATATGAA 36 33 0 CCCTTGCATATGTGGTATTATATTCTATGTG 39 13 1 TTATGAATTGGGTGTTAATATAAACAGACGG 42 54 0 ACGAAAATTCGGTGTTAAAATCCTTAGTGAA 42 176 1 ATTTTTCGGCTGTGATAAAATAAATTCAGCC 46 13 1 ******* *** MAP Score: 31.2703 Motif 3 GCTGATCCGAGAGTTCCCGCCCTCGAGGTAAC 0 83 1 CCTCTCTGGAGAACTCCCGCTCTCCATGGAAA 0 196 1 AGGGGGCAGAGCGCCCCCTCTTCACCTCCTTA 0 272 0 GGGAAGGACCCCCTTCCGGTGAAATCTG 3 107 0 GTACCACAAAAAACCCCCGCGTTGTGCGGGGG 4 14 0 AGGGGAGGAGGTTTCTCCTCCCGAAAGGAAAC 6 11 0 AATCTCACCCCCCATTTTTATTT 10 46 0 GGGGGTTCCCCCTCACTTCGCTTT 11 2 1 GGGGAGGGAGGATACCCTCCCCGAAGGCAATC 13 18 0 AACTCTCCCCTCCTAACATAAGAT 14 232 0 ACAAAGAGGGGGTCTCCCCCCTCCAAATGTTA 15 29 0 GTGTGCACCTCCTCTAAATTCCGG 15 75 0 AGGAATCCCTCCCTTCTCGATGTT 16 80 0 TTTCTTCTCTGATCTCCCTCGCACAGGAAAAC 17 95 1 GAGTATTCTTACTTCCCTGTCCCGGCGCCGGG 21 118 0 CCTATTCCCTCCTTCTCCTCAAT 22 128 0 GGAGGGGGACACACCCCTCCCCATCTTTT 25 7 0 GGAGGGGTGTGTCCCCCTCCCTTTCGAAAGGA 25 19 1 AATCCCCCCTCCCATCTATTTAA 28 1 1 TGCTTCTCTAGTTCTCCCCCCGTGCCTTAGTA 28 148 0 AACATATCCCCCCTTTGAATAGGAT 28 217 0 AAGGGAGGGGGAACCCCTCCCCGAAAGTTCCA 30 13 0 GAAAATCCCCCCTCTACTGGTGTC 31 140 0 TACGGGGCTGGGTCCCCAGCCCCTTCCATACG 32 21 1 TGTTTTCCCTCCCTGAACGTATG 32 47 0 AAGGGGTGGGGATCCCCACCCCGGGTA 34 5 0 TTAGAAACCCCCCTGGTCGTGGTTT 36 3 1 GGGATTTTGCAGACCCCCGCCTTTGACCGCTT 39 59 0 TCGTGGGTTCGAATCCCACCGCCGCCTCCAGA 39 94 1 GGGGGTTCCCCTCACCTTCATTTTT 43 3 1 * ********* MAP Score: 22.9414 Motif 4 TTTGAAAAAGCCTTCAGAAAAGAAACTCGAC 1 101 0 CCATGTTCACCTCCAAAAAACCCCGGCGAT 2 23 0 GAAACTCACCTCCAAAAAAGTTGAAACTA 4 62 0 CATATAAAATCCTCCAGAAATTTATTCCCGA 5 111 1 GGGTTTGTGCCCTCTAAAAAAAAGAACCCCA 5 172 1 GGAGGTTTCTCCTCCCGAAAGGAAACC 6 6 0 ATGGCAGATTCCTCCTGAAGGAGGACAC 8 28 1 GGAATCACCTCACAAAAGCGAAGTGAGG 11 20 0 GTGTGCACCTCCTCTAAATTCCGGGTAA 15 71 0 ACAGAGACACCTCCATTAAATTAGGGATTC 19 91 0 AATACCACCTCCTGACAAAAAAATCTGG 22 7 1 TGTCCCCCTCCCTTTCGAAAGGAGAGAGAGA 25 28 1 CACCTCCTTTCCTTTCGAAAAATTTTATCAC 27 81 0 GGGGGAACCCCTCCCCGAAAGTTCCATGA 30 8 0 TCGACTTTTACGTCCAGAAAACGAATATTTC 33 158 0 GGTGCACCCCCGGAAAAGGGGTGGGGA 34 25 0 CCCGATCACCTCCAATCAAAGTCTAACAC 38 8 1 CCCACCGCCGCCTCCAGAGAGCCAGGCTACA 39 108 1 TCTATCCCTCCTGAAAAATGAAGGTGA 43 21 0 AGTTTGCACCTCCTGTAAGCGCTTACATA 45 187 0 ***** ***** MAP Score: 16.9358 Motif 5 CGGATCAGCGGCCCTCACCTCGGGATCCTGGA 0 60 0 CATCACCGTTGAGACCTTCTCCAAGATCCTCT 0 169 1 TTATTTTCCAAGAATCTCTTCCCATTTCTTTG 0 243 0 TCACCTCCAAAAAACCCCGGCGATCGCCGGGG 2 15 0 CCATCTTTTTAGAATCTCCACCAACAATTTTT 3 29 1 GGGAAGGACCCCCTTCCGGTGAAATC 3 109 0 TGTACCACAAAAAACCCCCGCGTTGTGCGGGG 4 15 0 GAAACTCACCTCCAAAAAAGTTG 4 68 0 AAAAACACCTCCTTTTGGTAAATAT 5 285 0 TTCGGGAGGAGAAACCTCCTCCCCTTTTTTCG 6 18 1 AATCTCACCCCCCATTTTTATT 10 47 0 GGGAGGGAGGATACCCTCCCCGAAGGCAATCA 13 17 0 AACTCTCCCCTCCTAACATAAGA 14 233 0 AAAGAGGGGGTCTCCCCCCTCCAAATGTTAAC 15 27 0 GTGTGCACCTCCTCTAAATTCCGGG 15 74 0 AGGAATCCCTCCCTTCTCGATGTTT 16 79 0 GAACTCTCGGAGAAACACCGCGTGGATCTTCT 17 37 1 ACAGAGACACCTCCATTAAATTAGGGA 19 94 0 ATCCAGGGGGCATACGCCCCCTTTTATTTTTG 20 25 1 AATACCACCTCCTGACAAAAAA 22 0 1 CCTATTCCCTCCTTCTCCTCAATAT 22 126 0 AAACGGGGAGAATCTCTCCCCGTCT 23 3 0 ACAAAACACCTCCTCGTAAATTTTTA 23 145 0 GCTCCAGAAGGAGCCACCCGCTTTCTTGTTTT 24 19 0 GGAGGGGGACACACCCCTCCCCATCTTTT 25 7 0 AATCCCCCCTCCCATCTATTTA 28 0 1 TGCTTCTCTAGTTCTCCCCCCGTGCCTTAGTA 28 148 0 AAAAAACAAAAAGCAACCCATCCAGGGTTGCT 28 176 0 AACATATCCCCCCTTTGAATAGGA 28 218 0 GCAATAACACCTCCGTTATTG 29 4 0 AGGGAGGGGGAACCCCTCCCCGAAAGTTCCAT 30 12 0 GAAAATCCCCCCTCTACTGGTGTCA 31 139 0 AATAACGTTGAAAATCTCCTCGGGATGTCGCT 33 208 1 AGGGGTGGGGATCCCCACCCCGGGTA 34 4 0 TTAGAAACCCCCCTGGTCGTGGTT 36 2 1 AGGGATTTTGCAGACCCCCGCCTTTGACCGCT 39 60 0 CGTGGGTTCGAATCCCACCGCCGCCTCCAGAG 39 95 1 AAAAACACCTCCCTGTATTTCGTAT 40 119 0 CAGCCATTGCGGGACCTCCACCGGTGAGCAGA 41 94 0 GGGGGTTCCCCTCACCTTCATTTTTC 43 4 1 AACAATCTCCTCCAGACCCCCGT 46 58 0 ** ****** ** MAP Score: 15.7387 Motif 6 AAAATCGGATTTTTTCGTGTTTGGTTCTCTT 1 206 1 TCGCCGGGGTTTTTTGGAGGTGAACATGG 2 24 1 CCACCAACAATTTTTTGAGATGTAACTAAAC 3 46 1 AACGCGGGGGTTTTTTGTGGTACAATTATTA 4 23 1 AGTTTCAACTTTTTTGGAGGTGAGTTTC 4 63 1 TTGACAGCGGTTTTTTGAATTGATAGTATTG 5 77 1 GGGGTTCTTTTTTTTAGAGGGCACAAACCCC 5 171 0 CTCACTTCGCTTTTGTGAGGTGATTCC 11 21 1 TATGTGTAATTTTTTAGTGATTCAAATTTGA 23 44 1 AATTTGAAATTTTTTAGAGTTATTTTACTAT 28 36 1 AGATAGAGTATTTTTTGTGTTTCTCTACGAA 28 78 1 ATAGAAAGATTTATTTGTGGTTAATCTTTTC 31 43 1 TAGTGAAACATTTTGTGAATTTTCTGACGGT 42 200 1 GGCTTTTGTTTTTTGTGAGTTTTGATTAAAA 45 48 1 ***** ***** MAP Score: 12.6951 Motif 7 TTGATGAATGTTTTTATTTTTTCCTCTAAAGA 1 271 0 ATGGTGTTTGTTTTTTGTTTTTCAAGAATATT 5 202 1 GATGGGTTGCTTTTTGTTTTTTTCAAAATCAA 28 186 1 TAATCTTTTCTTTTTCTTTTTTTCAACCTTTT 31 64 1 CTGGAGCCACCTTTTCGTTTTTCCCTCCTTAA 24 44 1 TCCGGCCAGCCTTTTAATTTTTTAAGAAGCGT 40 38 1 CATCAGGGGGCTTTTGTTTTTTGTGAGTTTTG 45 40 1 CGCTTTCTTGTTTTTATTTTCTG 24 1 0 TTCTCCCCGTTTTTTGTTCTCTATGTGTAATT 23 23 1 TTCGAAACTGTTTTTTATCTCTACTAATTAGG 33 70 0 GCATACGCCCCCTTTTATTTTTGTGCAAAAAT 20 34 1 AGGAAACTTTTGTTTCCTCTTTTTTTCTAATT 7 68 1 ATCTTTTCCTCCTTTGTTCTTTTCAAGTTAAG 30 42 0 AAAATCGGATTTTTTCGTGTTTGGTTCTCTTT 1 206 1 AGATAGAGTATTTTTTGTGTTTCTCTACGAAG 28 78 1 TGAAGCCGGTTGTTTCTTCTCTGATCTCCCTC 17 83 1 TCACCCCCCATTTTTATTTATTTTATCACATT 10 33 0 ***** ***** MAP Score: 10.3849 Motif 8 AGGAGAAACCTCCTCCCCTTTTTTCGGCCTCCC 6 24 1 AAACTTTTGTTTCCTCTTTTTTTCTAATTTTTC 7 71 1 TTTTCCATTCCTTTCGTTTGTTA 7 148 0 AATCTCACCCCCCATTTTTATTTATTTTATCA 10 37 0 GGGGGTTCCCCCTCACTTCGCTTTTGTGAGGTG 11 10 1 GCTTTCTCCTCCTCTTCCATAGTTAGAG 12 7 0 AGGGTATCCTCCCTCCCCATATTTATTTGCCAC 13 32 1 CCACTCTCCTCCCTGTTTTGTTTTCGTG 13 62 0 AGGGGGTCTCCCCCCTCCAAATGTTAACGGATT 15 22 0 GGGGGAGACCCCCTCTTTGTATTTGAACCATTA 15 41 1 ACTCAGACCTCTCTTTCCTTGAGTTTCTTC 16 7 1 GGGGCATACGCCCCCTTTTATTTTTGTGCAAAA 20 31 1 CCTGTTCTTTCCTTCCTCATATATTTTTGCACA 20 55 0 AATCCAGCCTCCCTCTCGGATTATCTGGAAAG 21 9 1 CGGGGAGAGATTCTCCCCGTTTTTTGTTCTCTA 23 13 1 ACAAAACACCTCCTCGTAAATTTTTAAAATGA 23 139 0 TTTCGTTTTTCCCTCCTTAAATTCTTCCATCAG 24 56 1 GGGGACACACCCCTCCCCATCTTTT 25 2 0 GAGGGGTGTGTCCCCCTCCCTTTCGAAAGGAGA 25 20 1 TCTCTCTCTCCTTTCGAAAGGGA 25 36 0 ATCAACACCTCCTTTCCTTTCGAAAAATTT 27 87 0 AATCCCCCCTCCCATCTATTTAAAATAA 28 5 1 CTCTAGTTCTCCCCCCGTGCCTTAGTATTTTAC 28 142 0 AGGGGTTCCCCCTCCCTTAACTTGAAAAGAACA 30 27 1 GTTCGATCTTTTCCTCCTTTGTTCTTTTCAAGT 30 46 0 GAAAATCCCCCCTCTACTGGTGTCATAGT 31 135 0 GGGTGGGGATCCCCACCCCTTTTCCGGGGGTGC 34 16 1 TCCTTACTCCTCCTTTCTTTTAAAAGAATA 36 88 0 GGGGGTTCCCCTCACCTTCATTTTTCAG 43 5 1 ******** ** MAP Score: 6.42219 Motif 9 CCAAGAATCTCTTCCCATTTCTTTGCGAGATCGTT 0 233 0 TTTTCCATTCCTTTCGTTTGTTATCGTTA 7 142 0 AGTTTCTACCTCCTTCTCTGGATTTTTCAG 9 73 0 AATCTCACCCCCCATTTTTATTTATTTTATCA 10 37 0 CCACTCTCCTCCCTGTTTTGTTTTCGTGGCAAA 13 57 0 AGGGGGGAGACCCCCTCTTTGTATTTGAACCATTA 15 39 1 CTGCGAGAAACTCTCTGTTTCGATTCCGTTTTCCT 17 119 0 GATCCTGCCCCCTTATGTTAAATTCGTTT 18 70 0 AGGGGGCATACGCCCCCTTTTATTTTTGTGCAAAA 20 29 1 AATCCAGCCTCCCTCTCGGATTATCTGGAAAG 21 7 1 GGGAGAGATTCTCCCCGTTTTTTGTTCTCTATGTG 23 15 1 AAGGAGCCACCCGCTTTCTTGTTTTTATTTTCTG 24 9 0 CCTTCTGGAGCCACCTTTTCGTTTTTCCCTCCTTA 24 40 1 TATTTGTGGTTAATCTTTTCTTTTTCTTTTTTTCA 31 54 1 TTCTTTTTTTCAACCTTTTCTTATTCTTGATTTTA 31 77 1 TCCTTACTCCTCCTTTCTTTTAAAAGAATAA 36 87 0 ACTTCTATGCACCTCTTTGTGTTAGACTTTGAT 38 24 0 GCTACACGGCCTGGCTTTTTATATTGGAAGAAGGG 39 133 1 GGCTTCCGGCCAGCCTTTTAATTTTTTAAGAAGCG 40 34 1 TAACACAAATCCGTCTGTTTATATTAACACCCAAT 42 44 1 GGACACCTCCTTTAGATTACAAAGAGTT 42 232 0 GGGGGTTCCCCTCACCTTCATTTTTCAGGAGGGA 43 9 1 * *** *** * ** MAP Score: 6.23459 Motif 10 ATCTCGCAAAGAAATGGGAAGAGATTCTTGG 0 237 1 GGCAAAAGGGGGCAGAGCGCCC 0 288 0 GGAGGCCGAAAAAAGGGGAGGAGGTTTCTCC 6 25 0 GAAAAATTAGAAAAAAAGAGGAAACAAAAGT 7 73 0 AAAATAAATAAAAATGGGGGGTGAGATT 10 41 1 CTCTAACTATGGAAGAGGAGGAGAAAGC 12 10 1 GTGGCAAATAAATATGGGGAGGGAGGATACC 13 34 0 CCACGAAAACAAAACAGGGAGGAGAGTGG 13 61 1 CAGATATCTCAGTAGGGAGGG 14 0 0 GTTAACATTTGGAGGGGGGAGACCCCCTCTT 15 27 1 AGAAACTCAAGGAAAGAGAGGTCTGAGT 16 7 0 GGAAAACATCGAGAAGGGAGGGATTCCT 16 76 1 ACGTCTCTTTGAAAGAGAAAGAACTCTCGGA 17 17 1 AAACGGAATCGAAACAGAGAGTTTCTCGCAG 17 123 1 TTTTTGCACAAAAATAAAAGGGGGCGTATGC 20 34 0 AACATATTGAGGAGAAGGAGGGAATAGG 22 123 1 TAGAGAACAAAAAACGGGGAGAATCTCTCCC 23 15 0 AAAAGATGGGGAGGGGTGTGTCC 25 2 1 TCTCCTTTCGAAAGGGAGGGGGACACACCCC 25 22 0 AAAATTTTTCGAAAGGAAAGGAGGTGTTGAT 27 86 1 TGATTATCTGGAAATAGAAAGATTTATTTGT 31 30 1 TGAAAAAAAGAAAAAGAAAAGATTAACCACA 31 58 0 CTATGACACCAGTAGAGGGGGGATTTTC 31 136 1 CGAAGAGAACGAAGAGGGAAATTTAGACCAA 33 98 1 TCTTTTAAAAGAAAGGAGGAGTAAGGA 36 91 1 TTTTATATTGGAAGAAGGGAGGTATTG 39 149 1 ACTCGCGTTCGAAGGAGGAAGAGGACAGGAC 41 178 1 ATCCCTCCTGAAAAATGAAGGTGAGGGGAAC 43 14 0 **** ****** MAP Score: 5.37927 Motif 11 AAATCGGATTTTTTCGTGTTTGGTTCTCTT 1 207 1 ACGCGGGGGTTTTTTGTGGTACAATTATTA 4 24 1 TGGTGTTTGTTTTTTGTTTTTCAAGAATAT 5 203 1 CCATTCCTTTCGTTTGTTATCGTTAACTAA 7 137 0 TTCTCCCCGTTTTTTGTTCTCTATGTGTAA 23 23 1 TTCGTGAATTTTTCTGTTCTGTATCAAATT 23 68 0 TGGAGCCACCTTTTCGTTTTTCCCTCCTTA 24 45 1 ATATCGTTGACTTTTGTGATTAATTTATGA 27 49 0 AAGTCAACGATATTTGTGATAAAATTTTTC 27 66 1 AAAAATACTCTATCTGTGATATAATGATAG 28 63 0 GATAGAGTATTTTTTGTGTTTCTCTACGAA 28 79 1 GACATGGCAATCTCTGTGTTGTAAAATACT 28 122 1 GATGGGTTGCTTTTTGTTTTTTTCAAAATC 28 186 1 TAGAAAGATTTATTTGTGGTTAATCTTTTC 31 44 1 TAAATTTCCCTCTTCGTTCTCTTCGAAACT 33 93 0 AAAACGAATATTTCTGTGTTTCGTTTACAT 33 142 0 TCTATGCACCTCTTTGTGTTAGACTTTGAT 38 24 0 TAACACCGAATTTTCGTGATGTCAATCTGG 42 163 0 CATCAGGGGGCTTTTGTTTTTTGTGAGTTT 45 40 1 ATACAAAAAATTTCCGTGTTAAATCAAGAT 45 151 0 ********** MAP Score: 5.1951 Motif 12 AGATCCTCTCTGGAGAACTCCCGCTCTCCATG 0 192 1 GGGAAGGACCCCCTTCCGGTGAA 3 112 0 TTTTTTAGAGGGCACAAACCCCATGTTGGATT 5 161 0 TCCTTTCGGGAGGAGAAACCTCCTCCCCTTTT 6 14 1 GGGGGTTCCCCCTCACTTCGCT 11 0 1 CCTTCGGGGAGGGTATCCTCCCTCCCCATATT 13 23 1 TACAAAGAGGGGGTCTCCCCCCTCCAAATGTT 15 30 0 AGGAATCCCTCCCTTCTCGATG 16 82 0 ACTCACTGGAAGCAGCACCTACAAAGTGTTGA 17 177 1 ACAGAGACACCTCCATTAAATTAG 19 97 0 TCAATCCAGGGGGCATACGCCCCCTTTTATTT 20 22 1 CGAAAGGGAGGGGGACACACCCCTCCCCATCT 25 13 0 TTAAGGGAGGGGGAACCCCTCCCCGAAAGTTC 30 15 0 GAAAAGGGGTGGGGATCCCCACCCCGGGTA 34 8 0 TGAAGTTGAAAGCGAAACTTCCGACCAACAGA 41 43 0 TTCCAGCCATTGCGGGACCTCCACCGGTGAGC 41 97 0 GTCCCGCAATGGCTGGAACCACAACTCCTGTT 41 111 1 AATGAAGGTGAGGGGAACCCCC 43 0 0 AGTTTTGATATGGAAAACCTTCAAGCCCCCAT 45 11 1 *** * ****** MAP Score: 1.51006 Motif 13 CGGGAGTTCTCCAGAGAGGATCTTGGAGAA 0 185 0 AACTGTTTTCACGCAGAGTTCGAATAATTC 1 33 1 CCACCACTGTACAAAGAGAACCAAACACGA 1 220 0 AAAACATTCATCAAAGGGGGT 1 289 1 AGCAGATTTCACCGGAAGGGGGTCCTTCCC 3 105 1 CCCCCGCACAACGCGGGGGTTTTTTGTGGT 4 14 1 CGATTATACAACCCGGAGTGTTAACAATCT 5 19 1 CCTGAAAAATCCAGAGAAGGAGGTAGAAAC 9 72 1 ATGATTGCCTTCGGGGAGGGTATCCTCCCT 13 16 1 CGAAAACAAAACAGGGAGGAGAGTGG 13 64 1 GTCTGATACTTCAAAGGGATTTTATCACCG 14 189 0 TTCAAATACAAAGAGGGGGTCTCCCCCCTC 15 38 0 TTGAACCATTACCCGGAATTTAGAGGAGGT 15 63 1 GGGGAAAACATCGAGAAGGGAGGGATTCCT 16 74 1 TTCCAGATAATCCGAGAGGGAGGCTGGATT 21 10 0 CGGCGCCGGGACAGGGAAGTAAGAATACTC 21 120 1 AAGAATACTCACACGGAGGTGAGTAGGTC 21 140 1 CATATTGAGGAGAAGGAGGGAATAGG 22 125 1 AGACGGGGAGAGATTCTCCCCG 23 2 1 AGAACAAAAAACGGGGAGAATCTCTCCCCG 23 13 0 TTAAAAATTTACGAGGAGGTGTTTTGT 23 144 1 TTAATTCAACAGGGAGGTGCACAC 26 8 1 ATGAATTCGTACCCAGAGGTGATGAATA 27 8 0 ATACTAAGGCACGGGGGGAGAACTAGAGAA 28 147 1 CATGGAACTTTCGGGGAGGGGTTCCCCCTC 30 11 1 TTCCATACGTTCAGGGAGGGAAAACA 32 44 1 CATTATTGATTCAGAAGAGTAAAATTACTC 33 36 0 TTCGAAGAGAACGAAGAGGGAAATTTAGAC 33 96 1 TACCCGGGGTGGGGATCCCCACC 34 3 1 GAAACCACGACCAGGGGGGTTTCTAA 36 6 0 AAAGTCTAACACAAAGAGGTGCATAGAAGT 38 27 1 GATACGAAATACAGGGAGGTGTTTTT 40 118 1 TTCAAACGCACCAGAGAGTTTGAAGTTCAC 41 269 0 ACCTTCATTTTTCAGGAGGGATAGA 43 23 1 AGGATACCAGACACGGGGGTCTGGAGGAGA 46 46 1 ********** MAP Score: 0.791983