AlignACE 3.0 10/20/99 AlignACE2 -i TM/TM_operons003_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944251669 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TM0013 161 conserved hypothetical protein #1 TM0023 60 methyl-accepting chemotaxis protein #2 TM0030 62 oligopeptide ABC transporter, permease protein #3 TM0031 24 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #4 TM0032 300 transcriptional regulator, XylR-related #5 TM0122 247 ferric uptake regulation protein #6 TM0399 300 response regulator #7 TM0402 300 ammonium transporter #8 TM0404 47 deoxycytidylate deaminase, putative #9 TM0429 28 methyl-accepting chemotaxis protein #10 TM0431 80 sugar ABC transporter, permease protein #11 TM0432 246 sugar ABC transporter, periplasmic sugar-binding protein, putative #12 TM0470 82 conserved hypothetical protein #13 TM0475 73 pyrazinamidase/nicotinamidase-related protein #14 TM0476 34 hypothetical protein #15 TM0477 82 outer membrane protein alpha #16 TM0478 30 tyrosyl-tRNA synthetase #17 TM0481 300 conserved hypothetical protein #18 TM0521 81 heat shock protein HslV #19 TM0524 209 conserved hypothetical protein #20 TM0526 30 host factor I #21 TM0532 58 oligopeptide ABC transporter, permease protein #22 TM0536 183 hypothetical protein #23 TM0570_TM0571 113 TM0570: cell division protein FtsY, TM0571: heat shock serine protease, periplasmic #24 TM0644 27 hypothetical protein #25 TM0645 59 NH(3)-dependent NAD(+) synthetase, putative #26 TM0703 42 competence-damage inducible protein, putative #27 TM0711 51 hypothetical protein #28 TM0713 44 hypothetical protein #29 TM0717 290 propionyl-CoA carboxylase, gamma subunit #30 TM0826 127 hypothetical protein #31 TM0828 29 sugar kinase, pfkB family #32 TM0839 54 rod shape-determining protein RodA #33 TM0840 39 hypothetical protein #34 TM0842 37 response regulator #35 TM0852 268 conserved hypothetical protein #36 TM0916_TM0917 340 TM0916: conserved hypothetical protein, TM0917: phosphate permease, putative #37 TM0918 34 methyl-accepting chemotaxis protein #38 TM0992 300 hypothetical protein #39 TM1145_TM1146 479 TM1145: conserved hypothetical protein, TM1146: methyl-accepting chemotaxis protein #40 TM1182 73 chromosome segregation SMC protein, putative #41 TM1263 49 phosphate ABC transporter, permease protein #42 TM1264 224 phosphate ABC transporter, periplasmic phosphate-binding protein #43 TM1358 50 conserved hypothetical protein #44 TM1420 255 hypothetical protein #45 TM1428 108 methyl-accepting chemotaxis protein #46 TM1580 118 transcriptional regulator, putative #47 TM1632 62 conserved hypothetical protein #48 TM1655 36 response regulator DrrA #49 TM1656 62 hypothetical protein #50 TM1658 73 S-adenosylmethionine synthetase #51 TM1666 104 succinyl-diaminopimelate desuccinylase, putative #52 TM1682 223 conserved hypothetical protein #53 TM1726 300 alanyl-tRNA synthetase-related protein #54 TM1833 82 methyl-accepting chemotaxis-related protein #55 TM1834 134 alpha-glucosidase #56 TM1836 300 maltose ABC transporter, permease protein Motif 1 AGAATTTGAAGGGGAGGGGAAGATCCCCTC 21 18 0 TATGTGAATAGAGGAGGGGGATTTAC 25 6 0 TCTATCGGGAGGGGATCTTCCCCTC 21 5 1 AACCTTTCGAAGGGAGGGGTAAGAG 23 5 0 AAAATAACTTGAGGAGGTGTTGAACC 18 65 1 AAATAAATATGGGGAGGGAGGATACCCTCC 10 30 0 GCCGAAAAAAGGGGAGGAGGTTTCTCCTCC 8 22 0 ATCTAACGTGTGGGAGGGGATCGGT 40 58 1 CCTTTCTGGCTGGGAGGGGAGGACTCGAAC 6 121 1 ACCCTTGAAAAAGGAGGGGTGAA 22 170 1 AAACACACCACAGGAGGGGTCGTA 36 4 0 GAAAAAATTTAGGGAGGTGTTTAC 51 4 0 TACGAAATACAGGGAGGTGTTTTT 55 120 1 AACTATGGAAGAGGAGGAGAAAGC 9 14 1 AAACCGGCTGGAGGAGGAGAAA 29 278 1 TTTATTCTGAGGGGAGGTAAGATGTT 14 18 1 TCATATCACTGAGGAGGGATCGT 26 29 1 TGATAACTGCAAGGAGGTGAAAAT 40 4 0 AACAAAAGCTAAGGAGGTGAAACAT 44 5 0 AATCTTATGTTAGGAGGGGAGAGTT 11 231 1 AGAACACACCAGGGAGGGAAAAAC 24 13 1 AAAACAAAACAGGGAGGAGAGTGG 10 66 1 GGTTTCCTTTCGGGAGGAGAAACCTCCTCC 8 10 1 CTTACCAGCATGGGAGGTGAAAAC 39 465 1 TATTTACCAAAAGGAGGTGTTTTT 7 286 1 TTAGTGATAAAGGGAGGAGTTCGCA 34 22 1 TACTTGAATCTGGGAGGTGTTTTCA 51 89 1 CATCTTAAATGAGGAGGTGCGAAC 18 4 0 ATTCGTTCCAGAGGAGGTGCATACT 42 5 0 TGTATCACATCAGGAGGGAAAAACCT 35 252 1 ATATCATATTAAGGAGGGATACTC 36 326 1 GATTGCCTTCGGGGAGGGTATCCTCCCTCC 10 18 1 AAACTAAAAGTGGGAGGGATAAATT 43 5 0 CTCCGAGCCCGAAGAGGGGAAGATTGGGAG 52 90 0 AGGGGAAGATTGGGAGGAGGTCAATACATC 52 76 0 AAATCCTGATGTGGAGGTGTCTCTT 42 209 1 ACCACACGAAAGGGAGGAAAGAGGAACGGA 46 10 0 GTCGGGAAACCAGGAGGTAGAAAGG 23 98 1 TGGTGCGTTTGAAGAGGTGAGTGA 56 286 1 AGAAGAGAACGAAGAGGTGATAGCAGTTAT 29 156 1 AAACACAAGGAGGGACTTTCGTCCCT 22 6 1 ATCCCCTGAAGAGGATGGGACTTTTGGTAG 38 22 0 TCAGCGAAAGGAGGATGGGAG 50 62 1 CTACGTCGCCAGAGAGGTGAGAATATGAAA 39 209 1 CGTTTGAAATCTGGAGGTGACAAT 0 147 1 AAAATCTATCCTGGAGGTGATTGG 30 4 0 ACACAAAGTATGGGAGGGACGAAAGTCCCT 22 20 0 ACACCGAAACCGGGAGGGTGAAGCC 37 19 1 CTCGCGTTCGAAGGAGGAAGAGGACAGGAC 56 179 1 AGATAAGAAGCAGGAGGAATATGGA 4 285 1 GCAAAGCACCGGGGATGTGTC 1 1 0 TATCTTGGTGCGAGAGGTGGGACTTGAACC 17 136 0 ATTCAAGAAGGAAGAGGGATTCTCGGAACT 35 67 1 TTTTAAGGTTGAAGAGGGAG 27 41 1 TCTTTATGTCGTGGAGGTAGAAGAGCC 17 283 1 AATTCTGTTCAAAGAGGTGATCTTGC 21 42 1 ACATTTCAGCAGGGAGGTTTCAGAC 45 93 1 ATCAATGAGAAGGGAGGTTTGTCCC 15 67 1 GGGGGATCGGGGGGATGAGGGACACGCAAG 22 69 1 CATATGACAGTGAGAGGTGTTATAATCGAC 0 45 0 ATTCTGAACTTTGGAGGGATTAATA 38 285 1 ********** MAP Score: 94.7344 Motif 2 ACATAAAGAAAAAGAAGAAGGGGAAATTTCCCC 17 259 0 CTCGCGTTCGAAGGAGGAAGAGGACAGGACTTC 56 179 1 GGTGTATCTCAAGGGGGATAGGGGGGTCAACTT 36 201 0 AGATCAGCGAAAGGAGGATGGGAG 50 59 1 GAAAGGGAGGAAAGAGGAACGGA 46 0 0 TGTCTCAAACAATGAAGACTAGGAAAACCCAAC 36 71 1 TTGTTGAAGAAAAGAAGACCAGGTATTCAGAAG 29 128 1 GAGGCCGAAAAAAGGGGAGGAGGTTTCTCCTCC 8 22 0 GAATATGTGAATAGAGGAGGGGGATTTAC 25 6 0 CCAATCCCCTGAAGAGGATGGGACTTTTGGTAG 38 22 0 TCTCTTTCAGAACGAAGAGTCGGCTTAACATTT 42 122 1 TCATCGGGTCAGGGGGGATCGGGGGGATGAGGG 22 57 1 CGCTCCAGACAAAAAAGAAGGGGAAATTTCCCC 17 240 1 GAAAATAGAAAGTGAAGAAAAGGGTCAATGCTC 53 150 1 AGCTCCTTGGAAAGAGCATCGGGAATAAAATCA 4 112 1 AAAAAACTCAAAGGGAGATCAGAGTCCCTATGT 38 110 0 TCTAACTATGGAAGAGGAGGAGAAAGC 9 11 1 AAAAGAATTCAAGAAGGAAGAGGGATTCTCGGA 35 61 1 AGCAGAGAAAAACGAGGATACGAAGCGTGGAAA 29 244 1 AACAGAATTTGAAGGGGAGGGGAAGATCCCCTC 21 18 0 CCCCTGACCCGATGAAGACAAGACACAAAGTAT 22 39 0 GTCTGTGGATAAAGAAAAAGGGGATGCATTGCA 6 85 1 ATTATACCATAATGAAAAAAGGGGCTGAACGCC 45 35 0 AGCCCGAAGAGGGGAAGATTGGGAGGAGGTCAA 52 82 0 GAAGACAAAGATAGAGGAACAGAAAGCGCTGAA 19 160 1 AAATCTGAGTAAAAAAGAGTGGATCAACATAAT 12 10 1 AACGTCTTGAAAAGAAAAAAAGGGGCGTTCAGC 45 12 1 AAACGGAAGCAACGGACAACGGGGCTGATACCG 46 48 1 CTCGAAGAACAAGAAAGAGAAGAGTTCTTCAAG 53 239 1 TTCAGAAGAGAACGAAGAGGTGATAGCAGTTAT 29 153 1 ACGAAAACAAAACAGGGAGGAGAGTGG 10 63 1 GTACAACACTGTGGAGGAACAGAAA 47 47 1 TCTATAACAGAACGGAAAATAGAATTCTACGAA 42 68 0 ** ***** *** MAP Score: 32.5073 Motif 3 TCACATTCACCATAGTCGATTATAACACCTCTCACTGT 0 31 1 AGAATTAATCCCCATTTGATTCTATCACTACATGCAAC 0 103 0 CATCTGCCATCCATTTTCATTATACCATAATACGGTAT 5 94 1 CAAATTTTCACGTCAGTGATGTTACCACATCTTTTCGA 11 37 1 GTCTGATACTTCAAAGGGATTTTATCACCGAATTTTCA 11 181 0 CAGTTAAATCCTGTGGTGATTATACCATCCCGTCCAAA 15 27 0 CGCACCTCCTCATTTAAGATGATACCATTTCCTTTATT 18 13 1 TGTGGTCACCCTCTGGGATTTTAACATGTAGAATATG 25 32 0 CGATCCCTCCTCAGTGATATGATAACACACAGGGGGAT 26 13 0 CAATCACCTCCAGGATAGATTTTAACCCTGGAGACGTT 30 11 1 GGCATCACCTCGTTTTTGATTCTAACCCCAAACCTTTA 30 97 0 CTCCTCCCTTTATCACTAATTTTAACATCGA 34 3 0 CTTTTGAGTGCTAATAATAGTTTAGCACACATTTTAAA 35 26 1 TCCGAAGAGCCCCTTTATTTTGTATCACATCAGGAGGG 35 232 1 TCCTGTGGTGTGTTTTCTATTGTATCACTTTGAACCCT 36 19 1 ATGATATTTGCTGTGTAAATTCTATCACATCGGGCCAC 36 295 0 AAGTTCAGAATTCCTACCATTATAGCATTTGTTCTACG 38 258 0 GCACATTTCCCATGTGTAATTGTACCATCACGATCTCA 39 151 0 TCCCCTCCCACACGTTAGATTTTATCATTGTGGAGTGA 40 40 0 GCACCTCCTCTGGAACGAATTATAGCACAAAACGTTCT 42 15 1 TTTATCCCTCCCACTTTTAGTTTATCATTAAATAGTGG 43 12 1 AATGTAAGAGCCGTTTCTATTATATCACGTTTTTACAG 44 70 1 GATTAACTTAGCACTGGAATTATACCATAATGAAAAAA 45 48 0 CCGTTGCTTCCGTTTCAAATCTTACCACACGAAAGGGA 46 25 0 AGATCTGGTTTCTATACTATTTTAACAT 48 0 0 TCTTATAACAGCCTTGATAGTTTATCACAATCTTTCTT 50 24 0 CCTAAAAAAATATTTGAAATGATACCCCAAGATTTTAT 51 48 0 AAACACCTCCCAGATTCAAGTATATCCTAAAAAAATAT 51 73 0 TCTGTGCGACCTACTAAAGTTTTAGCACTTCTAAGCCA 52 130 1 * * *** ** *** MAP Score: 26.8889 Motif 4 TCAGGGGGTCGTGGGTTCGAATCCCACCCGGGTCACCA 17 31 1 TGAAGCCCGTGTGGGTTCAAGTCCCACCTCTCGCACCA 17 123 1 ATAACCCCGTGCGGGTTCAAGTCCCGCCCTCGGCACCA 35 187 1 GCTGGGGGTCGCGGGTTCGAATCCCGTCGCCCGCTCCA 17 209 1 ATTTGAAGGGGAGGGGAAGATCCCCTCCCGATAGA 21 7 0 AGGATCTAGTGCGGGTTCTGTACGCTTCAGGTTACAGT 39 252 1 ATAAATATGGGGAGGGAGGATACCCTCCCCGAAGGCAA 10 20 0 CAAAGTATGGGAGGGACGAAAGTCCCTCCTTGTGTTT 22 9 0 ATTCTAACTTGCGTGTCCCTCATCCCCCCGATCCCCCC 22 68 0 ACCTCCACCAGCGGATCCAGAGTCCGCCGTCCTACCGT 6 149 1 CTTTTTTTTAGAGGGCACAAACCCCATGTTGGATTAGA 7 158 0 GTTTGTTCTCGTGTGGTATGGTCCCACC 32 0 0 CGAAAAAAGGGGAGGAGGTTTCTCCTCCCGAAAGGAAA 8 12 0 ACAAAAAAGAAGGGGAAATTTCCCCTTCTTCTTTTTCT 17 248 1 ATCCGCTGGTGGAGGTTCGAGTCCTCCCCTCCCAGCCA 6 127 0 CATAATGAAAAAAGGGGCTGAACGCCCCTTTTTTTCTT 45 23 0 TGTGGTTTCAGGGGAAAAGCGTTCCTTCTCCGGAGAAT 39 339 1 ATACAACCCGGAGTGTTAACAATCTTCCCAGTCAAACT 7 24 1 * *** * *** ** MAP Score: 25.9097 Motif 5 AAAACAGAGTGGGGAGTGAGAATTGA 2 46 1 GTTTCCTTTCGGGAGGAGAAACCTCCTCCCC 8 11 1 ACTATGGAAGAGGAGGAGAAAGC 9 15 1 ATCTTATGTTAGGAGGGGAGAGTT 11 232 1 TGACCCGGGTGGGATTCGAACCCACGACCCC 17 35 0 CAGACAAAAAAGAAGGGGAAATTTCCCCTTC 17 245 1 AAGAAAAAGAAGAAGGGGAAATTTCCCCTTC 17 256 0 ACAAAGATAGAGGAACAGAAAGCGCTGAACG 19 164 1 GAATTTGAAGGGGAGGGGAAGATCCCCTCCC 21 16 0 CTCTTTGAACAGAATTTGAAGGGGAGGGGAA 21 27 0 CGGGAAACCAGGAGGTAGAAAGG 23 100 1 AGAACACACCAGGGAGGGAAAAAC 24 13 1 AACCGGCTGGAGGAGGAGAAA 29 279 1 ACTTGACTTTAGAAAGAGAAAGCTGGTACTA 35 94 1 GTATCACATCAGGAGGGAAAAACCT 35 253 1 TCCTCTTCAGGGGATTGGAAGGAGGTCGACT 38 37 1 TACAGATTCAAGGAATTGAAAGAAGTCGACC 38 60 0 AAACTCGCCAAGGTATTGAACGTTGATCCCT 39 383 1 TTACCAGCATGGGAGGTGAAAAC 39 466 1 GATAACTGCAAGGAGGTGAAAAT 40 2 0 GGAGGGATCGAAGCTGAACAGAA 41 2 1 ACAAAAGCTAAGGAGGTGAAACAT 44 3 0 ATCTTTGAAGGTGTTGACAATATCCTTTC 46 99 0 GAATCCCTCCGGAAGGAGACACAACGA 47 6 0 AACACTGTGGAGGAACAGAAA 47 51 1 TCCGAGCCCGAAGAGGGGAAGATTGGGAGGA 52 88 0 AGATGAAAATAGAAAGTGAAGAAAAGGGTCA 53 146 1 AAGGATCTGAAAGGGGCCTGAA 54 1 1 AGTGGTCATCAGAAGCGGAAACGTG 56 4 0 ****** **** MAP Score: 16.2613 Motif 6 CGGACTCTGGATCCGCTGGTGGAGGTTCGAGTCCTCC 6 138 0 GGGAGGCCGAAAAAAGGGGAGGAGGTTTCTCCTCCCG 8 20 0 CTCTAACTATGGAAGAGGAGGAGAAAGC 9 6 1 TGGCAAATAAATATGGGGAGGGAGGATACCCTCCCCG 10 27 0 TTGCCACGAAAACAAAACAGGGAGGAGAGTGG 10 58 1 AAACAAAACCCCCGGCAAGTGCCGGGGGTTGATTTGC 13 21 0 CTGACTTTTAATCAGGGGGTCGTGGGTTCGAATCCCA 17 20 1 ACTCTCGCACCGCTGGTGACCCGGGTGGGATTCGAAC 17 45 0 AGAGTGGCGGAACTGGCAGACGCGCTGGACTTAGAAT 17 77 1 ACCTCTCGCACCAAGATAGAGCAGGCGGGTGTAGCTC 17 148 1 CACCAGCTTGCCAAGCTGGGGGTCGCGGGTTCGAATC 17 195 1 ACTGAGGCCAAGAAGGCGGAAGCATTTC 19 1 1 TATCACAACTATCAGGTGGCACTGGAGAAGCACAATC 19 98 1 TTCATCGGGTCAGGGGGGATCGGGGGGATGAGGGACA 22 56 1 CTTGAAAAACCCTTGAAAAAGGAGGGGTGAA 22 162 1 GCTTAATATTAGTCGGGAAACCAGGAGGTAGAAAGG 23 87 1 TTTCGTTCGGTGGAGACAGCGGTGCTTATCTGGG 28 7 1 AGGTATTCAGAAGAGAACGAAGAGGTGATAGCAGTTA 29 148 1 GTGGAAAAAAACCGGCTGGAGGAGGAGAAA 29 270 1 TACTATATATAATGGAGGGCCGAGGTGGCGGAATGGC 35 120 1 GGGTGTATCTCAAGGGGGATAGGGGGGTCAACTTTCA 36 198 0 TTCGAGCCCGCCAAGGCCGTGGGGGGTGTATCTCAAG 36 221 0 GATAACACCGAAACCGGGAGGGTGAAGCC 37 15 1 TCCTTCCAATCCCCTGAAGAGGATGGGACTTTTGGTA 38 23 0 TAATAAGATCATAGTGTGGTGGGGGTGTTGAAACT 39 8 0 GAAACGGAAGCAACGGACAACGGGGCTGATACCGTGT 46 47 1 ATCAGAAATGCCCCGCAAGGGGGCCAGCTTTCAAAAA 49 21 0 CTGTTATAAGATCAGCGAAAGGAGGATGGGAG 50 51 1 TAAAGTATCTCCGAGCCCGAAGAGGGGAAGATTGGGA 52 91 0 CTACATTTTTACAAGGCGATCGTGATGTATGACTATT 52 168 0 AGGGTCAATGCTCTGGAGAACGTGGTGATCCCCCAGC 53 170 1 TTGGAAAATCCAAAGAAGATAGTGGGGGAAAAG 54 59 1 TATATCTGCTCACCGGTGGAGGTCCCGCAATGGCTGG 56 90 1 AACTCGCGTTCGAAGGAGGAAGAGGACAGGACTTCGG 56 177 1 * ** ** ** ** * MAP Score: 11.6076 Motif 7 TCACTCATAATCATAAAAAATGAGTATTAC 4 203 1 AAAATAAACCCCTTAAAAAAATCGAAGAAC 5 45 1 TAAACAATATTCTTGAAAAACAAAAAACAA 7 209 0 AAAACAAAGATCATAAAGAAAAGAAGCGTC 19 58 0 CCTTAAATTTTCTTGAAAAACCCTTGAAAA 22 151 1 CTTGAAAAACCCTTGAAAAAGGAGGGGTGA 22 162 1 GACAGATGTATCATGAAAAGGGTTCAAAGT 36 45 0 CCTTGACTTCTCCTGAAAAATAGTGAAAAA 44 200 1 AAAACGTCTTGAAAAGAAAAAAAGGG 45 6 1 GCTAAGTTAATCTTCAAAAACATTTCAGCA 45 74 1 TCACAATCTTTCTTAAAAAAAGGTTACA 50 8 0 TTCAAGTATATCCTAAAAAAATATTTGAAA 51 67 0 AATCGCTTGATCTTGAAGAACTCTTCTCTT 53 253 0 TTCAAACGCTTCTTAAAAAATTAAAAGGCT 55 45 0 ********** MAP Score: 8.24097 Motif 8 TTCTTGAAATCGTTTGAAATCTGGAGGTGAC 0 137 1 CTCCCAACGGCCTTTCAAATTATACATCAAG 6 195 1 CACATCTTTTCGATTCAAGTCAATATTTGGT 11 62 1 AGGGGGTCGTGGGTTCGAATCCCACCCGGGT 17 33 1 AAGCCCGTGTGGGTTCAAGTCCCACCTCTCG 17 125 1 TGGGGGTCGCGGGTTCGAATCCCGTCGCCCG 17 211 1 TCTTCCCCTCCCCTTCAAATTCTGTTCAAAG 21 25 1 AACGTCTCCAGGGTTAAAATCTATCCTGGAG 30 18 0 TTGTAATGATCCATACAAGTCCAATTAAAGG 30 72 1 CCCCTCAAATCTAAGACTTTC 33 28 0 AACCCCGTGCGGGTTCAAGTCCCGCCCTCGG 35 189 1 GGGTTCTGTACGCTTCAGGTTACAGTCAGAG 39 264 1 CGTTCCTTTCAAATCGTGAACCTTT 44 240 0 CCGTTGCTTCCGTTTCAAATCTTACCACACG 46 32 0 CTCCTTTCAGATCTGGTTTCTAT 48 23 0 TCCCTCCCTTTAAAATCAGAAATGCCC 49 45 0 CTTTCAGGCCCCTTTCAGATCCTT 54 3 0 CATAAAGGGGCCTTTCAGGCCCCTTTCAGAT 54 14 0 ** ******** MAP Score: 7.60863 Motif 9 AGGAAGATAGATAAGAAGCAGGAGGAATATGGA 4 277 1 GTCTGTGGATAAAGAAAAAGGGGATGCATTGCATCCCCTTTC 6 85 1 TATAATTTGAAAGGCCGTTGGGAGGTCGTCTAACGGTAGGAC 6 177 0 AAGAACAGGGATAGTTCAAGGGGTGGTGTTTCACGTTTTTTT 6 223 1 GGGAGGCCGAAAAAAGGGGAGGAGGTTTCTCCTCCCGAAAGG 8 15 0 TCAATGATGATTGCCTTCGGGGAGGGTATCCTCCCTCCCCA 10 9 1 TTGCCACGAAAACAAAACAGGGAGGAGAGTGG 10 58 1 AAACCCCCGGCAAGTGCCGGGGGTTGATTTGCGGTGGTGTGG 13 11 0 TAACTGTGATCAATGAGAAGGGAGGTTTGTCCC 15 59 1 TCGCACCAAGATAGAGCAGGCGGGTGTAGCTCAGTGGTAGAG 17 153 1 GCTTGCCAAGCTGGGGGTCGCGGGTTCGAATCCCGTCGCCCG 17 200 1 CAAGACACAAAGTATGGGAGGGACGAAAGTCCCTCCTTGTGT 22 12 0 TCTTGTCTTCATCGGGTCAGGGGGGATCGGGGGGATGAGGGA 22 49 1 TACAGAACACACCAGGGAGGGAAAAAC 24 5 1 TGTTAAAATTAGTGATAAAGGGAGGAGTTCGCA 34 14 1 CTTCGGAGCCCCTGTGGTGCCGAGGGCGGGACTTGAACCCGC 35 197 0 GTGTATCTCAAGGGGGATAGGGGGGTCAACTTTCATGCTCCA 36 191 0 CGAGCCCGCCAAGGCCGTGGGGGGTGTATCTCAAGGGGGATA 36 214 0 CACAGCAAATATCATATTAAGGAGGGATACTC 36 318 1 GGTTGATAACACCGAAACCGGGAGGGTGAAGCC 37 11 1 ATAAGATCATAGTGTGGTGGGGGTGTTGAAACT 39 1 0 ATGATAAAATCTAACGTGTGGGAGGGGATCGGT 40 50 1 CGTCTTGAAAAGAAAAAAAGGGGCGTTCAGCCCCTTTTTTCA 45 14 1 CAAATCTTACCACACGAAAGGGAGGAAAGAGGAACGGA 46 6 0 AACGGAAGCAACGGACAACGGGGCTGATACCGTGTTGAGGGT 46 49 1 GATTGATAGAAAAAATTTAGGGAGGTGTTTAC 51 0 0 TTAGGATATACTTGAATCTGGGAGGTGTTTTCA 51 81 1 CTGGTGGATACGAAATACAGGGAGGTGTTTTT 55 112 1 * * ******* * MAP Score: 7.30927 Motif 10 ATATGACAGTGAGAGGTGTTATAATCGACTA 0 43 0 AACAGTCACAAAGTGTTGCATGTAGTGATAG 0 89 1 GACACATCCCCGGTGCTTTGCGCCGGGG 1 7 1 TGCTTTGCGCCGGGGATGTTTCAGAACCATA 1 23 1 ATAGTTCAAGGGGTGGTGTTTCACGTTTTTT 6 233 1 ATTTACCAAAAGGAGGTGTTTTT 7 287 1 TTGGATTTCTCGCCGTTGTTTTTATTTTCAG 12 57 1 GGTTGATTTGCGGTGGTGTGGA 13 1 0 GGCAAGTGCCGGGGGTTGATTTGCGGTGGTG 13 14 0 CGGCACTTGCCGGGGGTTTTGTTTTGTTGTA 13 34 1 AGATAGAGCAGGCGGGTGTAGCTCAGTGGTA 17 161 1 ATCTTAAATGAGGAGGTGCGAAC 18 2 0 AAATAACTTGAGGAGGTGTTGAACC 18 66 1 CCGGCCGTTCACGGGGTGTTTTCAAGGATGT 27 11 1 GCAGTTATCTCAGCGGTGCTTTCGCAGGTAA 29 178 1 CTCCTCCTCCAGCCGGTTTTTTTCCACGCTT 29 266 0 AAATCTATCCTGGAGGTGATTGG 30 2 0 ACGACCCCTCCTGTGGTGTGTTTTCTATTGT 36 11 1 CCAAGGCCGTGGGGGGTGTATCTCAAGGGGG 36 217 0 GCCACATTTGGCGGGGTTTTTATACAAAAAA 36 269 0 CATAGTGTGGTGGGGGTGTTGAAACT 39 5 0 GATAACTGCAAGGAGGTGAAAAT 40 2 0 TTCGTTCCAGAGGAGGTGCATACT 42 3 0 AAAAAATTTAGGGAGGTGTTTAC 51 2 0 ACTTGAATCTGGGAGGTGTTTTCA 51 90 1 TAAGAACACCGAGGGGTGATGAT 52 210 1 ACGAAATACAGGGAGGTGTTTTT 55 121 1 *** ******* MAP Score: 4.56425 Motif 11 AAACATCCCCGGCGCAAAGCACCGGGGATGTGTC 1 4 0 GGAACCCGGCCCCGAAGTGGGGCCGGGAAAAGA 2 3 0 GGCCGGGTTCCACAAAAACAGAGTGGGGAGTGAGAATTGA 2 32 1 GAGTCCTCCCCTCCCAGCCAGAAAGGGGATGCAATGCATC 6 107 0 GGACGGCGGACTCTGGATCCGCTGGTGGAGGTTCGAGTCC 6 141 0 AGTAATAAATATCTAATCCAACATGGGGTTTGTGCCCTCT 7 147 1 TGAAAAACAAAAAACAAACACCATGGGGTTCTTTTTTTTA 7 186 0 TTTGTTTTCGTGGCAAATAAATATGGGGAGGGAGGATACC 10 34 0 AAAATCGAAAATCTTATGTTAGGAGGGGAGAGTT 11 222 1 TCTCGCACCGCTGGTGACCCGGGTGGGATTCGAACCCACG 17 40 0 CGCCTGCTCTATCTTGGTGCGAGAGGTGGGACTTGAACCC 17 135 0 TCGCCCGCTCCAGACAAAAAAGAAGGGGAAATTTCCCCTT 17 235 1 CACGACATAAAGAAAAAGAAGAAGGGGAAATTTCCCCTTC 17 256 0 AAATGGTATCATCTTAAATGAGGAGGTGCGAAC 18 3 0 CACCTCTTTGAACAGAATTTGAAGGGGAGGGGAAGATCCC 21 21 0 GAAGACAAGACACAAAGTATGGGAGGGACGAAAGTCCCTC 22 19 0 TTCATCGGGTCAGGGGGGATCGGGGGGATGAGGGACACGC 22 56 1 TCTTGAAAAACCCTTGAAAAAGGAGGGGTGAA 22 161 1 TACAGAACACACCAGGGAGGGAAAAAC 24 0 1 CCTCAGTGATATGATAACACACAGGGGGATGTT 26 3 0 ACGCGGCTGACTCAAAATCAGCTGGGGGATAACCCCGTGC 35 159 1 CGAGGGCGGGACTTGAACCCGCACGGGGTTATCCCCCAGC 35 179 0 TCAAGTCCCGCCCTCGGCACCACAGGGGCTCCGAAGAGCC 35 203 1 GGGGGTGTATCTCAAGGGGGATAGGGGGGTCAACTTTCAT 36 197 0 CTTTCGAGCCCGCCAAGGCCGTGGGGGGTGTATCTCAAGG 36 220 0 TCCTTCCAATCCCCTGAAGAGGATGGGACTTTTGGTAGCT 38 20 0 AAAGCGCTCGCTGTTAGATACATAGGGACTCTGATCTCCC 38 91 1 TACTAATAAGATCATAGTGTGGTGGGGGTGTTGAAACT 39 8 0 TTTAATGATAAACTAAAAGTGGGAGGGATAAATT 43 4 0 TTTGATATGGAAGGAAAGTAACATGGTAAGAGTGTAATGT 44 35 1 GTTATAAGATCAGCGAAAGGAGGATGGGAG 50 53 1 TCCGAGCCCGAAGAGGGGAAGATTGGGAGGAGGTCAATAC 52 79 0 GATCTTTCTCCGGTAAAACGAACAGGTAAGTATCCAGAAC 53 19 0 GTGTTGGAAAATCCAAAGAAGATAGTGGGGGAAAAG 54 56 1 * * ** * **** * MAP Score: 3.35337 Motif 12 TTCCCGGCCCCACTTCGGGGCCGGGTTCCACAAAAACAG 2 14 1 TGTGGATAAAGAAAAAGGGGATGCATTGCATCCCCTTTC 6 88 1 CCCTTTCTGGCTGGGAGGGGAGGACTCGAACCTCCACCA 6 120 1 AATTTGAAAGGCCGTTGGGAGGTCGTCTAACGGTAGGAC 6 177 0 AACAGGGATAGTTCAAGGGGTGGTGTTTCACGTTTTTTT 6 226 1 GAGGCCGAAAAAAGGGGAGGAGGTTTCTCCTCCCGAAAG 8 16 0 CCCCCGGCAAGTGCCGGGGGTTGATTTGCGGTGGTGTGG 13 11 0 TTAATCAGGGGGTCGTGGGTTCGAATCCCACCCGGGTCA 17 27 1 GGGCTGAAGCCCGTGTGGGTTCAAGTCCCACCTCTCGCA 17 119 1 CCAAGATAGAGCAGGCGGGTGTAGCTCAGTGGTAGAGCA 17 158 1 CCAAGCTGGGGGTCGCGGGTTCGAATCCCGTCGCCCGCT 17 205 1 TCCAGACAAAAAAGAAGGGGAAATTTCCCCTTCTTCTTT 17 243 1 ACTGGAGAAGCACAATCGGTTGATGTCGAAATACCAGGA 19 118 1 ACCGGCCGTTCACGGGGTGTTTTCAAGGATGTTTTA 27 7 1 TCCAATTAAAGGTTTGGGGTTAGAATCAAAAACGAGGTG 30 91 1 TAAAATTAGTGATAAAGGGAGGAGTTCGCA 34 17 1 GGGGATAACCCCGTGCGGGTTCAAGTCCCGCCCTCGGCA 35 183 1 TCTCAAGGGGGATAGGGGGGTCAACTTTCATGCTCCATG 36 189 0 GCCCGCCAAGGCCGTGGGGGGTGTATCTCAAGGGGGATA 36 214 0 ATAAAATCTAACGTGTGGGAGGGGATCGGT 40 53 1 GTGGTAAAATCCTGATGTGGAGGTGTCTCTT 42 203 1 AGAAATGCCCCGCAAGGGGGCCAGCTTTCAAAAACAGCA 49 16 0 GGATATACTTGAATCTGGGAGGTGTTTTCA 51 84 1 CGAAGAGGGGAAGATTGGGAGGAGGTCAATACATCTTGA 52 72 0 AAGCGATTGAAAGAAAGGGTGCAGGTTGGAAGAAG 53 275 1 ACATATATCTGCTCACCGGTGGAGGTCCCGCAATGGCTG 56 87 1 * **** ** ** * MAP Score: 1.6024 Motif 13 GATGATTGCCTTCGGGGAGGGTATCCTCCC 10 15 1 CCAAAATTTATTCTGAGGGGAGGTAAGATG 14 12 1 TCTATCGGGAGGGGATCTTCCCC 21 3 1 GTCAGGGGGGATCGGGGGGATGAGGGACAC 22 64 1 AGCGGTGCTTATCTGGGAGTCATAGGG 28 27 1 AAAGTCTTAGATTTGAGGGG 33 29 1 TACACAGATTTTCTGAGAGGATATGTGTTT 38 152 1 TTTGTTTTTGATATGGAAGGAAAGTAACAT 44 29 1 GAGGGTCCTCATCAGAAAGGATATTGTCAA 46 85 1 TAGAAACCAGATCTGAAAGGAG 48 24 1 ATATACTTGAATCTGGGAGGTGTTTTCA 51 86 1 AAGGATCTGAAAGGGGCCTGAAAG 54 4 1 ********** MAP Score: 1.36242 Motif 14 AGGTTCGAGTCCTCCCCTCCCAGCCAGAAA 6 123 0 GAGGAGAAACCTCCTCCCCTTTTTTCGGCC 8 23 1 GGGAGGGGATCTTCCCCTCCCCTTCAAATT 21 16 1 GTAAATCCCCCTCCTCTATTCACATAT 25 7 1 TACGACCCCTCCTGTGGTGTGTTTT 36 5 1 AGTTGACCCCCCTATCCCCCTTGAGATACA 36 202 1 TACCAAAAGTCCCATCCTCTTCAGGGGATT 38 23 1 AGTATGCACCTCCTCTGGAACGAATT 42 6 1 TCCTCCCAATCTTCCCCTCTTCGGGCTCGG 52 88 1 ********** MAP Score: 0.874466