AlignACE 3.0 10/20/99 AlignACE2 -i TM/TM_operons004_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944251742 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TM0030 62 oligopeptide ABC transporter, permease protein #1 TM0031 24 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #2 TM0032_TM0033 358 TM0032: transcriptional regulator, XylR-related, TM0033: hypothetical protein #3 TM0034 87 iron-sulfur cluster-binding protein #4 TM0035 88 hypothetical protein #5 TM0059 28 oligopeptide ABC transporter, permease protein #6 TM0060 300 oligopeptide ABC transporter, permease protein #7 TM0071 219 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #8 TM0072 76 oligopeptide ABC transporter, permease protein #9 TM0300 237 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative #10 TM0301 64 oligopeptide ABC transporter, permease protein #11 TM0309 300 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #12 TM0460 64 oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative #13 TM0470 82 conserved hypothetical protein #14 TM0475 73 pyrazinamidase/nicotinamidase-related protein #15 TM0476 34 hypothetical protein #16 TM0477 82 outer membrane protein alpha #17 TM0478 30 tyrosyl-tRNA synthetase #18 TM0481 300 conserved hypothetical protein #19 TM0503 300 oligopeptide ABC transporter, permease protein #20 TM0521 81 heat shock protein HslV #21 TM0524 209 conserved hypothetical protein #22 TM0526 30 host factor I #23 TM0532 58 oligopeptide ABC transporter, permease protein #24 TM0711 51 hypothetical protein #25 TM0713 44 hypothetical protein #26 TM0717 290 propionyl-CoA carboxylase, gamma subunit #27 TM1066 61 oligopeptide ABC transporter, permease protein #28 TM1067 243 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #29 TM1068 24 alpha-glucosidase, putative #30 TM1069 107 transcriptional regulator, DeoR family #31 TM1149 43 oligopeptide ABC transporter, permease protein #32 TM1153 25 oligopeptide ABC transporter, permease protein #33 TM1155 82 glucose-6-phosphate 1-dehydrogenase #34 TM1198 69 oligopeptide ABC transporter, permease protein #35 TM1199 154 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #36 TM1203 60 maltose ABC transporter, permease protein #37 TM1204 300 maltose ABC transporter, periplasmic maltose-binding protein #38 TM1222 55 oligopeptide ABC transporter, permease protein #39 TM1223 131 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein #40 TM1225 52 conserved hypothetical protein #41 TM1227 158 endo-1,4-beta-mannosidase #42 TM1234 42 sugar ABC transporter, permease protein #43 TM1235 22 conserved hypothetical protein #44 TM1744 84 L-allo-threonine aldolase #45 TM1745 78 hypothetical protein #46 TM1746 267 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein Motif 1 GGAGGGGGAACCCCTCCCCGAAAGTTCCAT 34 12 0 AGGGGATCTTCCCCTCCCCTTCAAATTCTG 23 19 1 CCGAGGTCCCCACCTCCTCGTAAAAAAGGT 19 113 0 CCAGTACACCTCCTCGAAAATTGTTT 6 284 0 GGGTGGGGATCCCCACCCCGGGTA 42 4 0 TTTTTTAAAACCCCGCCCCGAGGGGCGGGG 38 18 0 GGAGGGGTTCCCCCTCCCTTAACTTGAAAA 34 25 1 ACAACATCCCCTCCTTTAAATGGATGT 46 250 0 GTGTGCACCTCCCTGTTGAATTAA 29 9 0 ACCACCTTCACCTCCTTGCGGGTAGATA 37 282 0 ACTTCCACCTCCTCTTCAGAGTCTC 45 63 0 GGGTGGGGATCCCCACCCCTTTTCCGGGGG 42 16 1 AATGATGACCCCGCCCCTCGGGGCGGGG 38 8 1 GGTTCAACACCTCCTCAAGTTATTTTA 20 64 0 GTTCGCACCTCCTCATTTAAGATGA 20 5 1 GAAAACTCACCTCCCTTGATTGTATGT 7 202 0 TGTTTTCCCTCCCTGAACGTATGGA 36 45 0 ATCAACACCTCCTTTCCTTTCGAAA 30 92 0 CATTCCCCCGCCCCAGACGGGGCGG 10 5 1 CTGGTACACCTCCTGGTCGTAAATTG 19 284 0 AGGGAGGGAGGCCCTCCCCTATCGT 27 5 0 AGGGGAAGATCCCCTCCCGATAGA 23 4 0 CTCCCCCCTCGATGTGATTTC 22 19 0 GGGGAGGGCCTCCCTCCCTTTTATTTACAC 27 16 1 TCAAAGAAGAGCCCGCCCCGTCTGGGGCGG 10 17 0 GTGAATCCCTCCTTTTTTGAGAATT 3 72 0 GGTATCTGCCCTCCTTTTCTCTTTAAA 8 59 0 ATTTTCCCCCACCCTCTTGGGTGGGG 40 6 1 AACATCTTACCTCCCCTCAGAATAAAT 15 17 0 TAACTGCTATCACCTCTTCGTTCTCTTCTG 26 155 0 GAAAATCCCCCCTCTACTGGTGTCA 35 139 0 CTTTTCCCGGCCCCACTTCGGGGCCGGGTT 0 11 1 TGGGTTCAAGTCCCACCTCTCGCACCAAGA 18 134 1 CCATGCTTCCCTCCTTAGATTTAGAGC 40 35 0 TCCAACCACCTCCTGAATTAGTCTAG 44 6 1 GATTTACCACCTCGTTCTATCTAA 27 47 0 AAAAACACCCCCTTAAAAAAAAGTT 9 222 0 AAGAACACCCCCTTAAAAGAGTATG 39 116 0 AACCCGCGACCCCCAGCTTGGCAAGCTGGT 18 196 0 TTCACAATAAGACCTCCTCATAAGGTTTGC 4 30 0 GCAAGATCACCTCTTTGAACAGAATTT 23 41 0 AATTCTCACTCCCCACTCTGTTTTTGTGGA 0 40 0 GGTCTAAATTTCCCTCTTCGTTCTCTTCGA 37 97 0 TTATTCTTTGTCCCACCTTTTTTACGAGGA 19 99 1 TGGGTTCGAATCCCACCCGGGTCACCAGCG 18 42 1 GATCTCACCTGCCTTTCTGGATTTT 33 67 0 ACTCCCGCCGCCCCTTCCCGGGGCG 31 5 1 CACTGAGCTACACCCGCCTGCTCTATCTTG 18 159 0 CCCCCCTTTTAAGGAATTTT 33 0 1 GGGGCTGGGTCCCCAGCCCCTTCCATACGT 36 24 1 ACCGATACCTCCCGTTAATTAGTAA 41 143 0 AGTGGTAGAGCACCAGCTTGCCAAGCTGGG 18 185 1 GTTGTTGCCTCCCTGTACTCTTCTC 9 5 1 GACTCCTACCTCCTTCTTTTTTTAAA 38 39 0 GGGGTTGTCCCCCCGGCCCCCTGTTTGAAA 8 23 0 CTCGTGATTATACCCCCTTTGATGCAGAAT 2 17 1 ACCACCCCCTGCGTTATAGAAT 28 231 0 CGAACCCGTTCGCCCCCTGGTTTATCAATC 19 171 1 CTCCCTCTTCAACCTTAAAAC 24 40 0 CCTCAAGAGAGCCCTGCTGGGCTCTCTTTT 3 41 1 ********** MAP Score: 98.1416 Motif 2 TTTATCCATATACAAAGGAGGT 1 12 1 TGAATTCTGCATCAAAGGGGGTATAATCACG 2 19 0 CCGATGCTCTTTCCAAGGAGCTCAAGACATT 2 161 0 TATAATTTCTTTCTGAGGAAGATAGATAAGA 2 320 1 GTGGCAAACCTTATGAGGAGGTCTTATTGTG 4 27 1 GTAGAATTCATTCCAAGAAGGAACGATGTAA 6 227 1 CGAAAACAATTTTCGAGGAGGTGTACTGG 6 281 1 ATAACATACAATCAAGGGAGGTGAGTTTTC 7 199 1 GTAAAATATTTTCAAACAGGGGGCCGGGGGG 8 14 1 CAAAACTTTTTTTTAAGGGGGTGTTTTT 9 219 1 TGAAAAAGCCTTCAGAAAAGAAACTCGACGT 11 99 0 AAAAACATTCATCAAAGGGGGT 11 288 1 CATCACATTTTTGGAAAGGGGGTTTCGCT 12 45 1 CCAAAATTTATTCTGAGGGGAGGTAAGATGT 15 12 1 ACAGCTTTCGTTCTAACGAGGTGATGGG 17 12 1 TTGGCTGGGCTTCGGAAGAGGGCGTGAGAGA 19 10 0 CCCACCTTTTTTACGAGGAGGTGGGGACCTC 19 110 1 CTCGGCTCGCTTCCCAGGGGACTCCATCCCC 19 138 1 TTGAAATCACATCGAGGGGGGAG 22 17 1 TCTATCGGGAGGGGATCTTCCCCT 23 3 1 TTGAACAGAATTTGAAGGGGAGGGGAAGATC 23 23 0 AGACCAGGTATTCAGAAGAGAACGAAGAGGT 26 143 1 ATCATTCTATAACGCAGGGGGTGGT 28 228 1 TTAAAATTCCTTAAAAGGGGGG 33 1 0 TCATGGAACTTTCGGGGAGGGGTTCCCCCT 34 9 1 TCTTTTCAAGTTAAGGGAGGGGGAACCCCTC 34 26 0 ACTTGAAAAGAACAAAGGAGGAAAAGATCGA 34 46 1 TAAAAAACAGTTTCGAAGAGAACGAAGAGGG 37 85 1 TCAAGCGACATCCCGAGGAGATTTTCAACGT 37 212 0 AATCTTGATAATCCCGGGAGACTGGATTTGG 39 39 1 TCTCATACTCTTTTAAGGGGGTGTTCTT 39 113 1 GGGGCTCTAAATCTAAGGAGGGAAGCATGG 40 32 1 TTAACATCCATTTAAAGGAGGGGATGTTGT 46 247 1 *** ******* MAP Score: 18.8281 Motif 3 TCGTGATTATACCCCCTTTGATGCAGAATTCACTT 2 18 1 AAATTAACCAACCTTCTTTTGGGAAATTATATCAC 6 15 1 AACATGAAACCTCCTTCTCTATGATTTAACGAA 7 8 1 GAAAACTCACCTCCCTTGATTGTATGTTATATTT 7 195 0 AAAAACACCCCCTTAAAAAAAAGTTTTGTTT 9 216 0 ACCCCCTTTGATGAATGTTTTTATT 11 285 0 AGCGAAACCCCCTTTCCAAAAATGTGATGAC 12 43 0 GGGAAATTTCCCCTTCTTTTTTGTCTGGAGCGGGC 18 237 0 ACTCCCGCCGCCCCTTCCCGGGGCGGCTTTCGG 31 8 1 CCCCCCTTTTAAGGAATTTTAACAC 33 0 1 CTGGGTCCCCAGCCCCTTCCATACGTTCAGGGAGG 36 28 1 ACCACCTTCACCTCCTTGCGGGTAGATATTACCA 37 276 0 AAGAACACCCCCTTAAAAGAGTATGAGATCG 39 110 0 ATTTTCCCCCACCCTCTTGGGTGGGGCTCTAAATC 40 10 1 CCATGCTTCCCTCCTTAGATTTAGAGCCCCACC 40 29 0 TGGGGATCCCCACCCCTTTTCCGGGGGTGCACC 42 19 1 ******** * * MAP Score: 18.1328 Motif 4 ATTTGAACTATAATTCGAAATAATTCCTGTTAT 2 228 1 GAGGAGGTCTTATTGTGAAAAAACTTATTTTGA 4 41 1 AAAACGAAGATATTCTGCAATAATTTCTGCTAT 6 135 1 AAAACGACAATATTTTGAAATAATCTTTTACAA 7 81 1 TATTTCTTTTTAATTTGAAATAATCGTCTTTTT 9 129 1 TTCTATTTTGAAATCACATCGAGGGG 22 3 1 AATGGAGAACAAATACAGAATAAGAAATACAAA 26 58 0 AAAACTAATATAATCAATAATAATCAACCATAT 28 82 1 TTTTACCACGAAATGAGGAATAACTAATTTCCT 33 37 0 CGTTCACGTAAAATCAAGAATAAGAAAAGGTTG 35 87 0 TCCAGGAAATTATTTGGAAATAACGTTGAAAAT 37 190 1 TTGTTGCAAATAATCAGAAATAAATCTTGATAA 39 17 1 TTTTAGATTCTAATCGGAAATAATTGCTCACTT 41 12 1 GAAATGACAATAATTCAAAATAAATGGATATAT 46 100 1 TGATTTCTAATATTGCGGAATAATTACTCTTCA 46 140 1 **** * ***** MAP Score: 16.3834 Motif 5 CTATGATTTAACGAAAATATAATACCAGAAAGGAA 7 28 1 AGAACAAAGGAGGAAAAGATCGAAC 34 54 1 AACAGGAAAAAATTTCACGTTTTTTTCA 45 3 1 ATTTCCCGAAAGGAAAAAATATAACATACAATCAA 7 179 1 AAAAAAGAAAAAGAAAAGATTAACCACAAATAAAT 35 51 0 ATTTTTTGTAAAGAAAAAATTGAGCTTCTTCGATA 6 59 1 ATTTCTTTAGAGGAAAAAATAAAAACATTCATCAA 11 268 1 TTGTAACTCAAAGAAAATATTAGAATTTGAACTAT 2 204 1 TAAGATTACTATGAAAACATTTTCATTCAAAATCT 9 164 0 TAAATGTGATATGAAAAAATATGGAACGATAAGTT 9 90 1 CAGGGTCATCGAGAAAAAATGTACCATTCGGACTT 41 93 0 AATACCAGAAAGGAAAAAAGAGAAAAAAGAAGAAA 7 48 1 AGAACCAAACACGAAAAAATCCGATTTTCTGGAAT 11 199 0 ACCTTCTTTTGGGAAATTATATCACCCTAAAGTTA 6 25 1 AGTTTTTCTCGGGAAAAGAGAAACCCGCTGTTGTT 26 98 1 AGTCGATTCCAGGAAATTATTTGGAAATAACGTTG 37 183 1 CTTCCTCAGAAAGAAATTATAACGATATGACTCAA 2 306 0 CGAACTCTGCGTGAAAACAGTTTCATGATAATCTT 11 20 0 CTTCTTCGATAAGAAATTATACCATTATTGTGAAA 6 83 1 GGCCCCCTGTTTGAAAATATTTTACATCA 8 4 0 * ***** ** ** MAP Score: 15.7264 Motif 6 TCTTTTCCCGGCCCCACTTCGGGGC 0 5 1 TTTTGTGGAACCCGGCCCCGAAGTGGGGCC 0 19 0 CAATTCTCACTCCCCACTCTGTTTTTGTGG 0 41 0 GAAAACTCACCTCCCTTGATTGTATG 7 203 0 GGGTTGTCCCCCCGGCCCCCTGTTTGAAAA 8 22 0 GGGGGGACAACCCCCGGTCCTTTAAAGAGA 8 39 1 CATTCCCCCGCCCCAGACGGGG 10 2 1 AAAGAAGAGCCCGCCCCGTCTGGGGCGGGG 10 15 0 CGCAAATCAACCCCCGGCACTTGCCGGGGG 14 20 1 GGATTCGAACCCACGACCCCCTGATTAAAA 18 25 0 TGGGTTCAAGTCCCACCTCTCGCACCAAGA 18 134 1 GGATTCGAACCCGCGACCCCCAGCTTGGCA 18 203 0 CGGGTTCGAATCCCGTCGCCCGCTCCAGAC 18 220 1 TCTCTCACGCCCTCTTCCGAAGCC 19 4 1 GCCGAGGTCCCCACCTCCTCGTAAAAAAGG 19 114 0 CCCCGTCGAACCCGTTCGCCCCCTGGTTTA 19 165 1 CTCCCCCCTCGATGTGATTTC 22 19 0 GAGGGGAAGATCCCCTCCCGATAGA 23 5 0 GAGGGGATCTTCCCCTCCCCTTCAAATTCT 23 18 1 AGGGAGGGAGGCCCTCCCCTATCGT 27 5 0 ACCACCCCCTGCGTTATAGAA 28 232 0 ACTCCCGCCGCCCCTTCCCGGG 31 2 1 GGAGGGGGAACCCCTCCCCGAAAGTTCCAT 34 12 0 GGGGAGGGGTTCCCCCTCCCTTAACTTGAA 34 23 1 GAAAATCCCCCCTCTACTGGTGTCA 35 139 0 CGGGGCTGGGTCCCCAGCCCCTTCCATACG 36 23 1 TGTTTTCCCTCCCTGAACGTATGGA 36 45 0 AATGATGACCCCGCCCCTCGGGGCGGG 38 7 1 TTTTTTAAAACCCCGCCCCGAGGGGCGGGG 38 18 0 ATTTTCCCCCACCCTCTTGGGTGG 40 4 1 AGATTTAGAGCCCCACCCAAGAGGGTGGGG 40 16 0 GGGTGGGGATCCCCACCCCGGGTA 42 4 0 GGGGTGGGGATCCCCACCCCTTTTCCGGGG 42 15 1 ACTTCCACCTCCTCTTCAGAGTCT 45 64 0 CCCTCTTTCCCCACACCCCGGCGGGCC 46 7 1 ACAACATCCCCTCCTTTAAATGGATG 46 251 0 ********** MAP Score: 14.3132 Motif 7 ACCTCCTTTGTATATGGATAAAGG 1 8 0 ATCGTTATAATTTCTTTCTGAGGAAGATAGATAA 2 315 1 GTGAATCCCTCCTTTTTTGAGAATTAAAAAGA 3 65 0 ATTAACCAACCTTCTTTTGGGAAATTATATCACC 6 17 1 AATTTGAAAGTTCCTTTCACAATAATGGTATAAT 6 98 0 TGGTGCTTGATTTCTTTTGATGTGATAGTGTAGA 6 198 1 TGTTATATTTTTTCCTTTCGGGAAATATTTTAAT 7 171 0 GAAAACTCACCTCCCTTGATTGTATGTTATATTT 7 195 0 TGCCCTCCTTTTCTCTTTAAAGGACCGGGGGTTG 8 46 0 AAAAACAAAACTTTTTTTTAAGGGGGTGTTTTT 9 214 1 TAACGTCGAGTTTCTTTTCTGAAGGCTTTTTCAA 11 97 1 AACGAAGAAATTTCTTTAGAGGAAAAAATAAAAA 11 259 1 ACCCCCTTTGATGAATGTTTTTATT 11 285 0 AGCGAAACCCCCTTTCCAAAAATGTGATGACT 12 42 0 TTGATCCACTCTTTTTTACTCAGATTT 13 3 0 ACTCTTGAATTTCCTTTGGACGGGATGGTATAAT 16 13 1 ATTTCCCCTTCTTTTTTGTCTGGAGCGGGCGACG 18 233 0 TTTGTCCCACCTTTTTTACGAGGAGGTGGGGACC 19 105 1 ATGATACCATTTCCTTTATTTGAGAAATTGAGTT 20 31 1 GCAAGATCACCTCTTTGAACAGAATTTGAAGGG 23 35 0 CAGCGGGTTTCTCTTTTCCCGAGAAAAACTTCAA 26 94 0 TTTTTCTCTGCTTTTTTTCACAGAAACTATTCTG 26 222 0 AACACCTCCTTTCCTTTCGAAAAATTTTATCACA 30 80 0 CCCCCCTTTTAAGGAATTTTAACAC 33 1 1 CTCCTACCTCCTTCTTTTTTTAAAACCCCGCCCC 38 29 0 CGATCTCATACTCTTTTAAGGGGGTGTTCTT 39 110 1 TTTTCCCCCACCCTCTTGGGTGGGGCTCTAAATC 40 11 1 GGGATCCCCACCCCTTTTCCGGGGGTGCACC 42 21 1 GTGGGCCCGTTTTTTTTTCAAAGATTCATCTTCC 46 41 1 ACAACATCCCCTCCTTTAAATGGATGTTAATAAA 46 243 0 ******* *** MAP Score: 12.7854 Motif 8 AGTGAAAAATCATACACCTCAAGAGAGCCC 3 25 1 CCAGTACACCTCCTCGAAAATTGTT 6 285 0 CGTTATTATACTACCACCACTGTACAAAGA 11 233 0 AACATCTTACCTCCCCTCAGAATAAA 15 18 0 CGGGATGGTATAATCACCACAGGATTTAAC 16 33 1 CCCATCACCTCGTTAGAACGA 17 19 0 GGCTCTTCTACCTCCACGACATAAAGA 18 283 0 GCCGAGGTCCCCACCTCCTCGTAAAAAAGG 19 114 0 GTTCGCACCTCCTCATTTAAGATGATA 20 7 1 TTCTCGTGAGCTATCACAACTATCAGGTGG 21 87 1 TCTCTATCACCTCTAAGAGCTTC 21 196 0 GAGATAACTGCTATCACCTCTTCGTTCTCT 26 159 0 GATTTACCACCTCGTTCTATCTA 27 48 0 TATTCATCACCTCTGGGTACGAA 30 3 1 ATCAACACCTCCTTTCCTTTCGAA 30 93 0 AAGAAAAGATTAACCACAAATAAATCTTTC 35 46 0 AAAGTTTTCACAATCACAACACAAGAGTAA 37 12 1 ACCACCTTCACCTCCTTGCGGGTA 37 286 0 GACTCCTACCTCCTTCTTTTTTTAA 38 40 0 TATGAGATCGCTATCTCCACGTGTAAATGT 39 90 0 TCCAACCACCTCCTGAATTAGT 44 2 1 CCTGTCACCTCCCACACGATT 44 73 0 ACTTCCACCTCCTCTTCAGAGTCT 45 64 0 AAAGATTCATCTTCCACCACGCACTTAACC 46 60 1 ********** MAP Score: 12.601 Motif 9 TATGTTGTAATTTTAACAAAAAATAACGGCAAC 2 56 1 ATAACAGGAATTATTTCGAATTATAGTTCAAAT 2 228 0 GAGGAGGTCTTATTGTGAAAAAACTTATTTTGA 4 41 1 CTCAATTTTTTCTTTACAAAAAATAACTTTAGG 6 50 0 TGGTATAATTTCTTATCGAAGAAGCTCAATTTT 6 74 0 TTGTAAAAGATTATTTCAAAATATTGTCGTTTT 7 81 0 TGCGTAAATGTGATATGAAAAAATATGGAACGA 9 86 1 TATTTCTTTTTAATTTGAAATAATCGTCTTTTT 9 129 1 TCCTTATGTCTAATCTCAAAGAAGAGCCCGCCC 10 29 0 AAAAATCCGATTTTCTGGAATTATTCGCAACTA 11 187 0 GGTGGTAGTATAATAACGAAGAAATTTCTTTAG 11 245 1 CACAATCGGTTGATGTCGAAATACCAGGAATTG 21 128 1 CCCCTCGATGTGATTTCAAAATAGAA 22 3 0 AAAATAATCCTAATATCGAACTATAAGAGATAA 28 115 0 GTTATCAATATAATATCAACAAACATACAACAA 28 167 0 TTACAGGTGATTATCTGGAAATAGAAAGATTTA 35 23 1 TCTGAATCAATAATGTCAACCTAATTAGTAGAG 37 51 1 TTCCAGGAAATTATTTGGAAATAACGTTGAAAA 37 189 1 * ** ***** ** MAP Score: 9.62156 Motif 10 AAGAGAGCCCAGCAGGGCTCTCTTGAGGTGT 3 38 0 TTGGGATAATGGAGGTTATCTGCACTTGTAA 7 108 0 GCAAGTGCCGGGGGTTGATTTGCGGTGGTGT 14 13 0 CCGGCACTTGCCGGGGGTTTTGTTTTGTTGT 14 33 1 AGTTAAATCCTGTGGTGATTATACCATCCCG 16 33 0 AGCTTGGCAAGCTGGTGCTCTACCACTGAGC 18 181 0 TTTACGAGGAGGTGGGGACCTCGGCTCGCTT 19 119 1 TCTATCGGGAGGGGATCTTCCCCTCCCC 23 7 1 TTCTGTTCAAAGAGGTGATCTTGC 23 44 1 CGGCCGTTCACGGGGTGTTTTCAAGGATGTT 24 12 1 CGGTGGAGACAGCGGTGCTTATCTGGGAGTC 25 17 1 CAGTTATCTCAGCGGTGCTTTCGCAGGTAAT 26 179 1 ACGATAGGGGAGGGCCTCCCTCCCTTTTA 27 8 1 GCGCCCCATAAGGGGCGCTTTTTTGTTGTAA 28 33 1 CGAAAGGAAAGGAGGTGTTGAT 30 95 1 GCCCCTTCCCGGGGCGGCTTTCGGAGGTGCC 31 19 1 GGCGGCTTTCGGAGGTGCCGTG 31 31 1 ACACCAGTAGAGGGGGGATTTTC 35 141 1 AGCGACATCCCGAGGAGATTTTCAACGTTAT 37 209 0 CGCCCCTCGGGGCGGGGTTTTAAAAAAAGAA 38 21 1 ACTCTTTTAAGGGGGTGTTCTT 39 119 1 CACCCTCTTGGGTGGGGCTCTAAATCTAAGG 40 19 1 TACCCGGGGTGGGGATCCCCACCCCTTT 42 7 1 TCCATTTAAAGGAGGGGATGTTGT 46 253 1 ** ******** MAP Score: 4.90749 Motif 11 TTAATTCTCAAAAAAGGAGGGATTCAC 3 70 1 TCAAATTAGAAAAACGAAGATATTCTGCAA 6 125 1 ATACCAGAAAGGAAAAAAGAGAAAAAAGAA 7 49 1 AAAAAAGAGAAAAAAGAAGAAAAACGACAA 7 61 1 CCTTTAAAGAGAAAAGGAGGGCAGATACC 8 57 1 GCTCCAGACAAAAAAGAAGGGGAAATTTCC 18 241 1 CGACATAAAGAAAAAGAAGAAGGGGAAATT 18 264 0 AGCCAACTTCGGAGAGGACGGCCGCTTATC 19 35 1 AACAGAATTTGAAGGGGAGGGGAAGATCCC 23 21 0 GTTTTTCTCGGGAAAAGAGAAACCCGCTGT 26 99 1 TGTTGTTGAAGAAAAGAAGACCAGGTATTC 26 126 1 CAGGTATTCAGAAGAGAACGAAGAGGTGAT 26 147 1 TTTTTCGAAAGGAAAGGAGGTGTTGAT 30 90 1 CCCTTAACTTGAAAAGAACAAAGGAGGAAA 34 40 1 TTGAAAAAAAGAAAAAGAAAAGATTAACCA 35 60 0 AAACAGTTTCGAAGAGAACGAAGAGGGAAA 37 89 1 TGGAGACTCTGAAGAGGAGGTGGAAGT 45 61 1 ********** MAP Score: 4.24344 Motif 12 GGCCCCACTTCGGGGCCGGGTTCCACAAAAACAGAG 0 19 1 TTTCAAACAGGGGGCCGGGGGGACAACCCCCGGTCC 8 23 1 TTCCTTTGGACGGGATGGTATAATCACCACAGGATT 16 23 1 TTTAATCAGGGGGTCGTGGGTTCGAATCCCACCCGG 18 26 1 CAAGATAGAGCAGGCGGGTGTAGCTCAGTGGTAGAG 18 159 1 TGCCAAGCTGGGGGTCGCGGGTTCGAATCCCGTCGC 18 203 1 ACGGGTTCGACGGGGATGGAGTCCCCTGGGAAGCGA 19 144 0 TCTATCGGGAGGGGATCTTCCCCTCCCCTTC 23 5 1 CGCCCCTTCCCGGGGCGGCTTTCGGAGGTGCCGTG 31 18 1 ATGGAACTTTCGGGGAGGGGTTCCCCCTCCCTTAAC 34 12 1 AAAACTTTTACGGGGCTGGGTCCCCAGCCCCTTCCA 36 13 1 GTAACTTTCACGGTAACGTTTACGTATGGTAATATC 37 250 1 CCCCGCCCCTCGGGGCGGGGTTTTAAAAAAAGAAGG 38 18 1 TACCCGGGGTGGGGATCCCCACCCCTTTTC 42 4 1 CACACCCCGGCGGGCCCGCAGTGGGCCCGTTTTTTT 46 21 1 **** ***** * MAP Score: 3.04347