AlignACE 3.0 10/20/99 AlignACE2 -i TP/TP_operons002_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944238592 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TP0026 225 flagellar motor switch protein (fliG-1) #1 TP0254 236 transcription termination factor Rho (rho) #2 TP0272 132 SpoOJ regulator (soj) #3 TP0382 83 T. pallidum predicted coding region TP0382 #4 TP0383 27 conserved hypothetical protein #5 TP0390 45 cell division protein (ftsZ) #6 TP0394 32 DNA topoisomerase I (topA) #7 TP0396 147 flagellar basal-body rod protein (flgB) #8 TP0397 84 flagellar basal-body rod protein (flgC) #9 TP0399 116 flagellar basal-body M ring protein (fliF) #10 TP0401 47 flagellar assembly protein (fliH) #11 TP0402 27 flagellum-specific ATP synthase (fliI) #12 TP0417 26 apolipoprotein N-acyltransferase (cutE) #13 TP0426 141 V-type ATPase, subunit A (atpA-1) #14 TP0527 94 V-type ATPase, subunit D (atpD-2) #15 TP0531 300 V-type ATPase, subunit F, putative #16 TP0535 140 T. pallidum predicted coding region TP0535 #17 TP0547 143 penicillin tolerance protein (lytB) #18 TP0576 300 peptide chain release factor 2 (prfB) #19 TP0713 34 flagellar-associated GTP-binding protein (flhF) #20 TP0721 21 flagellar motor switch protein (fliM) #21 TP0726 57 flagellar protein (flbD) #22 TP0727 70 flagellar hook protein (flgE) #23 TP0728 75 flagellar hook assembly scaffolding protein (flgD) #24 TP0773 300 periplasmic serine protease DO (htrA-1) #25 TP0841 300 periplasmic serine protease DO (htrA-2) #26 TP0853 54 ATP-binding protein (ylxH-2) #27 TP0855 155 T. pallidum predicted coding region TP0855 #28 TP0907 62 conserved hypothetical protein #29 TP0911 21 conserved hypothetical protein #30 TP0960 75 flagellar basal-body rod protein (flgG-1) #31 TP0961 85 flagellar basal-body rod protein (flgG-2) #32 TP0962 110 conserved hypothetical integral membrane protein Motif 1 TCTCGTCGGGGGGGGGGGGGTGGACGT 3 4 0 GGTCATGCAAGGGCGCGGCGTGGTGGTGAGTTC 17 58 0 CGATACCAGGGGGAGCGGAGGGGCGT 31 69 1 GGGCTCGCTTGCGTTGGGGGAGGCCTTGCAGTA 15 138 1 AGGTTTCTGTAGGAGGGGAGAGGCGCGCGCGTA 32 61 1 CGCTCAATCAGGGGGCTGCGGGGGAGCGCTTGC 27 41 0 CAGGGTTGTAGCGTGCACGGTGCTGCGTGCTGT 1 179 1 CGGCCTGCGAGCGTTGAGTGTGCCTTCTTCACG 18 30 1 GCGGTGTAGGGGAATGGGAGGGGA 5 31 1 TCGTTCTATAGTGAGGGGAGGGGACACGC 9 97 1 GTTTCGGTAAGCATAGGGGGCGGAAAAC 6 14 1 TAGAGAAAGAGGCGTGGGTGTGCGTGT 11 10 1 AAGTGTGCGCGGTGTGCTGATAGTACA 25 4 1 GTGAAAAAAGAGGAGGGCCGGGGC 23 61 1 CCCCCCCCCAGCGGGGAGGGGTCCAAGGATGTA 0 111 0 GCTGCCCGCGGCGCTGCGCGTGGCGCCGTGGGC 24 196 1 TGTCTTGGCCACGCAGGGAGAGGATACAGAG 14 73 1 GCAGGTTATTGCATGGTGTGTGGGTTGTGACAA 26 22 1 CGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTAT 28 29 1 CGTTTCCGCTGCGTTCGGTGTGTTGGTAGTGCT 0 14 0 GCGATGTGTGTGCGCGTGCCTGT 32 0 1 CAAGCGTAATACCTGCGGTGCGCAGATGTTCTT 18 173 0 GCGCAGCGCCGCGGGCAGCGTGTATTGGAATTG 24 182 0 ATAGCGTGTAGCGGAGTGAGAGGGAGGTGTGA 30 53 1 ACCGCGTGCCGCATGCTGTGCGCGGT 5 3 0 GGGGAGAGGCGCGCGCGTAGAGCGCACGGCTCT 32 75 1 AGCGATGGGGGCAATGAGTGAGGATCCTGAAAT 15 188 1 CATTGCCGCAGGACTCGCGGTGGGGCTCGCTTG 15 116 1 AAGAAAACTGGCGCGCCGAGTGTACCAAAGGCA 17 95 0 GGTGAAAAGAGGGTGGGACGCGCTTAGTGCGCA 9 59 1 GTTCATTGTAGTGGAGGGTGTGCTCTTGACACA 0 168 0 TCTTCTGGCGGGGCTCGGCCTGCGAGCGTTGAG 18 15 1 CGCCTTCTCCACGAGGACAGCGGCCGCATCCTC 16 100 0 GGTTTACAAGGCCGGGCTGTTCTGCAAAAAGA 9 9 1 AGTGTACGTGGCGGGCACAGGTGAAGAGGGGAT 25 73 1 GCACGGCTGCACGTGCACAGTGCTCTGCATCAG 18 104 0 GGGGATCGAGGGGGTGAGGGTTCTTCCTCGTCT 18 210 0 TGCCTTCACCGGCGTGGGAGTTCAAGTC 24 5 0 TGCTGATAGTACATGCAGGGAGCAGTTTGTGCA 25 24 1 AGAAAGAGGACTCCGCGCGGTCTCCGGACA 0 205 0 CAAGACACACAGCAAGGGAGCGCCGCAAAGAAA 14 47 0 GTAAAATCGGGGCTGCAGCGATGGGGGCAATGA 15 172 1 CCTGGTAAGGAGATACGGTGTGCAAAAGCTAGA 2 25 0 GGTCCGCCTAGCGGAGGTGGAGGATGCGGCCGC 16 81 1 CGACGGGTATGAGCGCGCAGCGCTTGGCGGGCC 8 58 1 TGTGTTTGCTGGCTTGTGCGTGCTTCTTAACGC 15 41 1 GGGAGCGCTTGCGCGGACGCCGCAGATACCATA 27 20 0 ATGAGTGTGCGGACTGACTGCGCATCTGAAAGC 18 138 0 GGCACAAGATGGGTGGAGGGTTTGATAG 19 16 1 AAACGATGCGGGGAAGCGAGCTGCAGAGAATGT 7 30 1 CTACCCTGTAGGGGGGTCAGCGTACACAACCGG 23 29 1 CCCTTTTAAGGCGTGGGTCGATGGTTCGAATCC 24 254 1 GTTTTTTTACAGCAGCGGCGTTGCTCGTTTTTA 25 245 1 GCTTCTTAACGCGGAGAGTCAGCCGCCCTCTCA 15 62 1 GTAGGGGTTTGGGTACGCGCAGGGACGTGGAGG 25 155 1 GGGGTAGGAACGGAGCGTCCAAACGATG 7 5 1 CTTAAGCGGCAGGTGGCGTGATGGGGATGAGGG 21 34 1 ACAGCATGCGGCACGCGGTGTAGGGGAATGGGA 5 17 1 GGCACGGGATGCAAAGGCGGCGTACTTGACAAA 24 145 1 TGGTGTATACAGGAACTGTGCGCCTCTTTTAGG 1 39 0 GGGGTCCAAAGCATACGCAGCTCTTTATTATAC 13 100 1 CGCGGTCTCCGGACACGCAGTTCATTGTAGTGG 0 187 0 CACGCGGCCGACACTCAGCGAGCACATCGACCT 16 21 0 GCTGCTTTTAACCCGGGCTGTGTCGGTAGGGGT 25 130 1 ATAGGCGCGCCGGTTTTGCCTACCC 23 2 1 *** **** * ** MAP Score: 81.0553 Motif 2 CCCCCCCCCAGCGGGGAGGGGTCCAAGGATGTA 0 111 0 GCCACGCGCAGCGCCGCGGGCAGCGTGTATTGG 24 187 0 CTTGTTGCAGGCGGTGTGTGGTGGGTTATGGAT 28 33 1 TTCTCGTCGGGGGGGGGGGGGTGGACGT 3 5 0 GGGGATCGAGGGGGTGAGGGTTCTTCCTCGTCT 18 210 0 AAGTGTGCGCGGTGTGCTGATAGTACATG 25 6 1 CGCAGGACTCGCGGTGGGGCTCGCTTGCGTTGG 15 122 1 TCATGCAAGGGCGCGGCGTGGTGGTGAGTTCTT 17 56 0 GAAAACTGGCGCGCCGAGTGTACCAAAGGCACC 17 93 0 GGCCCGCCAAGCGCTGCGCGCTCATACCCGTCG 8 58 0 GTTCTATAGTGAGGGGAGGGGACACGC 9 99 1 TTCTGTAGGAGGGGAGAGGCGCGCGCGTAGAGC 32 65 1 CGGCCTGCGAGCGTTGAGTGTGCCTTCTTCACG 18 30 1 TCCGGAGACCGCGCGGAGTCCTCTTTCT 0 207 1 GGTCGACAATGGGTCGGGGGTAGTCGG 7 130 1 AGAGGCGCGCGCGTAGAGCGCACGGCTCTGCAA 32 79 1 GGGCTCGCTTGCGTTGGGGGAGGCCTTGCAGTA 15 138 1 ATACCAGGGGGAGCGGAGGGGCGT 31 71 1 CTGAGTGTCGGCCGCGTGGGTTGGTAATATGGA 16 36 1 GTTATTGCATGGTGTGTGGGTTGTGACAAGGAG 26 26 1 GCTTCTTAACGCGGAGAGTCAGCCGCCCTCTCA 15 62 1 CAATCAGGGGGCTGCGGGGGAGCGCTTGCGCGG 27 37 0 TATGGATAAAGGGGTGATGGTCCGCCTAGCGGA 16 63 1 GGTCCGCCTAGCGGAGGTGGAGGATGCGGCCGC 16 81 1 CTTTCTTCTGGCGGGGCTCGGCCTGCGAGCGTT 18 12 1 TTTTACAGCAGCGGCGTTGCTCGTTTTTATCTG 25 249 1 TATGGTATCTGCGGCGTCCGCGCAAGCGCTCCC 27 20 1 CCTCCCCGCTGGGGGGGGGCACCTTTTAAGGTG 0 125 1 GTTTCGGTAAGCATAGGGGGCGGAAAAC 6 14 1 AGCCAATTTAGGTGAGAGTGTTCTTGGGCGTGT 1 120 1 TCATTGTAGTGGAGGGTGTGCTCTTGACACAAG 0 166 0 GCGGCGCTGCGCGTGGCGCCGTGGGCTATTAGC 24 203 1 GCGCTCCCTTGCTGTGTGTCTTGGCCACGCAGG 14 57 1 AATCGGGGCTGCAGCGATGGGGGCAATGAGTGA 15 176 1 TTTAACCCGGGCTGTGTCGGTAGGGGTTTGGGT 25 136 1 GCGATGTGTGTGCGCGTGCCTGT 32 0 1 ATGCTCTGTGTCCTCCTCATGTGAC 22 55 0 ATATAGACGAGCATAGCGTGTAGCGGAGTGAGA 30 41 1 GGTGAAAAAAGAGGAGGGCCGGGGC 23 60 1 TAGAGAAAGAGGCGTGGGTGTGCGTGT 11 10 1 GATGTTCTTCGATGAGTGTGCGGACTGACTGCG 18 149 0 TTTAAGGCGTGGGTCGATGGTTCGAATCCATCA 24 258 1 TGTATCTTAAGCGGCAGGTGGCGTGATGGGGAT 21 29 1 GTTTCACAATGCAGGCGGGGTCCAAAGCATACG 13 84 1 ACCCTGTAGGGGGGTCAGCGTACACAACCGGTG 23 31 1 TGGGCTATTAGCTCAGCTGGTAGAGCAACGCCC 24 224 1 AGCGTGCACGGTGCTGCGTGCTGTTCAAACCGG 1 188 1 TTCTCCACGAGGACAGCGGCCGCATCCTCCACC 16 96 0 CGCTGCGTTCGGTGTGTTGGTAGTGCTGCTG 0 8 0 CGCACAGCATGCGGCACGCGGTGTAGGGGAATG 5 14 1 **** * **** * MAP Score: 76.0112 Motif 3 GGTGGCGGTAGTGTGCGTCTG 29 3 0 AGTCAGGTTTCTGTAGGAGGGGAGAGGCGCGCGCGTA 32 57 1 CAGCGTGTAAGTGTACGTGGCGGGCACAGGTGAAGAG 25 64 1 GGGGAGAGGCGCGCGCGTAGAGCGCACGGCTCTGCAA 32 75 1 GGACCCCTCCCCGCTGGGGGGGGGCACCTTTTAAGGT 0 120 1 AAGTGTGCGCGGTGTGCTGATAGTACATG 25 2 1 TCTCGTCGGGGGGGGGGGGGTGGACGT 3 0 0 CTCAATCAGGGGGCTGCGGGGGAGCGCTTGCGCGGAC 27 35 0 TACATGCAGGGAGCAGTTTGTGCACGGTAGGCAGCGT 25 33 1 GGCTCGGCCTGCGAGCGTTGAGTGTGCCTTCTTCACG 18 26 1 TCGTTCTATAGTGAGGGGAGGGGACACGC 9 97 1 CAATATTGCCGCGACGGGTATGAGCGCGCAGCGCTTG 8 47 1 ACAAAGTATTGAGCTGACAGAGCACGGTTAAGATATT 27 107 0 TAGAGAAAGAGGCGTGGGTGTGCGTGT 11 8 1 GCGATGTGTGTGCGCGTGCCTGTCCTG 32 0 1 ATAGCGTGTAGCGGAGTGAGAGGGAGGTGTGA 30 53 1 GGTCCGCCTAGCGGAGGTGGAGGATGCGGCCGCTGTC 16 81 1 ATTGTGAAACGCGACCGATGCGTAAGCAACATCAGCT 13 57 0 TGTGTGTCTTGGCCACGCAGGGAGAGGATACAGAG 14 69 1 TGCTCGCTGAGTGTCGGCCGCGTGGGTTGGTAATATG 16 30 1 AAGTGTGAGACTGTAGGGGACGAGCGCTCAATCAGGG 27 61 0 AATGAACTGCGTGTCCGGAGACCGCGCGGAGTCCTCT 0 194 1 GTGCTCTTGACACAAGGGCGTGAGCACCTTAAAAGGT 0 145 0 CTGCAGCGATGGGGGCAATGAGTGAGGATCCTGAAAT 15 184 1 AGGCACCCAGGTCATGCAAGGGCGCGGCGTGGTGGTG 17 63 0 ACACCGCGTGCCGCATGCTGTGCGCGGT 5 1 0 TGCCGCAGGACTCGCGGTGGGGCTCGCTTGCGTTGGG 15 119 1 CGGCGCCACGCGCAGCGCCGCGGGCAGCGTGTATTGG 24 187 0 GTATCTTAAGCGGCAGGTGGCGTGATGGGGATGAGGG 21 30 1 GGAGAAGGCGCAGGAGCAGGCGCACGG 16 123 1 CTACCCTGTAGGGGGGTCAGCGTACACAACCGGTGAA 23 29 1 TGCGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTATGG 28 27 1 CATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 5 21 1 GGGGTAGGAACGGAGCGTCCAAACGATG 7 1 1 TTCGATGAGTGTGCGGACTGACTGCGCATCTGAAAGC 18 138 0 GGTACGGGAGTAGGTCGATGTGCTCGCTGAGTGTCGG 16 10 1 GGTGAAAAGAGGGTGGGACGCGCTTAGTGCGCATTGG 9 59 1 GTTCATTGTAGTGGAGGGTGTGCTCTTGACACAAGGG 0 164 0 TGTTCTTTCCGTTTCCGCTGCGTTCGGTGTGTTGGTA 0 19 0 GGTCGACAATGGGTCGGGGGTAGTCGG 7 130 1 TATGAGCGCGCAGCGCTTGGCGGGCCGAT 8 65 1 CTCTTTCTTCTGGCGGGGCTCGGCCTGCGAGCG 18 6 1 TCTATCTCCCGATACCAGGGGGAGCGGAGGGGCGT 31 60 1 TTTGGGTACGCGCAGGGACGTGGAGGGACTCATGAAC 25 162 1 GTATGGGTTGGAAAAGAGCATGGTTTACGGG 15 4 1 AACCCGGGCTGTGTCGGTAGGGGTTTGGGTACGCGCA 25 139 1 CCTGCGCCTTCTCCACGAGGACAGCGGCCGCATCCTC 16 100 0 GTCTCTGATGCAGAGCACTGTGCACGTGCAGCCGTGC 18 100 1 CTCCGCTATGGGGATCGAGGGGGTGAGGGTTCTTCCT 18 215 0 GCTATTAGCTCAGCTGGTAGAGCAACGCCCTTTTAAG 24 227 1 GTCCAAACGATGCGGGGAAGCGAGCTGCAGAGAATGT 7 26 1 GACAGTTTCGGTAAGCATAGGGGGCGGAAAAC 6 10 1 TTGAACAGCACGCAGCACCGTGCACGCTACAACCCTG 1 179 0 AACTCGTAACCATATCGCTGTGTGCTGCTTTTAACCC 25 107 1 CCTCGTTTGTGTGTGGGGTACATGCGGTATGCCGCAG 25 209 1 TGAAATGCGTGATAAGAACGTGTGCAGCGTCTCGATG 18 63 0 * * ** * * **** MAP Score: 68.0367 Motif 4 ATACATCCTTGGACCCCTCCCCGCTGGGGGGGG 0 110 1 CTTGTGTCAAGAGCACACCCTCCACTACAATGA 0 166 1 TGAACTGCGTGTCCGGAGACCGCGCGGAGTCCT 0 196 1 ACACGCCCAAGAACACTCTCACCTAAATTGGCT 1 120 0 ACAGCACGCAGCACCGTGCACGCTACAACCCTG 1 179 0 ACGTCCACCCCCCCCCCCCCGACGA 3 2 1 CGCGTGCCGCATGCTGTGCGCGGT 5 1 0 CATTCCCCTACACCGCGTGCCGCATGCTGTGCG 5 14 0 GTTTTCCGCCCCCTATGCTTACCGAAAC 6 14 0 CGCATCGTTTGGACGCTCCGTTCCTACCCC 7 7 0 TCTCAGAAAAAAGCACTTCGCACTGGTGTACAT 7 59 0 CCGACTACCCCCGACCCATTGTCGACC 7 130 0 ACCACTAAACAAACCCATCACGCTTCTCCATAC 8 12 0 CTGCGCGCTCATACCCGTCGCGGCAATATTGAT 8 45 0 GGCCCGCCAAGCGCTGCGCGCTCATACCCGTCG 8 58 0 TTTTGCAGAACAGCCCGGCCTTGTAAACC 9 6 0 AATGCGCACTAAGCGCGTCCCACCCTCTTTTCA 9 61 0 GCGTGTCCCCTCCCCTCACTATAGAAC 9 99 0 ACACGCACACCCACGCCTCTTTCTCTA 11 8 0 GCAACATCAGCTGCAGCCCGTACAAAAACACTG 13 36 0 CGTATGCTTTGGACCCCGCCTGCATTGTGAAAC 13 84 0 GTATAATAAAGAGCTGCGTATGCTTTGGACCCC 13 100 0 GATTTCTTTGCGGCGCTCCCTTGCTGTGTGTCT 14 45 1 CTCTGTATCCTCTCCCTGCGTGGCCAAGA 14 75 0 CATGAGAGGGCGGCTGACTCTCCGCGTTAAGAA 15 64 0 AACGCAAGCGAGCCCCACCGCGAGTCCTGCGGC 15 120 0 CCTACTGCAAGGCCTCCCCCAACGCAAGCGAGC 15 140 0 GACACTCAGCGAGCACATCGACCTACTCCCGTA 16 12 0 CATATTACCAACCCACGCGGCCGACACTCAGCG 16 34 0 CGAGGACAGCGGCCGCATCCTCCACCTCCGCTA 16 89 0 GCGCCTGCTCCTGCGCCTTCTCCACGAGGACAG 16 113 0 GAACTCACCACCACGCCGCGCCCTTGCATGACC 17 58 1 GGTGCCTTTGGTACACTCGGCGCGCCAGTTTTC 17 93 1 CAACGCTCGCAGGCCGAGCCCCGCCAGAAGAAA 18 13 0 CGTGAAGAAGGCACACTCAACGCTCGCAGGCCG 18 30 0 ATAAGAACGTGTGCAGCGTCTCGATGCGTGAAG 18 56 0 GCAGAGCACTGTGCACGTGCAGCCGTGCAGCTT 18 109 1 GCTTTCAGATGCGCAGTCAGTCCGCACACTCAT 18 138 1 AGCGTAATACCTGCGGTGCGCAGATGTTCTTCG 18 171 0 CTATCAAACCCTCCACCCATCTTGTGCC 19 16 0 ATCCCCATCACGCCACCTGCCGCTTAAGATACA 21 29 0 ATGCTCTGTGTCCTCCTCATGTG 22 57 0 CCGGTTGTGTACGCTGACCCCCCTACAGGGTAG 23 29 0 GCCCCGGCCCTCCTCTTTTTTCA 23 62 0 GCAGCTTTCAGGGCACGGGATGCAAAGGCGGCG 24 134 1 GCCAATTCCAATACACGCTGCCCGCGGCGCTGC 24 180 1 CCACGGCGCCACGCGCAGCGCCGCGGGCAGCGT 24 194 0 TGTACTATCAGCACACCGCGCACACTT 25 4 0 ACGTACACTTACACGCTGCCTACCGTGCACAAA 25 49 0 ATCCCCTCTTCACCTGTGCCCGCCACGTACACT 25 73 0 AAACCCCTACCGACACAGCCCGGGTTAAAAGCA 25 132 0 GTCCCTGCGCGTACCCAAACCCCTACCGACACA 25 148 0 TTGTCACAACCCACACACCATGCAATAACCTGC 26 22 0 GGGAGCGCTTGCGCGGACGCCGCAGATACCATA 27 20 0 GCGTCCGCGCAAGCGCTCCCCCGCAGCCCCCTG 27 33 1 CCCCCTGATTGAGCGCTCGTCCCCTACAGTCTC 27 59 1 TATCTTAACCGTGCTCTGTCAGCTCAATACTTT 27 109 1 ATAACCCACCACACACCGCCTGCAACAAGGCCG 28 29 0 CAGACGCACACTACCGCCACC 29 3 1 ACGCCCCTCCGCTCCCCCTGGTATCGGGAGA 31 64 0 TCTACGCGCGCGCCTCTCCCCTCCTACAGAAAC 32 63 0 GCAGAGCCGTGCGCTCTACGCGCGCGCCTCTCC 32 77 0 * ** * ****** MAP Score: 22.4765 Motif 5 CGCTGCGTTCGGTGTGTTGGTAGTGCTGCTG 0 6 0 GTGCCCCCCCCCAGCGGGGAGGGGTCCAAGGATGT 0 112 0 TCTTGACACAAGGGCGTGAGCACCTTAAAAGGTGC 0 143 0 TCATTGTAGTGGAGGGTGTGCTCTTGACACAAGGG 0 164 0 ACTACAATGAACTGCGTGTCCGGAGACCGCGCGGA 0 189 1 GTGTCCGGAGACCGCGCGGAGTCCTCTTTCT 0 204 1 TTCCAGGGTTGTAGCGTGCACGGTGCTGCGTGCTG 1 176 1 TCGTCGGGGGGGGGGGGGTGGACGT 3 0 0 CGCACAGCATGCGGCACGCGGTGTAGGGGAATGGG 5 14 1 GGGGTAGGAACGGAGCGTCCAAACG 7 0 1 AGAATGTACACCAGTGCGAAGTGCTTTTTTCTGAG 7 56 1 TCGACAATGGGTCGGGGGTAGTCGG 7 132 1 GTATGAGCGCGCAGCGCTTGGCGGGCCGAT 8 64 1 TGAAAAGAGGGTGGGACGCGCTTAGTGCGCATTGG 9 61 1 GGCTCGTTCTATAGTGAGGGGAGGGGACACGC 9 94 1 TAGAGAAAGAGGCGTGGGTGTGCGTGT 11 10 1 TCTTGGCCACGCAGGGAGAGGATACAGAG 14 75 1 ATGGTTTACGGGTGTGTTTGCTGGCTTGTGCGTGC 15 29 1 AGCGAGCCCCACCGCGAGTCCTGCGGCAATGTATT 15 112 0 GCTCGCTTGCGTTGGGGGAGGCCTTGCAGTAGGTA 15 140 1 TGCAGCGATGGGGGCAATGAGTGAGGATCCTGAAA 15 185 1 CGATGTGCTCGCTGAGTGTCGGCCGCGTGGGTTGG 16 25 1 TGGTCCGCCTAGCGGAGGTGGAGGATGCGGCCGCT 16 80 1 TCGTGGAGAAGGCGCAGGAGCAGGCGCACGG 16 119 1 TCATGCAAGGGCGCGGCGTGGTGGTGAGTTCTTCT 17 54 0 CGGAAGAAAACTGGCGCGCCGAGTGTACCAAAGGC 17 96 0 CTTTCTTCTGGCGGGGCTCGGCCTGCGAGCGTTGA 18 12 1 GCTCGGCCTGCGAGCGTTGAGTGTGCCTTCTTCAC 18 27 1 AAGCTGCACGGCTGCACGTGCACAGTGCTCTGCAT 18 107 0 TTCTTCGATGAGTGTGCGGACTGACTGCGCATCTG 18 143 0 TTGAGAAAGACGAGGAAGAACCCTCACCCCCTCGA 18 203 1 TGTATCTTAAGCGGCAGGTGGCGTGATGGGGATGA 21 29 1 CGGTGAAAAAAGAGGAGGGCCGGGGC 23 59 1 CACGCGCAGCGCCGCGGGCAGCGTGTATTGGAATT 24 183 0 TGCCCGCGGCGCTGCGCGTGGCGCCGTGGGCTATT 24 198 1 AAGTGTGCGCGGTGTGCTGATAGTAC 25 1 1 GATAGTACATGCAGGGAGCAGTTTGTGCACGGTAG 25 28 1 CAGTTTGTGCACGGTAGGCAGCGTGTAAGTGTACG 25 46 1 GCAGCGTGTAAGTGTACGTGGCGGGCACAGGTGAA 25 63 1 TTTAACCCGGGCTGTGTCGGTAGGGGTTTGGGTAC 25 136 1 GGTAGGGGTTTGGGTACGCGCAGGGACGTGGAGGG 25 154 1 AGGTTATTGCATGGTGTGTGGGTTGTGACAAGGAG 26 24 1 CGGGGGAGCGCTTGCGCGGACGCCGCAGATACCAT 27 21 0 GTGAGACTGTAGGGGACGAGCGCTCAATCAGGGGG 27 59 0 TTGCGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTA 28 26 1 CATAGCGTGTAGCGGAGTGAGAGGGAGGTGTGA 30 52 1 TCTCCCGATACCAGGGGGAGCGGAGGGGCGT 31 64 1 GCGATGTGTGTGCGCGTGCCTGTCCTGTG 32 4 1 GGCGTTGCCATGTGCGTGAAGTCAGGTTTCTGTAG 32 38 1 AAGTCAGGTTTCTGTAGGAGGGGAGAGGCGCGCGC 32 56 1 GGAGGGGAGAGGCGCGCGCGTAGAGCGCACGGCTC 32 72 1 ** *** * ** * * MAP Score: 20.2706 Motif 6 TCCGTTTCCGCTGCGTTCGGTGTGTTGGTAGTGCTGCT 0 11 0 AAGGTGCCCCCCCCCAGCGGGGAGGGGTCCAAGGATGT 0 112 0 GTTCATTGTAGTGGAGGGTGTGCTCTTGACACAAGGGC 0 163 0 AACTGCGTGTCCGGAGACCGCGCGGAGTCCTCTTTCT 0 198 1 TTGTAGCGTGCACGGTGCTGCGTGCTGTTCAAACCGGT 1 184 1 TTTCTCGTCGGGGGGGGGGGGGTGGACGT 3 1 0 ACACCGCGTGCCGCATGCTGTGCGCGGT 5 0 0 CATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 5 21 1 GGGGTAGGAACGGAGCGTCCAAACGATG 7 0 1 ATTGCCGCGACGGGTATGAGCGCGCAGCGCTTGGCGGG 8 51 1 TCTGCAAAAAGAGTACCGACGGTATATCAGGTGAAAAG 9 30 1 AGGGTGGGACGCGCTTAGTGCGCATTGGCTCGTTCTAT 9 68 1 TAGAGAAAGAGGCGTGGGTGTGCGTGT 11 4 1 GTTTCACAATGCAGGCGGGGTCCAAAGCATACGCAGCT 13 84 1 CTGTGTGTCTTGGCCACGCAGGGAGAGGATACAGAG 14 68 1 GGTGTGTTTGCTGGCTTGTGCGTGCTTCTTAACGCGGA 15 39 1 TACATTGCCGCAGGACTCGCGGTGGGGCTCGCTTGCGT 15 114 1 AGGTAAAATCGGGGCTGCAGCGATGGGGGCAATGAGTG 15 170 1 TCTTGCAGAAGGCATTTGTCTGTGGGGTTTTTTGGTCG 15 248 1 GTAGGTCGATGTGCTCGCTGAGTGTCGGCCGCGTGGGT 16 19 1 TCTTCTGGCGGGGCTCGGCCTGCGAGCGTTGAGTGTGC 18 15 1 CTGATGCAGAGCACTGTGCACGTGCAGCCGTGCAGCTT 18 104 1 TTTCAGATGCGCAGTCAGTCCGCACACTCATCGAAGAA 18 140 1 TCCGCTATGGGGATCGAGGGGGTGAGGGTTCTTCCTCG 18 213 0 TCTTCGGGCACAAGATGGGTGGAGGGTTTGATAG 19 7 1 GACTTGAACTCCCACGCCGGTGAAGGCACTAGCACC 24 8 1 GGGATTAGAGCAGCTTTCAGGGCACGGGATGCAAAGGC 24 125 1 GCGCAGCGCCGCGGGCAGCGTGTATTGGAATTGGCATT 24 177 0 GCTGCCCGCGGCGCTGCGCGTGGCGCCGTGGGCTATTA 24 196 1 TGTGCTGATAGTACATGCAGGGAGCAGTTTGTGCACGG 25 22 1 GGAGCAGTTTGTGCACGGTAGGCAGCGTGTAAGTGTAC 25 42 1 GCGTGTAAGTGTACGTGGCGGGCACAGGTGAAGAGGGG 25 66 1 GGGTTAAAAGCAGCACACAGCGATATGGTTACGAGTTT 25 106 0 TGCTTTTAACCCGGGCTGTGTCGGTAGGGGTTTGGGTA 25 132 1 TATTGTTTACCTCGTTTGTGTGTGGGGTACATGCGGTA 25 200 1 AGATAAAAACGAGCAACGCCGCTGCTGTAAAAAAACTG 25 243 0 GTGCAGGTTATTGCATGGTGTGTGGGTTGTGACAAGGA 26 20 1 GATATGGTATCTGCGGCGTCCGCGCAAGCGCTCCCCCG 27 18 1 CGCTCAATCAGGGGGCTGCGGGGGAGCGCTTGCGCGGA 27 36 0 CGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTATGGATA 28 29 1 GGTGGCGGTAGTGTGCGTCTG 29 0 0 AGATATAGACGAGCATAGCGTGTAGCGGAGTGAGAGGG 30 39 1 TTTTCTATCTCCCGATACCAGGGGGAGCGGAGGGGCGT 31 57 1 GCGATGTGTGTGCGCGTGCCTGTCCTGT 32 0 1 CCTGTCCTGTGGCGTTGCCATGTGCGTGAAGTCAGGTT 32 28 1 TCAGGTTTCTGTAGGAGGGGAGAGGCGCGCGCGTAGAG 32 59 1 GGAGAGGCGCGCGCGTAGAGCGCACGGCTCTGCAAAGA 32 77 1 * ** * *** * ** MAP Score: 5.74848 Motif 7 ATACATCCTTGGACCCCTCCCCGCTGGGGGGGGGCACCTTTT 0 110 1 TGAACTGCGTGTCCGGAGACCGCGCGGAGTCCTCTTTCT 0 196 1 TTCTTTCCAGGGTTGTAGCGTGCACGGTGCTGCGTGCTGTTC 1 172 1 TCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 3 1 0 ACCGCGCACAGCATGCGGCACGCGGTGTAGGGGAATG 5 5 1 GACAGTTTCGGTAAGCATAGGGGGCGGAAAAC 6 10 1 TAGGAACGGAGCGTCCAAACGATGCGGGGAAGCGAGCTGCAG 7 14 1 CTTTTTTTTGGTCGACAATGGGTCGGGGGTAGTCGG 7 121 1 ATATTGCCGCGACGGGTATGAGCGCGCAGCGCTTGGCGGGCC 8 49 1 GGTTTACAAGGCCGGGCTGTTCTGCAAAAAGA 9 0 1 GACGGTATATCAGGTGAAAAGAGGGTGGGACGCGCTTAGTGC 9 47 1 CGCATTGGCTCGTTCTATAGTGAGGGGAGGGGACACGC 9 88 1 CAGAGGCAGTGTTTTTGTACGGGCTGCAGCTGATGTTGCTTA 13 30 1 CTCTGTATCCTCTCCCTGCGTGGCCAAGACACACAGCAAG 14 64 0 TTTAAGCCGCCATCTACATGAGAGGGCGGCTGACTCTCCGCG 15 71 0 AATACATTGCCGCAGGACTCGCGGTGGGGCTCGCTTGCGTTG 15 112 1 GGTGGGGCTCGCTTGCGTTGGGGGAGGCCTTGCAGTAGGTAA 15 134 1 CCTTGCAGTAGGTAAAATCGGGGCTGCAGCGATGGGGGCAAT 15 161 1 CGATGTGCTCGCTGAGTGTCGGCCGCGTGGGTTGGTAATATG 16 25 1 TATGGATAAAGGGGTGATGGTCCGCCTAGCGGAGGTGGAGGA 16 63 1 CCTAGCGGAGGTGGAGGATGCGGCCGCTGTCCTCGTGGAGAA 16 87 1 CCGCTGTCCTCGTGGAGAAGGCGCAGGAGCAGGCGCACGG 16 110 1 CCCAGGTCATGCAAGGGCGCGGCGTGGTGGTGAGTTCTTCTT 17 53 0 GAAGGCACACTCAACGCTCGCAGGCCGAGCCCCGCCAGAAGA 18 15 0 CTCTGATGCAGAGCACTGTGCACGTGCAGCCGTGCAGCTTTC 18 102 1 CCTCCTCCGCTATGGGGATCGAGGGGGTGAGGGTTCTTCCTC 18 214 0 TCTTCGGGCACAAGATGGGTGGAGGGTTTGATAG 19 5 1 GTGTGAAAATGTATCTTAAGCGGCAGGTGGCGTGATGGGGAT 21 20 1 CACAACCGGTGAAAAAAGAGGAGGGCCGGGGC 23 53 1 AGGGATTAGAGCAGCTTTCAGGGCACGGGATGCAAAGGCGGC 24 124 1 ATGCCAATTCCAATACACGCTGCCCGCGGCGCTGCGCGTGGC 24 178 1 GCCTTAAAAGGGCGTTGCTCTACCAGCTGAGCTAATAGCCCA 24 224 0 CAGCGTGTAAGTGTACGTGGCGGGCACAGGTGAAGAGGGGAT 25 64 1 GCTGTGTGCTGCTTTTAACCCGGGCTGTGTCGGTAGGGGTTT 25 123 1 TGTGTCGGTAGGGGTTTGGGTACGCGCAGGGACGTGGAGGGA 25 148 1 ACGCGCAGAACTTGGATGACCAGAGCAGCAGATAAA 25 274 0 GCAGGTTATTGCATGGTGTGTGGGTTGTGACAAGGAGACGCA 26 22 1 CGCTCAATCAGGGGGCTGCGGGGGAGCGCTTGCGCGGACGCC 27 32 0 TCCGTCTTGCGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTAT 28 20 1 CCTTTTCTATCTCCCGATACCAGGGGGAGCGGAGGGGCGT 31 55 1 GTTTCTGTAGGAGGGGAGAGGCGCGCGCGTAGAGCGCACGGC 32 63 1 * ***** ** * * MAP Score: 3.9344 Motif 8 CAGCAGCACTACCAACACACCGAACGCAGCG 0 10 1 CATCCTTGGACCCCTCCCCGCTGGGGGGGGG 0 113 1 CTTAAAAGGTGCCCCCCCCCAGCGGGGAGGG 0 124 0 CTTTTAAGGTGCTCACGCCCTTGTGTCAAGA 0 147 1 TGCCTAAAAGAGGCGCACAGTTCCTGTATAC 1 37 1 TTGAACAGCACGCAGCACCGTGCACGCTACA 1 185 0 CACCGAGATTACCGACACCGGTTTGAACAGC 1 207 0 ACGTCCACCCCCCCCCCCCCGACGA 3 4 1 ACCGCGCACAGCATGCGGCACG 5 1 1 TCCCCTACACCGCGTGCCGCATGCTGTGCGC 5 13 0 TCCCCTCCCATTCCCCTACACC 5 33 0 CTCTGCAGCTCGCTTCCCCGCATCGTTTGGA 7 27 0 CCGACTACCCCCGACCCATTGTCGACCA 7 129 0 ACTAAACAAACCCATCACGCTTCTCCATACG 8 11 0 CGCGCTCATACCCGTCGCGGCAATATTGATA 8 44 0 CGACGGGTATGAGCGCGCAGCGCTTGGCGGG 8 58 1 GGTTTACAAGGCCGGGCTGTTCTGCAAAAA 9 9 1 GCGCACTAAGCGCGTCCCACCCTCTTTTCAC 9 60 0 GCGTGTCCCCTCCCCTCACTATAGAAC 9 99 0 ACACGCACACCCACGCCTCTTTCTCTA 11 8 0 ATGCTTTGGACCCCGCCTGCATTGTGAAACG 13 83 0 TGATTTCTTTGCGGCGCTCCCTTGCTGTGTG 14 44 1 TGTATCCTCTCCCTGCGTGGCCAAGACACAC 14 70 0 GGAGAGTCAGCCGCCCTCTCATGTAGATGGC 15 74 1 AACGCAAGCGAGCCCCACCGCGAGTCCTGCG 15 122 0 CCTACTGCAAGGCCTCCCCCAACGCAAGCGA 15 142 0 CATATTACCAACCCACGCGGCCGACACTCAG 16 36 0 CGCTAGGCGGACCATCACCCCTTTATCCATA 16 63 0 AAGAACTCACCACCACGCCGCGCCCTTGCAT 17 56 1 CTTTGGTACACTCGGCGCGCCAGTTTTCTTC 17 98 1 GCTCGCAGGCCGAGCCCCGCCAGAAGAAAGA 18 11 0 TGCGTGAAGAAGGCACACTCAACGCTCGCAG 18 34 0 CGCAGTCAGTCCGCACACTCATCGAAGAACA 18 149 1 CGAAGAACATCTGCGCACCGCAGGTATTACG 18 171 1 ACGAGGAAGAACCCTCACCCCCTCGATCCCC 18 212 1 CTATCAAACCCTCCACCCATCTTGTGCCC 19 15 0 CCCTCATCCCCATCACGCCACCTGCCGCT 21 38 0 ATAGGCGCGCCGGTTTTGCCTAC 23 2 1 CCGGTTGTGTACGCTGACCCCCCTACAGGGT 23 31 0 GCCCCGGCCCTCCTCTTTTTTCA 23 62 0 GCATTTTGTCAAGTACGCCGCCTTTGCATCC 24 151 0 ACGCGCAGCGCCGCGGGCAGCGTGTATTGGA 24 186 0 GCCCACGGCGCCACGCGCAGCGCCGCGGGCA 24 198 0 CGAACCATCGACCCACGCCTTAAAAGGGCGT 24 251 0 TATCAGCACACCGCGCACACTT 25 1 0 CGTGCACAAACTGCTCCCTGCATGTACTATC 25 28 0 AGTGTACGTGGCGGGCACAGGTGAAGAGGGG 25 73 1 GGGTTAAAAGCAGCACACAGCGATATGGTTA 25 113 0 ACCGCATGTACCCCACACACAAACGAGGTAA 25 206 0 AAAAAAACTGCGGCATACCGCATGTACCCCA 25 222 0 CCTTGTCACAACCCACACACCATGCAATAAC 26 26 0 GAGCGCTTGCGCGGACGCCGCAGATACCATA 27 20 0 GTCCGCGCAAGCGCTCCCCCGCAGCCCCCTG 27 35 1 CCCTGATTGAGCGCTCGTCCCCTACAGTCTC 27 61 1 CCATAACCCACCACACACCGCCTGCAACAAG 28 33 0 TCACACCTCCCTCTCACTCCGCTACACGCT 30 55 0 ACGCCCCTCCGCTCCCCCTGGTATCGGGA 31 66 0 GGACAGGCACGCGCACACACATCGC 32 4 0 TGCGCTCTACGCGCGCGCCTCTCCCCTCCTA 32 70 0 CGCGCGCGTAGAGCGCACGGCTCTGCAAAGA 32 84 1 **** ****** MAP Score: 2.08707