AlignACE 3.0 10/20/99 AlignACE2 -i TP/TP_operons029_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944240019 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TP0074 300 sugar ABC transporter, periplasmic binding protein (y4oP) #1 TP0075 118 sugar ABC transporter, permease protein (y4oQ) #2 TP0076 39 sugar ABC transporter, permease protein (y4oR) #3 TP0077 40 capsular polysaccharide biosynthesis protein (cap5D) #4 TP0278 127 T. pallidum predicted coding region TP0278 #5 TP0279 45 ribosomal protein S1 (rpsA) #6 TP0283 177 lipopolysaccharide core biosynthesis protein (kdtB) #7 TP0284 104 T. pallidum predicted coding region TP0284 #8 TP0562 170 spore coat polysaccharide biosynthesis protein (spsE) Motif 1 CATCTTTTCTGCCCTCTCTTCCCCCAAGAAGAA 1 18 0 GTCCGTTTTTCCCCTCACACCCCAGTCCTGATA 0 274 0 GCGCTCGTCTTCCTCGGAAGACT 4 0 1 CTTATCTAACCCGTACGCAACCC 2 0 0 GATCACCAGCGCACTCCCTTCCCCACATGGACT 4 49 0 TGTCTGACAAGCGCACACTATCTTAGCACCTGC 8 63 1 CTTCCGTTTTCTGCCCTGTACTTCCC 5 3 1 GAGACTGTTTGCGCTCCTCGTCTGTTGTCTGAT 4 79 0 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCA 6 8 1 CTATTTATATTCGCACCCACTCCGTCAACTCCT 6 93 0 TCGAGAAGGAGCGTATCCACCGCGCGCATCGCA 0 162 0 GCACTCCCCCTCTTACGCTACCC 1 105 0 CACGCGTTTGGCGTACAATGCCCC 8 156 1 GCACCCACACGCGTTTGCATTCTGGCACAGGGA 0 11 0 TATCCACCGCGCGCATCGCACCCCATATCGATA 0 149 0 GTGTTCACGCGAGCTCTCTACGCTTCCTAGCTA 6 48 0 CGACGCACGCCCCTACGCAGTCCTACAAAATCT 0 206 0 CATTCTGTTTCCGCTCATATCCAGCATCTTTTC 1 42 0 GCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAG 6 26 1 GCACGGCAACCCCTCACGTTGTTCAGGAACAT 6 155 0 AGATTCTCGTACGCTTTTCTCCCCGTTGTCAAC 0 57 0 CTTCCCTTCTTCGTTTTTCACCCCT 5 30 1 TGAGCACGTACAGTTTGCTCCCCCTTCAACCTA 0 97 0 ACATGGACTGCCGCTTATTTGCCACAGTCTTCC 4 25 0 ****** * *** MAP Score: 30.9919 Motif 2 ATCGATATGGGGTGCGATGCGCGCGGTGGATACGCTCCTT 0 150 1 CACTCTGCGCGGGTGAGTACGTGCAGCAGAT 3 19 1 GCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTG 4 36 1 GTTGCGTACGGGTTAGATAAGAGCAGGAGCAGATAGC 2 12 1 CCGTCGTGTCGGCCCTGCGGGTGCCGAGGATGAACGGC 8 8 0 AAACGAAGAAGGGAAGTACAGGGCAGAAAACGGAAG 5 6 0 CTTCTTCTTGGGGGAAGAGAGGGCAGAAAAGATGCTGGAT 1 17 1 AACAGTCTCAGAACACTCATGGGCGGATGATGGA 4 103 1 CGTTACGTTGGGTAGCGTAAGAGGGGGAGTGC 1 96 1 CGTGAACACCGATTTTCCGCGAGGAGTTGACGGAGTGGGT 6 72 1 CGCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC 6 152 1 TGTATGTCTTTGTTGACAACGGGGAGAAAAGCGTACGAGA 0 46 1 CTGGTGATCAGACAACAGACGAGGAGCGCAAACAGTCTCA 4 73 1 TGATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGACAG 0 269 1 GCAGAAAAGATGCTGGATATGAGCGGAAACAGAATGACGT 1 39 1 AGATTTTGTAGGACTGCGTAGGGGCGTGCGTCGATTGGTG 0 206 1 CAGAATGACGTGTTCTATCTGTGGAGCGCGTTACGTTGGG 1 68 1 TCTGCCCCGTTAGGTTGAAGGGGGAGCAAACTGTACGTGC 0 87 1 AAAATCTTGCGACCTCAGTCGAGAAGGAGCGTATCCACCG 0 173 0 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGT 6 9 1 ** * **** *** MAP Score: 29.9674 Motif 3 AGACATACACCGCACCCACACGCGTTTGCAT 0 24 0 TCGTACGCTTTTCTCCCCGTTGTCAACAAAG 0 53 0 ACGTACAGTTTGCTCCCCCTTCAACCTAACG 0 94 0 GCGGTGGATACGCTCCTTCTCGACTGAGGTC 0 172 1 AATCGACGCACGCCCCTACGCAGTCCTACAA 0 211 0 CCTGTCCGTTTTTCCCCTCACACCCCAGT 0 281 0 AAAGTCTCTTCTTCTTGGGGGAAGAG 1 5 1 GCATCTTTTCTGCCCTCTCTTCCCCCAAGAA 1 21 0 CACGTCATTCTGTTTCCGCTCATATCCAGCA 1 49 0 GCACTCCCCCTCTTACGCTACCCA 1 104 0 GCTATCTGCTCCTGCTCTTATCTAACC 2 22 0 GCTGCACGTACTCACCCGCGCAGAGTGTTTA 3 15 0 TGATCACCAGCGCACTCCCTTCCCCACATGG 4 52 0 AGACTGTTTGCGCTCCTCGTCTGTTGTCTGA 4 80 0 CTGCCCTGTACTTCCCTTCTTCGTTTTTCAC 5 20 1 ACGGCGCGAACGCTTCTCCTC 6 0 0 GAGCTCTCTACGCTTCCTAGCTACACAACGT 6 40 0 TATTTATATTCGCACCCACTCCGTCAACTCC 6 94 0 TGATGATTCTTTTTCTCACTCGGTTGAGTGA 7 29 1 GCCGTTCATCCTCGGCACCCGCA 8 2 1 GTCTGACAAGCGCACACTATCTTAGCACCTG 8 64 1 TGGTGTATAGCTTTCCTGATCGGTAGGCAAT 8 123 0 ******* *** MAP Score: 27.5745 Motif 4 AGAATGCAAACGCGTGTGGGTGCGGTGTATGTCT 0 21 1 TTTCCCGTATCGATATGGGGTGCGATGCGCGCGG 0 142 1 TGGGGTGCGATGCGCGCGGTGGATACGCTCCTTC 0 157 1 TTTGTAGGACTGCGTAGGGGCGTGCGTCGATTGG 0 210 1 GGGCGTGCGTCGATTGGTGTGGTGCTATGTGTCG 0 227 1 TGTGGTGCTATGTGTCGTGCTGGTTTGATGTATC 0 244 1 GTTTGATGTATCAGGACTGGGGTGTGAGGGGAAA 0 266 1 AGTCTCTTCTTCTTGGGGGAAGAGAGGGCAGAAA 1 12 1 TGGAGCGCGTTACGTTGGGTAGCGTAAGAGGGGG 1 89 1 TTGGGTAGCGTAAGAGGGGGAGTGC 1 103 1 GGATAAACACTCTGCGCGGGTGAGTACGTGCAGC 3 12 1 CGCGGGTGAGTACGTGCAGCAGAT 3 26 1 AGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGG 4 43 1 TCAGAACACTCATGGGCGGATGATGGA 4 110 1 GAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGT 6 13 1 GTGCGGTGCGCACGTTGTGTAGCTAGGAAGCGTA 6 29 1 ACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTG 6 79 1 TCCTGAACAACGTGAGGGGTTGCCGTGC 6 159 1 GGTTGAGTGATCTTCGGGGCTGTGCTTTTAAAGT 7 50 1 ATCCTCGGCACCCGCAGGGCCGACACGACGGTAC 8 17 1 GTATAGCTTTCCTGATCGGTAGGCAATCCTTGCC 8 116 0 **** **** * * MAP Score: 24.7297 Motif 5 CAAACGCGTGTGGGTGCGGTGTATGTCTTTGTT 0 27 1 TGTTGACAACGGGGAGAAAAGCGTACGAGAATC 0 56 1 TAGGTTGAAGGGGGAGCAAACTGTACGTGCTCA 0 97 1 GTATCGATATGGGGTGCGATGCGCGCGGTGGAT 0 148 1 AGATTTTGTAGGACTGCGTAGGGGCGTGCGTCG 0 206 1 TGATGTATCAGGACTGGGGTGTGAGGGGAAAAA 0 269 1 CTCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAG 1 15 1 ATGCTGGATATGAGCGGAAACAGAATGACGTGT 1 48 1 TTCTATCTGTGGAGCGCGTTACGTTGGGTAGCG 1 80 1 GCGTTACGTTGGGTAGCGTAAGAGGGGGAGTGC 1 95 1 GGGTTGCGTACGGGTTAGATAAG 2 0 1 TCTGCGCGGGTGAGTACGTGCAGCAGAT 3 22 1 CAGTCCATGTGGGGAAGGGAGTGCGCTGGTGAT 4 48 1 CAACAGACGAGGAGCGCAAACAGTCTCAGAACA 4 85 1 AGAACACTCATGGGCGGATGATGGA 4 112 1 GGGAAGTACAGGGCAGAAAACGGAAG 5 3 0 AGGGGTGAAAAACGAAGAAGGGAA 5 31 0 AGGAGTTGACGGAGTGGGTGCGAATATAAATAG 6 93 1 CTGAACAACGTGAGGGGTTGCCGTGC 6 161 1 TGGTTTGTATGGGTAAGAGGCAGGTGCTAAGAT 8 82 0 ACCACGGCAAGGATTGCCTACCGATCAGGAAAG 8 111 1 **** *** ** * MAP Score: 22.6463 Motif 6 GATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAAATA 6 82 1 CCCTGTGCCAGAATGCAAACGCGTGTGGGTGCGGTGTATGTCT 0 12 1 AGGGATAAACACTCTGCGCGGGTGAGTACGTGCAGC 3 3 1 TGGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGG 4 34 1 ACAAAATCTTGCGACCTCAGTCGAGAAGGAGCGTATCCACCGC 0 172 0 TTCTCACTCGGTTGAGTGATCTTCGGGGCTGTGCTTTTAAAGT 7 41 1 CTGGTTTGATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGA 0 263 1 ACGAGAATCTGCCCCGTTAGGTTGAAGGGGGAGCAAACTGTAC 0 80 1 TTCTATCTGTGGAGCGCGTTACGTTGGGTAGCGTAAGAGGGGG 1 80 1 CGCGCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAGCGTAGAG 6 23 1 GTAGGGGCGTGCGTCGATTGGTGTGGTGCTATGTGTCGTGCTG 0 223 1 CAGTACCGTCGTGTCGGCCCTGCGGGTGCCGAGGATGAACGGC 8 10 0 GCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC 6 153 1 AATCTTTGTTTTCCCGTATCGATATGGGGTGCGATGCGCGCGG 0 133 1 AAAGTCTCTTCTTCTTGGGGGAAGAGAGGGCAGAAA 1 3 1 ATGGGTAAGAGGCAGGTGCTAAGATAGTGTGCGCTTGTCAGAC 8 64 0 TAGGCAATCCTTGCCGTGGTTTGTATGGGTAAGAGGCAGGTGC 8 88 0 GGTCGCAAGATTTTGTAGGACTGCGTAGGGGCGTGCGTCGATT 0 199 1 GTGCGCTGGTGATCAGACAACAGACGAGGAGCGCAAACAGTCT 4 68 1 * ** * * *** * * MAP Score: 19.7616 Motif 7 GTGCCAGAATGCAAACGCGTGTGGGTGCGGTGTATGTCTT 0 16 1 GTATGTCTTTGTTGACAACGGGGAGAAAAGCGTACGAGAA 0 47 1 ATCTGCCCCGTTAGGTTGAAGGGGGAGCAAACTGTACGTG 0 86 1 GTATCGATATGGGGTGCGATGCGCGCGGTGGATACGCTCC 0 148 1 GCAAGATTTTGTAGGACTGCGTAGGGGCGTGCGTCGATTG 0 203 1 TTTGATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGAC 0 267 1 GTCTCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAGATGCT 1 13 1 AGCGCGTTACGTTGGGTAGCGTAAGAGGGGGAGTGC 1 92 1 TGCGTACGGGTTAGATAAGAGCAGGAGCAGATAGC 2 14 1 TAAACACTCTGCGCGGGTGAGTACGTGCAGCAGAT 3 15 1 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAGAC 4 46 1 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTT 6 5 1 GTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACACCGAT 6 45 1 GATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAA 6 82 1 GCCGCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC 6 150 1 ATTGCATGAGCTGAGTATGTGATGATTCTTTTTC 7 4 1 AGTACCGTCGTGTCGGCCCTGCGGGTGCCGAGGATGAACG 8 12 0 * * * * * * * ** * MAP Score: 15.824 Motif 8 CCAGAATGCAAACGCGTGTGGGTGCGGTGTATGTCTT 0 19 1 TGTTGACAACGGGGAGAAAAGCGTACGAGAATCTGCC 0 56 1 GTATCGATATGGGGTGCGATGCGCGCGGTGGATACGC 0 148 1 TTTTGTAGGACTGCGTAGGGGCGTGCGTCGATTGGTG 0 209 1 TTTGATGTATCAGGACTGGGGTGTGAGGGGAAAAACG 0 267 1 GTCTCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAGAT 1 13 1 GATAAACACTCTGCGCGGGTGAGTACGTGCAGCAGAT 3 13 1 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCA 4 46 1 GAGGAGAAGCGTTCGCGCCGTGCGGTG 6 0 1 AAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCT 6 16 1 GTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACACC 6 45 1 ACACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGC 6 77 1 GTTCCTGAACAACGTGAGGGGTTGCCGTGC 6 157 1 * ** * ** * * ** MAP Score: 14.7407 Motif 9 GCCAGAATGCAAACGCGTGTGGGTGCGGTGTATGTCTTTGTTG 0 18 1 CCCGTATCGATATGGGGTGCGATGCGCGCGGTGGATACGCTCC 0 145 1 GTAGGACTGCGTAGGGGCGTGCGTCGATTGGTGTGGTGCTATG 0 213 1 ATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGACAGG 0 271 1 AGCGCGTTACGTTGGGTAGCGTAAGAGGGGGAGTGC 1 92 1 TAAACACTCTGCGCGGGTGAGTACGTGCAGCAGAT 3 15 1 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAGACAAC 4 46 1 GCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAGCG 6 18 1 CCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAAA 6 80 1 TATTTTTGCAGTACCGTCGTGTCGGCCCTGCGGGTGCCGAGGA 8 18 0 * **** * * * * * MAP Score: 10.2045 Motif 10 GCAAACGCGTGTGGGTGCGGTGTATGTCTT 0 26 1 TTAGGTTGAAGGGGGAGCAAACTGTACGTG 0 96 1 CGTATCGATATGGGGTGCGATGCGCGCGGT 0 147 1 AGGACTGCGTAGGGGCGTGCGTCGATTGGT 0 215 1 GTATCAGGACTGGGGTGTGAGGGGAAAAAC 0 273 1 GTGTTCTATCTGTGGAGCGCGTTACGTTGG 1 77 1 TAGCGTAAGAGGGGGAGTGC 1 108 1 AACACTCTGCGCGGGTGAGTACGTGCAGCA 3 17 1 CTTCCGAGGAAGACGAGCGC 4 0 0 TGGCAAATAAGCGGCAGTCCATGTGGGGAA 4 34 1 ATGTGGGGAAGGGAGTGCGCTGGTGATCAG 4 54 1 AGACAACAGACGAGGAGCGCAAACAGTCTC 4 82 1 GTTCGCGCCGTGCGGTGCGCACGTTGTGTA 6 20 1 AGTTGACGGAGTGGGTGCGAATATAAATAG 6 96 1 AGTGATCTTCGGGGCTGTGCTTTTAAAGTT 7 55 1 CCGTCGTGTCGGCCCTGCGGGTGCCGAGGA 8 18 0 TGGGTAAGAGGCAGGTGCTAAGATAGTGTG 8 76 0 ********** MAP Score: 9.41275 Motif 11 ACGCGTTTGCATTCTGGCACAGGGAA 0 3 0 GCAAACGCGTGTGGGTGCGGTGTATGTCTTTGT 0 26 1 ATGGGGTGCGATGCGCGCGGTGGATACGCTCCT 0 156 1 TGTAGGACTGCGTAGGGGCGTGCGTCGATTGGT 0 212 1 GCGTGCGTCGATTGGTGTGGTGCTATGTGTCGT 0 229 1 TCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAGA 1 16 1 GACGTGTTCTATCTGTGGAGCGCGTTACGTTGG 1 74 1 GGGTAGCGTAAGAGGGGGAGTGC 1 105 1 TACGGGTTAGATAAGAGCAGGAGCAGATAGC 2 18 1 GCACGTACTCACCCGCGCAGAGTGTTTATCCCT 3 10 0 GCGCGGGTGAGTACGTGCAGCAGAT 3 25 1 AGTCCATGTGGGGAAGGGAGTGCGCTGGTGATC 4 49 1 ATCAGACAACAGACGAGGAGCGCAAACAGTCTC 4 79 1 AACGAAGAAGGGAAGTACAGGGCAGAAAACGGA 5 12 0 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACG 6 10 1 TCCGCGAGGAGTTGACGGAGTGGGTGCGAATAT 6 87 1 AACAACGTGAGGGGTTGCCGTGC 6 164 1 TTGAGTGATCTTCGGGGCTGTGCTTTTAAAGTT 7 52 1 TGTCGGCCCTGCGGGTGCCGAGGATGAACGGC 8 9 0 TCGGTAGGCAATCCTTGCCGTGGTTTGTATGGG 8 102 0 ** ** **** ** MAP Score: 8.31013 Motif 12 GTTGACAACGGGGAGAAAAGCGTACGAGAATC 0 57 1 AGGTTGAAGGGGGAGCAAACTGTACGTGCTCA 0 98 1 ATATCGATACGGGAAAACAAAGATTACATGAG 0 126 0 TATCGATATGGGGTGCGATGCGCGCGGTGGAT 0 149 1 CTGGGGTGTGAGGGGAAAAACGGACAGG 0 282 1 TCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAG 1 16 1 TGCTGGATATGAGCGGAAACAGAATGACGTGT 1 49 1 AACAGACGAGGAGCGCAAACAGTCTCAGAACA 4 86 1 GGAAGTACAGGGCAGAAAACGGAAG 5 3 0 AGGGGTGAAAAACGAAGAAGGGAA 5 31 0 TAGCTACACAACGTGCGCACCGCACGGCGCGA 6 22 0 TAGAGAGCTCGCGTGAACACCGATTTTCCGCG 6 61 1 CACCCGCAGGGCCGACACGACGGTACTGCAAA 8 25 1 *** ****** * MAP Score: 7.60482 Motif 13 ATGCAAACGCGTGTGGGTGCGGTGTATGTCTTTGTTG 0 24 1 TCCCGTATCGATATGGGGTGCGATGCGCGCGGTGGAT 0 144 1 TGCGCGCGGTGGATACGCTCCTTCTCGACTGAGGTCG 0 167 1 GATTTTGTAGGACTGCGTAGGGGCGTGCGTCGATTGG 0 207 1 GATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGAC 0 270 1 TCTATCTGTGGAGCGCGTTACGTTGGGTAGCGTAAGA 1 81 1 ACGTTGGGTAGCGTAAGAGGGGGAGTGC 1 100 1 GGGTTGCGTACGGGTTAGATAAGAGCAG 2 1 1 GGGATAAACACTCTGCGCGGGTGAGTACGTGCAGCAG 3 11 1 GCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGAT 4 44 1 TTCTGAGACTGTTTGCGCTCCTCGTCTGTTGTCTGAT 4 79 0 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGT 6 10 1 CACGTTGTGTAGCTAGGAAGCGTAGAGAGCTCGCGTG 6 39 1 CGTGTCGGCCCTGCGGGTGCCGAGGATGAACGGC 8 7 0 * **** *** * * MAP Score: 5.30017 Motif 14 ACGCGTGTGGGTGCGGTGTATGTCTTTGTTGACAACG 0 30 1 TCGATATGGGGTGCGATGCGCGCGGTGGATACGCTCC 0 151 1 GCGTAGGGGCGTGCGTCGATTGGTGTGGTGCTATGTG 0 221 1 CAGGACTGGGGTGTGAGGGGAAAAACGGACAGG 0 277 1 CGTGTTCTATCTGTGGAGCGCGTTACGTTGGGTAGCG 1 76 1 GATAAACACTCTGCGCGGGTGAGTACGTGCAGCAGAT 3 13 1 GCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGAT 4 44 1 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGT 6 10 1 TTTTTGTGTAGTTCGCCGCATGTTCCTGAACAACGTG 6 136 1 ***** * * * ** MAP Score: 1.75913 Motif 15 CGTTAGGTTGAAGGGGGAGCAAACTGTACGT 0 94 1 GACCTCAGTCGAGAAGGAGCGTATCCACCGC 0 172 0 ATTTTGTAGGACTGCGTAGGGGCGTGCGTCG 0 208 1 CTCTTCCCCCAAGAAGAAGAGACTTT 1 5 0 AGCGCGTTACGTTGGGTAGCGTAAGAGGGGG 1 92 1 GGTAGCGTAAGAGGGGGAGTGC 1 106 1 TAGATAAGAGCAGGAGCAGATAGC 2 25 1 CACGTACTCACCCGCGCAGAGTGTTTATCCC 3 11 0 CCACAGTCTTCCGAGGAAGACGAGCGC 4 6 0 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGG 4 46 1 GATCAGACAACAGACGAGGAGCGCAAACAGT 4 78 1 GGGGTGAAAAACGAAGAAGGGAAGTACAGGG 5 23 0 GAGGAGAAGCGTTCGCGCCGT 6 0 1 ACGTTGTGTAGCTAGGAAGCGTAGAGAGCTC 6 40 1 GATTTTCCGCGAGGAGTTGACGGAGTGGGTG 6 82 1 CTACACAAAAAACAGGCAGCACTATTTATAT 6 116 0 TGAACAACGTGAGGGGTTGCCGTGC 6 162 1 CGTGGTTTGTATGGGTAAGAGGCAGGTGCTA 8 86 0 ****** **** MAP Score: 0.81703