AlignACE 3.0 10/20/99 AlignACE2 -i TP/TP_profile003_300.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944240331 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 TP0063 141 ribosomal protein S6 (rpsF) #1 TP0278 127 T. pallidum predicted coding region TP0278 #2 TP0279 45 ribosomal protein S1 (rpsA) #3 TP0283 177 lipopolysaccharide core biosynthesis protein (kdtB) #4 TP0382 83 T. pallidum predicted coding region TP0382 #5 TP0383 27 conserved hypothetical protein #6 TP0390 45 cell division protein (ftsZ) #7 TP0704 142 single-stranded-DNA-specific exonuclease (recJ) #8 TP0705 296 penicillin-binding protein (pbp-2) #9 TP0706 61 conserved hypothetical protein #10 TP0707 65 T. pallidum predicted coding region TP0707 #11 TP0742 117 GTP-binding protein (obg) #12 TP0743 30 ribosomal protein L27 (rpl27) #13 TP0745 106 ribosomal protein L21 (rplU) #14 TP0747 88 T. pallidum predicted coding region TP0747 #15 TP0946 151 glucose-inhibited division protein B (gidB) #16 TP1016 72 basic membrane protein (tpn39b) #17 TP1017 171 alanyl-tRNA synthetase (alaS) Motif 1 ACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCT 8 118 1 GCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCT 3 18 1 CAGAACGCGCGGCGAGACGCCAGCGTAGCGTAAAT 0 46 0 ACTAACGGTGCGAGGGATGGCTGCGTCTGCGTGGT 13 48 1 CTCGTCGGGGGGGGGGGGGTGGACGT 4 1 0 GGCGCCGACAGGTGAGGTGTCGACGCGCTCCTCCT 8 24 1 GGAGGAGTAGCGTGCGCAGAACGCGCGGCGAGACG 0 62 0 CAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCA 1 48 1 CTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTC 8 220 1 TCCCACCTATCGCGCGGTCGGTACGTAGTGGGGCC 8 152 1 CGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGG 9 35 0 CCTTGAGCCTGGTGCGAACCCCACGCCCAACGGTA 8 70 0 ACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGC 3 79 1 GGTGTCGTTCGTGCTTGGTGAGCGTCTCTGTGCG 13 9 1 AAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGC 7 55 1 CGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTT 11 81 1 TCGGTGTTCACGCGAGCTCTCTACGCTTCCTAGCT 3 49 0 GTACTCTCTCGGAGGAAGGGCTACGC 7 126 1 CCGCGCGATAGGTGGGAGGGGAACCACGCAGCCGG 8 134 0 ACCGCGCACAGCATGCGGCACGCGGTG 6 2 1 GAGGAGAAGCGTTCGCGCCGTGCGGTG 3 2 1 TTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGTCA 17 49 1 TCCTGAACAACGTGAGGGGTTGCCGTGC 3 159 1 CCTTCCCGCGGGTAGGCTGACCCCGTC 15 134 1 CACAGTCTTCCGAGGAAGACGAGCGC 1 1 0 ** *** * * *** MAP Score: 62.8714 Motif 2 GTACCGACCGCGCGATAGGTGGGAGGGGAACCACGCAG 8 138 0 GAAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATT 17 40 1 CAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAGAC 1 48 1 CAGAACGCGCGGCGAGACGCCAGCGTAGCGTAAATCTG 0 43 0 ACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCTCCC 8 118 1 CGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCGACGC 8 12 1 ACGCGGGGCGCGTGTGTGGTGCGTGTGGCCGTTCTGGC 7 68 1 TGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 23 1 GATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGGTG 13 63 1 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGC 3 2 1 TCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 5 0 TCCTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATAAGG 0 91 1 GTGACTGAGTCGCGGTTGTTACGGGGAGTTCTC 16 49 1 TAGAGGTGTAGCTGGGTGTTTTTTGGAGGTTTT 13 83 1 CCGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTG 7 48 1 CGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGGGCA 9 32 0 GCGGCTGCGTGTGATGCGTCTGTGCCCA 9 0 1 TACTGGACAACCGGCAACGGTATGGGTGACAATGTTCT 4 40 0 TTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTT 11 78 1 TGTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGT 8 209 1 TCTTGCGTCGGGTGGTACTCTCTCGGAGGAAGGGCTAC 7 112 1 TACACCGCGTGCCGCATGCTGTGCGCGGT 6 1 0 GTTCGTGCTTGGTGAGCGTCTCTGTGCGTTCCACTAAC 13 16 1 GGCCGTTCTGGCGGGTCCTCTTGCGTCGGGTGGTACTC 7 94 1 TATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGTCGC 16 24 1 GTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCTAGGAA 3 20 1 GGAGCTAGTCTGCAGCTGGTTTTTTGTT 10 0 1 AGGACACTGTCTTGAATGTTTGGGGTTGTTCACGCCAG 15 54 0 ** * * ** * ** * MAP Score: 50.3252 Motif 3 AAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGCGT 7 56 1 GCGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTT 11 80 1 CTTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGTCA 17 48 1 TACCGACCGCGCGATAGGTGGGAGGGGAACCACGCA 8 139 0 CCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTC 8 219 1 TCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAAA 3 87 1 TGTGCGTTCCACTAACGGTGCGAGGGATGGCTGCGT 13 38 1 TGTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACA 3 44 1 CACCCGACAAGGAGGAGTAGCGTGCGCAGAACGCGC 0 71 0 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGT 3 8 1 AGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAGA 1 49 1 ACCGCGTGCCGCATGCTGTGCGCGGT 6 0 0 TACGTGACGGTCGGGGCGCCGACAGGTG 8 2 1 ACAGCATGCGGCACGCGGTGTAGGGGAATGGGAGGG 6 17 1 CAGGTAGAACCGATACTGGGGGCGCCGGCTGCGTGG 8 110 1 TTCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 8 0 CTGGACAACCGGCAACGGTATGGGTGACAATGTTCT 4 40 0 ATCGCGCGGTCGGTACGTAGTGGGGCCGGTTTGAGA 8 160 1 CTTGTCGCAAGGTTGCTCAGAGAGTCCCCGTTTCTT 17 89 1 TGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTG 16 20 1 GGTGTCGTTCGTGCTTGGTGAGCGTCTCTGTGCG 13 8 1 ACGCTACGCTGGCGTCTCGCCGCGCGTTCTGCGCAC 0 50 1 TCTCTGTGGCACTACCGTTGGGCGTGGGGTTCGCAC 8 58 1 CCGTTCTCCTTTCTCCTGCGCGTGCGG 9 44 1 AGATGGCTTCGCCGACGGAAAGCGTCGCGGCACGCG 7 37 1 TGGCGGGTCCTCTTGCGTCGGGTGGTACTCTCTCGG 7 102 1 CGGGTGGTACTCTCTCGGAGGAAGGGCTACGC 7 120 1 CGTGGTTAGAGGTGTAGCTGGGTGTTTTTTGGAGGT 13 77 1 GCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAGCGT 3 26 1 GGCCTTTTTGTGTGTCTGCCTGAGTGCATCGTGCGG 8 201 1 AGTGCCACAGAGAGGAGGAGCGCGTCGACACCTCAC 8 35 0 GAAGGGTCAGGGGGTATTTGCGTGTCTGTGGGATCG 11 61 1 GCGAGGGATGGCTGCGTCTGCGTGGTTAGAGGTGTA 13 57 1 GCCAGCGTAGCGTAAATCTGTGTGCCGCATCAAGTC 0 27 0 TGCCTCCTGTGCTTTGTGTCTGTGGTGTAAGAAGGG 11 31 1 ** *** * * *** MAP Score: 46.5156 Motif 4 GTCGCGGCACGCGGGGCGCGTGTGTGGTGCGTGTGGCCGTTCT 7 60 1 GGTGTCGTTCGTGCTTGGTGAGCGTCTCTGTGCG 13 1 1 CGCACAGCATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 14 1 GAGCGTCTCTGTGCGTTCCACTAACGGTGCGAGGGATGGCTGC 13 29 1 GCTACACAACGTGCGCACCGCACGGCGCGAACGCTTCTCCTC 3 9 0 CGTACCGACCGCGCGATAGGTGGGAGGGGAACCACGCAGCCGG 8 134 0 CCCAACGGTAGTGCCACAGAGAGGAGGAGCGCGTCGACACCTC 8 37 0 CGAAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGT 17 39 1 CACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATA 3 78 1 TTATTTGCCACAGTCTTCCGAGGAAGACGAGCGC 1 1 0 CCTGTGCTTTGTGTCTGTGGTGTAAGAAGGGTCAGGGGGTATT 11 36 1 CTCTTGCGTCGGGTGGTACTCTCTCGGAGGAAGGGCTACGC 7 111 1 TTTAGAGGAAGATGGCTTCGCCGACGGAAAGCGTCGCGGCACG 7 28 1 TGGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGG 1 34 1 GTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTC 8 212 1 AAAAATTTACTGGACAACCGGCAACGGTATGGGTGACAATGTT 4 42 0 GAGGAGTAGCGTGCGCAGAACGCGCGGCGAGACGCCAGCGTAG 0 53 0 ACCGTTGGGCGTGGGGTTCGCACCAGGCTCAAGGTTTTGCAGG 8 71 1 GGATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGGTGTTTT 13 62 1 ATCGTAGGGGGCGTGCACAGGTTTTTGAGAGAGC 11 93 1 GACGGGGTCAGCCTACCCGCGGGAAGGATATTTTTCT 15 124 0 GGGGGTATTTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACAG 11 70 1 AAAAGTTCCAGGGAGCTTCGGATCACGACAAAGTCTATCTACA 14 16 0 TTCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 1 0 CGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCGACGCGCTCC 8 12 1 CCGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGG 9 35 0 AGGTTTTGCAGGTAGAACCGATACTGGGGGCGCCGGCTGCGTG 8 102 1 TCGGTACGTAGTGGGGCCGGTTTGAGAAAGCCGGCCTTTTTGT 8 169 1 GGAGCGCAAACAGTCTCAGAACACTCATGGGCGGATGATGGA 1 95 1 * * * ** ** * * * MAP Score: 44.789 Motif 5 TGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 23 1 ACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATAT 3 79 1 AGAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCTCCC 8 115 1 GGCACGCGGGGCGCGTGTGTGGTGCGTGTGGCCGTTCTGGC 7 65 1 GCTGGCGTCTCGCCGCGCGTTCTGCGCACGCTACTCCTCCT 0 57 1 CCCTACACCGCGTGCCGCATGCTGTGCGCGGT 6 1 0 TTTTGTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGT 8 206 1 ACTACGTACCGACCGCGCGATAGGTGGGAGGGGAACCACGC 8 140 0 GCGGCTGCGTGTGATGCGTCTGTGCCCATTTTCTC 9 4 1 AGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAG 1 43 1 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACG 3 2 1 TTCGCCGCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC 3 147 1 CCTCTCTGTGGCACTACCGTTGGGCGTGGGGTTCGCACCAG 8 56 1 AAGGACCTGTTTCCAAGCGTGTAGTGTGAGCT 10 43 1 GTCGGGGCGCCGACAGGTGAGGTGTCGACGCGCTCCTCCTC 8 19 1 CGAGGGATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGG 13 58 1 AAGATGGCTTCGCCGACGGAAAGCGTCGCGGCACGCGGGGC 7 36 1 CCGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGGG 9 34 0 AAAATTTACTGGACAACCGGCAACGGTATGGGTGACAATGT 4 43 0 TCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 2 0 GGTGCGAAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAA 17 35 1 TCGGTACGTAGTGGGGCCGGTTTGAGAAAGCCGGCCTTTTT 8 169 1 CCTCTTGCGTCGGGTGGTACTCTCTCGGAGGAAGGGCTACG 7 110 1 TTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTTTTT 11 78 1 GCTACTCCTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATAA 0 86 1 GTGTAAGAAGGGTCAGGGGGTATTTGCGTGTCTGTGGGATC 11 55 1 GAAAATCGGTGTTCACGCGAGCTCTCTACGCTTCCTAGCTA 3 48 0 GCAGCCATCCCTCGCACCGTTAGTGGAACGCACAGAGACGC 13 31 0 TCCGGCGTGTGTGCTGGTGACTGAGTCGCGGTTGTTACGGG 16 33 1 ** * * * * * * ** MAP Score: 44.5 Motif 6 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAG 1 46 1 ACCCGACAAGGAGGAGTAGCGTGCGCAGAACGCGCGGC 0 68 0 GATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATAT 3 82 1 ACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCTCCC 8 118 1 GTGCCACAGAGAGGAGGAGCGCGTCGACACCTCACCTG 8 32 0 TTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 2 0 CGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCGACGC 8 12 1 GCGGCTGCGTGTGATGCGTCTGTGCCCA 9 0 1 CATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 21 1 CGTCGCGGCACGCGGGGCGCGTGTGTGGTGCGTGTGGC 7 59 1 GTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACACCG 3 45 1 CCCGACGCAAGAGGACCCGCCAGAACGGCCACACGCAC 7 86 0 CCGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGGG 9 34 0 AAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCTA 3 16 1 ATATCCTTCCCGCGGGTAGGCTGACCCCGTC 15 130 1 GCCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTCT 8 218 1 GTACCGACCGCGCGATAGGTGGGAGGGGAACCACGCAG 8 138 0 TCAGACAACAGACGAGGAGCGCAAACAGTCTCAGAACA 1 80 1 CAGAACGCGCGGCGAGACGCCAGCGTAGCGTAAATCTG 0 43 0 CGTCGCGGTTAAGACAAAACGGGGGGTAGT 12 4 1 TTGTCGCAAGGTTGCTCAGAGAGTCCCCGTTTCTTTTT 17 90 1 ACGTAGTGGGGCCGGTTTGAGAAAGCCGGCCTTTTTGT 8 174 1 TGGCACTACCGTTGGGCGTGGGGTTCGCACCAGGCTCA 8 64 1 TCCGGCGTGTGTGCTGGTGACTGAGTCGCGGTTGTTAC 16 33 1 GCGTTCCACTAACGGTGCGAGGGATGGCTGCGTCTGCG 13 41 1 TGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGTC 17 45 1 CTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATAAGGTG 0 93 1 CCTACACCGCGTGCCGCATGCTGTGCGCGGT 6 3 0 CAGATGTTGACCGCAGCAGGGAAAAGGCGATAATACCC 17 140 1 ACACAAAGCACAGGAGGCACCTGGTTCCCTCTATAAAA 11 12 0 * ** * * * * *** MAP Score: 43.1985 Motif 7 ACGTCCACCCCCCCCCCCCCGACGAGAAAAA 4 7 1 ACCGTCAACGGCGCACACCGCACGATGCACTCAG 8 220 0 GCTACGCTGGCGTCTCGCCGCGCGTTCTGCGCAC 0 52 1 AGCTCACACTACACGCTTGGAAACA 10 50 0 CGCGCGTTCTGCGCACGCTACTCCTCCTTGTCGG 0 70 1 GATCACCAGCGCACTCCCTTCCCCACATGGACTG 1 48 0 TTCGCACACACCTCTAGCCTCTCGCAAGACAGTT 17 42 0 GGTGAGGTGTCGACGCGCTCCTCCTCTCTGTGGC 8 34 1 AAAAACCTGTGCACGCCCCCTACGATCCCACAGA 11 85 0 CCTGTCGGCGCCCCGACCGTCACGTA 8 2 0 CTGGTGCGAACCCCACGCCCAACGGTAGTGCCAC 8 63 0 CGCTCACCAAGCACGAACGACACC 13 0 0 GCGTGGTTCCCCTCCCACCTATCGCGCGGTCGGT 8 140 1 ATTTATATTCGCACCCACTCCGTCAACTCCTCGC 3 90 0 GCCAGAACGGCCACACGCACCACACACGCGCCCC 7 72 0 CCCAGCTACACCTCTAACCACGCAGACGCAGCCA 13 65 0 GCACGGCAACCCCTCACGTTGTTCAGGA 3 159 0 ACCGCACGGCGCGAACGCTTCTCCTC 3 2 0 ACCGCGCACAGCATGCGGCACGCGG 6 1 1 GCTACACAACGTGCGCACCGCACGGCGCGAACGC 3 18 0 TCCCCTCCCATTCCCCTACACCGCG 6 30 0 CGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGT 7 49 1 TCTGTGCGTTCCACTAACGGTGCGAGGGATGGCT 13 36 1 CAGGAACATGCGGCGAACTACACAAAAAACAGGC 3 130 0 CTCCTATGGACGGCTCACCTTATCAGGCTGCACT 0 112 0 TTCTCAAACCGGCCCCACTACGTACCGACCGCGC 8 163 0 CACGCAGCCGGCGCCCCCAGTATCGGTTCTACCT 8 111 0 GCGTAGCCCTTCCTCCGAGAGAGTA 7 127 0 GACGGGGTCAGCCTACCCGCGGGAAGGAT 15 132 0 ** * **** * ** MAP Score: 43.0991 Motif 8 TCCATCATCCGCCCATGAGTGTTCTGAGACTGTTTG 1 101 0 GTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTTTTTGAGA 11 82 1 AGCGTGCGCAGAACGCGCGGCGAGACGCCAGCGTAGCGTAA 0 48 0 TCTGTGCGTTCCACTAACGGTGCGAGGGATGGCTGCGTCTG 13 36 1 GCTGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGT 16 18 1 CGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGC 7 49 1 TGTTCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 5 0 TCGTCAAGGACCTGTTTCCAAGCGTGTAGTGTGAGCT 10 38 1 CAGGTAGAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCC 8 110 1 GGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTG 1 35 1 TGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTCTTC 8 217 1 CGCTACTCCTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATA 0 85 1 ACCGCGCACAGCATGCGGCACGCGGTGTAGGGGA 6 3 1 GGGTGCGAAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGA 17 34 1 GCTTTTATAGAGGGAACCAGGTGCCTCCTGTGCTTTGTGT 11 9 1 CCTCTCTGTGGCACTACCGTTGGGCGTGGGGTTCGCACCAG 8 56 1 TACGTGACGGTCGGGGCGCCGACAGGTGAGGTGTC 8 4 1 AAGGCGAAAACTTCAAGGCAAGAGGCAGAAGACCGTCAACG 8 244 0 ACAACGTGCGCACCGCACGGCGCGAACGCTTCTCCTC 3 6 0 CTATCGCGCGGTCGGTACGTAGTGGGGCCGGTTTGAGAAAG 8 158 1 GCGTAGCCCTTCCTCCGAGAGAGTACCACCCGACGCAA 7 114 0 TTATTTGCCACAGTCTTCCGAGGAAGACGAGCGC 1 3 0 TTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAAATAG 3 85 1 ATAGAAAAATATCCTTCCCGCGGGTAGGCTGACCCCGTC 15 122 1 CGCACGTTGTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAA 3 37 1 CCCAGCTACACCTCTAACCACGCAGACGCAGCCATCCCTCG 13 58 0 GGTGATCAGACAACAGACGAGGAGCGCAAACAGTCTCAGAA 1 75 1 GTCAGATGTTGACCGCAGCAGGGAAAAGGCGATAATACCCT 17 138 1 * * *** * * * * * MAP Score: 41.7665 Motif 9 ACTACGTACCGACCGCGCGATAGGTGGGAGGGGAACCACGC 8 140 0 AGAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCTCCC 8 115 1 CCGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTG 7 48 1 CCGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGGG 9 34 0 TCCCCTACACCGCGTGCCGCATGCTGTGCGCGGT 6 3 0 TACGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCG 8 5 1 CTTTTTGTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCC 8 204 1 CGAGGGATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGG 13 58 1 TTTTAAGGGTGCGAAACTGTCTTGCGAGAGGCTAGAGGTGT 17 28 1 GTATTTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGT 11 74 1 ACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATAT 3 79 1 TTCCTAGCTACACAACGTGCGCACCGCACGGCGCGAACGCT 3 17 0 GACGGGGTCAGCCTACCCGCGGGAAGGATATTTTTCT 15 124 0 ACTACCGTTGGGCGTGGGGTTCGCACCAGGCTCAAGGTTTT 8 68 1 GCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGG 1 36 1 GCAGCCATCCCTCGCACCGTTAGTGGAACGCACAGAGACGC 13 31 0 ACACACGCCGGAGAAACTATACGCAGCAGGGCAAG 16 4 0 TCGGTACGTAGTGGGGCCGGTTTGAGAAAGCCGGCCTTTTT 8 169 1 GGGTGGTACTCTCTCGGAGGAAGGGCTACGC 7 121 1 GCTGGCGTCTCGCCGCGCGTTCTGCGCACGCTACTCCTCCT 0 57 1 TTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 0 0 CGTTTAGGGTCAGATGTTGACCGCAGCAGGGAAAAGGCGAT 17 130 1 CCCAACGGTAGTGCCACAGAGAGGAGGAGCGCGTCGACACC 8 39 0 TCCGGCGTGTGTGCTGGTGACTGAGTCGCGGTTGTTACGGG 16 33 1 AAAAAGCTCCCCGAAACAGAAAAGTTCCAGGGAGCTTCGGA 14 37 0 AAAATTTACTGGACAACCGGCAACGGTATGGGTGACAATGT 4 43 0 CCTGTGCTTTGTGTCTGTGGTGTAAGAAGGGTCAGGGGGTA 11 36 1 * * * * ** * * ** MAP Score: 38.4377 Motif 10 AACGCGCGGCGAGACGCCAGCGTAGCGTAAATCTGTGTGCCGC 0 35 0 CGACAAGGAGGAGTAGCGTGCGCAGAACGCGCGGCGAGACGCC 0 60 0 CTTATCAGGCTGCACTAGACTCACCCGACAAGGAGGAGTAGCG 0 85 0 GCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTG 1 36 1 TCCATCATCCGCCCATGAGTGTTCTGAGACTGTTTGCGCTCC 1 95 0 GCTACACAACGTGCGCACCGCACGGCGCGAACGCTTCTCCTC 3 9 0 CACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATA 3 78 1 AATGTTCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 5 0 TTCCCCTACACCGCGTGCCGCATGCTGTGCGCGGT 6 2 0 GCCGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGC 7 47 1 CGTGTGTGGTGCGTGTGGCCGTTCTGGCGGGTCCTCTTGCGTC 7 78 1 GCGTAGCCCTTCCTCCGAGAGAGTACCACCCGA 7 119 0 GGAGCGCGTCGACACCTCACCTGTCGGCGCCCCGACCGTCACG 8 12 0 GAGGTGTCGACGCGCTCCTCCTCTCTGTGGCACTACCGTTGGG 8 37 1 ATAGGTGGGAGGGGAACCACGCAGCCGGCGCCCCCAGTATCGG 8 119 0 CCCACCTATCGCGCGGTCGGTACGTAGTGGGGCCGGTTTGAGA 8 153 1 CGGTTTGAGAAAGCCGGCCTTTTTGTGTGTCTGCCTGAGTGCA 8 186 1 GTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGG 8 210 1 ACACAAAAAGGCGAAAACTTCAAGGCAAGAGGCAGAAGACCGT 8 249 0 AGGGAACCAGGTGCCTCCTGTGCTTTGTGTCTGTGGTGTAAGA 11 20 1 GGTGTAAGAAGGGTCAGGGGGTATTTGCGTGTCTGTGGGATCG 11 54 1 ATCGTAGGGGGCGTGCACAGGTTTTTGAGAGAGC 11 93 1 GAGCGTCTCTGTGCGTTCCACTAACGGTGCGAGGGATGGCTGC 13 29 1 ATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGGTGTTTTTT 13 64 1 GACGGGGTCAGCCTACCCGCGGGAAGGATATTTTTCT 15 124 0 TTGCCCTGCTGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGAC 16 11 1 AAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGTCA 17 41 1 CAAGGATCTTGTCGCAAGGTTGCTCAGAGAGTCCCCGTTTCTT 17 82 1 GGGTCAGATGTTGACCGCAGCAGGGAAAAGGCGATAATACCCT 17 136 1 * * * * * * * * * * MAP Score: 14.8605 Motif 11 AGAACGCGCGGCGAGACGCCAGCGTAGCGTAAATCTG 0 43 0 GCACGCTACTCCTCCTTGTCGGGTGAGTCTAGTGCAG 0 82 1 TGGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTG 1 34 1 GACTGTTTGCGCTCCTCGTCTGTTGTCTGATCACCAG 1 73 0 GGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGT 3 12 1 TATAAATAGTGCTGCCTGTTTTTTGTGTAGTTCGCCG 3 117 1 TCCTGAACAACGTGAGGGGTTGCCGTGC 3 159 1 TTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 2 0 ACTGGACAACCGGCAACGGTATGGGTGACAATGTTCT 4 40 0 TACACCGCGTGCCGCATGCTGTGCGCGGT 6 2 0 GCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 24 1 CGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTG 7 49 1 TGTGGTGCGTGTGGCCGTTCTGGCGGGTCCTCTTGCG 7 82 1 CTTGCGTCGGGTGGTACTCTCTCGGAGGAAGGGCTAC 7 113 1 TACGTGACGGTCGGGGCGCCGACAGGTG 8 1 1 CCTCCTCTCTGTGGCACTACCGTTGGGCGTGGGGTTC 8 53 1 GAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCT 8 116 1 TACCGACCGCGCGATAGGTGGGAGGGGAACCACGCAG 8 138 0 CACCTATCGCGCGGTCGGTACGTAGTGGGGCCGGTTT 8 155 1 GTTTGAGAAAGCCGGCCTTTTTGTGTGTCTGCCTGAG 8 188 1 GTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGAC 8 214 1 GGTGTGCGCCGTTGACGGTCTTCTGCCTCTTGCCTTG 8 235 1 TCGCCTTTTTGTGTTCCGCTCTTGGCCC 8 278 1 GCGGCTGCGTGTGATGCGTCTGTGCCCATT 9 3 1 GGAACCAGGTGCCTCCTGTGCTTTGTGTCTGTGGTGT 11 22 1 TGTAAGAAGGGTCAGGGGGTATTTGCGTGTCTGTGGG 11 56 1 TATTTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACA 11 75 1 GGTGTCGTTCGTGCTTGGTGAGCGTCTCTG 13 3 1 GTCTCTGTGCGTTCCACTAACGGTGCGAGGGATGGCT 13 33 1 AGAGGTGTAGCTGGGTGTTTTTTGGAGGTTTT 13 84 1 CATATTTACAGGTGCTCGATTTGTTTGCTAGCATGGA 15 13 0 CTGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTG 16 19 1 TGACTGAGTCGCGGTTGTTACGGGGAGTTCTC 16 50 1 AAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATT 17 41 1 **** ** ** * * MAP Score: 12.4433 Motif 12 ACGCTACGCTGGCGTCTCGCCGCGCGTTCTGCGCACGCTAC 0 50 1 CGCTACTCCTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATA 0 85 1 GGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTG 1 35 1 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGT 3 8 1 GCGTGAACACCGATTTTCCGCGAGGAGTTGACGGAGTGGGT 3 71 1 GCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC 3 153 1 TTTTTCTCGTCGGGGGGGGGGGGGTGGACGT 4 0 0 ACCGCGCACAGCATGCGGCACGCGGTGTAGGG 6 1 1 ATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA 6 22 1 CGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGC 7 49 1 GCGTGTGTGGTGCGTGTGGCCGTTCTGGCGGGTCCTCTTGC 7 77 1 TACGTGACGGTCGGGGCGCCGACAGGTGAGGTGTC 8 4 1 TCTGTGGCACTACCGTTGGGCGTGGGGTTCGCACCAGGCTC 8 60 1 GGGGTTCGCACCAGGCTCAAGGTTTTGCAGGTAGAACCGAT 8 83 1 CAGGTAGAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCC 8 110 1 CACTACGTACCGACCGCGCGATAGGTGGGAGGGGAACCACG 8 141 0 CCTTTTTGTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGC 8 203 1 GCGGCTGCGTGTGATGCGTCTGTGCCCATTTT 9 1 1 CCGCACGCGCAGGAGAAAGGAGAACGGAGAAAATGG 9 35 0 TGCCTCCTGTGCTTTGTGTCTGTGGTGTAAGAAGGGTCAGG 11 31 1 GGGGTATTTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACA 11 71 1 CGTCGCGGTTAAGACAAAACGGGGGGTAGT 12 5 1 TCTGTGCGTTCCACTAACGGTGCGAGGGATGGCTGCGTCTG 13 36 1 CGTGGTTAGAGGTGTAGCTGGGTGTTTTTTGGAGGTTTT 13 77 1 CGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGTCGCG 16 22 1 ** * * * * ** * * MAP Score: 8.77169 Motif 13 ATTTACGCTACGCTGGCGTCTCGCCGCGCGTTCTGCGC 0 46 1 ACAACGTGCGCACCGCACGGCGCGAACGCTTCTCCTC 3 9 0 ACGTCCACCCCCCCCCCCCCGACGAGAAA 4 1 1 ACCGCGCACAGCATGCGGCACGCGGTGTAGGG 6 4 1 AGAGGAAGATGGCTTCGCCGACGGAAAGCGTCGCGGCA 7 31 1 GACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGT 7 50 1 TGGTGCGTGTGGCCGTTCTGGCGGGTCCTCTTGCGTCG 7 84 1 GTGGTACTCTCTCGGAGGAAGGGCTACGC 7 123 1 CTCACCTGTCGGCGCCCCGACCGTCACGTA 8 2 0 GTGGCACTACCGTTGGGCGTGGGGTTCGCACCAGGCTC 8 63 1 AGGGGAACCACGCAGCCGGCGCCCCCAGTATCGGTTCT 8 115 0 GTTCCCCTCCCACCTATCGCGCGGTCGGTACGTAGTGG 8 145 1 GCGGTCGGTACGTAGTGGGGCCGGTTTGAGAAAGCCGG 8 165 1 TGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGAC 8 213 1 CTCCGTTCTCCTTTCTCCTGCGCGTGCGG 9 42 1 CGCACAGAGACGCTCACCAAGCACGAACGACACC 13 6 0 CGTCTCTGTGCGTTCCACTAACGGTGCGAGGGATGGCT 13 32 1 GTGACTGAGTCGCGGTTGTTACGGGGAGTTCTC 16 49 1 *** * * *** ** MAP Score: 6.90032 Motif 14 AGACTTGATGCGGCACACAGATTTACGCTA 0 26 1 CGCAGAACGCGCGGCGAGACGCCAGCGTAG 0 53 0 GGAGTAGCGTGCGCAGAACGCGCGGCGAGA 0 64 0 TAGACTCACCCGACAAGGAGGAGTAGCGTG 0 83 0 ACTCCCTTCCCCACATGGACTGCCGCTTAT 1 40 0 CAGACGAGGAGCGCAAACAGTCTCAGAACA 1 88 1 GCACCGCACGGCGCGAACGCTTCTCCTC 3 8 0 CACAACGTGCGCACCGCACGGCGCGAACGC 3 18 0 CACCGATTTTCCGCGAGGAGTTGACGGAGT 3 78 1 CTATTTATATTCGCACCCACTCCGTCAACT 3 96 0 GCACGGCAACCCCTCACGTT 3 167 0 ACGTCCACCCCCCCCCCCCCGACG 4 4 1 CCACCCCCCCCCCCCCGACGAGAAAAAGAA 4 14 1 TACTGGACAACCGGCAACGGTATGGGTGAC 4 48 0 ACCGCGCACAGCATGCGGCAC 6 1 1 GCACAGCATGCGGCACGCGGTGTAGGGGAA 6 15 1 ATGGCTTCGCCGACGGAAAGCGTCGCGGCA 7 39 1 GAAAGCGTCGCGGCACGCGGGGCGCGTGTG 7 54 1 GCCACACGCACCACACACGCGCCCCGCGTG 7 67 0 CCCGACGCAAGAGGACCCGCCAGAACGGCC 7 94 0 CGAGAGAGTACCACCCGACGCAAGAGGACC 7 107 0 TCACCTGTCGGCGCCCCGACCGTCACGTA 8 9 0 GAGAGGAGGAGCGCGTCGACACCTCACCTG 8 32 0 AACGGTAGTGCCACAGAGAGGAGGAGCGCG 8 47 0 GGTGCGAACCCCACGCCCAACGGTAGTGCC 8 65 0 CACGCAGCCGGCGCCCCCAGTATCGGTTCT 8 115 0 GGGAGGGGAACCACGCAGCCGGCGCCCCCA 8 126 0 GGTTCCCCTCCCACCTATCGCGCGGTCGGT 8 144 1 CTTTCTCAAACCGGCCCCACTACGTACCGA 8 169 0 ATGCACTCAGGCAGACACACAAAAAGGCCG 8 200 0 ACCGTCAACGGCGCACACCGCACGATGCAC 8 224 0 GACGCATCACACGCAGCCGC 9 0 0 GAGAAAATGGGCACAGACGCATCACACGCA 9 15 0 CCGCACGCGCAGGAGAAAGGAG 9 49 0 AAACAAAAAACCAGCTGCAGACTAGCTCC 10 9 0 ACACAAAGCACAGGAGGCACCTGGTTCCCT 11 20 0 CCTTCTTACACCACAGACACAAAGCACAGG 11 36 0 CCCTACGATCCCACAGACACGCAAATACCC 11 72 0 AAAAACCTGTGCACGCCCCCTACGATCCCA 11 89 0 TTAGTGGAACGCACAGAGACGCTCACCAAG 13 23 0 CGCAGCCATCCCTCGCACCGTTAGTGGAAC 13 43 0 CTCTAACCACGCAGACGCAGCCATCCCTCG 13 58 0 TAAAAAGCTCCCCGAAACAGAAAAGTTCCA 14 49 0 GTCAGCCTACCCGCGGGAAGGATATTTTTC 15 125 0 AGCACACACGCCGGAGAAACTATACGCAGC 16 18 0 TTGACAGAATTCGCACACACCTCTAGCCTC 17 55 0 CAGATGTTGACCGCAGCAGGGAAAAGGCGA 17 140 1 ********** MAP Score: 5.26947 Motif 15 GTGCGCAGAACGCGCGGCGAGACGCCAGCGTAGCG 0 51 0 GGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGAT 1 46 1 GAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTG 3 13 1 CTCGTCGGGGGGGGGGGGGTGGACGT 4 1 0 CACAGCATGCGGCACGCGGTGTAGGGGAATGGGAG 6 16 1 ACACGCGCCCCGCGTGCCGCGACGCTTTCCGTCGG 7 48 0 GCGGCACGCGGGGCGCGTGTGTGGTGCGTGTGGCC 7 63 1 TGTGTGGTGCGTGTGGCCGTTCTGGCGGGTCCTCT 7 80 1 TACGTGACGGTCGGGGCGCCGACAGGTG 8 3 1 GACAGGTGAGGTGTCGACGCGCTCCTCCTCTCTGT 8 30 1 CACTACCGTTGGGCGTGGGGTTCGCACCAGGCTCA 8 67 1 AGGGGAACCACGCAGCCGGCGCCCCCAGTATCGGT 8 118 0 ACCGCGCGATAGGTGGGAGGGGAACCACGCAGCCG 8 135 0 TCCCACCTATCGCGCGGTCGGTACGTAGTGGGGCC 8 152 1 GCCTTTTTGTGTGTCTGCCTGAGTGCATCGTGCGG 8 202 1 ATCGTGCGGTGTGCGCCGTTGACGGTCTTCTGCCT 8 228 1 GGGTATTTGCGTGTCTGTGGGATCGTAGGGGGCGT 11 72 1 CTTGGTGAGCGTCTCTGTGCGTTCCACTAACGGTG 13 23 1 GTTCCACTAACGGTGCGAGGGATGGCTGCGTCTGC 13 43 1 AGAGGTGTAGCTGGGTGTTTTTTGGAGGTTTT 13 84 1 GAAAAATATCCTTCCCGCGGGTAGGCTGACCCCGT 15 125 1 ATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGTC 16 25 1 *** *** * * ** MAP Score: 2.32174 Motif 16 AAGACTTGATGCGGCACACAGATTTACGCTA 0 25 1 AGAACGCGCGGCGAGACGCCAGCGTAGCGTA 0 49 0 AGTAGCGTGCGCAGAACGCGCGGCGAGACGC 0 61 0 CAGCCTGATAAGGTGAGCCGTCCATAGGAGT 0 116 1 CAACGTGCGCACCGCACGGCGCGAACGCTTC 3 15 0 ACGTTGTTCAGGAACATGCGGCGAACTACAC 3 141 0 TTCTCGTCGGGGGGGGGGGGGTGGACGT 4 7 0 ACCGCGCACAGCATGCGGCAC 6 0 1 CGCACAGCATGCGGCACGCGGTGTAGGGGAA 6 14 1 GGAAAGCGTCGCGGCACGCGGGGCGCGTGTG 7 53 1 ACGGCCACACGCACCACACACGCGCCCCGCG 7 69 0 ACCCGACGCAAGAGGACCCGCCAGAACGGCC 7 94 0 GTACTCTCTCGGAGGAAGGGCTACGC 7 126 1 TGACGGTCGGGGCGCCGACAGGTGAGGTGTC 8 14 1 GCCACAGAGAGGAGGAGCGCGTCGACACCTC 8 37 0 CGTGGGGTTCGCACCAGGCTCAAGGTTTTGC 8 80 1 GAACCACGCAGCCGGCGCCCCCAGTATCGGT 8 118 0 GATGCACTCAGGCAGACACACAAAAAGGCCG 8 200 0 GGCGCACACCGCACGATGCACTCAGGCAGAC 8 214 0 AAGACCGTCAACGGCGCACACCGCACGATGC 8 226 0 AAGGCAAGAGGCAGAAGACCGTCAACGGCGC 8 240 0 GGGCCAAGAGCGGAACACAAAAAGGCGAAA 8 276 0 GGGCACAGACGCATCACACGCAGCCGC 9 6 0 GCAGGAGAAAGGAGAACGGAGAAAATGGGCA 9 32 0 GACACAAAGCACAGGAGGCACCTGGTTCCCT 11 20 0 CCCTTCTTACACCACAGACACAAAGCACAGG 11 36 0 AACAGGATAAGCAGGACACTGTCTTGAATGT 15 73 0 GAAACTATACGCAGCAGGGCAAG 16 2 0 AAAAATATAAGGAGCACACAC 17 0 0 AAACTGTCTTGCGAGAGGCTAGAGGTGTGTG 17 41 1 GATGTTGACCGCAGCAGGGAAAAGGCGATAA 17 142 1 ********* * MAP Score: 0.171504