***********
*Regulon 1 *
***********

AA/AA_operons009_100.ace 9
aq_1256	1	feoB	
aq_2170	2	ihfB	
aq_609	3	aq_609	
dnaG	1	himA	rpsA	
era1	2	era1	
hflX	1	purA	aidB	hflX	
rplN	1	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rpoD	1	himA	rpsA	
thdF	1	yidY	tnaB	thdF	
thrA	3	aq_1815	

AA/AA_operons009_300.ace 2
aq_1137	1	rpiB	
aq_1256	2	feoB	
aq_609	5	aq_609	
dnaG	1	himA	rpsA	
gatC	1	gatD	gatR_2	cmk	recJ	
hflX	2	hflX	
rplN	2	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rpmA	1	rpmA	
rpoD	1	himA	rpsA	
rpsA	1	himA	rpsA	
thdF	1	thdF	
thrA	5	aq_1815	

AA/AA_sum_all009_100.ace 2
aq_1137	1	rpiB	
aq_1256	2	feoB	
aq_609	5	aq_609	
dnaG	1	himA	rpsA	
gatC	1	gatD	gatR_2	cmk	recJ	
hflX	2	hflX	
rplN	2	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rpmA	1	rpmA	
rpoD	1	himA	rpsA	
rpsA	1	himA	rpsA	
thdF	1	thdF	
thrA	5	aq_1815	

AA/AA_sum_all009_300.ace 3
aq_1137	1	rpiB	
aq_1256	2	feoB	
aq_609	5	aq_609	
dnaG	1	himA	rpsA	
gatC	1	gatD	gatR_2	cmk	recJ	
hflX	1	hflX	
rplN	2	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rpmA	2	rpmA	
rpoD	1	himA	rpsA	
rpsA	1	himA	rpsA	
thdF	1	thdF	
thrA	2	aq_1815	


***********
*Regulon 2 *
***********

AA/AA_operons042_100.ace 4
aq_1996	1	era1	htpX	
aq_759	3	truA	ispA	
folE	2	galS	mglC	mglB	mglA	folE	
ispB	1	ispB	
pgi	1	truA	ispA	
tktA	3	tktA	

AA/AA_sum_all047_100.ace 4
aq_1996	1	era1	htpX	
aq_759	3	truA	ispA	
folE	2	galS	mglC	mglB	mglA	folE	
ispB	1	ispB	
pgi	1	truA	ispA	
tktA	3	tktA	

AA/AA_operons042_300.ace 3
aq_1763	2	tktA	
aq_1996	1	era1	htpX	
aq_759	3	truA	ispA	
folE	2	galS	mglC	mglB	mglA	folE	
ispB	1	ispB	
pgi	1	truA	ispA	
tktA	3	tktA	

AA/AA_sum_all047_300.ace 3
aq_1763	2	tktA	
aq_1996	1	era1	htpX	
aq_759	3	truA	ispA	
folE	2	galS	mglC	mglB	mglA	folE	
ispB	1	ispB	
pgi	1	truA	ispA	
tktA	3	tktA	


***********
*Regulon 3 *
***********

AA/AA_operons001_300.ace 9
aq_1267	3	mpp	
aq_260	2	nusA	aq_260	
aq_759	3	truA	
hvsT	2	mpp	
nusG	2	nusG	rplA	rplK	rpoB	rpoC	rplJ	rplL	
pkcI	2	ribF	
rplN	1	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	
rplT	1	pgsA2	
rpmJ	1	rpoA	rpsK	rpsM	rplQ	rpsD	
rpsL2	1	rpsG2	rpsL2	
rpsQ	1	rpsQ	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	
ymxG	1	ymxG	

AA/AA_operons001_100.ace 6
aq_759	3	truA	
degT	1	lepA	
nusG	3	nusG	rplA	rplK	rpoB	rpoC	rplJ	rplL	
pgi	1	truA	
rplN	1	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	
rplT	1	pgsA2	
rpoB	1	rpoB	rpoC	
rpsL1	1	rpsG1	rpsL1	
rpsO	1	mtr	phpA	rpsO	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	
tufA2	1	tufA2	rpmG	
ymxG	2	ymxG	

AA/AA_sum_all001_100.ace 6
aq_759	3	truA	ispA	
degT	1	lepA	
nusG	3	nusG	rplA	rplK	rpoB	rpoC	rplJ	rplL	
pgi	1	truA	ispA	
rplN	1	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rplT	1	pgsA2	
rpoB	1	rpoB	rpoC	
rpsL1	1	rpsG1	rpsL1	
rpsO	1	mtr	phpA	rpsO	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	
tufA2	1	tufA2	rpmG	
ymxG	2	ymxG	


***********
*Regulon 4 *
***********

AA/AA_operons002_100.ace 3
aq_1148	1	pabB	
aq_1554	1	trpA	
aq_1666	1	accC1	
aq_811	1	pyrC	
argF	1	argF	
carA	3	carA	pyrB	
cycB2	1	trpA	
efp	1	accB	
icd	2	pycA	pycB	
ntrC2	1	trpC	
nuoD1	1	trpG	
pyrD	1	pyrD	
pyrDB	2	pyrDB	
trpB1	1	trpB1	
trpD1	2	trpD1	

AA/AA_operons002_300.ace 4
aq_1148	1	pabB	
aq_1666	1	accC1	
aq_811	1	pyrC	
argF	1	argF	
carA	3	carA	pyrB	
cycB2	1	trpA	
efp	1	accB	
icd	2	pycA	pycB	
ntrC2	1	trpC	
nuoD1	1	trpG	
pyrD	1	pyrD	
pyrDB	2	pyrDB	
trpB1	1	trpB1	
trpD1	2	trpD1	

AA/AA_sum_all004_100.ace 8
aq_1148	1	pabB	
aq_1554	1	trpA	
aq_1666	1	accC1	
aq_811	1	pyrC	
argF	1	argF	
carA	3	carA	pyrB	
cycB2	1	trpA	
efp	1	accB	
icd	2	pycA	pycB	
ntrC2	1	trpC	
nuoD1	1	trpG	
trpB1	1	trpB1	
trpD1	2	trpD1	


***********
*Regulon 5 *
***********

AA/AA_operons007_300.ace 2
aq_1036	2	aq_1035	aq_1036	
cysM	1	gltB	
fdoG	5	fdoH	fdoG	fdhE	fdoI	
gltD	1	gltD	
lpdA	1	lpdA	
nox	1	nox	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	dmsB2	
trxB	2	trxB	

AA/AA_sum_all008_300.ace 2
aq_1036	2	aq_1035	aq_1036	
cysM	1	gltB	
fdoG	5	fdoH	fdoG	fdhE	fdoI	
gltD	1	gltD	
lpdA	1	lpdA	
nox	1	nox	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	dmsB2	
trxB	2	trxB	

AA/AA_sum_all008_300.ace 5
aq_1036	2	aq_1035	aq_1036	
aq_503	2	trxB	
cysM	1	gltB	
dmsB2	1	dmsB2	
fdoG	4	fdoH	fdoG	fdhE	fdoI	
lpdA	1	aq_737	lpdA	
nirB	1	trpD2	narB	nasA	nirB	
nox	1	nox	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	dmsB2	
trxB	3	trxB	


***********
*Regulon 6 *
***********

AA/AA_sum_all002_100.ace 5
aq_1191	1	aq_1191	
aq_1400	2	aq_1404	
aq_1858	3	flgE	
flgG2	1	flgA	flgG2	
fliP	2	fliP	
fliQ	1	fliQ	fliR	
frdB2_topA	1	fliG	topA	
motA	1	motB2	motA	motB1	
topG1	1	topG1	
topG2	1	topG2	
vacB	1	aidB	flgG1	

AA/AA_sum_all002_300.ace 6
aq_1191	1	aq_1191	
aq_1400	2	aq_1404	
aq_1858	3	flgE	
flgG2	1	flgA	flgG2	
fliP	2	fliP	
fliQ	1	fliQ	fliR	
frdB2_topA	1	fliG	topA	
motA	1	motB2	motA	motB1	
topG1	1	topG1	
vacB	1	aidB	flgG1	


***********
*Regulon 7 *
***********

AA/AA_profile001_100.ace 7
aq_041	1	aq_041	
aq_1343	2	aq_1343	
aq_159	1	aq_159	
aq_1752	2	aq_1752	
aq_531	1	aq_531	
aq_943	2	aq_943	
aq_990	1	aq_985	
flgG2	1	flgA	
nifU	2	aq_898	
pcnB1	1	aq_414	
petA	1	aq_041	


***********
*Regulon 8 *
***********

AA/AA_sum_all051_300.ace 3
aq_1148	1	pabB	dhaT	
aq_1858	3	flgE	aq_1861	
aq_1861	1	aq_1861	
aq_274	1	aq_274	
aspC4	2	aq_274	
dhaT	1	pabB	dhaT	


***********
*Regulon 9 *
***********

AA/AA_profile041_100.ace 3
aq_1525	1	aq_1527	
aq_1526	1	aq_1527	
aq_1527	2	aq_1527	
ctc	2	ctc	
icd	1	aq_1527	
motA	1	motB2	
pycA	1	aq_1527	


***********
*Regulon 10 *
***********

AA/AA_sum_all028_300.ace 2
aq_609	6	aq_609	thrC1	
asd	4	asd	
dapB	2	dapB	
thrA	2	aq_1815	thrA	
thrB	1	thrB	


***********
*Regulon 11 *
***********

AA/AA_sum_all017_300.ace 2
aco	1	aco	
aq_142	2	gltA	
ftsH	1	leuC	
icd	3	aq_1527	pycA	pycB	icd	
ilvB	2	uhpT	ilvB	
leuA1	1	leuA1	
leuA2	1	leuA2	
leuB	1	leuC	leuB	
leuD	2	leuD	
metE	1	galF	pfkA	
ntrC2	3	trpC	aco	


***********
*Regulon 12 *
***********

AA/AA_profile004_300.ace 2
aq_1247	2	aq_1248	
aq_759	5	truA	ispA	
glgP	1	mpg	
mutY1	3	mutY1	
pyrG	1	pyrG	


***********
*Regulon 13 *
***********

AA/AA_sum_all003_300.ace 7
abcT3	2	abcT3	
aq_512	1	aq_512	
aq_601	3	glmU	
bcsA	1	bcsA	
mtfA	3	mtfA	abcT3	
mtfB	1	rfe	spsK	mtfB	mtfC	
nsd	3	nsd	
rfaD	3	rfaD	
rfaG	1	rfaG	


***********
*Regulon 14 *
***********

AA/AA_operons002_300.ace 7
aq_1148	2	pabB	
aq_1515	1	pycA	pycB	
aq_1549	1	trpA	
aq_1554	1	trpA	
aq_1666	1	accC1	
carA	4	carA	pyrB	
carB1	1	carB1	
efp	1	accB	
gua	1	accD	
guaA	1	guaA	
nirB	2	trpD2	
oadA	1	oadA	
pyrD	3	pyrD	
serA	1	umpS	


***********
*Regulon 15 *
***********

AA/AA_sum_all004_300.ace 3
aq_1148	2	pabB	
aq_1516	1	aq_1527	pycA	pycB	
aq_1666	1	accC1	
aq_811	1	pyrC	
carA	8	carA	pyrB	
carB1	1	carB1	
efp	1	accB	
nirB	1	trpD2	
ntrC2	1	trpC	
oadA	1	oadA	
trpE	1	trpE	trpD	


***********
*Regulon 16 *
***********

AA/AA_sum_all001_300.ace 10
aq_1267	1	mpp	
aq_1270	1	mpp	
aq_759	2	truA	ispA	
argS	1	rnpH	
hvsT	2	mpp	
nusG	1	nusG	rplA	rplK	rpoB	rpoC	rplJ	rplL	
pkcI	2	ribF	
rplT	1	pgsA2	
rpmJ	1	rpoA	rpsK	rpsM	rplQ	rpsD	dmsB2	
rpsL1	1	rpsG1	rpsL1	
rpsQ	1	rpsQ	
secY	1	secY	rpoA	rpsK	rpsM	rplQ	kad	map	infA	rpsD	dmsB2	
truB	1	truB	
tufA2	1	tufA2	rpmG	
ymxG	1	ymxG	


***********
*Regulon 17 *
***********

AA/AA_sum_all009_300.ace 14
aq_1137	1	rpiB	
aq_2066	1	obg	
aq_2170	1	ihfB	
aq_609	3	aq_609	
era1	2	era1	htpX	
gatC	1	gatR_2	gatD	cmk	recJ	
rplN	2	rplE	rplN	rpsE	rplF	rpsH	rplR	rplX	rplO	rpsN	rplU	
rpmA	1	yhbE	rpmA	
rpoD	1	himA	rpsA	
thdF	1	yidY	tnaB	thdF	rho	
thrA	1	aq_1815