***********
*Regulon 1 *
***********

CP/CP_operons002_300.ace 1
CPn0397	2	yhfO	
CPn0692	3	yfhO_1	CPn0690	CPn0692	
CPn0921	1	aas	
pbp2	3	CPn0693	
pgmA	2	yfhO_2	CPn0861	
yaeM	1	yaeL	yaeM	
yaeS	2	yaeS	cdsA	
ytgA	3	yaeL	yaeM	

CP/CP_sum_all005_100.ace 1
CPn0397	2	yhfO	
CPn0692	3	yfhO_1	CPn0690	CPn0692	
CPn0921	1	aas	
pbp2	3	CPn0693	
pgmA	2	yfhO_2	CPn0861	CPn0856	fliI	
yaeM	1	yaeL	yaeM	
yaeS	2	yaeS	cdsA	cmk	

CP/CP_sum_all005_100.ace 5
CPn0397	2	yhfO	
CPn0692	3	yfhO_1	CPn0690	CPn0692	
CPn0921	1	aas	
pbp2	2	CPn0693	
pgmA	1	yfhO_2	CPn0861	CPn0856	fliI	
rs2	2	rs2	tsf	pyrH	rrf	
yaeS	3	yaeS	cdsA	cmk	


***********
*Regulon 2 *
***********

CP/CP_operons009_100.ace 1
CPn0276	4	tdk	gyrA_1	gyrB_1	dnaX_2	
CPn0301	1	lpxD	
dnaX_1	6	ybaB	dnaX_1	
lpxD	1	lpxD	
ndk	1	ndk	
ruvC	1	ndk	
thrS	3	accC1	trpS	
uvrA	3	uvrA	
yaeT	4	yaeT	lpxD	
ybaB	1	ybaB	
yciA	1	yciA	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	lpxA	fabZ	

CP/CP_operons009_100.ace 3
CPn0276	1	tdk	gyrA_1	gyrB_1	dnaX_2	
CPn0301	1	lpxD	
dnaX_1	4	ybaB	dnaX_1	
ndk	1	ndk	
ruvC	2	ndk	
thrS	5	accC1	trpS	
uvrA	3	uvrA	
yaeT	3	yaeT	lpxD	
yciA	2	yciA	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	lpxA	fabZ	

CP/CP_operons009_300.ace 2
CPn0276	4	tdk	gyrA_1	gyrB_1	dnaX_2	
CPn0277	1	tdk	gyrA_1	gyrB_1	dnaX_2	
CPn0301	2	lpxD	
CPn0622	1	ndk	
dnaX_1	5	ybaB	dnaX_1	
dppF_1	2	tdk	gyrA_1	gyrB_1	dnaX_2	
ndk	1	ndk	
recR	1	recR	
ruvC	1	ndk	
thrS	3	accC1	trpS	
uvrA	4	uvrA	
yaeT	3	yaeT	lpxD	
yciA	1	yciA	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	lpxA	fabZ	


***********
*Regulon 3 *
***********

CP/CP_operons013_300.ace 6
CPn0379	1	hemN_1	
CPn0755	5	folP	
CPn0767	1	yohI	
alaS	2	hemN_2	
ftsH	2	leuC	ftsH	
mesJ	1	mesJ	ftsH	
pssA	4	ybfP	pssA	
ydaO	1	ydaO	

CP/CP_sum_all016_300.ace 2
CPn0379	1	hemN_1	
CPn0755	4	folP	rpoD	
alaS	2	hemN_2	
ftsH	3	leuC	ftsH	
mesJ	1	mesJ	ftsH	
pssA	4	ybfP	pssA	yigN	
rpoD	1	himA	rpsA	folP	rpoD	
ydaO	1	ydaO	


***********
*Regulon 4 *
***********

CP/CP_operons016_100.ace 2
CPn0681	1	ygo4	CPn0681	
CPn0989	4	murB	
ileS	2	aq_302	ileS	
leuS	3	leuS	
pfrA	2	metG	
rnhB_1	1	metG	

CP/CP_sum_all021_100.ace 2
CPn0681	1	ygo4	CPn0681	
CPn0989	6	murB	
ileS	1	aq_302	ileS	
leuS	2	leuS	
pfrA	3	metG	
rl19	1	metG	
rnhB_1	1	metG	
valS	1	maf	valS	


***********
*Regulon 5 *
***********

CP/CP_operons007_300.ace 1
gcp_1	3	pdhA/pdhB	
aaaT	1	aaaT	
lpdA	1	lpdA	
pdhA	3	pdhC	pdhA	pdhB	
ribC	1	sucB_2	gltT	
sucA	3	sucB_1	sucA	
tctD	3	ispA	
tktB_1	3	tktB_1	
xseA	2	tktB_2	xseA	
ycaH	2	sucB_2	gltT	

CP/CP_sum_all006_300.ace 1
gcp_1	3	pdhA/pdhB	
aaaT	1	aaaT	
lpdA	1	lpdA	
pdhA	3	pdhC	pdhA	pdhB	
ribC	1	sucB_2	gltT	
sucA	2	sucB_1	sucA	
tctD	3	ispA	
tktB_1	3	tktB_1	
xseA	2	tktB_2	xseA	
ycaH	2	sucB_2	gltT	


***********
*Regulon 6 *
***********

CP/CP_operons012_300.ace 2
CPn0507	1	ubiE	tlyC_2	
CPn0513	2	ubiE	
CPn0713	3	yscC	
CPn0814	2	gspD	gspE	gspF	
mutL	4	pyrF	ndk	gspD	gspE	gspF	
proS	3	proS	ubiE	tlyC_2	
rsbV_1	1	ubiE	

CP/CP_operons012_300.ace 4
CPn0507	2	ubiE	tlyC_2	
CPn0713	1	yscC	
CPn0814	3	gspD	gspE	gspF	
dcd	2	tlyC_1	CPn0395	
mutL	3	pyrF	ndk	gspD	gspE	gspF	
proS	4	proS	ubiE	tlyC_2	
vacB	2	ubiE	tlyC_2	


***********
*Regulon 7 *
***********

CP/CP_sum_all002_300.ace 5
CPn0713	2	yscN	
CPn0717	1	CPn0720	
CPn0720	2	CPn0720	
atpE	3	valS	atpA	atpB	atpD	atpI	atpK	
gyrB_2	1	gyrB_2	gyrA_2	CPn0720	
pgsA_1	1	rho	
rpsD	1	rpoA	rplQ	rpsD	dmsB2	
sfhB	1	CPn0720	
yscJ	3	yscS	yscR	yscL	
yscU	1	yscU	lcrD	

CP/CP_sum_all002_300.ace 7
CPn0713	3	yscN	
CPn0717	1	CPn0720	
CPn0720	2	CPn0720	
atpE	3	valS	atpA	atpB	atpD	atpI	atpK	
atpK	1	valS	atpK	
flhA	1	minD1	flhA	flhF	cheA	rpsD	
fliF	3	fliF	cheA	CPn0856	fliI	
gyrB_2	1	gyrB_2	gyrA_2	CPn0720	
pgsA_1	1	rho	
rpsD	1	rpoA	rplQ	rpsD	dmsB2	
sfhB	1	CPn0720	
yscJ	1	yscS	yscR	yscL	
yscU	2	yscU	lcrD	


***********
*Regulon 8 *
***********

CP/CP_operons006_300.ace 3
CPn0276	1	tdk	gyrA_1	gyrB_1	
CPn0277	1	tdk	gyrA_1	gyrB_1	
CPn1054	3	kgsA	
CPn1055	1	kgsA	
CPn1057	1	kgsA	
CPn1058	2	kgsA	
dnaN	3	dnaN	
dppF_1	1	tdk	gyrA_1	gyrB_1	
tigA	1	yphC	
yabD	1	gcaD	yabD	
yaeS	1	yaeS	cdsA	cmk	
yagE	1	yidD	
yidD	1	yidD	

CP/CP_operons006_300.ace 4
CPn0276	1	tdk	gyrA_1	gyrB_1	
CPn0277	3	tdk	gyrA_1	gyrB_1	
CPn1054	3	kgsA	
CPn1055	1	kgsA	
CPn1057	1	kgsA	
CPn1058	2	kgsA	
clpP_2	1	yphC	
dnaA_2	1	dnaA_2	
dnaN	1	dnaN	
dppF_1	1	tdk	gyrA_1	gyrB_1	
gyrB_2	1	gyrB_2	gyrA_2	
tigA	1	yphC	
yabD	3	gcaD	yabD	
yaeS	3	yaeS	cdsA	cmk	
yagE	2	yidD	


***********
*Regulon 9 *
***********

CP/CP_operons001_300.ace 1
CPn0577	2	truA	
CPn0648	1	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	
CPn1010	1	map	
CPn1011	1	map	
infA	3	rpoA	rpsK	rpsM	rplQ	infA	rpsD	dmsB2	tufA	nusG	rl11	rl1	rl7	rpoB	rpoC	rl10	
mrsA	1	dut	
nusA	2	mtr	nusA	rbfA	truB	ribF	infB	
rl3	5	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	
rpoB	1	rpoB	rpoC	
rs1	3	rs1	rbfA	truB	ribF	nusA	infB	
rs12	1	rs10	fusA	rs7	rs12	
rs15	3	pnp	rs15	
rs4	1	rs4	
yaeI	1	truA	
yciA	1	yciA	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	

CP/CP_operons001_100.ace 3
CPn1010	1	map	
adk	3	adk	
infA	1	rpoA	rpsK	rpsM	rplQ	infA	rpsD	dmsB2	tufA	nusG	rl11	rl1	rl7	rpoB	rpoC	rl10	
nusA	1	mtr	nusA	rbfA	truB	ribF	infB	
rl3	5	rl17	rpoA	rs11	rs13	secY	rs5	rl5	rl14	rl6	rs3	rs19	rl2	rl16	rl4	rs8	rs17	rl3	rl18	rl15	rl24	rl22	rl23	
rpoB	2	rpoB	rpoC	
rs1	4	rs1	rbfA	truB	ribF	nusA	infB	
rs12	1	rs10	fusA	rs7	rs12	
rs15	2	pnp	rs15	
rs4	2	rs4	
truB	1	mtr	truB	ribF	


***********
*Regulon 10 *
***********

CP/CP_sum_all033_100.ace 3
atoC	5	atoC	
rbsU	3	rbsU	
tctD	4	tctD	


***********
*Regulon 11 *
***********

CP/CP_profile005_100.ace 2
acpP	1	ptsG	acpP	fabF	
kdsB	3	zwf	
pcnB_2	3	pcnB_2	
rs1	1	rs1	rbfA	truB	ribF	nusA	infB	
zwf	2	edd	zwf	


***********
*Regulon 12 *
***********

CP/CP_profile002_300.ace 1
CPn0026	2	yjjK	
CPn0622	1	ndk	
atsA	2	yjjK	
kdsA	3	yhbG	
kdsB	4	pyrG	
lon	2	yjjK	
ndk	1	ndk	
rs15	2	pnp	
ruvC	2	ndk	
thdF	1	thdF	nth	
xerC	1	yjjK	
yaeS	1	yaeS	argS	


***********
*Regulon 13 *
***********

CP/CP_profile007_300.ace 4
CPn0142	1	yqgE	
exbB	1	tolB	
pgm	2	tyrP_2	
tyrP_1	2	tyrP_2	
tyrP_2	2	tyrP_2	
yxjG_1	2	yqgE	


***********
*Regulon 14 *
***********

CP/CP_operons036_300.ace 1
clpP_2	1	yphC	pcnB_1	
euo	7	gltX	
gltX	2	gltX	
pcnB_2	2	pcnB_2	
ribC	4	galF	ycaH	
tigA	1	yphC	pcnB_1	
ycaH	4	ycaH	


***********
*Regulon 15 *
***********

CP/CP_operons027_100.ace 3
CPn0525	5	CPn0525	
dnaG	5	himA	rpsA	dnaG	
rl13	4	rs9	rl13	
rpoD	2	himA	rpsA	folP	rpoD	


***********
*Regulon 16 *
***********

CP/CP_profile009_300.ace 5
CPn0294	2	CPn0294	
CPn0489	5	CPn0489	
CPn0577	3	truA	CPn0577	
fliF	2	fliF	cheA	CPn0856	
pgmA	1	yfhO_2	CPn0861	CPn0856	


***********
*Regulon 17 *
***********

CP/CP_sum_all010_300.ace 4
amn	1	amn	
dsbD	3	dsbD	
mrsA	4	dut	ptsN_1	ptsN_2	
pgm	1	tyrP_2	tyrP_1	
rl28	2	rl28	
sodM	1	dut	ptsN_1	ptsN_2	
tyrP_1	1	tyrP_2	tyrP_1	
tyrP_2	1	tyrP_2	
yscU	2	yscU	lcrD	rl28	


***********
*Regulon 18 *
***********

CP/CP_sum_all009_300.ace 1
murF	1	murF	murC/ddlA	mraY	murD	ftsW	murG	
CPn0840	1	secA_2	
murE	1	murE	
pbp2	6	pbp2	
psdD	4	secA_2	
secA_2	1	secA_2	
yabC_2	1	pbp3	yabC_2	


***********
*Regulon 19 *
***********

CP/CP_operons006_300.ace 8
60IM	1	dnaA_1	60IM	
CPn1054	1	kgsA	
CPn1057	1	kgsA	
CPn1058	1	kgsA	
dnaA_2	2	dnaA_2	
dnaN	2	dnaN	
gyrB_2	2	gyrB_2	gyrA_2	
tigA	4	yphC	
yabD	2	gcaD	yabD	
yaeS	1	yaeS	cdsA	cmk	
yagE	1	yidD	
yidD	1	yidD