*********** *Regulon 1 * *********** MP/MP_operons004_100.ace 1 dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB gryB 1 gryB gyrA thymidylate yabD holB parB 1 parC parB rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 7 cysA dnaA MP/MP_operons004_300.ace 1 DnaJ 2 parC parB dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB gryB 1 gryB gyrA thymidylate yabD holB parB 1 parC parB rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 7 cysA dnaA MP/MP_operons004_300.ace 3 DnaJ 1 parC parB G12_orf140b 1 ruvB dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB gryB 1 gryB gyrA thymidylate yabD holB rpsO 2 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 4 cysA dnaA MP/MP_sum_all005_100.ace 1 dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 gryB 1 gryB gyrA thymidylate yabD holB thdF parB 1 parC parB rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 7 cysA dnaA ksgA gltX MG461 MP/MP_sum_all005_100.ace 3 G12_orf140b 5 ruvB dnaN 2 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 gryB 1 gryB gyrA thymidylate yabD holB thdF parB 1 parC parB rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 4 cysA dnaA ksgA gltX MG461 MP/MP_sum_all005_300.ace 1 DnaJ 2 parC parB grpE DnaJ dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 gryB 1 gryB gyrA thymidylate yabD holB thdF parB 1 parC parB rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 7 cysA dnaA ksgA gltX MG461 MP/MP_sum_all005_100.ace 4 G12_orf140b 2 ruvB dnaN 2 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 gryB 1 gryB gyrA thymidylate yabD holB thdF rpsO 3 phpA rpsO jhp0390 flhF rplM rpsI dnaX soj 4 cysA dnaA ksgA gltX MG461 *********** *Regulon 2 * *********** MP/MP_sum_all009_100.ace 2 MG412 1 pstB VXpSPT7_orf112 1 cysA map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 cbiO 2 cbiO MG302 lcnDR3 2 obg outB spg lcnDR3 oppB 3 oppF rplA rplK rpsG rpsL fus pth pmd1 2 msbA pmd1 yyaF metS dnaJ soj 4 cysA dnaA ksgA gltX MG461 MP/MP_sum_all027_300.ace 4 cbiO 3 cbiO MG302 artP dnaK 1 ubiE tlyC_2 cbiO MG302 dnaK artP hlyC 1 cysA map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP infB 1 infB ribF truB rbfA cysA yaaC map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP oppB 1 oppF rplA rplK rpsG rpsL fus pth oppD putative 9 umpS cysA cbiO map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 dnaK deaD ugpC hisP artP soj 5 cysA dnaA ksgA gltX MG461 soj devA MP/MP_sum_all027_300.ace 5 MG148 2 cysA map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP VXpSPT7_orf112 3 cysA map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP cbiO 1 cbiO MG302 artP dnaK 1 ubiE tlyC_2 cbiO MG302 dnaK artP infB 1 infB ribF truB rbfA cysA yaaC map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP oppB 2 oppF rplA rplK rpsG rpsL fus pth oppD putative 7 umpS cysA cbiO map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 dnaK deaD ugpC hisP artP soj 5 cysA dnaA ksgA gltX MG461 soj devA MP/MP_sum_all027_300.ace 6 MG148 1 map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP VXpSPT7_orf112 2 map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP cbiO 1 MG302 artP dnaK 1 CT398 MG302 artP infB 2 mtr infB rbfA truB ribF jhp0379 yaaC map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 hisP oppB 2 rplA rplK rpsG rpsL fus pth oppD putative 7 serA jhp1271 map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 ugpC hisP artP soj 1 devA *********** *Regulon 3 * *********** MP/MP_operons012_100.ace 4 DnaJ 3 parC parB grpE DnaJ dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 grpE 1 ubiE tlyC_2 parC parB grpE pmd1 1 msbA pmd1 yyaF metS dnaJ putative 4 umpS cysA cbiO map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 dnaK yqxE 1 yqxE MP/MP_operons012_300.ace 4 DnaJ 3 parC parB grpE DnaJ dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 grpE 1 ubiE tlyC_2 parC parB grpE pmd1 1 msbA pmd1 yyaF metS dnaJ putative 4 umpS cysA cbiO map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 dnaK yqxE 1 yqxE MP/MP_sum_all017_300.ace 4 DnaJ 3 parC parB grpE DnaJ dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF xdj1 grpE 1 ubiE tlyC_2 parC parB grpE pmd1 1 msbA pmd1 yyaF metS dnaJ putative 4 umpS cysA cbiO map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 dnaK yqxE 1 yqxE *********** *Regulon 4 * *********** MP/MP_operons009_100.ace 1 apt 3 jhp0516 pepA apt nox pdhA pdhB pdhC 5 pdhC pdhD spoT 3 amiA spoT MP/MP_sum_all012_300.ace 1 apt 3 jhp0516 pepA apt nox pdhA pdhB pdhC 5 pdhC pdhD spoT_MG277 3 amiA spoT apt nox pdhA pdhB *********** *Regulon 5 * *********** MP/MP_operons001_300.ace 5 MG313 1 rpsD MG319 1 rpsD MG328 3 pepX MG342 3 rpoB rpoC VXpSPT7_orf112 1 map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG181 ackA 2 ytkK ytkL clpB cbiO 1 MG302 clpB 3 clpB oppB 1 rplA rplK rpsG rpsL fus putative 4 serA jhp1271 map rplQ rpoA rpsK rpsM secY rpsE rplF rplE rplN rpsH rpsC rpS19 rplB rplC rplP rplD ribosomal rpsQ rplO rpsJ rplX rpsN rpmJ adk infA rplW hisT MG302 MG181 rpsJ 2 rplB rpsS rpsC rplC rplD rplP rpsQ rplV rpsJ rplW map rplE rplN rpsE rplF rpsH secY rplQ rpoA rpsK rpsM rplO rplX rplR rpsN infA rpsD rplL rpS19 ribosomal rpmJ adk hisT MG181 rpsO 1 mtr phpA rpsO jhp0390 flhF rplM rpsI *********** *Regulon 6 * *********** MP/MP_sum_all003_300.ace 5 dnaJ 1 pdhA/B yyaF metS MG388 1 MG384 MG383 obg outB P200 1 obg outB adh 4 obg outB groES 2 obg nonspecified outB ileS 1 aq_302 ileS fliQ fliI nrdE 1 rpl27 rpl21 obg 1 obg outB pmd1_mtd1 1 yyaF metS mtd1 thyA 2 rpl27 rpl21 *********** *Regulon 7 * *********** MP/MP_sum_all019_300.ace 2 MG377 1 thrSv deaD_rpsO 2 deaD phpA rpsO jhp0390 flhF rplM rpsI dnaX uvrA rpsB 5 uvrB soj 4 cysA dnaA ksgA gltX MG461 soj *********** *Regulon 8 * *********** MP/MP_operons006_300.ace 2 D02_orf128 2 obg nonspecified outB spg dnaN 4 recF dnaN gyrB gryB gyrA thymidylate yabD holB thdF groES 2 obg nonspecified outB spg lcnDR3 1 obg outB spg soj 9 cysA dnaA ksgA gltX MG461 yihA 1 valS yihA cmk *********** *Regulon 9 * *********** MP/MP_fusions007_100.ace 2 VXpSPT7_orf112 1 cysA cbiO 1 cbiO oppB 2 oppF pmd1 2 msbA pmd1 soj 5 cysA *********** *Regulon 10 * *********** MP/MP_operons002_300.ace 7 D02_orf128 2 obg nonspecified outB H03_orf152 1 obg outB MG269 1 leuS lcnDR3 1 obg outB obg 1 obg outB oppB 2 oppF rplA rplK rpsG rpsL fus pth pmd1_mtd1 1 msbA pmd1 yyaF metS mtd1 rpl21 1 rpl27 rpl21 thyA 5 rpl27 rpl21 yihA 2 valS *********** *Regulon 11 * *********** MP/MP_fusions007_100.ace 1 MG412 6 pstB VXpSPT7_orf112 3 cysA oppB 1 oppF soj 4 cysA