Bnumber Name 0 2.5 5 10 20 TP used Low Est. Half Life RNA Type Length F. Category Annotation b4188 yjfN 8782 744 67 -41 -270 0 and 2.5 0 0.8 CDS 303 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3605 lldD 7031 770 1424 221 -109 0 and 2.5 0 0.9 CDS 1191 Energy metabolism L-lactate dehydrogenase b3914 - 10398 1812 3530 997 -11 0 and 2.5 1 CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0990 cspG 6302 1324 935 389 105 0 and 2.5 1.1 CDS 213 "Cell processes (incl. adaptation, protection)" homolog of Salmonella cold shock protein b3913 - 10811 2352 3506 790 27 0 and 2.5 1.1 CDS 150 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0553 nmpC 4704 1147 742 187 -183 0 and 2.5 1.2 CDS 1128 "phage, transposon, or plasmid" outer membrane porin protein; locus of qsr prophage b2398 yfeC 5062 1218 614 122 -107 0 and 2.5 1.2 CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3494 yhiO 4330 870 366 -33 -191 0 and 2.5 0 1.2 CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3556 cspA 20403 4696 3056 1556 100 0 and 2.5 1.2 CDS 213 "Cell processes (incl. adaptation, protection)" "cold shock protein 7.4, transcriptional activator of hns" b3685 yidE 4373 651 722 202 -150 0 and 2.5 0 1.2 CDS 1686 Putative transport proteins putative transport protein b0726 sucA 4699 1236 1001 701 -161 0 and 2.5 1.3 CDS 2802 Energy metabolism 2-oxoglutarate dehydrogenase (decarboxylase component) b1205 ychH 11630 2964 692 67 -171 0 and 2.5 1.3 CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3362 yhfG 3959 884 1014 556 -114 0 and 2.5 0 1.3 CDS 168 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0162 yaeG 3366 859 473 105 520 0 and 2.5 0 1.4 CDS 1176 Putative regulatory proteins "orf, hypothetical protein" b1060 yceP 11780 3294 5286 1886 1374 0 and 2.5 1.4 CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2080 - 5355 1567 2914 1769 922 0 and 2.5 1.4 CDS 372 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2377 - 6525 1880 1189 944 53 0 and 2.5 1.4 CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3361 fic 6270 1888 2035 1267 39 0 and 2.5 1.4 CDS 603 "Cell processes (incl. adaptation, protection)" "induced in stationary phase, recognized by rpoS, affects cell division" b4132 cadB 6923 2019 3046 2287 238 0 and 2.5 1.4 CDS 1335 Transport and binding proteins transport of lysine/cadaverine b4396 rob 4685 1339 734 -32 -322 0 and 2.5 1.4 CDS 870 "DNA replication, recombination, modification and repair" right origin-binding protein b0119 yacL 5626 1705 1762 884 104 0 and 2.5 1.5 CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0226 dinJ 7065 2233 2052 965 -108 0 and 2.5 1.5 CDS 261 Other known genes damage-inducible protein J b0677 nagA 6389 2038 1342 564 -181 0 and 2.5 1.5 CDS 1149 Central intermediary metabolism N-acetylglucosamine-6-phosphate deacetylase b0866 - 5304 1654 1443 486 -175 0 and 2.5 1.5 CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2399 yfeD 6228 1894 1102 297 -119 0 and 2.5 1.5 CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4189 yjfO 14055 4352 1298 546 34 0 and 2.5 1.5 CDS 429 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0003 thrB 2993 778 1263 959 16 0 and 2.5 0 1.6 CDS 933 Amino acid biosynthesis and metabolism homoserine kinase b1902 yecI 3308 1111 1158 266 -170 0 and 2.5 1.6 CDS 504 "Hypothetical, unclassified, unknown" ferritin-like protein b2341 - 3192 1075 520 147 -536 0 and 2.5 1.6 CDS 2145 Fatty acid and phospholipid metabolism putative enzyme b3782 rhoL 9684 3261 1659 910 -3 0 and 2.5 1.6 CDS 102 "Transcription, RNA processing and degradation" rho operon leader peptide b4217 ytfK 2942 969 1353 397 -60 0 and 2.5 0 1.6 CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4383 deoB 3399 1184 2113 2023 1389 0 and 2.5 1.6 CDS 1224 Nucleotide biosynthesis and metabolism phosphopentomutase b0485 ybaS 3593 1259 1029 608 6 0 and 2.5 1.7 CDS 933 Putative enzymes putative glutaminase b0565 ompT 11735 4118 5219 3509 548 0 and 2.5 1.7 CDS 954 Cell structure "outer membrane protein 3b (a), protease VII" b1557 cspB 2865 27 -111 -212 -118 0 and 2.5 0 1.7 CDS 216 "Cell processes (incl. adaptation, protection)" cold shock protein; may affect transcription b1564 relB 2863 757 1480 875 226 0 and 2.5 0 1.7 CDS 240 Regulatory function negative regulator of translation b2535 csiE 2845 524 -28 -294 -302 0 and 2.5 0 1.7 CDS 1302 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3068 ygjF 3472 1253 1454 250 -258 0 and 2.5 1.7 CDS 507 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3506 slp 4923 1784 2423 1417 579 0 and 2.5 1.7 CDS 600 Cell structure outer membrane protein induced after carbon starvation b4149 blc 6510 2411 2161 952 208 0 and 2.5 1.7 CDS 534 Membrane proteins outer membrane lipoprotein (lipocalin) b0081 yabB 7891 3062 2792 1282 55 0 and 2.5 1.8 CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0678 nagB 9163 3455 2777 1011 -211 0 and 2.5 1.8 CDS 801 Central intermediary metabolism glucosamine-6-phosphate deaminase b0727 sucB 21237 8312 5384 4435 833 0 and 2.5 1.8 CDS 1218 Energy metabolism 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) b0814 ompX 8748 3308 2347 779 118 0 and 2.5 1.8 CDS 516 Cell structure outer membrane protein X b0966 yccV 2863 1090 1009 297 -119 0 and 2.5 1.8 CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1188 ycgB 4356 1666 1288 1112 70 0 and 2.5 1.8 CDS 1533 "Hypothetical, unclassified, unknown" putative sporulation protein b1197 treA 5060 1914 1541 823 344 0 and 2.5 1.8 CDS 1698 "Cell processes (incl. adaptation, protection)" "trehalase, periplasmic" b1848 yebG 3527 1359 884 208 -299 0 and 2.5 1.8 CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3223 yhcJ 4613 1802 2005 1289 391 0 and 2.5 1.8 CDS 690 Putative enzymes putative enzyme b0344 lacZ 2473 741 341 327 -284 0 and 2.5 0 1.9 CDS 3075 Carbon compound catabolism beta-D-galactosidase b0361 yi22_1 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b0382 yaiB 5608 2289 1977 1002 -74 0 and 2.5 1.9 CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0384 psiF 3275 1331 1457 1034 66 0 and 2.5 1.9 CDS 339 Central intermediary metabolism induced by phosphate starvation b0925 ycbB 4473 1821 1445 603 -15 0 and 2.5 1.9 CDS 1848 Putative enzymes putative amidase b1356 ydaR 2489 403 179 41 -125 0 and 2.5 0 1.9 CDS 477 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1402 yi22_2 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b1583 - 8573 3516 3789 1752 -334 0 and 2.5 1.9 CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1646 sodC 6430 2533 2925 1566 289 0 and 2.5 1.9 CDS 522 "Cell processes (incl. adaptation, protection)" superoxide dismutase precursor (Cu-Zn) b1992 cobS 3084 1257 1308 771 105 0 and 2.5 1.9 CDS 744 "Biosynthesis of cofactors, prosthetic groups and carriers" cobalamin 5'-phosphate synthase b1996 yi22_3 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b2259 pmrD 4618 1822 1389 1314 268 0 and 2.5 1.9 CDS 297 "Cell processes (incl. adaptation, protection)" polymyxin resistance protein B b2580 ung 3389 1376 1379 1011 164 0 and 2.5 1.9 CDS 690 "DNA replication, recombination, modification and repair" uracil-DNA-glycosylase b2662 gabT 2554 1036 1257 955 158 0 and 2.5 1.9 CDS 1281 Central intermediary metabolism 4-aminobutyrate aminotransferase activity b2860 yi22_4 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b3003 yghA 4032 1616 2017 2322 846 0 and 2.5 1.9 CDS 885 Putative enzymes putative oxidoreductase b3045 yi22_5 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b3093 exuT 2674 1097 795 230 -18 0 and 2.5 1.9 CDS 1419 Transport and binding proteins transport of hexuronates b3448 yhhA 2576 705 782 332 -244 0 and 2.5 0 1.9 CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4131 cadA 5612 2245 4376 2992 1032 0 and 2.5 1.9 CDS 2148 Amino acid biosynthesis and metabolism lysine decarboxylase 1 b4143 mopA 4401 1762 1821 1430 541 0 and 2.5 1.9 CDS 1647 "Cell processes (incl. adaptation, protection)" "GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein" b4273 yi22_6 3370 1345 2160 1691 488 0 and 2.5 1.9 CDS 906 IS2 hypothetical protein b4384 deoD 4982 1986 4159 2748 1249 0 and 2.5 1.9 CDS 720 Nucleotide biosynthesis and metabolism purine-nucleoside phosphorylase b0394 yajF 3502 1497 1487 944 101 0 and 2.5 2 CDS 1047 "Hypothetical, unclassified, unknown" possible NAGC-like transcriptional regulator b0864 artP 5722 2432 2864 1286 98 0 and 2.5 2 CDS 729 Transport and binding proteins ATP-binding component of 3rd arginine transport system b1482 osmC 8659 3666 5899 4095 2148 0 and 2.5 2 CDS 432 "Cell processes (incl. adaptation, protection)" osmotically inducible protein b1765 ydjA 6412 2695 2519 1254 -109 0 and 2.5 2 CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2369 evgA 2797 1184 420 136 -164 0 and 2.5 2 CDS 615 "Transcription, RNA processing and degradation" putative positive transcription regulator (sensor EvgS) b2789 - 7375 3078 2441 1274 350 0 and 2.5 2 CDS 1353 Carbon compound catabolism putative transport protein b2830 ygdP 8926 3795 1476 772 -148 0 and 2.5 2 CDS 531 "Cell processes (incl. adaptation, protection)" putative invasion protein b3129 sohA 8243 3494 2659 1329 127 0 and 2.5 2 CDS 336 "Translation, post-translational modification" putative protease; htrA suppressor protein b3207 yrbL 4961 2114 1911 982 51 0 and 2.5 2 CDS 633 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3285 smf_2 13083 5521 3854 1882 102 0 and 2.5 2 CDS 309 "Hypothetical, unclassified, unknown" "orf, fragment 2" b4039 ubiC 3739 1558 1461 1061 160 0 and 2.5 2 CDS 609 "Biosynthesis of cofactors, prosthetic groups and carriers" chorismate lyase b0458 ylaC 2417 1077 784 566 -49 0 and 2.5 2.1 CDS 510 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0462 acrB 2948 1274 1291 1161 269 0 and 2.5 2.1 CDS 3150 "Cell processes (incl. adaptation, protection)" acridine efflux pump b0839 dacC 3491 1512 1621 514 -47 0 and 2.5 2.1 CDS 1203 Cell structure D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6 b1725 - 7488 3306 2300 1845 81 0 and 2.5 2.1 CDS 861 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2035 wbbH 2285 955 611 1273 68 0 and 2.5 0 2.1 CDS 1167 Cell structure O-antigen polymerase b2660 ygaF 2278 949 960 386 37 0 and 2.5 0 2.1 CDS 1335 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2666 - 2293 927 1004 418 193 0 and 2.5 0 2.1 CDS 159 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2790 - 4144 1832 1987 1420 186 0 and 2.5 2.1 CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3222 yhcI 2308 872 1023 176 -363 0 and 2.5 0 2.1 CDS 909 Putative enzymes putative NAGC-like transcriptional regulator b3287 def 11676 5082 3834 1895 -73 0 and 2.5 2.1 CDS 510 "Translation, post-translational modification" peptide deformylase b3350 kefB 2321 928 797 1158 109 0 and 2.5 0 2.1 CDS 1806 Transport and binding proteins K+ efflux; NEM-activable K+/H+ antiporter b3511 hdeD 2656 1166 655 235 -24 0 and 2.5 2.1 CDS 573 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3555 yiaG 2274 689 1201 314 557 0 and 2.5 0 2.1 CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3599 mtlA 3563 1557 1203 757 -130 0 and 2.5 2.1 CDS 1914 Transport and binding proteins "PTS system, mannitol-specific enzyme IIABC components" b3940 metL 2281 923 914 1288 360 0 and 2.5 0 2.1 CDS 2433 Amino acid biosynthesis and metabolism aspartokinase II and homoserine dehydrogenase II b4234 yjgA 2347 501 1226 1370 363 0 and 2.5 0 2.1 CDS 552 Structural proteins putative alpha helix protein b0722 sdhD 4227 1915 1443 711 -83 0 and 2.5 2.2 CDS 348 Energy metabolism "succinate dehydrogenase, hydrophobic subunit" b0723 sdhA 5350 2412 2161 1705 277 0 and 2.5 2.2 CDS 1767 Energy metabolism "succinate dehydrogenase, flavoprotein subunit" b0850 ybjC 2233 900 482 134 -220 0 and 2.5 0 2.2 CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1000 cbpA 9175 4215 4376 2519 279 0 and 2.5 2.2 CDS 921 "Cell processes (incl. adaptation, protection)" curved DNA-binding protein; functions closely related to DnaJ b1221 narL 2214 722 947 707 204 0 and 2.5 0 2.2 CDS 651 Energy metabolism "pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes" b1415 aldA 2597 1176 1077 1261 118 0 and 2.5 2.2 CDS 1440 Energy metabolism "aldehyde dehydrogenase, NAD-linked" b1584 speG 4405 2003 2090 1305 66 0 and 2.5 2.2 CDS 561 Central intermediary metabolism spermidine N1-acetyltransferase b1678 ynhG 6238 2828 3852 2280 262 0 and 2.5 2.2 CDS 1005 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1920 fliY 8439 3787 4551 2980 1006 0 and 2.5 2.2 CDS 801 "Cell processes (incl. adaptation, protection)" putative periplasmic binding transport protein b2475 - 2233 986 1237 1072 756 0 and 2.5 0 2.2 CDS 864 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2564 pdxJ 5445 2507 3531 2478 367 0 and 2.5 2.2 CDS 732 "Biosynthesis of cofactors, prosthetic groups and carriers" pyridoxine biosynthesis b3175 secG 6760 3126 4185 1320 -51 0 and 2.5 2.2 CDS 333 Transport and binding proteins protein export - membrane protein b3225 nanA 8409 3772 3783 1988 641 0 and 2.5 2.2 CDS 894 Cell structure N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12? b3314 rpsC 5884 2717 2063 4280 1230 0 and 2.5 2.2 CDS 702 "Translation, post-translational modification" 30S ribosomal subunit protein S3 b3461 rpoH 2986 1377 1535 1149 200 0 and 2.5 2.2 CDS 855 "Transcription, RNA processing and degradation" "RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures" b3600 mtlD 3381 1544 1522 747 -44 0 and 2.5 2.2 CDS 1149 Carbon compound catabolism mannitol-1-phosphate dehydrogenase b3748 rbsD 13398 6120 5940 2658 1175 0 and 2.5 2.2 CDS 456 Transport and binding proteins D-ribose high-affinity transport system; membrane-associated protein b4056 yjbQ 3567 1616 1077 874 92 0 and 2.5 2.2 CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4057 yjbR 4300 1939 1631 1848 378 0 and 2.5 2.2 CDS 357 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0238 gpt 2192 1032 2070 759 39 0 and 2.5 2.3 CDS 459 Nucleotide biosynthesis and metabolism guanine-hypoxanthine phosphoribosyltransferase b0422 xseB 5165 2421 2549 1437 214 0 and 2.5 2.3 CDS 243 "Transcription, RNA processing and degradation" "exonuclease VII, small subunit" b0699 ybfA 2181 648 811 390 75 0 and 2.5 0 2.3 CDS 207 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0777 bioC 2132 919 785 1176 449 0 and 2.5 0 2.3 CDS 756 "Biosynthesis of cofactors, prosthetic groups and carriers" biotin biosynthesis; reaction prior to pimeloyl CoA b1254 yciB 3143 1489 1180 932 60 0 and 2.5 2.3 CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1667 - 5938 2804 4231 2701 2068 0 and 2.5 2.3 CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1738 celA 7597 3602 2816 1632 -95 0 and 2.5 2.3 CDS 321 Transport and binding proteins "PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin" b2009 sbmC 8417 3931 3246 3031 569 0 and 2.5 2.3 CDS 474 Other known genes SbmC protein b2426 ucpA 11852 5664 4222 1335 -180 0 and 2.5 2.3 CDS 858 Putative enzymes putative oxidoreductase b2479 gcvR 3441 1642 1158 464 -66 0 and 2.5 2.3 CDS 639 Central intermediary metabolism transcriptional regulation of gcv operon b2661 gabD 2136 664 695 91 -147 0 and 2.5 0 2.3 CDS 1449 Central intermediary metabolism "succinate-semialdehyde dehydrogenase, NADP-dependent activity" b2745 ygbO 4185 1940 1283 479 -192 0 and 2.5 2.3 CDS 1050 "Hypothetical, unclassified, unknown" putative hydrogenase subunit b2800 fucA 5356 2560 2663 2508 527 0 and 2.5 2.3 CDS 648 Carbon compound catabolism L-fuculose-1-phosphate aldolase b2894 xerD 3247 1538 1416 707 -3 0 and 2.5 2.3 CDS 897 "DNA replication, recombination, modification and repair" site-specific recombinase b2999 - 2163 789 1012 1283 467 0 and 2.5 0 2.3 CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3253 yhdH 3021 1445 1426 689 -111 0 and 2.5 2.3 CDS 975 Putative enzymes putative dehydrogenase b3313 rplP 7156 3319 2573 6604 1650 0 and 2.5 2.3 CDS 411 "Translation, post-translational modification" 50S ribosomal subunit protein L16 b3336 bfr 8930 4238 6087 3589 3112 0 and 2.5 2.3 CDS 477 Transport and binding proteins "bacterioferrin, an iron storage homoprotein" b3516 yhiX 2156 572 362 -27 -73 0 and 2.5 0 2.3 CDS 825 Putative regulatory proteins putative ARAC-type regulatory protein b3612 yibO 3158 1474 1427 784 -63 0 and 2.5 2.3 CDS 1545 "Hypothetical, unclassified, unknown" "putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase" b3739 atpI 5750 2748 2831 1436 32 0 and 2.5 2.3 CDS 393 Energy metabolism "membrane-bound ATP synthase, dispensable protein, affects expression of atpB" b3805 hemC 4056 1929 1548 853 7 0 and 2.5 2.3 CDS 963 "Biosynthesis of cofactors, prosthetic groups and carriers" porphobilinogen deaminase = hydroxymethylbilane synthase b0598 cstA 10093 4921 4427 2079 107 0 and 2.5 2.4 CDS 2106 "Hypothetical, unclassified, unknown" carbon starvation protein b0757 galK 7653 3758 3833 2412 135 0 and 2.5 2.4 CDS 1149 Carbon compound catabolism galactokinase b0800 ybiB 4652 2234 3084 2339 399 0 and 2.5 2.4 CDS 963 Putative enzymes putative enzyme b0906 ycaP 2094 838 714 491 -80 0 and 2.5 0 2.4 CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1266 yciV 6762 3298 3727 2341 879 0 and 2.5 2.4 CDS 882 Putative enzymes putative enzymes b1820 - 942 2022 888 664 -112 2.5 and 5 0 2.4 CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1897 otsB 2759 1346 1082 654 -78 0 and 2.5 2.4 CDS 801 "Cell processes (incl. adaptation, protection)" "trehalose-6-phosphate phophatase, biosynthetic" b2303 folX 3033 1487 1259 754 65 0 and 2.5 2.4 CDS 363 "Biosynthesis of cofactors, prosthetic groups and carriers" "D-erythro-7,8-dihydroneopterin tri P epimerase" b2304 - 2638 1295 1104 873 177 0 and 2.5 2.4 CDS 894 Putative enzymes putative sugar nucleotide epimerase b2521 sseA 10277 4984 4868 3215 334 0 and 2.5 2.4 CDS 1005 Central intermediary metabolism putative thiosulfate sulfurtransferase b2910 ygfE 7365 3597 3351 1568 85 0 and 2.5 2.4 CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2922 yggE 4846 2341 2591 1318 161 0 and 2.5 2.4 CDS 741 Structural proteins putative actin b3672 ivbL 2119 975 796 2 -213 0 and 2.5 0 2.4 CDS 99 "Hypothetical, unclassified, unknown" ilvB operon leader peptide b4135 yjdC 3312 1587 1631 1004 451 0 and 2.5 2.4 CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0101 yacG 2018 601 850 198 -131 0 and 2.5 0 2.5 CDS 198 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0891 lolA 8537 4258 5802 4301 467 0 and 2.5 2.5 CDS 615 Transport and binding proteins periplasmic protein effects translocation of lipoproteins from inner membrane to outer b1177 ycgJ 2051 774 969 805 261 0 and 2.5 0 2.5 CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1272 sohB 2994 1489 1760 1417 -66 0 and 2.5 2.5 CDS 1050 "Translation, post-translational modification" putative protease b1449 yncB 2024 890 1449 619 71 0 and 2.5 0 2.5 CDS 1131 Putative enzymes putative oxidoreductase b2428 yfeU 2054 962 691 500 -116 0 and 2.5 0 2.5 CDS 897 Putative regulatory proteins putative regulator b2532 - 3159 1565 938 -252 -532 0 and 2.5 2.5 CDS 741 Putative enzymes putative ATP synthase beta subunit b2805 fucR 2050 858 665 224 -135 0 and 2.5 0 2.5 CDS 732 Carbon compound catabolism positive regulator of the fuc operon b2960 yggH 2584 1278 1777 603 78 0 and 2.5 2.5 CDS 720 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3942 katG 2040 552 562 719 430 0 and 2.5 0 2.5 CDS 2181 "Cell processes (incl. adaptation, protection)" catalase; hydroperoxidase HPI(I) b4055 aphA 4389 2900 1098 1396 -156 0 and 5 2.5 CDS 714 "Hypothetical, unclassified, unknown" diadenosine tetraphosphatase b0002 thrA 1982 914 864 556 118 0 and 2.5 0 2.6 CDS 2463 Amino acid biosynthesis and metabolism "aspartokinase I, homoserine dehydrogenase I" b1598 - 1979 834 813 1033 358 0 and 2.5 0 2.6 CDS 822 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0851 mdaA 1924 840 574 329 -113 0 and 2.5 0 2.7 CDS 723 "Cell processes (incl. adaptation, protection)" modulator of drug activity A b1278 pgpB 1934 903 730 684 87 0 and 2.5 0 2.7 CDS 765 Fatty acid and phospholipid metabolism "non-essential phosphatidylglycerophosphate phosphatase, membrane bound" b2031 yefJ 4469 2369 1248 1140 56 0 and 5 2.7 CDS 474 Putative enzymes putative creatinase (EC 3.5.-) b2219 atoS 1927 922 628 391 57 0 and 2.5 0 2.7 CDS 1827 Putative regulatory proteins sensor protein AtoS for response regulator AtoC b3131 agaR 1941 769 438 385 -154 0 and 2.5 0 2.7 CDS 810 Central intermediary metabolism putative DEOR-type transcriptional regulator of aga operon b0343 lacY 1903 476 283 -53 -83 0 and 2.5 0 2.8 CDS 1254 Transport and binding proteins galactoside permease (M protein) b1684 ydiC 6792 3597 1973 1143 273 0 and 5 2.8 CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3127 yhaU 12394 6487 3554 2234 95 0 and 5 2.8 CDS 1335 Carbon compound catabolism putative transport protein b1846 yebE 1846 633 677 146 -43 0 and 2.5 0 2.9 CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2017 yefM 1841 680 420 138 -110 0 and 2.5 0 2.9 CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2032 wbbK 7664 4191 2292 3139 293 0 and 5 2.9 CDS 1119 "Hypothetical, unclassified, unknown" putative glucose transferase b2065 dcd 1856 793 617 -337 -756 0 and 2.5 0 2.9 CDS 582 Nucleotide biosynthesis and metabolism 2'-deoxycytidine 5'-triphosphate deaminase b2173 yeiR 1847 439 867 888 199 0 and 2.5 0 2.9 CDS 987 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3642 pyrE 1832 812 935 1311 197 0 and 2.5 0 2.9 CDS 642 Nucleotide biosynthesis and metabolism orotate phosphoribosyltransferase b1837 - 1820 430 474 267 -40 0 and 2.5 0 3 CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2869 ygeV 5988 3276 1909 894 20 0 and 5 3 CDS 1779 Putative enzymes putative transcriptional regulator b3571 malS 1514 1741 812 330 105 2.5 and 5 0 3 CDS 2031 Carbon compound catabolism alpha-amylase b0156 yadR 1766 722 1118 475 13 0 and 2.5 0 3.1 CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1151 ymfO 1771 662 1002 1489 713 0 and 2.5 0 3.1 CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1222 narX 1768 704 894 569 -86 0 and 2.5 0 3.1 CDS 1797 Energy metabolism "nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator" b0881 yljA 6845 3487 2303 2022 -89 0 and 5 3.2 CDS 321 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1066 rimJ 7559 4128 2537 1657 16 0 and 5 3.2 CDS 585 "Translation, post-translational modification" acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 b1176 minC 7684 4485 2591 1186 -506 0 and 5 3.2 CDS 696 "Cell processes (incl. adaptation, protection)" "cell division inhibitor, inhibits ftsZ ring formation" b2033 wbbJ 2835 1683 730 1202 108 0 and 5 0 3.2 CDS 591 Putative enzymes putative O-acetyl transferase b3356 yhfA 4442 2405 1510 1387 -11 0 and 5 3.2 CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4350 hsdR 1154 1664 348 637 -376 2.5 and 5 0 3.2 CDS 3567 "Transcription, RNA processing and degradation" host restriction; endonuclease R b3318 rplW 8681 5860 2999 6584 1360 0 and 5 3.3 CDS 303 "Translation, post-translational modification" 50S ribosomal subunit protein L23 b3912 cpxR 2743 1528 826 505 -152 0 and 5 0 3.4 CDS 699 Putative regulatory proteins transcriptional regulator in 2-component system b0431 cyoB 1446 1600 600 606 -254 2.5 and 5 0 3.5 CDS 1992 Energy metabolism cytochrome o ubiquinol oxidase subunit I b1101 ptsG 7832 4662 2900 1279 234 0 and 5 3.5 CDS 1434 Transport and binding proteins "PTS system, glucose-specific IIBC component" b0054 imp 1145 1584 554 266 -85 2.5 and 5 2.5 3.6 CDS 2355 "Cell processes (incl. adaptation, protection)" organic solvent tolerance b0795 - 3391 1813 1282 558 -309 0 and 5 3.6 CDS 999 Cell structure putative membrane protein b4280 yjhC 3180 1681 1203 1386 707 0 and 5 3.6 CDS 1134 Putative enzymes putative dehydrogenase b0186 ldcC 4846 2519 1915 1458 45 0 and 5 3.7 CDS 2142 Energy metabolism "lysine decarboxylase 2, constitutive" b2909 ygfB 7225 5077 2808 1330 -132 0 and 5 3.7 CDS 585 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3163 yhbM 9016 5204 3556 2365 114 0 and 5 3.7 CDS 885 Putative regulatory proteins putative control proteins b4178 yjeB 2781 1600 1099 505 -120 0 and 5 3.7 CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1033 ycdW 3214 2209 1294 1410 195 0 and 5 3.8 CDS 978 Putative enzymes putative dehydrogenase b2946 yggJ 2378 1475 952 168 -452 0 and 5 2.5 3.9 CDS 759 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3688 yidQ 2682 1400 1106 572 85 0 and 5 3.9 CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3863 polA 2787 1836 1153 858 53 0 and 5 3.9 CDS 2787 "DNA replication, recombination, modification and repair" "DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease" b4111 proP 7047 6436 5121 1041 -43 0 and 10 2.5 3.9 CDS 1503 Transport and binding proteins low-affinity transport system; proline permease II b1294 sapA 1047 566 2848 294 -134 5 and 10 2.5 4 CDS 1644 Transport and binding proteins homolog of Salmonella peptide transport periplasmic protein b1618 uidR 3634 1841 1522 946 237 0 and 5 4 CDS 591 Putative regulatory proteins repressor for uid operon b2034 wbbI 2295 1148 554 1133 -12 0 and 5 2.5 4 CDS 993 "Hypothetical, unclassified, unknown" putative Galf transferase b3544 dppA 7332 5507 4148 1269 -188 0 and 10 4 CDS 1608 Transport and binding proteins dipeptide transport protein b0676 nagC 3592 1943 1530 847 -46 0 and 5 4.1 CDS 1221 Central intermediary metabolism transcriptional repressor of nag (N-acetylglucosamine) operon b0679 nagE 14853 8426 8594 2738 342 0 and 10 4.1 CDS 1947 Transport and binding proteins "PTS system, N-acetylglucosamine-specific enzyme IIABC" b0904 focA 12168 8751 5240 5138 342 0 and 5 4.1 CDS 858 Carbon compound catabolism probable formate transporter (formate channel 1) b1106 ycfN 4247 2505 1832 1938 451 0 and 5 4.1 CDS 825 Carbon compound catabolism putative beta-glucosidase (EC 3.2.1.21) b2016 - 2262 1271 966 292 -47 0 and 5 2.5 4.1 CDS 825 Putative enzymes putative enzyme of sugar metabolism b2323 fabB 11899 7015 5079 3038 349 0 and 5 4.1 CDS 1221 Fatty acid and phospholipid metabolism 3-oxoacyl-[acyl-carrier-protein] synthase I b3128 yhaG 16354 11687 7062 3429 239 0 and 5 4.1 CDS 1572 Putative enzymes putative hydrolase b3284 smg 17823 10104 7647 6655 261 0 and 5 4.1 CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4239 treC 8139 8631 3463 3851 292 0 and 5 4.1 CDS 1656 Carbon compound catabolism trehalase 6-P hydrolase b1255 yciC 2229 1143 918 468 -119 0 and 5 2.5 4.2 CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1976 - 3251 2173 1415 977 -130 0 and 5 4.2 CDS 837 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2584 yfiQ 6750 4314 2972 2123 -53 0 and 5 4.2 CDS 2661 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2927 epd 7837 5634 3403 2883 308 0 and 5 4.2 CDS 1020 Central intermediary metabolism D-erythrose 4-phosphate dehydrogenase b3094 exuR 6549 4035 2845 1727 -20 0 and 5 4.2 CDS 792 Carbon compound catabolism "negative regulator of exu regulon, exuT, uxaAC, and uxuB" b3170 yhbC 4561 2413 1991 776 -193 0 and 5 4.2 CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2683 ygaH 2530 1550 1132 837 8 0 and 5 4.3 CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2876 - 7699 4646 3435 4082 402 0 and 5 4.3 CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2997 - 3511 2421 1569 562 -282 0 and 5 4.3 CDS 1119 Putative enzymes putative hydrogenase subunit b3042 - 3872 2164 1740 1017 13 0 and 5 4.3 CDS 351 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3780 rhlB 2168 1809 845 407 -128 0 and 5 2.5 4.3 CDS 1266 "Transcription, RNA processing and degradation" putative ATP-dependent RNA helicase b4127 yjdJ 4495 3120 1993 2427 1316 0 and 5 4.3 CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0222 gmhA 4243 2626 1939 1211 54 0 and 5 4.4 CDS 579 Cell structure phosphoheptose isomerase b0306 ykgE 20738 14856 9409 6655 559 0 and 5 4.4 CDS 720 "Hypothetical, unclassified, unknown" putative dehydrogenase subunit b0307 ykgF 6357 5962 2866 1345 -44 0 and 5 4.4 CDS 1428 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0651 ybeK 5318 3814 2413 1901 46 0 and 5 4.4 CDS 936 "Translation, post-translational modification" putative tRNA synthetase b0729 sucD 8288 5710 3749 1396 212 0 and 5 4.4 CDS 870 Energy metabolism "succinyl-CoA synthetase, alpha subunit" b0759 galE 2153 1170 791 472 -290 0 and 5 2.5 4.4 CDS 1017 Carbon compound catabolism UDP-galactose-4-epimerase b1105 ycfM 2545 1603 1152 974 204 0 and 5 4.4 CDS 642 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2464 talA 5515 3608 2503 2039 436 0 and 5 4.4 CDS 951 Central intermediary metabolism transaldolase A b3804 hemD 7284 4302 3317 2046 355 0 and 5 4.4 CDS 741 "Biosynthesis of cofactors, prosthetic groups and carriers" uroporphyrinogen III synthase b4126 yjdI 2702 1887 1238 1482 602 0 and 5 4.4 CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0435 bolA 7320 4943 5074 1579 344 0 and 10 4.5 CDS 351 Cell structure possible regulator of murein genes b1108 ycfP 9302 4819 4323 3244 236 0 and 5 4.5 CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1479 sfcA 2270 1468 1054 1153 306 0 and 5 4.5 CDS 1725 Central intermediary metabolism NAD-linked malate dehydrogenase (malic enzyme) b2587 kgtP 5954 3489 2779 1172 47 0 and 5 4.5 CDS 1299 Transport and binding proteins alpha-ketoglutarate permease b2620 smpB 4009 2514 1852 605 -136 0 and 5 4.5 CDS 483 "Hypothetical, unclassified, unknown" small protein B b3001 - 6125 3676 3600 1302 322 0 and 10 4.5 CDS 1041 Putative enzymes putative reductase b3319 rplD 8115 6972 3757 6562 1530 0 and 5 4.5 CDS 606 "Translation, post-translational modification" "50S ribosomal subunit protein L4, regulates expression of S10 operon" b3472 - 6810 4658 4537 1478 -171 0 and 10 4.5 CDS 612 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1067 yceH 5752 3832 2722 1945 421 0 and 5 4.6 CDS 648 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1570 dicA 2460 1496 1149 506 -3 0 and 5 4.6 CDS 408 "Cell processes (incl. adaptation, protection)" regulator of dicB b2679 proX 2535 2031 1188 845 260 0 and 5 4.6 CDS 993 "Cell processes (incl. adaptation, protection)" high-affinity transport system for glycine betaine and proline b2785 ygcA 2804 1811 1318 787 58 0 and 5 4.6 CDS 1302 "Translation, post-translational modification" putative enzyme b3087 ygjR 3936 2173 1846 1006 164 0 and 5 4.6 CDS 1005 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4019 metH 2264 1462 1057 1554 362 0 and 5 4.6 CDS 3684 Amino acid biosynthesis and metabolism "B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF" b0084 ftsI 2821 1853 1342 1010 -3 0 and 5 4.7 CDS 1767 "Cell processes (incl. adaptation, protection)" septum formation; penicillin-binding protein 3; peptidoglycan synthetase b0134 panB 6354 3336 3045 1834 24 0 and 5 4.7 CDS 795 "Biosynthesis of cofactors, prosthetic groups and carriers" 3-methyl-2-oxobutanoate hydroxymethyltransferase b0146 sfsA 18211 9128 8691 6289 1165 0 and 5 4.7 CDS 705 Carbon compound catabolism probable regulator for maltose metabolism b0151 fhuC 2364 1431 1137 1405 275 0 and 5 4.7 CDS 798 Transport and binding proteins ATP-binding component of hydroxymate-dependent iron transport b0607 ybdQ 6511 4029 3105 2035 753 0 and 5 4.7 CDS 429 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1200 - 2035 1116 910 875 13 0 and 5 2.5 4.7 CDS 1101 Putative enzymes putative dihydroxyacetone kinase (EC 2.7.1.2) b2908 pepP 5820 3534 2795 1241 -127 0 and 5 4.7 CDS 1326 "Translation, post-translational modification" proline aminopeptidase P II b3130 yhaV 3613 2352 1729 759 48 0 and 5 4.7 CDS 465 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1406 ydbC 2011 1152 980 778 70 0 and 5 4.8 CDS 861 Putative enzymes putative dehydrogenase b1682 ynhD 3151 1777 1523 1086 118 0 and 5 4.8 CDS 747 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b3032 icc 2684 2155 1298 537 -65 0 and 5 4.8 CDS 828 Carbon compound catabolism regulator of lacZ b3092 uxaC 10797 6319 5249 5315 1114 0 and 5 4.8 CDS 1413 Carbon compound catabolism uronate isomerase b4352 yjiA 2008 1319 476 393 -126 0 and 5 2.5 4.8 CDS 855 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0882 clpA 5835 3906 3804 1408 488 0 and 10 4.9 CDS 2277 "Translation, post-translational modification" ATP-binding component of serine protease b0921 smtA 1970 1331 830 312 -248 0 and 5 2.5 4.9 CDS 786 "Hypothetical, unclassified, unknown" S-adenosylmethionine-dependent methyltransferase b0923 mukE 1981 1714 977 959 -237 0 and 5 4.9 CDS 678 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3033 yqiB 4441 2340 2195 1371 156 0 and 5 4.9 CDS 423 Putative enzymes putative enzyme b3095 yqjA 2368 1248 1163 818 72 0 and 5 4.9 CDS 663 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3464 ftsY 3245 2100 1606 679 -173 0 and 5 4.9 CDS 1494 "Cell processes (incl. adaptation, protection)" cell division membrane protein b3885 yihX 4204 2701 2062 1379 405 0 and 5 4.9 CDS 621 Putative enzymes putative phosphatase b3938 metJ 3688 1960 1831 420 -352 0 and 5 4.9 CDS 318 Amino acid biosynthesis and metabolism repressor of all met genes but metF b4037 malM 21899 18124 24523 15476 893 0 and 20 2.5 4.9 CDS 921 Carbon compound catabolism periplasmic protein of mal regulon b1832 - 3679 2433 1838 776 -214 0 and 5 5 CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3608 gpsA 6419 4434 3630 1615 -443 0 and 10 5 CDS 1020 Energy metabolism glycerol-3-phosphate dehydrogenase (NAD+) b0490 ybbL 1931 1369 662 564 -34 0 and 5 2.5 5.1 CDS 678 Putative transport proteins putative ATP-binding component of a transport system b3117 tdcB 20339 17746 12806 13010 1192 0 and 20 2.5 5.1 CDS 990 Amino acid biosynthesis and metabolism "threonine dehydratase, catabolic" b4401 arcA 6472 4180 3830 1648 280 0 and 10 5.1 CDS 717 Regulatory function "negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)" b0623 cspE 4598 3696 2771 341 252 0 and 10 2.5 5.2 CDS 210 Other known genes cold shock protein b0884 infA 5103 3306 4325 1334 360 0 and 10 5.2 CDS 219 "Translation, post-translational modification" protein chain initiation factor IF-1 b2516 yfgA 5152 4232 3018 1344 47 0 and 10 5.2 CDS 1014 Cell structure putative membrane protein b2792 - 1893 972 799 725 245 0 and 5 2.5 5.2 CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3115 tdcD 23053 23511 23815 22520 1585 0 and 20 5.2 CDS 1221 Energy metabolism putative kinase b3157 yhbT 4551 2709 2417 1068 54 0 and 10 2.5 5.2 CDS 525 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3781 trxA 5552 3428 2973 1451 306 0 and 10 5.2 CDS 384 "Biosynthesis of cofactors, prosthetic groups and carriers" thioredoxin 1 b4353 yjiX 1910 1282 671 126 -138 0 and 5 2.5 5.2 CDS 204 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0437 clpP 4466 3035 2619 567 -167 0 and 10 2.5 5.3 CDS 624 "Translation, post-translational modification" "ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5" b0917 ycaR 5469 3759 2942 1475 361 0 and 10 5.3 CDS 183 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1614 ydgA 11419 6464 5923 3054 477 0 and 10 5.3 CDS 1509 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2216 yojN 6521 4361 3308 1763 -1 0 and 10 5.3 CDS 2673 Putative regulatory proteins putative 2-component sensor protein b3028 mdaB 1869 1087 714 488 -138 0 and 5 2.5 5.3 CDS 582 Other known genes modulator of drug activity B b3248 yhdE 1867 1042 890 727 64 0 and 5 2.5 5.3 CDS 594 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0432 cyoA 1067 1346 635 529 -84 2.5 and 5 2.5 5.4 CDS 948 Energy metabolism cytochrome o ubiquinol oxidase subunit II b2285 nuoE 17272 15099 14828 11577 1028 0 and 20 2.5 5.4 CDS 501 Energy metabolism NADH dehydrogenase I chain E b3037 ygiB 6390 4992 3229 1791 11 0 and 10 5.4 CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1187 fadR 1823 1020 787 63 -273 0 and 5 2.5 5.5 CDS 720 Fatty acid and phospholipid metabolism "negative regulator for fad regulon, and positive activator of fabA" b1441 - 1827 1156 536 294 -90 0 and 5 2.5 5.5 CDS 1014 Putative transport proteins putative ATP-binding component of a transport system b2146 - 20185 14329 12630 12602 1631 0 and 20 5.5 CDS 1239 Putative enzymes putative oxidoreductase b2696 csrA 14883 10852 13230 4207 1042 0 and 10 5.5 CDS 186 Regulatory function "carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties" b3029 ygiN 4290 2745 2601 1224 410 0 and 10 5.5 CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4033 malF 16674 17790 13293 9087 325 0 and 20 2.5 5.5 CDS 1545 Transport and binding proteins "part of maltose permease, periplasmic" b4206 ytfB 1827 1035 804 403 83 0 and 5 2.5 5.5 CDS 675 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4390 nadR 1839 924 475 538 29 0 and 5 2.5 5.5 CDS 1254 "Biosynthesis of cofactors, prosthetic groups and carriers" probable nadAB transcriptional regulator b0411 tsx 4529 2786 2724 1319 256 0 and 10 5.6 CDS 885 Transport and binding proteins nucleoside channel; receptor of phage T6 and colicin K b0758 galT 1806 1197 692 362 -94 0 and 5 2.5 5.6 CDS 1047 Carbon compound catabolism galactose-1-phosphate uridylyltransferase b0865 ybjP 8468 4282 5385 2448 765 0 and 10 5.6 CDS 516 Putative enzymes putative enzyme b2287 nuoB 15815 13032 12141 8905 460 0 and 20 2.5 5.6 CDS 663 Energy metabolism NADH dehydrogenase I chain B b2501 ppk 1098 1328 591 316 -57 2.5 and 5 2.5 5.6 CDS 2067 Central intermediary metabolism polyphosphate kinase b3065 rpsU 11434 5913 11090 3339 514 0 and 10 5.6 CDS 216 "Translation, post-translational modification" 30S ribosomal subunit protein S21 b3648 gmk 6201 3522 3229 1802 58 0 and 10 5.6 CDS 624 Nucleotide biosynthesis and metabolism guanylate kinase b3836 - 4197 3823 2992 1219 -4 0 and 10 5.6 CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4171 miaA 16330 17257 17524 14280 1346 0 and 20 5.6 CDS 951 "Translation, post-translational modification" delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase b0413 ybaD 4094 2281 2086 900 -214 0 and 10 2.5 5.7 CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2091 gatD 15481 15902 14716 13679 1334 0 and 20 5.7 CDS 1041 Carbon compound catabolism galactitol-1-phosphate dehydrogenase b3099 yqjE 10259 5519 6137 3058 2138 0 and 10 5.7 CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3417 malP 17854 19639 12481 14208 1566 0 and 20 5.7 CDS 2394 Carbon compound catabolism maltodextrin phosphorylase b3609 secB 8517 6048 5359 2551 431 0 and 10 5.7 CDS 468 Transport and binding proteins protein export; molecular chaperone; may bind to signel sequence b3752 rbsK 4603 3224 3265 1378 -157 0 and 10 5.7 CDS 930 Carbon compound catabolism ribokinase b4177 purA 1799 1520 860 749 26 0 and 5 2.5 5.7 CDS 1299 Nucleotide biosynthesis and metabolism adenylosuccinate synthetase b4240 treB 17424 17842 11861 11946 1555 0 and 20 5.7 CDS 1422 Transport and binding proteins "PTS system enzyme II, trehalose specific" b0111 ampE 1780 1377 834 793 27 0 and 5 2.5 5.8 CDS 855 "Cell processes (incl. adaptation, protection)" regulates ampC b1243 oppA 17269 12862 10235 5209 1406 0 and 10 5.8 CDS 1632 Transport and binding proteins oligopeptide transport; periplasmic binding protein b2217 rcsB 9503 6699 6244 2868 144 0 and 10 5.8 CDS 651 Cell structure "positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)" b2610 ffh 4017 3223 2229 1206 -166 0 and 10 5.8 CDS 1362 Transport and binding proteins "GTP-binding export factor binds to signal sequence, GTP and RNA" b2788 ygcY 8618 5591 4974 2608 290 0 and 10 5.8 CDS 1341 Carbon compound catabolism putative glucarate dehydratase b3116 tdcC 14875 16824 10811 9938 1337 0 and 20 5.8 CDS 1332 Transport and binding proteins "anaerobically inducible L-threonine, L-serine permease" b3288 fmt 5057 4826 2819 1543 -159 0 and 10 5.8 CDS 948 "Translation, post-translational modification" 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase b3509 hdeB 14384 8594 9744 7363 1194 0 and 20 2.5 5.8 CDS 339 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1244 oppB 5319 6325 3748 1647 -28 0 and 10 5.9 CDS 921 Transport and binding proteins oligopeptide transport permease protein b2706 gutM 3891 3895 2457 1137 -73 0 and 10 2.5 5.9 CDS 360 Carbon compound catabolism glucitol operon activator b3432 glgB 4036 2806 2490 1256 66 0 and 10 5.9 CDS 2187 Cell structure "1,4-alpha-glucan branching enzyme" b3984 rplA 20237 15348 16914 14691 1900 0 and 20 5.9 CDS 705 "Translation, post-translational modification" "50S ribosomal subunit protein L1, regulates synthesis of L1 and L11" b1089 rpmF 5439 5335 5389 1718 722 0 and 10 6 CDS 174 "Translation, post-translational modification" 50S ribosomal subunit protein L32 b1267 yciO 4707 2833 3045 1473 55 0 and 10 6 CDS 657 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2898 ygfZ 5197 2811 3132 1634 508 0 and 10 6 CDS 981 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3865 yihA 6394 3928 4307 2002 91 0 and 10 6 CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4032 malG 13151 15759 11742 8241 1183 0 and 20 2.5 6 CDS 891 Transport and binding proteins "part of maltose permease, inner membrane" b0082 yabC 3713 2001 1870 557 -217 0 and 10 5 6.1 CDS 942 Structural proteins putative apolipoprotein b3637 rpmB 15322 17069 17002 9231 1591 0 and 20 6.1 CDS 237 "Translation, post-translational modification" 50S ribosomal subunit protein L28 b0687 seqA 6444 4215 3555 2091 40 0 and 10 6.2 CDS 546 "DNA replication, recombination, modification and repair" negative modulator of initiation of replication b1619 hdhA 5241 2700 3763 1701 535 0 and 10 6.2 CDS 768 Central intermediary metabolism "NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids" b3176 mrsA 3839 2427 2107 1256 286 0 and 10 6.2 CDS 1338 Central intermediary metabolism similar to phosphoglucomutases and phosphomannomutases b3203 yhbH 14423 8594 8632 10502 1569 0 and 20 6.2 CDS 288 "Hypothetical, unclassified, unknown" probable sigma-54 modulation protein b3510 hdeA 26317 17628 19460 14463 2778 0 and 20 6.2 CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0683 fur 11479 7122 7656 3841 120 0 and 10 6.3 CDS 447 Regulatory function negative regulator b1654 ydhD 6129 4201 4642 2033 486 0 and 10 6.3 CDS 348 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2609 rpsP 20088 14261 13443 10348 2231 0 and 20 6.3 CDS 249 "Translation, post-translational modification" 30S ribosomal subunit protein S16 b2699 recA 6145 4857 4908 2057 -6 0 and 10 6.3 CDS 1062 "DNA replication, recombination, modification and repair" "DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease" b2905 gcvT 12028 10312 7996 6017 380 0 and 20 5 6.3 CDS 1095 Central intermediary metabolism aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system b3610 grxC 11646 7514 7738 3865 716 0 and 10 6.3 CDS 252 "Biosynthesis of cofactors, prosthetic groups and carriers" glutaredoxin 3 b0725 - 3815 2086 2020 1288 6 0 and 10 6.4 CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1175 minD 9240 9673 7101 3154 18 0 and 10 6.4 CDS 813 "Cell processes (incl. adaptation, protection)" "cell division inhibitor, a membrane ATPase, activates minC" b2388 glk 8017 5702 5269 2734 -91 0 and 10 6.4 CDS 966 Carbon compound catabolism glucokinase b2743 pcm 3740 2371 1982 1264 253 0 and 10 6.4 CDS 627 "Translation, post-translational modification" L-isoaspartate protein carboxylmethyltransferase type II b3496 yhiP 4600 3071 2412 1546 244 0 and 10 6.4 CDS 1470 Transport and binding proteins putative transport protein b4144 yjeI 8021 5487 4906 2729 406 0 and 10 6.4 CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0391 yaiE 6976 4441 5069 2395 2025 0 and 10 6.5 CDS 285 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1847 yebF 5610 2862 3040 1944 1229 0 and 10 6.5 CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1928 yedD 4455 2359 2369 1538 171 0 and 10 6.5 CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2294 - 16456 13841 10949 12767 1941 0 and 20 6.5 CDS 513 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3291 mscL 11250 6547 7278 3879 864 0 and 10 6.5 CDS 411 "Cell processes (incl. adaptation, protection)" mechanosensitive channel b3834 yigP 4462 3309 2334 1530 70 0 and 10 6.5 CDS 606 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3916 pfkA 11304 8421 9863 6283 998 0 and 20 5 6.5 CDS 963 Energy metabolism 6-phosphofructokinase I b4226 ppa 1161 2689 2080 1208 180 2.5 and 10 6.5 CDS 531 Central intermediary metabolism inorganic pyrophosphatase b0168 map 9986 5945 5850 3490 919 0 and 10 6.6 CDS 795 "Translation, post-translational modification" methionine aminopeptidase b0426 yajQ 3441 1772 2188 1065 453 0 and 10 5 6.6 CDS 510 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1130 phoP 5910 3502 3407 2052 106 0 and 10 6.6 CDS 672 Regulatory function transcriptional regulatory protein b1841 - 6361 4349 3235 2210 247 0 and 10 6.6 CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3049 glgS 4149 3331 4326 1459 905 0 and 10 6.6 CDS 201 Cell structure "glycogen biosynthesis, rpoS dependent" b3124 yhaD 10704 15308 15593 11069 905 0 and 20 5 6.6 CDS 1227 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3306 rpsH 12835 14093 11043 9886 1573 0 and 20 6.6 CDS 393 "Translation, post-translational modification" "30S ribosomal subunit protein S8, and regulator" b3983 rplK 18104 13615 16026 11926 2234 0 and 20 6.6 CDS 429 "Translation, post-translational modification" 50S ribosomal subunit protein L11 b0083 ftsL 6138 3425 3078 2176 429 0 and 10 6.7 CDS 366 "Cell processes (incl. adaptation, protection)" cell division protein; ingrowth of wall at septum b0114 aceE 11435 12702 8090 9921 1449 0 and 20 6.7 CDS 2664 Energy metabolism pyruvate dehydrogenase (decarboxylase component) b0308 ykgG 7611 6130 4090 2719 487 0 and 10 6.7 CDS 849 Putative transport proteins putative transporter b0684 fldA 8317 6071 5798 2964 27 0 and 10 6.7 CDS 531 Energy metabolism flavodoxin 1 b0728 sucC 535 16939 16633 11564 2774 2.5 and 20 6.7 CDS 1167 Energy metabolism "succinyl-CoA synthetase, beta subunit" b1418 cybB 3368 1957 2108 1203 380 0 and 10 6.7 CDS 567 Energy metabolism cytochrome b(561) b1739 osmE 3385 2427 2739 707 963 0 and 10 5 6.7 CDS 339 Regulatory function activator of ntrL gene b3300 prlA 17553 16550 14892 14901 2187 0 and 20 6.7 CDS 1332 Putative transport proteins putative ATPase subunit of translocase b3803 hemX 5127 3685 3485 1815 68 0 and 10 6.7 CDS 1182 "Biosynthesis of cofactors, prosthetic groups and carriers" uroporphyrinogen III methylase b0180 fabZ 10226 9627 7505 5486 537 0 and 20 5 6.8 CDS 456 Fatty acid and phospholipid metabolism (3R)-hydroxymyristol acyl carrier protein dehydratase b2090 gatR_2 10087 14310 13259 11455 451 0 and 20 5 6.8 CDS 339 Carbon compound catabolism "split galactitol utilization operon repressor, fragment 2" b2282 nuoH 10286 8031 8675 7041 1348 0 and 20 6.8 CDS 978 Energy metabolism NADH dehydrogenase I chain H b2478 dapA 8319 6007 5531 3002 67 0 and 10 6.8 CDS 879 Amino acid biosynthesis and metabolism dihydrodipicolinate synthase b2780 pyrG 7224 5443 4442 2611 562 0 and 10 6.8 CDS 1638 Central intermediary metabolism CTP synthetase b3186 rplU 18708 15765 21170 9544 2406 0 and 20 6.8 CDS 312 "Translation, post-translational modification" 50S ribosomal subunit protein L21 b4167 yjeF 1627 1259 586 521 -116 2.5 and 5 5 6.8 CDS 1548 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1914 uvrY 3282 2499 1896 742 -91 0 and 10 5 6.9 CDS 657 Putative regulatory proteins putative 2-component transcriptional regulator b2480 bcp 5534 4135 4093 2020 472 0 and 10 6.9 CDS 471 Transport and binding proteins bacterioferritin comigratory protein b3041 ribB 3296 2089 1803 637 67 0 and 10 5 6.9 CDS 654 "Biosynthesis of cofactors, prosthetic groups and carriers" "3,4 dihydroxy-2-butanone-4-phosphate synthase" b3097 yqjC 14920 15515 16584 10603 2025 0 and 20 6.9 CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3649 rpoZ 3294 2756 2338 888 -50 0 and 10 5 6.9 CDS 276 "Transcription, RNA processing and degradation" "RNA polymerase, omega subunit" b3908 sodA 8109 4699 5083 2986 1567 0 and 10 6.9 CDS 621 "Cell processes (incl. adaptation, protection)" "superoxide dismutase, manganese" b4059 ssb 3283 2077 2450 645 80 0 and 10 5 6.9 CDS 537 "DNA replication, recombination, modification and repair" ssDNA-binding protein b2414 cysK 9354 6567 5102 3477 634 0 and 10 7 CDS 972 Amino acid biosynthesis and metabolism "cysteine synthase A, O-acetylserine sulfhydrolase A" b3416 malQ 9626 13914 9147 6916 707 0 and 20 5 7 CDS 2085 Carbon compound catabolism 4-alpha-glucanotransferase (amylomaltase) b4255 yjgD 11422 7775 8468 4233 1982 0 and 10 7 CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1651 gloA 8122 4186 5292 3062 1468 0 and 10 7.1 CDS 408 "Hypothetical, unclassified, unknown" lactoylglutathione lyase b2619 - 3180 1703 1844 708 -38 0 and 10 5 7.1 CDS 477 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3035 tolC 4834 3851 3309 1814 200 0 and 10 7.1 CDS 1488 "Cell processes (incl. adaptation, protection)" outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes b0053 surA 4243 4002 3040 1620 270 0 and 10 7.2 CDS 1287 Other known genes survival protein b0240 crl 3167 3467 3860 1066 310 0 and 10 5 7.2 CDS 402 Cell structure transcriptional regulator of cryptic csgA gene for curli surface fibers b0436 tig 1523 2464 2923 833 198 2.5 and 10 5 7.2 CDS 1299 "Cell processes (incl. adaptation, protection)" trigger factor; a molecular chaperone involved in cell division b1376 ynaF 13168 6987 7400 5056 977 0 and 10 7.2 CDS 507 Structural proteins putative filament protein b1586 - 3878 2201 2276 1484 129 0 and 10 7.2 CDS 348 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2665 ygaU 8338 4233 6110 3179 1266 0 and 10 7.2 CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2707 srlR 6018 5092 4657 2289 -250 0 and 10 7.2 CDS 774 Carbon compound catabolism "regulator for gut (srl), glucitol operon" b3230 rpsI 3169 2362 2893 1168 594 0 and 10 5 7.2 CDS 393 "Translation, post-translational modification" 30S ribosomal subunit protein S9 b3308 rplE 13868 20258 14855 12385 2015 0 and 20 7.2 CDS 540 "Translation, post-translational modification" 50S ribosomal subunit protein L5 b3321 rpsJ 11840 8681 7628 7026 1708 0 and 20 7.2 CDS 312 "Translation, post-translational modification" 30S ribosomal subunit protein S10 b3636 rpmG 9094 10605 11322 4782 1234 0 and 20 5 7.2 CDS 168 "Translation, post-translational modification" 50S ribosomal subunit protein L33 b0145 dksA 7314 4591 4863 2813 1033 0 and 10 7.3 CDS 456 "DNA replication, recombination, modification and repair" dnaK suppressor protein b0786 ybhL 5533 3893 3918 2150 238 0 and 10 7.3 CDS 705 Membrane proteins "orf, hypothetical protein" b1641 slyB 13496 7866 9095 5230 1518 0 and 10 7.3 CDS 468 "Hypothetical, unclassified, unknown" putative outer membrane protein b2113 mrp 3118 2756 2364 1193 -111 0 and 10 5 7.3 CDS 1140 Central intermediary metabolism putative ATPase b0166 dapD 4268 3802 3926 1669 163 0 and 10 7.4 CDS 825 Amino acid biosynthesis and metabolism "2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" b0172 frr 3078 2390 2705 1005 -86 0 and 10 5 7.4 CDS 558 "Translation, post-translational modification" ribosome releasing factor b0911 rpsA 8558 10855 10041 6770 1246 0 and 20 5 7.4 CDS 1674 "Translation, post-translational modification" 30S ribosomal subunit protein S1 b1107 ycfO 3059 1937 1549 927 -49 0 and 10 5 7.4 CDS 1026 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1783 yeaG 8555 7420 7962 6244 1223 0 and 20 5 7.4 CDS 1935 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2185 rplY 15786 7980 13400 6179 1869 0 and 10 7.4 CDS 285 "Translation, post-translational modification" 50S ribosomal subunit protein L25 b2281 nuoI 8571 6874 7202 5684 1252 0 and 20 5 7.4 CDS 543 Energy metabolism NADH dehydrogenase I chain I b2608 yfjA 18667 15659 16470 17086 2841 0 and 20 7.4 CDS 558 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3229 sspA 5162 4878 3458 2021 98 0 and 10 7.4 CDS 639 Regulatory function regulator of transcription; stringent starvation protein A b3320 rplC 8709 6421 4410 5056 997 0 and 20 5 7.4 CDS 630 "Translation, post-translational modification" 50S ribosomal subunit protein L3 b3429 glgA 8580 6273 5843 5251 696 0 and 20 5 7.4 CDS 1434 Cell structure glycogen synthase b3431 glgX 10638 5754 5709 4189 305 0 and 10 7.4 CDS 1974 Cell structure "part of glycogen operon, a glycosyl hydrolase, debranching enzyme" b3835 yigR 3269 2777 1969 1278 -23 0 and 10 7.4 CDS 1641 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4139 aspA 20530 16565 12496 8078 550 0 and 10 7.4 CDS 1482 Central intermediary metabolism aspartate ammonia-lyase (aspartase) b0191 yaeJ 3579 1993 1965 1424 351 0 and 10 7.5 CDS 423 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1764 selD 7678 4414 4154 3063 443 0 and 10 7.5 CDS 1044 "Translation, post-translational modification" "selenophosphate synthase, H(2)Se added to acrylyl-tRNA" b1840 - 6858 5098 4272 2733 244 0 and 10 7.5 CDS 873 "Cell processes (incl. adaptation, protection)" putative resistance protein b2280 nuoJ 8457 7530 8219 6103 1054 0 and 20 5 7.5 CDS 555 Energy metabolism NADH dehydrogenase I chain J b2607 trmD 16729 14533 15654 11989 2651 0 and 20 7.5 CDS 768 "Translation, post-translational modification" tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase b2684 emrR 3156 1938 2082 1250 -27 0 and 10 7.5 CDS 531 "phage, transposon, or plasmid" regulator of plasmid mcrB operon (microcin B17 synthesis) b2896 - 3141 2184 2303 1239 297 0 and 10 7.5 CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3169 nusA 8506 7349 5148 4921 603 0 and 20 5 7.5 CDS 1488 "Transcription, RNA processing and degradation" transcription pausing; L factor b3303 rpsE 11053 9216 8540 7708 1757 0 and 20 7.5 CDS 504 "Translation, post-translational modification" 30S ribosomal subunit protein S5 b0880 cspD 13875 8299 10966 5571 3625 0 and 10 7.6 CDS 225 "Cell processes (incl. adaptation, protection)" cold shock protein b1539 ydfG 6325 4017 4415 2532 686 0 and 10 7.6 CDS 747 Putative enzymes putative oxidoreductase b1719 thrS 11330 12935 11062 8816 1826 0 and 20 7.6 CDS 1929 "Translation, post-translational modification" threonine tRNA synthetase b2147 yeiA 15768 12961 12505 10871 2562 0 and 20 7.6 CDS 1242 Putative enzymes putative oxidoreductase b2284 nuoF 8309 6045 7247 4992 136 0 and 20 5 7.6 CDS 1338 Energy metabolism NADH dehydrogenase I chain F b3304 rplR 8279 8897 7256 6768 1100 0 and 20 5 7.6 CDS 354 "Translation, post-translational modification" 50S ribosomal subunit protein L18 b3305 rplF 10930 10250 11279 10818 1745 0 and 20 7.6 CDS 534 "Translation, post-translational modification" 50S ribosomal subunit protein L6 b3309 rplX 11198 9311 9502 11431 1811 0 and 20 7.6 CDS 315 "Translation, post-translational modification" 50S ribosomal subunit protein L24 b3985 rplJ 17510 13814 17691 12004 2804 0 and 20 7.6 CDS 498 "Translation, post-translational modification" 50S ribosomal subunit protein L10 b0220 ykfE 4736 2877 4103 1921 781 0 and 10 7.7 CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0322 yahH 8020 9414 5369 4678 755 0 and 20 5 7.7 CDS 321 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0486 ybaT 2947 1592 1555 1167 16 0 and 10 5 7.7 CDS 1293 Putative transport proteins putative amino acid/amine transport protein b1088 yceD 10623 9503 10571 4317 917 0 and 10 7.7 CDS 522 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1245 oppC 7993 10907 9127 4695 175 0 and 20 5 7.7 CDS 909 Transport and binding proteins homolog of Salmonella oligopeptide transport permease protein b1642 slyA 2963 2178 2505 715 65 0 and 10 5 7.7 CDS 441 "Hypothetical, unclassified, unknown" transcriptional regulator for cryptic hemolysin b2288 nuoA 18410 13215 10453 7498 554 0 and 10 7.7 CDS 444 Energy metabolism NADH dehydrogenase I chain A b2551 glyA 3570 3007 2658 1444 252 0 and 10 7.7 CDS 1254 Amino acid biosynthesis and metabolism serine hydroxymethyltransferase b2630 yfjN 2950 1768 2066 957 23 0 and 10 5 7.7 CDS 1074 "Cell processes (incl. adaptation, protection)" putative cell division protein b3611 yibN 5808 3883 4372 2364 337 0 and 10 7.7 CDS 432 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4172 hfq 14813 10366 9932 5987 770 0 and 10 7.7 CDS 309 "phage, transposon, or plasmid" "host factor I for bacteriophage Q beta replication, a growth-related protein" b4243 yjgF 6561 4360 4674 2679 1711 0 and 10 7.7 CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4376 osmY 11101 5875 7495 4526 1990 0 and 10 7.7 CDS 606 "Cell processes (incl. adaptation, protection)" hyperosmotically inducible periplasmic protein b0200 yaeD 5297 3685 4003 2170 993 0 and 10 7.8 CDS 576 Central intermediary metabolism putative phosphatase b2278 nuoL 10370 9486 7945 7970 1762 0 and 20 7.8 CDS 1842 Energy metabolism NADH dehydrogenase I chain L b2417 crr 14448 13324 14970 10675 2468 0 and 20 7.8 CDS 510 Transport and binding proteins "PTS system, glucose-specific IIA component" b2834 - 2928 1723 1553 859 -141 0 and 10 5 7.8 CDS 1041 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2947 gshB 3534 2602 1987 1450 9 0 and 10 7.8 CDS 951 "Biosynthesis of cofactors, prosthetic groups and carriers" glutathione synthetase b3164 pnp 7898 8060 5044 4783 677 0 and 20 5 7.8 CDS 2205 "Transcription, RNA processing and degradation" polynucleotide phosphorylase; cytidylate kinase activity b3202 rpoN 7843 4616 4855 5763 1148 0 and 20 5 7.8 CDS 1434 Regulatory function "RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation" b3244 tldD 4009 2670 2987 1651 104 0 and 10 7.8 CDS 1446 "Hypothetical, unclassified, unknown" suppresses inhibitory activity of CsrA b3307 rpsN 7885 10240 8595 5985 1219 0 and 20 5 7.8 CDS 306 "Translation, post-translational modification" 30S ribosomal subunit protein S14 b3433 asd 4870 3946 2700 2008 166 0 and 10 7.8 CDS 1104 Amino acid biosynthesis and metabolism aspartate-semialdehyde dehydrogenase b0329 yahO 9385 6134 11413 3899 3128 0 and 10 7.9 CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0407 yajC 5898 5026 6043 2449 314 0 and 10 7.9 CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0956 ycbG 3018 1685 2022 1252 159 0 and 10 7.9 CDS 453 Putative enzymes putative dehydrogenase b2279 nuoK 8168 7283 7887 6662 1426 0 and 20 7.9 CDS 303 Energy metabolism NADH dehydrogenase I chain K b3357 crp 13007 10504 7109 5395 535 0 and 10 7.9 CDS 633 Regulatory function cyclic AMP receptor protein b3843 yigC 2896 2384 1504 955 23 0 and 10 5 7.9 CDS 1494 "Hypothetical, unclassified, unknown" putative oxidoreductase b0389 yaiA 1567 2300 2184 741 260 2.5 and 10 5 8 CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0406 tgt 2867 1892 2434 1083 379 0 and 10 5 8 CDS 1128 "Translation, post-translational modification" tRNA-guanine transglycosylase b0419 yajO 7799 5080 5510 3975 1376 0 and 20 8 CDS 1047 Central intermediary metabolism putative NAD(P)H-dependent xylose reductase b0480 ushA 7514 4679 5306 4323 1102 0 and 20 5 8 CDS 1653 Central intermediary metabolism UDP-sugar hydrolase (5'-nucleotidase) b0756 galM 2871 1756 1948 692 29 0 and 10 5 8 CDS 1041 Central intermediary metabolism galactose-1-epimerase (mutarotase) b2266 elaB 10582 7207 9151 4440 5601 0 and 10 8 CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3180 yhbY 2852 2583 3439 887 9 0 and 10 5 8 CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3298 rpsM 18418 17241 16869 16554 3224 0 and 20 8 CDS 357 "Translation, post-translational modification" 30S ribosomal subunit protein S13 b4216 ytfJ 4508 3144 2600 1899 504 0 and 10 8 CDS 555 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1090 plsX 8082 4659 4609 3448 380 0 and 10 8.1 CDS 1041 Fatty acid and phospholipid metabolism glycerolphosphate auxotrophy in plsB background b1174 minE 7178 6247 5250 3041 96 0 and 10 8.1 CDS 267 "Cell processes (incl. adaptation, protection)" "cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation" b1784 yeaH 2839 1974 1563 933 -6 0 and 10 5 8.1 CDS 1284 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2897 ygfY 3410 2359 2883 1445 195 0 and 10 8.1 CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3709 tnaB 12985 11098 9401 9635 2363 0 and 20 8.1 CDS 1248 Transport and binding proteins low affinity tryptophan permease b4142 mopB 8732 7132 7937 6835 1584 0 and 20 8.1 CDS 294 "Cell processes (incl. adaptation, protection)" "GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity" b4222 ytfP 2843 2494 3334 1108 -46 0 and 10 5 8.1 CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0116 lpdA 11954 9855 7599 9262 2205 0 and 20 8.2 CDS 1425 Energy metabolism lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex b3231 rplM 9054 6872 8990 3882 1639 0 and 10 8.2 CDS 429 "Translation, post-translational modification" 50S ribosomal subunit protein L13 b0015 dnaJ 2777 1766 1553 1176 473 0 and 10 5 8.3 CDS 1131 "Cell processes (incl. adaptation, protection)" chaperone with DnaK; heat shock protein b0096 lpxC 3893 2913 2887 1690 640 0 and 10 8.3 CDS 918 Cell structure UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis b0169 rpsB 8007 6283 6792 3473 1028 0 and 10 8.3 CDS 726 "Translation, post-translational modification" 30S ribosomal subunit protein S2 b0893 serS 2758 1838 1879 986 209 0 and 10 5 8.3 CDS 1293 "Translation, post-translational modification" serine tRNA synthetase; also charges selenocystein tRNA with serine b0912 himD 7116 5500 7764 4062 1206 0 and 20 5 8.3 CDS 285 "DNA replication, recombination, modification and repair" "integration host factor (IHF), beta subunit; site-specific recombination" b1104 ycfL 3427 2151 1910 1485 357 0 and 10 8.3 CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1724 - 7043 4719 4438 3861 832 0 and 20 5 8.3 CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1957 - 3916 2662 3246 1692 186 0 and 10 8.3 CDS 183 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2042 galF 6188 3994 5178 2672 544 0 and 10 8.3 CDS 894 Central intermediary metabolism "homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase" b2416 ptsI 18148 13845 14071 14190 3388 0 and 20 8.3 CDS 1728 Transport and binding proteins PEP-protein phosphotransferase system enzyme I b2996 hybA 2780 2631 1991 1025 176 0 and 10 5 8.3 CDS 987 Energy metabolism hydrogenase-2 small subunit b3296 rpsD 14137 13422 13031 13960 2648 0 and 20 8.3 CDS 621 "Translation, post-translational modification" 30S ribosomal subunit protein S4 b3936 rpmE 8245 9033 8555 3573 1594 0 and 10 8.3 CDS 213 "Translation, post-translational modification" 50S ribosomal subunit protein L31 b0963 mgsA 9320 7446 7218 4092 395 0 and 10 8.4 CDS 468 "Hypothetical, unclassified, unknown" methylglyoxal synthase b2283 nuoG 6942 5746 6021 4621 869 0 and 20 5 8.4 CDS 2733 Energy metabolism NADH dehydrogenase I chain G b2595 - 2742 3636 2890 1069 -222 0 and 10 5 8.4 CDS 738 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2697 alaS 9562 8851 7502 4210 657 0 and 10 8.4 CDS 2631 "Translation, post-translational modification" alanyl-tRNA synthetase b3210 arcB 10797 6448 6275 4739 405 0 and 10 8.4 CDS 2331 Regulatory function "aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA" b3833 ubiE 2747 2276 1409 375 -221 0 and 10 5 8.4 CDS 756 "Hypothetical, unclassified, unknown" "2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone" b0190 yaeQ 2715 1643 1459 1036 216 0 and 10 5 8.5 CDS 546 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2154 yeiG 3173 1862 1758 1403 388 0 and 10 8.5 CDS 837 Central intermediary metabolism putative esterase (EC 3.1.1.-). b2175 spr 6732 6904 8360 3833 213 0 and 20 5 8.5 CDS 567 Structural proteins putative lipoprotein b2463 - 7095 5065 4366 3688 1399 0 and 20 8.5 CDS 2280 Central intermediary metabolism putative multimodular enzyme b2703 srlE 14352 13624 8934 10419 2786 0 and 20 8.5 CDS 960 Transport and binding proteins "PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components" b2875 - 6724 4615 3981 4050 737 0 and 20 5 8.5 CDS 1626 Putative enzymes putative synthases b3012 yqhE 2751 1903 1716 1214 562 0 and 10 8.5 CDS 711 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3297 rpsK 14345 14222 13267 13110 2798 0 and 20 8.5 CDS 390 "Translation, post-translational modification" 30S ribosomal subunit protein S11 b3302 rpmD 8341 7650 6802 5828 1634 0 and 20 8.5 CDS 180 "Translation, post-translational modification" 50S ribosomal subunit protein L30 b4138 dcuA 6840 6235 5364 3893 879 0 and 20 5 8.5 CDS 1302 Transport and binding proteins anaerobic dicarboxylate transport b0019 nhaA 2796 1606 1698 1243 332 0 and 10 8.6 CDS 1167 Transport and binding proteins "Na+/H antiporter, pH dependent" b1004 wrbA 7321 3904 4575 3274 1426 0 and 10 8.6 CDS 597 Amino acid biosynthesis and metabolism trp repressor binding protein; affects association of trp repressor and operator b1723 pfkB 9286 5951 5353 4149 1438 0 and 10 8.6 CDS 930 Energy metabolism 6-phosphofructokinase II; suppressor of pfkA b2209 eco 15626 9806 10706 9317 3096 0 and 20 8.6 CDS 489 "Translation, post-translational modification" "ecotin, a serine protease inhibitor" b2415 ptsH 19119 14800 16190 12984 3819 0 and 20 8.6 CDS 258 Transport and binding proteins PTS system protein HPr b4108 phnA 5156 2621 3657 2304 438 0 and 10 8.6 CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0049 apaH 3569 1956 2220 1603 446 0 and 10 8.7 CDS 843 Nucleotide biosynthesis and metabolism diadenosine tetraphosphatase b0863 artI 10308 7274 8283 4635 984 0 and 10 8.7 CDS 732 Transport and binding proteins arginine 3rd transport system periplasmic binding protein b0970 yccA 2657 2733 2480 998 71 0 and 10 5 8.7 CDS 660 Putative transport proteins putative carrier/transport protein b1091 fabH 6508 4298 4500 4141 672 0 and 20 5 8.7 CDS 954 Fatty acid and phospholipid metabolism 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase b2514 hisS 3166 3570 3563 1427 34 0 and 10 8.7 CDS 1275 "Translation, post-translational modification" histidine tRNA synthetase b3414 yhgI 2678 1843 1742 1110 106 0 and 10 5 8.7 CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3430 glgC 7713 5003 4716 3478 381 0 and 10 8.7 CDS 1296 Cell structure glucose-1-phosphate adenylyltransferase b0710 ybgI 2636 1991 1774 883 203 0 and 10 5 8.8 CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1003 yccJ 4027 2403 3000 1839 1484 0 and 10 8.8 CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1051 msyB 16858 10213 17214 8727 3501 0 and 20 8.8 CDS 378 Transport and binding proteins acidic protein suppresses mutants lacking function of protein export b1809 - 2862 1954 2257 1302 235 0 and 10 8.8 CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2150 mglB 12995 8541 8542 5895 1895 0 and 10 8.8 CDS 999 Transport and binding proteins galactose-binding transport protein; receptor for galactose taxis b2688 gshA 6409 6956 5171 3798 658 0 and 20 5 8.8 CDS 1557 "Biosynthesis of cofactors, prosthetic groups and carriers" gamma-glutamate-cysteine ligase b2959 yggL 6393 4052 5402 3235 1125 0 and 20 5 8.8 CDS 357 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3204 ptsN 6398 5009 4419 5652 433 0 and 20 5 8.8 CDS 492 Transport and binding proteins "phosphotransferase system enzyme IIA, regulates N metabolism" b0092 ddlB 5423 3029 3239 2487 547 0 and 10 8.9 CDS 921 Cell structure "D-alanine-D-alanine ligase B, affects cell division" b0095 ftsZ 6315 6400 5887 3832 1230 0 and 20 5 8.9 CDS 1152 "Cell processes (incl. adaptation, protection)" cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase b0395 - 2619 2061 1853 849 207 0 and 10 5 8.9 CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1712 himA 14047 14516 15187 8045 2948 0 and 20 8.9 CDS 300 "DNA replication, recombination, modification and repair" "integration host factor (IHF), alpha subunit; site specific recombination" b2097 - 13156 8502 9097 7008 2762 0 and 20 8.9 CDS 1125 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2346 vacJ 2619 2045 1653 665 -212 0 and 10 5 8.9 CDS 756 Membrane proteins lipoprotein precursor b2914 rpiA 2625 1750 1493 707 593 0 and 10 5 8.9 CDS 660 Energy metabolism "ribosephosphate isomerase, constitutive" b3179 ftsJ 7578 6611 4806 3478 312 0 and 10 8.9 CDS 630 "Cell processes (incl. adaptation, protection)" cell division protein b3228 sspB 2610 3460 2507 1060 -126 0 and 10 5 8.9 CDS 498 Regulatory function stringent starvation protein B b0055 yabH 3354 2011 1810 1550 70 0 and 10 9 CDS 816 "Hypothetical, unclassified, unknown" putative DNA binding protein b0163 yaeH 6167 4736 5443 3301 1049 0 and 20 5 9 CDS 387 Structural proteins putative structural protein b0438 clpX 5146 4283 4794 2373 326 0 and 10 9 CDS 1275 "Translation, post-translational modification" "ATP-dependent specificity component of clpP serine protease, chaperone" b0643 ybeL 16419 12164 11391 7587 1892 0 and 10 9 CDS 483 Structural proteins putative alpha helical protein b1208 ychB 4856 4272 3954 2252 359 0 and 10 9 CDS 852 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1851 edd 6659 4583 4567 3694 1438 0 and 20 9 CDS 1812 Central intermediary metabolism 6-phosphogluconate dehydratase b2741 rpoS 11613 8132 8450 5359 1668 0 and 10 9 CDS 993 "Transcription, RNA processing and degradation" "RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins" b2977 glcG 12305 8241 8571 11073 2622 0 and 20 9 CDS 405 Carbon compound catabolism "orf, hypothetical protein" b3009 yghB 2708 1937 1591 1257 429 0 and 10 9 CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3831 udp 8007 5331 5191 3699 1813 0 and 10 9 CDS 762 Nucleotide biosynthesis and metabolism uridine phosphorylase b4259 holC 3418 1881 2390 1584 192 0 and 10 9 CDS 444 "DNA replication, recombination, modification and repair" "DNA polymerase III, chi subunit" b0871 poxB 6046 3859 3500 3183 775 0 and 20 5 9.1 CDS 1719 Carbon compound catabolism pyruvate oxidase b0890 ftsK 2579 1334 1507 1137 -48 0 and 10 5 9.1 CDS 3990 "Cell processes (incl. adaptation, protection)" cell division protein b2585 pssA 5410 4114 5212 2519 133 0 and 10 9.1 CDS 1359 Fatty acid and phospholipid metabolism phosphatidylserine synthase; phospholipid synthesis b3126 yhaF 16498 19836 23292 19151 3574 0 and 20 9.1 CDS 771 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3750 rbsC 6734 6109 4830 3141 610 0 and 10 9.1 CDS 966 Transport and binding proteins D-ribose high-affinity transport system b4025 pgi 10754 6949 6002 5007 588 0 and 10 9.1 CDS 1650 Energy metabolism glucosephosphate isomerase b4129 lysU 10522 9799 7413 8190 2292 0 and 20 9.1 CDS 1518 "Translation, post-translational modification" "lysine tRNA synthetase, inducible; heat shock protein" b0094 ftsA 7772 5740 7907 3661 1177 0 and 10 9.2 CDS 1263 "Cell processes (incl. adaptation, protection)" "ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes" b0658 ybeX 2557 1817 1761 1192 172 0 and 10 5 9.2 CDS 879 Putative enzymes putative transport protein b0767 ybhE 6189 4203 4453 2913 1353 0 and 10 9.2 CDS 996 Central intermediary metabolism putative isomerase b1913 uvrC 2552 2067 1599 1152 268 0 and 10 5 9.2 CDS 1767 "Transcription, RNA processing and degradation" "excinuclease ABC, subunit C; repair of UV damage to DNA" b1967 yedU 4255 2261 2505 2001 695 0 and 10 9.2 CDS 852 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3192 yrbC 2545 2151 2035 806 -25 0 and 10 5 9.2 CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0125 hpt 2529 2511 2653 1113 335 0 and 10 5 9.3 CDS 549 Nucleotide biosynthesis and metabolism hypoxanthine phosphoribosyltransferase b1681 ynhC 3359 1944 2187 1593 240 0 and 10 9.3 CDS 1272 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2007 yeeX 18082 13867 12064 8612 1882 0 and 10 9.3 CDS 396 Structural proteins putative alpha helix protein b2041 rfbB 1402 2105 1348 922 -143 2.5 and 10 5 9.3 CDS 1086 Central intermediary metabolism "dTDP-glucose 4,6 dehydratase" b2471 yffB 4083 2800 2557 1934 348 0 and 10 9.3 CDS 357 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2742 nlpD 14895 12986 12879 7071 857 0 and 10 9.3 CDS 1140 Membrane proteins lipoprotein b3310 rplN 7518 9887 10051 9371 1697 0 and 20 9.3 CDS 372 "Translation, post-translational modification" 50S ribosomal subunit protein L14 b3838 - 3494 2701 2516 1655 99 0 and 10 9.3 CDS 438 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3982 nusG 5905 4544 5641 3321 316 0 and 20 5 9.3 CDS 546 "Transcription, RNA processing and degradation" component in transcription antitermination b0026 ileS 2518 1472 1663 984 311 0 and 10 5 9.4 CDS 2817 "Translation, post-translational modification" isoleucine tRNA synthetase b0118 acnB 6009 4413 3530 2871 1284 0 and 10 9.4 CDS 2598 Energy metabolism aconitate hydrase B b0611 rna 2507 1383 1286 1063 183 0 and 10 5 9.4 CDS 807 "DNA replication, recombination, modification and repair" "RNase I, cleaves phosphodiester bond between any two nucleotides" b1064 grxB 8656 6474 6350 4143 1959 0 and 10 9.4 CDS 648 "Biosynthesis of cofactors, prosthetic groups and carriers" glutaredoxin 2 b1092 fabD 5783 4658 4792 3016 535 0 and 20 5 9.4 CDS 930 Fatty acid and phospholipid metabolism malonyl-CoA-[acyl-carrier-protein] transacylase b1246 oppD 5772 6862 6838 4944 44 0 and 20 5 9.4 CDS 1014 Transport and binding proteins homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system b1905 ftn 14652 11170 11933 7021 1173 0 and 10 9.4 CDS 498 Transport and binding proteins cytoplasmic ferritin (an iron storage protein) b1929 yedE 3217 1976 1971 1544 532 0 and 10 9.4 CDS 1206 "Hypothetical, unclassified, unknown" putative transport system permease protein b2893 dsbC 2515 2160 1992 1135 -129 0 and 10 5 9.4 CDS 711 Cell structure protein disulfide isomerase II b2989 - 6754 4047 3957 3221 1187 0 and 10 9.4 CDS 915 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0415 ribH 5710 5272 5445 3335 366 0 and 20 5 9.5 CDS 471 "Biosynthesis of cofactors, prosthetic groups and carriers" "riboflavin synthase, beta chain" b0606 ahpF 5121 3780 3261 2478 381 0 and 10 9.5 CDS 1596 "Cell processes (incl. adaptation, protection)" "alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides" b1647 - 12330 7942 8089 5933 1073 0 and 10 9.5 CDS 897 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1836 - 2486 1812 1937 935 164 0 and 10 5 9.5 CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1908 yecA 8373 5322 6211 4051 564 0 and 10 9.5 CDS 666 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3150 yraP 2499 1790 1870 973 -184 0 and 10 5 9.5 CDS 576 "Cell processes (incl. adaptation, protection)" putative periplasmic protein b3915 yiiP 2489 1533 1355 625 -167 0 and 10 5 9.5 CDS 903 "Hypothetical, unclassified, unknown" putative transport system permease protein b0176 yaeL 5627 5456 5182 2861 358 0 and 20 5 9.6 CDS 1353 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0356 adhC 2638 1560 1728 1280 410 0 and 10 9.6 CDS 1110 Energy metabolism "alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent" b0660 ybeZ 3277 2672 2270 1591 170 0 and 10 9.6 CDS 1080 Putative transport proteins putative ATP-binding protein in pho regulon b0740 tolB 5634 4042 4397 3529 1093 0 and 20 5 9.6 CDS 1293 "phage, transposon, or plasmid" periplasmic protein involved in the tonb-independent uptake of group A colicins b1093 fabG 13828 12595 13328 11637 3262 0 and 20 9.6 CDS 735 Fatty acid and phospholipid metabolism 3-oxoacyl-[acyl-carrier-protein] reductase b2787 ygcX 5631 5566 6691 3874 1317 0 and 20 5 9.6 CDS 1341 Carbon compound catabolism putative glucarate dehydratase b3261 fis 1223 880 1725 685 250 5 and 10 5 9.6 CDS 297 "DNA replication, recombination, modification and repair" site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription b3295 rpoA 11509 13639 11348 11246 2696 0 and 20 9.6 CDS 990 "Transcription, RNA processing and degradation" "RNA polymerase, alpha subunit" b3299 rpmJ 17426 15781 15477 19969 4096 0 and 20 9.6 CDS 117 "Translation, post-translational modification" 50S ribosomal subunit protein L36 b3737 atpE 5666 6897 4312 4994 1058 0 and 20 5 9.6 CDS 240 Energy metabolism "membrane-bound ATP synthase, F0 sector, subunit c" b0009 mog 2449 1658 1510 924 324 0 and 10 5 9.7 CDS 588 "Biosynthesis of cofactors, prosthetic groups and carriers" required for the efficient incorporation of molybdate into molybdoproteins b1713 pheT 10919 9336 8778 5329 1739 0 and 10 9.7 CDS 2388 "Translation, post-translational modification" "phenylalanine tRNA synthetase, beta-subunit" b2286 nuoC 15482 10819 9378 7583 621 0 and 10 9.7 CDS 1803 "Hypothetical, unclassified, unknown" "NADH dehydrogenase I chain C, D" b2995 hybB 1378 2051 1479 839 -186 2.5 and 10 5 9.7 CDS 1179 Energy metabolism probable cytochrome Ni/Fe component of hydrogenase-2 b3342 rpsL 17108 16778 18253 15378 4110 0 and 20 9.7 CDS 375 "Translation, post-translational modification" 30S ribosomal subunit protein S12 b3418 malT 2460 3439 1480 718 -51 0 and 10 5 9.7 CDS 2706 Carbon compound catabolism positive regulator of mal regulon b0811 glnH 7047 3769 4620 3462 1671 0 and 10 9.8 CDS 747 Transport and binding proteins periplasmic glutamine-binding protein; permease b1103 ycfF 2441 1868 1285 804 189 0 and 10 5 9.8 CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1209 hemM 2444 1766 1340 824 91 0 and 10 5 9.8 CDS 624 "Biosynthesis of cofactors, prosthetic groups and carriers" "an enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase" b2296 ackA 5439 3647 3192 3159 927 0 and 20 5 9.8 CDS 1203 Energy metabolism acetate kinase b2316 accD 3123 3379 3376 1540 -54 0 and 10 9.8 CDS 915 Fatty acid and phospholipid metabolism "acetylCoA carboxylase, carboxytransferase component, beta subunit" b3233 yhcB 2439 2305 2156 805 154 0 and 10 5 9.8 CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3405 ompR 2441 1593 1501 493 49 0 and 10 5 9.8 CDS 720 Regulatory function "response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis" b3837 - 5722 4288 3403 2828 561 0 and 10 9.8 CDS 342 "Hypothetical, unclassified, unknown" putative histone b3981 secE 4544 3529 4385 2248 328 0 and 10 9.8 CDS 384 Transport and binding proteins preprotein translocase b0115 aceF 5409 7383 4168 6535 832 0 and 20 5 9.9 CDS 1893 Energy metabolism pyruvate dehydrogenase (dihydrolipoyltransacetylase component) b3156 yhbS 2413 1379 1298 1185 259 0 and 10 5 9.9 CDS 504 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3554 yiaF 2420 1997 1579 665 94 0 and 10 5 9.9 CDS 831 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3802 hemY 2421 1737 1694 683 -148 0 and 10 5 9.9 CDS 1197 "Biosynthesis of cofactors, prosthetic groups and carriers" a late step of protoheme IX synthesis b4173 hflX 11212 8863 7258 5563 178 0 and 10 9.9 CDS 1281 "Translation, post-translational modification" GTP - binding subunit of protease specific for phage lambda cII repressor b0093 ftsQ 7419 5028 5732 3699 859 0 and 10 10 CDS 831 "Cell processes (incl. adaptation, protection)" cell division protein; ingrowth of wall at septum b3066 dnaG 2399 1465 1469 1080 41 0 and 10 5 10 CDS 1746 "DNA replication, recombination, modification and repair" DNA biosynthesis; DNA primase b3742 mioC 2995 1806 1997 1494 348 0 and 10 10 CDS 444 "DNA replication, recombination, modification and repair" initiation of chromosome replication b0014 dnaK 5268 3783 5005 5132 841 0 and 20 5 10.1 CDS 1917 "Cell processes (incl. adaptation, protection)" chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins b1248 - 2393 1814 1744 1041 -27 0 and 10 5 10.1 CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2027 wzzB 2382 1476 2219 850 338 0 and 10 5 10.1 CDS 1017 "Hypothetical, unclassified, unknown" regulator of length of O-antigen component of lipopolysaccharide chains b4221 ytfN 2392 1516 2261 519 -435 0 and 10 5 10.1 CDS 3780 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4174 hflK 5139 6000 5985 4066 598 0 and 20 5 10.2 CDS 1260 "Translation, post-translational modification" protease specific for phage lambda cII repressor b1612 fumA 2354 2074 1666 749 130 0 and 10 5 10.3 CDS 1647 Energy metabolism fumarase A = fumarate hydratase Class I; aerobic isozyme b3187 ispB 2349 1505 1443 449 -26 0 and 10 5 10.3 CDS 972 "Biosynthesis of cofactors, prosthetic groups and carriers" octaprenyl diphosphate synthase b3301 rplO 12655 12476 12907 12488 3308 0 and 20 10.3 CDS 435 "Translation, post-translational modification" 50S ribosomal subunit protein L15 b3413 yhgH 2352 1385 1274 453 -115 0 and 10 5 10.3 CDS 732 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3463 ftsE 2361 1637 1300 1070 298 0 and 10 5 10.3 CDS 669 "Cell processes (incl. adaptation, protection)" ATP-binding component of a membrane-associated complex involved in cell division b0928 aspC 5006 3932 4328 3149 1097 0 and 20 5 10.4 CDS 1191 Amino acid biosynthesis and metabolism aspartate aminotransferase b1098 tmk 2339 1355 1222 927 119 0 and 10 5 10.4 CDS 642 Nucleotide biosynthesis and metabolism thymidylate kinase b1214 ychA 2334 1745 1318 621 -299 0 and 10 5 10.4 CDS 810 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3341 rpsG 14670 12970 13422 11529 3844 0 and 20 10.4 CDS 540 "Translation, post-translational modification" "30S ribosomal subunit protein S7, initiates assembly" b3703 rpmH 2337 1488 1907 728 96 0 and 10 5 10.4 CDS 141 "Translation, post-translational modification" 50S ribosomal subunit protein L34 b0170 tsf 4957 4024 4335 2671 549 0 and 20 5 10.5 CDS 852 "Translation, post-translational modification" protein chain elongation factor EF-Ts b1094 acpP 21482 18763 23573 17639 5705 0 and 20 10.5 CDS 237 Fatty acid and phospholipid metabolism acyl carrier protein b2573 rpoE 4971 4351 2835 2823 72 0 and 20 5 10.5 CDS 576 Regulatory function "RNA polymerase, sigma-E factor; heat shock and oxidative stress" b2833 - 1230 938 1673 405 -92 5 and 10 5 10.5 CDS 219 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3601 mtlR 2324 1439 1337 852 -57 0 and 10 5 10.5 CDS 588 Carbon compound catabolism repressor for mtl b1676 pykF 8268 8692 7796 6340 2235 0 and 20 10.6 CDS 1413 Energy metabolism "pyruvate kinase I (formerly F), fructose stimulated" b1780 yeaD 2308 1935 1160 1063 138 0 and 10 5 10.6 CDS 906 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1831 yebJ 2308 2239 2070 849 -150 0 and 10 5 10.6 CDS 120 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1324 tpx 10747 9439 9225 7864 2945 0 and 20 10.7 CDS 507 "Cell processes (incl. adaptation, protection)" thiol peroxidase b2567 rnc 2297 1438 1576 1015 34 0 and 10 5 10.7 CDS 681 "DNA replication, recombination, modification and repair" "RNase III, ds RNA" b2572 rseA 4865 7171 4349 3991 321 0 and 20 5 10.7 CDS 651 Regulatory function "sigma-E factor, negative regulatory protein" b3986 rplL 11286 9469 11707 10544 3095 0 and 20 10.7 CDS 366 "Translation, post-translational modification" 50S ribosomal subunit protein L7/L12 b1128 ycfD 2278 1641 1747 947 21 0 and 10 5 10.8 CDS 1131 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2133 dld 2280 1842 1457 986 257 0 and 10 5 10.8 CDS 1716 Energy metabolism "D-lactate dehydrogenase, FAD protein, NADH independent" b3919 tpiA 9893 7938 8199 5999 2747 0 and 20 10.8 CDS 768 Energy metabolism triosephosphate isomerase b1330 - 258 88 1653 55 -95 5 and 10 5 10.9 CDS 1032 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1603 pntA 4733 4216 2802 2497 415 0 and 20 5 10.9 CDS 1533 Central intermediary metabolism "pyridine nucleotide transhydrogenase, alpha subunit" b1662 ribE 2274 1588 1392 811 -105 0 and 10 5 10.9 CDS 642 "Biosynthesis of cofactors, prosthetic groups and carriers" "riboflavin synthase, alpha chain" b0659 ybeY 2259 2067 1424 876 6 0 and 10 5 11 CDS 468 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1718 infC 16743 17036 19094 16039 4799 0 and 20 11.1 CDS 543 "Translation, post-translational modification" protein chain initiation factor IF-3 b2515 gcpE 2244 1663 1625 586 -181 0 and 10 10 11.1 CDS 1119 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0463 acrA 2238 2186 2035 992 69 0 and 10 10 11.2 CDS 1194 Cell structure acridine efflux pump b0741 pal 4567 3507 3437 2350 893 0 and 20 10 11.2 CDS 522 Cell structure peptidoglycan-associated lipoprotein b2925 fba 11345 8649 8308 7987 3291 0 and 20 11.2 CDS 1080 Energy metabolism "fructose-bisphosphate aldolase, class II" b3107 yhaL 2227 1278 1626 1022 279 0 and 10 10 11.2 CDS 171 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3770 ilvE 4563 4173 3427 4664 1192 0 and 20 10 11.2 CDS 930 Amino acid biosynthesis and metabolism branched-chain amino-acid aminotransferase b0008 talB 15549 14701 13490 10135 4576 0 and 20 11.3 CDS 954 Energy metabolism transaldolase B b0155 yadQ 2221 1196 1207 538 -144 0 and 10 10 11.3 CDS 1422 Putative transport proteins putative channel transporter b1582 - 2216 1290 1546 891 238 0 and 10 10 11.3 CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4179 vacB 4505 3367 2686 2253 322 0 and 20 10 11.3 CDS 2484 "Hypothetical, unclassified, unknown" putative enzyme b0472 recR 1339 1894 2109 768 370 2.5 and 10 10 11.4 CDS 606 "DNA replication, recombination, modification and repair" recombination and repair b2024 hisA 4467 2624 2398 2811 713 0 and 20 10 11.4 CDS 741 Amino acid biosynthesis and metabolism N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase b2251 yfaO 2203 1121 1418 516 -16 0 and 10 10 11.4 CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3751 rbsB 22182 24542 25692 19473 6582 0 and 20 11.4 CDS 891 Transport and binding proteins D-ribose periplasmic binding protein b4151 frdD 2209 2093 1594 753 110 0 and 10 10 11.4 CDS 360 Energy metabolism "fumarate reductase, anaerobic, membrane anchor polypeptide" b0605 ahpC 19939 14404 15839 10581 5989 0 and 20 11.5 CDS 564 "Cell processes (incl. adaptation, protection)" "alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides" b0775 bioB 6554 4204 3760 4691 1964 0 and 20 11.5 CDS 1041 "Biosynthesis of cofactors, prosthetic groups and carriers" "biotin synthesis, sulfur insertion?" b2795 ygdH 4443 5714 3636 2775 150 0 and 20 10 11.5 CDS 1365 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1416 gapC_2 4366 4830 3908 2568 309 0 and 20 10 11.6 CDS 252 Energy metabolism glyceraldehyde-3-phosphate dehydrogenase (second fragment) b2748 - 2185 1199 1555 572 -62 0 and 10 10 11.6 CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0178 hlpA 18794 18455 20254 19481 5730 0 and 20 11.7 CDS 486 Cell structure "histone-like protein, located in outer membrane or nucleoid" b0194 proS 1589 1868 1623 750 149 2.5 and 10 10 11.8 CDS 1719 "Translation, post-translational modification" proline tRNA synthetase b2523 pepB 4302 2987 2686 2763 654 0 and 20 10 11.8 CDS 1371 Central intermediary metabolism putative peptidase b2664 ygaE 4312 2613 2890 3010 1124 0 and 20 10 11.8 CDS 681 Putative regulatory proteins putative transcriptional regulator b3317 rplB 4291 3763 2221 4177 1018 0 and 20 10 11.8 CDS 822 "Translation, post-translational modification" 50S ribosomal subunit protein L2 b0030 yaaF 4272 2514 3036 2906 501 0 and 20 10 11.9 CDS 915 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0171 pyrH 2155 1550 1424 791 -2 0 and 10 10 11.9 CDS 726 Central intermediary metabolism uridylate kinase b0416 nusB 4254 3555 3048 2311 517 0 and 20 10 11.9 CDS 420 "Transcription, RNA processing and degradation" transcription termination; L factor b1109 ndh 4244 7283 4141 4124 460 0 and 20 10 11.9 CDS 1305 Energy metabolism respiratory NADH dehydrogenase b3255 accB 4274 3753 3305 2306 125 0 and 20 10 11.9 CDS 471 Fatty acid and phospholipid metabolism "acetylCoA carboxylase, BCCP subunit; carrier of biotin" b0126 yadF 2142 1552 1441 428 51 0 and 10 10 12 CDS 663 Putative enzymes putative carbonic anhdrase (EC 4.2.1.1) b1288 fabI 4202 4722 3924 2891 883 0 and 20 10 12 CDS 789 Fatty acid and phospholipid metabolism enoyl-[acyl-carrier-protein] reductase (NADH) b1613 manA 4230 3210 2828 2135 355 0 and 20 10 12 CDS 1176 Carbon compound catabolism mannose-6-phosphate isomerase b1623 add 2142 2036 1207 543 -25 0 and 10 10 12 CDS 1002 Nucleotide biosynthesis and metabolism adenosine deaminase b3011 yqhD 2146 1229 1109 857 247 0 and 10 10 12 CDS 1164 Putative enzymes putative oxidoreductase b3191 yrbB 2140 1737 1837 1003 263 0 and 10 10 12 CDS 390 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0784 moaD 4157 3107 3525 4029 757 0 and 20 10 12.1 CDS 246 "Biosynthesis of cofactors, prosthetic groups and carriers" molybdopterin biosynthesis b4354 yjiY 2130 1111 1166 923 65 0 and 10 10 12.1 CDS 2166 "Cell processes (incl. adaptation, protection)" putative carbon starvation protein b1839 - 4138 3596 3520 2539 102 0 and 20 10 12.2 CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1866 aspS 4118 3487 3563 2395 187 0 and 20 10 12.2 CDS 1773 "Translation, post-translational modification" aspartate tRNA synthetase b2029 gnd 26700 24130 25531 23020 8562 0 and 20 12.2 CDS 1407 Energy metabolism "gluconate-6-phosphate dehydrogenase, decarboxylating" b3956 ppc 2117 2514 1363 980 6 0 and 10 10 12.2 CDS 2652 Energy metabolism phosphoenolpyruvate carboxylase b0034 caiF 2108 1122 1582 1000 324 0 and 10 10 12.3 CDS 501 "Cell processes (incl. adaptation, protection)" transcriptional regulator of cai operon b0369 hemB 2116 1318 1108 994 163 0 and 10 10 12.3 CDS 1008 "Biosynthesis of cofactors, prosthetic groups and carriers" 5-aminolevulinate dehydratase = porphobilinogen synthase b1635 gst 2109 1353 1209 477 -135 0 and 10 10 12.3 CDS 606 "Biosynthesis of cofactors, prosthetic groups and carriers" glutathionine S-transferase b4147 efp 2112 1934 2759 970 143 0 and 10 10 12.3 CDS 567 "Translation, post-translational modification" elongation factor P (EF-P) b2702 srlA 15423 17782 19947 18698 5042 0 and 20 12.4 CDS 564 Transport and binding proteins "PTS system, glucitol/sorbitol-specific IIC component, one of two" b3736 atpF 4053 5608 3519 3434 828 0 and 20 10 12.4 CDS 471 Energy metabolism "membrane-bound ATP synthase, F0 sector, subunit b" b1855 msbB 2089 1236 1350 854 52 0 and 10 10 12.5 CDS 972 "Cell processes (incl. adaptation, protection)" "suppressor of htrB, heat shock protein" b3098 yqjD 16074 14979 19794 12572 5405 0 and 20 12.7 CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4023 yjbD 3950 2839 2987 2295 610 0 and 20 10 12.7 CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2543 yphA 2067 1091 1625 650 20 0 and 10 10 12.8 CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2563 acpS 2070 1518 1483 928 78 0 and 10 10 12.8 CDS 381 Fatty acid and phospholipid metabolism CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase b3034 yqiE 2067 1205 1309 573 134 0 and 10 10 12.8 CDS 630 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0177 yaeT 3877 3426 3116 2115 586 0 and 20 10 12.9 CDS 2433 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0237 pepD 3871 3419 3049 2482 322 0 and 20 10 12.9 CDS 1458 "Translation, post-translational modification" aminoacyl-histidine dipeptidase (peptidase D) b0525 ppiB 3870 5235 4499 2425 84 0 and 20 10 13 CDS 495 "Translation, post-translational modification" peptidyl-prolyl cis-trans isomerase B (rotamase B) b0733 cydA 15975 15463 19891 19045 5479 0 and 20 13 CDS 1572 Energy metabolism "cytochrome d terminal oxidase, polypeptide subunit I" b1249 cls 2047 1483 1075 668 -129 0 and 10 10 13 CDS 1461 Fatty acid and phospholipid metabolism "cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity" b0641 rlpB 1345 1785 1465 630 -58 2.5 and 10 10 13.1 CDS 582 Cell structure a minor lipoprotein b2410 yfeH 2044 1074 1091 644 253 0 and 10 10 13.1 CDS 999 Putative enzymes putative cytochrome oxidase b3209 yhbL 3824 3197 3430 2020 34 0 and 20 10 13.1 CDS 663 "Hypothetical, unclassified, unknown" sigma cross-reacting protein 27A (SCRP-27A) b3340 fusA 17701 16517 16903 16734 6129 0 and 20 13.1 CDS 2115 "Translation, post-translational modification" GTP-binding protein chain elongation factor EF-G b4207 fklB 1688 1787 1305 780 317 2.5 and 10 10 13.1 CDS 780 "Translation, post-translational modification" FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) b0707 ybgA 2035 1745 1496 1002 437 0 and 10 10 13.2 CDS 510 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0742 ybgF 3794 2699 2986 2334 241 0 and 20 10 13.2 CDS 792 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3764 yifE 2032 1315 2047 905 389 0 and 10 10 13.2 CDS 339 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0184 dnaE 3773 2826 3057 2085 467 0 and 20 10 13.3 CDS 3483 "DNA replication, recombination, modification and repair" "DNA polymerase III, alpha subunit" b0414 ribD 2028 1432 1191 195 -335 0 and 10 10 13.3 CDS 1104 "Biosynthesis of cofactors, prosthetic groups and carriers" bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis b1865 ntpA 3758 2778 3061 2333 417 0 and 20 10 13.3 CDS 453 Central intermediary metabolism dATP pyrophosphohydrolase b1955 - 2027 1221 1156 843 260 0 and 10 10 13.3 CDS 816 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0025 ribF 3732 2249 2236 2395 1219 0 and 20 10 13.4 CDS 942 Putative regulatory proteins putative regulator b0642 leuS 3734 3875 2287 2145 218 0 and 20 10 13.4 CDS 2583 "Translation, post-translational modification" leucine tRNA synthetase b3783 rho 2016 1725 1045 688 -58 0 and 10 10 13.4 CDS 1260 "Transcription, RNA processing and degradation" transcription termination factor Rho; polarity suppressor b0578 nfnB 3701 2353 1911 1852 341 0 and 20 10 13.5 CDS 654 "Cell processes (incl. adaptation, protection)" oxygen-insensitive NAD(P)H nitroreductase b1325 ycjG 2011 1249 1167 917 134 0 and 10 10 13.5 CDS 1008 Putative enzymes putative muconate cycloisomerase I (EC 5.5.-.-) b1380 ldhA 3703 2582 2690 2130 681 0 and 20 10 13.5 CDS 990 Energy metabolism "fermentative D-lactate dehydrogenase, NAD-dependent" b2315 folC 2012 1162 1226 564 -15 0 and 10 10 13.5 CDS 1269 "Biosynthesis of cofactors, prosthetic groups and carriers" dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase b2520 - 2007 1016 1668 897 8 0 and 10 10 13.5 CDS 4962 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0441 ybaU 2004 1533 1697 953 -37 0 and 10 10 13.6 CDS 1872 "Translation, post-translational modification" putative protease maturation protein b2936 yggG 2001 1208 1134 456 52 0 and 10 10 13.6 CDS 885 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3403 pckA 13393 14330 12019 10927 4849 0 and 20 13.6 CDS 1623 Central intermediary metabolism phosphoenolpyruvate carboxykinase b0902 pflA 1991 1283 1759 508 14 0 and 10 10 13.7 CDS 741 Energy metabolism pyruvate formate lyase activating enzyme 1 b1498 - 19175 15865 17421 17015 6960 0 and 20 13.7 CDS 1716 Putative enzymes putative sulfatase b2314 dedD 1990 1458 1192 536 -141 0 and 10 10 13.7 CDS 636 "Hypothetical, unclassified, unknown" putative lipoprotein b3617 kbl 9429 8070 6575 7387 3424 0 and 20 13.7 CDS 1197 Central intermediary metabolism 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) b0736 ybgC 1987 1082 1153 677 -28 0 and 10 10 13.8 CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2498 upp 1985 1204 1641 991 145 0 and 10 10 13.8 CDS 654 Nucleotide biosynthesis and metabolism uracil phosphoribosyltransferase b2008 yeeA 1977 1377 1161 957 78 0 and 10 10 13.9 CDS 1059 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2781 mazG 3607 2919 3763 2666 199 0 and 20 10 13.9 CDS 792 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2906 visC 3593 2383 2239 1913 280 0 and 20 10 13.9 CDS 1203 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1830 prc 1056 1744 1459 709 196 2.5 and 10 10 14 CDS 2049 "Translation, post-translational modification" carboxy-terminal protease for penicillin-binding protein 3 b2704 srlB 16897 18592 17394 16674 6284 0 and 20 14 CDS 372 Transport and binding proteins "PTS system, glucitol/sorbitol-specific enzyme IIA component" b3178 hflB 3565 4480 3622 2690 423 0 and 20 10 14 CDS 1935 "Cell processes (incl. adaptation, protection)" "degrades sigma32, integral membrane peptidase, cell division protein" b3315 rplV 4879 3710 2577 5103 1808 0 and 20 14 CDS 333 "Translation, post-translational modification" 50S ribosomal subunit protein L22 b3500 gor 3565 3627 2944 2326 578 0 and 20 10 14 CDS 1353 "Biosynthesis of cofactors, prosthetic groups and carriers" glutathione oxidoreductase b2277 nuoM 3644 5221 3669 3354 1362 0 and 20 14.1 CDS 1530 Energy metabolism NADH dehydrogenase I chain M b2528 yfhF 3549 3424 3450 2354 538 0 and 20 10 14.1 CDS 324 "Hypothetical, unclassified, unknown" putative regulator b2529 - 3543 2128 2123 2021 260 0 and 20 10 14.1 CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3123 rnpB -5932 4231 -1303 14048 1789 2.5 and 20 14.1 misc_RNA 377 "untranslated RNA, component of RNase P, involved in RNA processing" b0410 yajD 1953 1352 1703 656 -83 0 and 10 10 14.3 CDS 348 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0965 - 1952 2324 1283 973 465 0 and 10 10 14.3 CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2891 prfB 3505 3476 3230 2463 206 0 and 20 10 14.3 CDS 1098 "Translation, post-translational modification" peptide chain release factor RF-2 b0755 gpmA 9995 9314 14098 7892 3813 0 and 20 14.4 CDS 753 Energy metabolism phosphoglyceromutase 1 b1273 yciN 1942 1354 1755 448 47 0 and 10 10 14.4 CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3024 ygiW 9188 5623 6618 4678 3507 0 and 20 14.4 CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2289 lrhA 1936 1159 1284 468 -98 0 and 10 10 14.5 CDS 939 Energy metabolism "NADH dehydrogenase transcriptional regulator, LysR family" b2295 - 1939 983 1073 609 276 0 and 10 10 14.5 CDS 456 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0735 ybgE 5803 8353 7388 6102 2269 0 and 20 14.8 CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1217 chaB 3380 1854 3656 2243 703 0 and 20 10 14.8 CDS 231 Transport and binding proteins cation transport regulator b1150 ymfR 1912 1572 1048 629 -229 0 and 10 10 14.9 CDS 183 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3294 rplQ 3366 4045 3155 2956 662 0 and 20 10 14.9 CDS 384 "Translation, post-translational modification" 50S ribosomal subunit protein L17 b1219 ychN 3352 2484 2557 1734 922 0 and 20 10 15 CDS 354 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3738 atpB 3352 4687 2826 1908 51 0 and 20 10 15 CDS 816 Energy metabolism "membrane-bound ATP synthase, F0 sector, subunit a" b2489 hyfI 3322 1706 2092 2330 808 0 and 20 10 15.1 CDS 759 Energy metabolism hydrogenase 4 Fe-S subunit b2783 chpR 1903 1994 1570 889 -135 0 and 10 10 15.1 CDS 249 Other known genes "suppressor of inhibitory function of ChpA, PemI-like, autoregulated" b4153 frdB 3328 2830 2299 1715 300 0 and 20 10 15.1 CDS 735 Energy metabolism "fumarate reductase, anaerobic, iron-sulfur protein subunit" b1864 yebC 3293 2132 2528 2144 563 0 and 20 10 15.3 CDS 741 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3316 rpsS 3276 2949 1751 3289 1218 0 and 20 10 15.3 CDS 279 "Translation, post-translational modification" 30S ribosomal subunit protein S19 b0179 lpxD 3270 3719 2545 2245 144 0 and 20 10 15.4 CDS 1026 Cell structure UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; third step of endotoxin (lipidA) synthesis b0354 yaiL 1886 1778 1482 649 -40 0 and 10 10 15.4 CDS 657 "DNA replication, recombination, modification and repair" nucleoprotein/polynucleotide-associated enzyme b1983 - 1884 1375 1817 880 -1 0 and 10 10 15.4 CDS 717 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3795 yifK 1884 1055 1289 695 444 0 and 10 10 15.4 CDS 1386 Putative transport proteins putative amino acid/amine transport protein b1215 kdsA 3238 3440 3057 2763 776 0 and 20 10 15.5 CDS 855 Cell structure 2-dehydro-3-deoxyphosphooctulonate aldolase b2937 speB 3246 3217 3566 3548 1304 0 and 20 10 15.5 CDS 921 Central intermediary metabolism agmatinase b0085 murE 3219 1994 2679 1843 301 0 and 20 10 15.6 CDS 1488 Cell structure meso-diaminopimelate-adding enzyme b0754 aroG 1872 2890 2934 209 34 0 and 10 10 15.6 CDS 1053 Amino acid biosynthesis and metabolism "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)" b2672 ygaM 8167 8296 10176 6750 3353 0 and 20 15.6 CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2562 yfhL 4028 2912 3945 3536 1664 0 and 20 15.7 CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0720 gltA 11776 13682 14503 12467 4894 0 and 20 15.8 CDS 1284 Energy metabolism citrate synthase b1308 pspE 10563 8501 11851 7434 4395 0 and 20 15.8 CDS 315 "phage, transposon, or plasmid" phage shock protein b2450 - 3184 2267 2032 1817 390 0 and 20 10 15.8 CDS 840 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1002 agp 14025 10424 13867 12714 5870 0 and 20 15.9 CDS 1242 Central intermediary metabolism periplasmic glucose-1-phosphatase b3735 atpH 3180 4859 2924 5406 958 0 and 20 10 15.9 CDS 534 Energy metabolism "membrane-bound ATP synthase, F1 sector, delta-subunit" b2513 - 1848 2284 2474 880 -157 0 and 10 10 16.1 CDS 621 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3469 zntA 1847 1235 1146 715 246 0 and 10 10 16.1 CDS 2199 Putative transport proteins zinc-transporting ATPase b0439 lon 3130 2917 3102 1903 465 0 and 20 10 16.2 CDS 2355 Regulatory function "DNA-binding, ATP-dependent protease La; heat shock K-protein" b4214 cysQ 1846 1222 1330 517 291 0 and 10 10 16.2 CDS 741 Central intermediary metabolism affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis b0051 ksgA 1672 1655 1375 495 -160 2.5 and 10 10 16.3 CDS 822 "Cell processes (incl. adaptation, protection)" "S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase" b0259 trs5_1 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b0552 trs5_2 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b0656 trs5_3 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b1331 trs5_4 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b1443 - 3100 2794 2937 2560 804 0 and 20 10 16.3 CDS 795 Putative transport proteins putative transport system permease protein b1994 trs5_6 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b2030 trs5_7 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b2192 trs5_8 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b2708 gutQ 3109 3310 3551 1677 105 0 and 20 10 16.3 CDS 927 Carbon compound catabolism "orf, hypothetical protein" b2982 trs5_9 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b3218 trs5_10 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b3505 trs5_11 1839 1773 1094 900 -281 0 and 10 10 16.3 CDS 1017 IS5 transposase b3349 slyD 3665 3602 3245 2910 1591 0 and 20 16.6 CDS 591 "Translation, post-translational modification" FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) b0655 ybeJ 3037 2101 2172 1773 283 0 and 20 10 16.7 CDS 909 Putative transport proteins putative periplasmic binding transport protein b0889 lrp 1820 1822 1417 868 26 0 and 10 10 16.7 CDS 495 Central intermediary metabolism regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system b2689 - 1816 2038 1174 647 -79 0 and 10 10 16.8 CDS 429 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3390 aroK 3026 2823 2492 2010 80 0 and 20 10 16.8 CDS 723 Amino acid biosynthesis and metabolism shikimate kinase I b1740 nadE 3006 2305 2172 1736 182 0 and 20 10 17 CDS 828 "Biosynthesis of cofactors, prosthetic groups and carriers" "NAD synthetase, prefers NH3 over glutamine" b2879 - 1184 2703 2191 3769 1252 2.5 and 20 10 17 CDS 1395 Structural proteins putative proteoglycan b3712 yieE 1809 1141 1268 821 186 0 and 10 10 17 CDS 762 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1466 narW 2969 1629 2262 2023 606 0 and 20 10 17.2 CDS 696 Energy metabolism "cryptic nitrate reductase 2, delta subunit, assembly function" b1638 pdxH 1798 2207 1174 706 -180 0 and 10 10 17.2 CDS 657 "Biosynthesis of cofactors, prosthetic groups and carriers" pyridoxinephosphate oxidase b3149 yraO 2967 2327 2216 1535 6 0 and 20 10 17.2 CDS 591 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2276 nuoN 5815 6305 4976 4439 2609 0 and 20 17.3 CDS 1278 Energy metabolism NADH dehydrogenase I chain N b0087 mraY 2943 1846 2278 1962 257 0 and 20 10 17.4 CDS 1083 Cell structure phospho-N-acetylmuramoyl-pentapeptide transferase? b0192 cutF 1786 1121 1032 509 -134 0 and 10 10 17.5 CDS 711 "Cell processes (incl. adaptation, protection)" copper homeostasis protein (lipoprotein) b0838 yliJ 2916 2096 2854 1508 436 0 and 20 10 17.6 CDS 633 Putative enzymes putative transferase b0910 cmk 2913 1998 2707 1577 149 0 and 20 10 17.6 CDS 684 Nucleotide biosynthesis and metabolism cytidylate kinase b1181 ycgN 1783 981 3701 870 388 0 and 10 10 17.6 CDS 477 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1236 galU 2919 2265 2966 1484 542 0 and 20 10 17.6 CDS 909 Carbon compound catabolism glucose-1-phosphate uridylyltransferase b0929 ompF 15696 11241 15660 13301 7185 0 and 20 17.7 CDS 1089 Cell structure outer membrane protein 1a (Ia;b;F) b2293 yfbT 2908 3469 2634 2699 529 0 and 20 10 17.7 CDS 669 Putative enzymes putative phosphatase b0131 panD 1773 1147 1276 151 -148 0 and 10 10 17.8 CDS 381 "Biosynthesis of cofactors, prosthetic groups and carriers" aspartate 1-decarboxylase b1054 htrB 1776 1233 1345 724 162 0 and 10 10 17.8 CDS 921 "Cell processes (incl. adaptation, protection)" heat shock protein b0366 tauB 2875 1531 1871 1540 215 0 and 20 10 17.9 CDS 768 Central intermediary metabolism taurine ATP-binding component of a transport system b2700 ygaD 1771 1082 1271 346 98 0 and 10 10 17.9 CDS 498 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0680 glnS 666 1599 1099 585 -102 2.5 and 10 10 18.2 CDS 1665 "Translation, post-translational modification" glutamine tRNA synthetase b1854 pykA 1677 1599 1215 575 260 2.5 and 10 10 18.2 CDS 1443 Energy metabolism "pyruvate kinase II, glucose stimulated" b0926 ycbK 2828 2714 2730 2165 112 0 and 20 10 18.3 CDS 549 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0104 guaC 2814 1943 2253 2006 832 0 and 20 10 18.4 CDS 1044 Nucleotide biosynthesis and metabolism GMP reductase b0474 adk 2824 2939 5313 1636 249 0 and 20 10 18.4 CDS 645 Nucleotide biosynthesis and metabolism adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity b1241 adhE 8147 13640 15882 13252 3840 0 and 20 18.4 CDS 2676 Energy metabolism CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase b3644 yicC 2817 2370 2653 1564 712 0 and 20 10 18.4 CDS 864 Structural proteins putative alpha helix protein b3607 cysE 2802 2492 2117 1629 289 0 and 20 10 18.5 CDS 822 Amino acid biosynthesis and metabolism serine acetyltransferase b0862 artQ 2798 3581 2650 1608 131 0 and 20 10 18.6 CDS 717 Transport and binding proteins arginine 3rd transport system permease protein b0918 kdsB 1629 1589 865 411 -162 2.5 and 10 10 18.6 CDS 747 Cell structure CTP:CMP-3-deoxy-D-manno-octulosonate transferase b1283 osmB 2797 2088 3716 1586 694 0 and 20 10 18.6 CDS 219 "Cell processes (incl. adaptation, protection)" osmotically inducible lipoprotein b1247 oppF 2776 3783 4003 2920 320 0 and 20 10 18.8 CDS 1005 Transport and binding proteins homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system b1637 tyrS 2775 2626 2276 1792 833 0 and 20 10 18.8 CDS 1275 "Translation, post-translational modification" tyrosine tRNA synthetase b2687 ygaG 2759 3021 2368 1917 619 0 and 20 10 18.9 CDS 516 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1850 eda 2754 1559 1564 1557 236 0 and 20 10 19 CDS 642 Central intermediary metabolism 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase b2926 pgk 9975 8428 16797 13022 4805 0 and 20 19 CDS 1164 Energy metabolism phosphoglycerate kinase b2606 rplS 2942 3132 3080 2212 1424 0 and 20 19.1 CDS 348 "Translation, post-translational modification" 50S ribosomal subunit protein L19 b0440 hupB 8075 9479 10111 4433 3932 0 and 20 19.3 CDS 273 "DNA replication, recombination, modification and repair" "DNA-binding protein HU-beta, NS1 (HU-1)" b3100 - 2692 2151 2091 1891 835 0 and 20 10 19.6 CDS 300 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0903 pflB 12293 13052 11671 12162 6121 0 and 20 19.9 CDS 2283 Energy metabolism formate acetyltransferase 1 b2267 elaA 2667 1592 1438 1342 328 0 and 20 10 19.9 CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1199 - 2653 1624 1490 1549 372 0 and 20 10 20 CDS 633 Putative enzymes putative dihydroxyacetone kinase (EC 2.7.1.2) b2530 yfhO 2651 1900 1795 1790 269 0 and 20 10 20 CDS 1239 Central intermediary metabolism putative aminotransferase b1065 yceL 2649 2057 2059 1934 858 0 and 20 10 20.1 CDS 1239 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3428 glgP 2627 2422 2799 2880 464 0 and 20 10 20.3 CDS 2448 Cell structure glycogen phosphorylase b1716 rplT 1181 2381 3037 1450 455 2.5 and 20 10 20.7 CDS 357 "Translation, post-translational modification" "50S ribosomal subunit protein L20, and regulator" b2903 gcvP 2591 3282 2394 2123 403 0 and 20 10 20.7 CDS 2874 Central intermediary metabolism "glycine decarboxylase, P protein of glycine cleavage system" b0897 ycaC 1613 2375 2716 1659 923 2.5 and 20 10 20.8 CDS 627 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3440 yhhX 2578 2526 2646 1986 478 0 and 20 10 20.9 CDS 1038 Putative regulatory proteins putative regulator b3704 rnpA 2574 1767 2351 1600 216 0 and 20 10 20.9 CDS 360 "DNA replication, recombination, modification and repair" "RNase P, protein component; protein C5; processes tRNA, 4.5S RNA" b1282 yciH 2551 1822 2165 2831 743 0 and 20 20 21.2 CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4043 lexA 2551 3050 2544 1483 215 0 and 20 20 21.2 CDS 609 Regulatory function regulator for SOS(lexA) regulon b0123 yacK 2528 1829 1858 2159 725 0 and 20 20 21.5 CDS 1551 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1700 ydiT 2503 1577 1359 1475 253 0 and 20 20 21.8 CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4154 frdA 2426 2943 2521 2530 555 0 and 20 20 23 CDS 1809 Energy metabolism "fumarate reductase, anaerobic, flavoprotein subunit" b1875 yecM 2419 1624 1743 1335 672 0 and 20 20 23.1 CDS 573 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3619 rfaD 2418 2700 1651 2054 435 0 and 20 20 23.1 CDS 933 Cell structure ADP-L-glycero-D-mannoheptose-6-epimerase b1448 - 2396 1779 2075 1508 901 0 and 20 20 23.5 CDS 519 "Cell processes (incl. adaptation, protection)" putative resistance protein b1811 - 2393 1530 1883 1345 230 0 and 20 20 23.5 CDS 180 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2581 yfiF 2391 1474 1697 1795 487 0 and 20 20 23.5 CDS 1038 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1761 gdhA 2382 1457 1680 1737 618 0 and 20 20 23.7 CDS 1344 Amino acid biosynthesis and metabolism NADP-specific glutamate dehydrogenase b2526 hscA 2373 1860 1537 1267 167 0 and 20 20 23.9 CDS 1851 "Cell processes (incl. adaptation, protection)" "heat shock protein, chaperone, member of Hsp70 protein family" b0421 ispA 1632 1491 1162 453 -219 2.5 and 10 20 24.1 CDS 900 "Biosynthesis of cofactors, prosthetic groups and carriers" geranyltranstransferase (farnesyldiphosphate synthase) b1530 marR 2361 1814 2253 1329 456 0 and 20 20 24.1 CDS 378 "Cell processes (incl. adaptation, protection)" multiple antibiotic resistance protein; repressor of mar operon b2878 - 1016 2195 1341 2087 583 2.5 and 20 20 24.1 CDS 3099 Putative enzymes "putative oxidoreductase, Fe-S subunit" b1661 cfa 2354 2164 1782 1327 139 0 and 20 20 24.2 CDS 1149 Fatty acid and phospholipid metabolism cyclopropane fatty acyl phospholipid synthase b0555 ybcS 2346 1322 1417 1593 505 0 and 20 20 24.3 CDS 498 "Hypothetical, unclassified, unknown" bacteriophage lambda lysozyme homolog b2735 ygbI 2345 1456 1378 1291 381 0 and 20 20 24.3 CDS 798 Putative regulatory proteins putative DEOR-type transcriptional regulator b2240 glpT 1098 1488 791 500 -59 2.5 and 10 20 24.4 CDS 1359 Transport and binding proteins sn-glycerol-3-phosphate permease b2773 ygcU 2303 1479 1712 1330 461 0 and 20 20 25.1 CDS 657 "Hypothetical, unclassified, unknown" putative oxidoreductase subunit b2866 - 772 2153 1584 2718 383 2.5 and 20 20 25.1 CDS 2259 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3311 rpsQ 2307 2860 2170 2864 581 0 and 20 20 25.1 CDS 255 "Translation, post-translational modification" 30S ribosomal subunit protein S17 b2262 menB 2301 1398 1468 1632 779 0 and 20 20 25.2 CDS 858 "Biosynthesis of cofactors, prosthetic groups and carriers" dihydroxynaphtoic acid synthetase b0625 ybeH 2269 1252 1838 1974 541 0 and 20 20 25.8 CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2477 nlpB 2271 2299 2143 1138 216 0 and 20 20 25.8 CDS 1038 Membrane proteins lipoprotein-34 b3894 fdoG 2273 2455 2758 3323 249 0 and 20 20 25.8 CDS 3051 Energy metabolism "formate dehydrogenase-O, major subunit" b0841 ybjG 2259 1379 1648 1644 548 0 and 20 20 26.1 CDS 597 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3168 infB 2248 2036 1706 1697 300 0 and 20 20 26.3 CDS 2673 "Translation, post-translational modification" protein chain initiation factor IF-2 b4391 yjjK 1259 1465 780 680 82 2.5 and 10 20 26.3 CDS 1668 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b2605 yfiB 888 1464 1084 571 -164 2.5 and 10 20 26.4 CDS 483 Structural proteins putative outer membrane protein b3166 truB 2233 1734 1299 1877 37 0 and 20 20 26.6 CDS 945 "Translation, post-translational modification" tRNA pseudouridine 5S synthase b0091 murC 2208 1249 1517 1248 213 0 and 20 20 27.2 CDS 1476 Cell structure "L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase" b0466 ybaM 2208 1576 1938 1995 523 0 and 20 20 27.2 CDS 162 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3053 glnE 2202 1326 1319 1328 507 0 and 20 20 27.4 CDS 2841 "Translation, post-translational modification" adenylylating enzyme for glutamine synthetase b3118 tdcA 2199 4269 6389 4176 365 0 and 20 20 27.4 CDS 939 Amino acid biosynthesis and metabolism transcriptional activator of tdc operon b3858 yihD 1253 2065 1827 2493 948 2.5 and 20 20 27.4 CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0705 ybfL 23 852 1363 120 1283 5 and 10 20 27.6 CDS 858 putative receptor protein b1460 ydcC 23 852 1363 120 1283 5 and 10 20 27.6 CDS 1137 putative receptor b3484 yhhI 23 852 1363 120 1283 5 and 10 20 27.6 CDS 1137 putative receptor b0027 lspA 2190 1441 2353 1462 269 0 and 20 20 27.7 CDS 495 Transport and binding proteins prolipoprotein signal peptidase (SPase II) b1702 ppsA 2189 1490 1206 1551 739 0 and 20 20 27.7 CDS 2379 Central intermediary metabolism phosphoenolpyruvate synthase b4202 rpsR 1175 2057 1534 1035 335 2.5 and 20 20 27.7 CDS 228 "Translation, post-translational modification" 30S ribosomal subunit protein S18 b0089 ftsW 2185 1308 1401 1449 21 0 and 20 20 27.8 CDS 1245 "Cell processes (incl. adaptation, protection)" cell division; membrane protein involved in shape determination b1703 ydiA 1630 1449 882 415 -59 2.5 and 10 20 27.8 CDS 834 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3559 glyS 2178 2461 2046 1507 320 0 and 20 20 28 CDS 2070 "Translation, post-translational modification" "glycine tRNA synthetase, beta subunit" b3205 yhbJ 2165 2148 2052 1749 12 0 and 20 20 28.3 CDS 855 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2039 rfbA 2143 1871 1589 1721 216 0 and 20 20 28.9 CDS 882 Central intermediary metabolism glucose-1-phosphate thymidylyltransferase b1571 ydfA 441 957 1354 535 578 5 and 10 20 29.1 CDS 156 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2784 relA 971 1437 742 190 -255 2.5 and 10 20 29.1 CDS 2235 Regulatory function (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor b2343 - 2125 1567 2013 1192 496 0 and 20 20 29.4 CDS 309 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2306 hisP 2110 1072 1118 1367 629 0 and 20 20 29.9 CDS 774 Transport and binding proteins ATP-binding component of histidine transport b3198 yrbI 2103 1689 1312 1289 88 0 and 20 20 30.1 CDS 567 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1958 yedI 1580 1426 1019 245 -251 2.5 and 10 20 30.4 CDS 918 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3893 fdoH 1702 1975 3589 3798 705 2.5 and 20 20 30.5 CDS 903 Energy metabolism "formate dehydrogenase-O, iron-sulfur subunit" b4120 melB 2086 1243 2896 4514 762 0 and 20 20 30.6 CDS 1410 Transport and binding proteins melibiose permease II b0133 panC 987 1424 1388 574 229 2.5 and 10 20 30.7 CDS 852 "Biosynthesis of cofactors, prosthetic groups and carriers" pantothenate synthetase b2242 glpB 1606 1969 2118 1214 589 2.5 and 20 20 30.7 CDS 1260 Energy metabolism "sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit" b2614 grpE 2083 2504 2309 1054 161 0 and 20 20 30.7 CDS 594 "phage, transposon, or plasmid" phage lambda replication; host DNA synthesis; heat shock protein; protein repair b1595 ynfL 2081 1207 1227 1133 346 0 and 20 20 30.8 CDS 894 Putative regulatory proteins putative transcriptional regulator LYSR-type b4362 dnaT 2080 1333 1137 1195 198 0 and 20 20 30.8 CDS 540 "DNA replication, recombination, modification and repair" DNA biosynthesis; primosomal protein i b2768 ygcP 2066 1901 2189 2056 730 0 and 20 20 31.3 CDS 576 Putative regulatory proteins putative anti-terminator regulatory protein b2978 glcF 2064 1337 1125 1212 38 0 and 20 20 31.4 CDS 2286 Putative enzymes glycolate oxidase iron-sulfur subunit b0773 ybhB 2061 2089 1588 1051 348 0 and 20 20 31.5 CDS 477 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1743 spy 2061 1401 1619 1053 530 0 and 20 20 31.5 CDS 486 "Hypothetical, unclassified, unknown" periplasmic protein related to spheroblast formation b2524 yfhJ 1706 1949 1658 1349 106 2.5 and 20 20 31.6 CDS 201 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1413 hrpA 2056 1249 1355 1553 525 0 and 20 20 31.7 CDS 3846 "Transcription, RNA processing and degradation" "helicase, ATP-dependent" b3312 rpmC 2052 1414 1035 1759 529 0 and 20 20 31.8 CDS 192 "Translation, post-translational modification" 50S ribosomal subunit protein L29 b1276 acnA 2045 1630 1803 1226 367 0 and 20 20 32.1 CDS 2676 Energy metabolism aconitate hydrase 1 b4175 hflC 2009 2070 2102 1551 247 0 and 20 20 33.4 CDS 1005 "Translation, post-translational modification" protease specific for phage lambda cII repressor b1048 mdoG 2008 3147 2202 1622 35 0 and 20 20 33.5 CDS 1536 "Cell processes (incl. adaptation, protection)" periplasmic glucans biosynthesis protein b0031 dapB 2005 1071 1368 1644 102 0 and 20 20 33.6 CDS 822 Amino acid biosynthesis and metabolism dihydrodipicolinate reductase b2865 - 2002 1270 1371 1218 725 0 and 20 20 33.7 CDS 780 Cell structure putative lipoprotein b2827 thyA 1997 2159 2446 1808 371 0 and 20 20 33.9 CDS 795 Nucleotide biosynthesis and metabolism thymidylate synthetase b3540 dppF 1213 976 1800 1278 147 5 and 20 20 34.1 CDS 1005 Transport and binding proteins putative ATP-binding component of dipeptide transport system b1782 yeaF 1395 1395 1514 572 -6 2.5 and 10 20 34.9 CDS 747 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4258 valS 875 1395 1130 544 2 2.5 and 10 20 34.9 CDS 2856 "Translation, post-translational modification" valine tRNA synthetase b0090 murG 1964 1183 1452 1284 231 0 and 20 20 35.4 CDS 1068 Cell structure UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase b0870 ybjU 1962 1126 1170 1055 77 0 and 20 20 35.5 CDS 1002 Putative enzymes putative arylsulfatase b3999 yjaG 1535 1389 1174 325 -82 2.5 and 10 20 36 CDS 591 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0779 uvrB 1943 1442 1069 1292 597 0 and 20 20 36.4 CDS 2022 "Transcription, RNA processing and degradation" DNA repair; excision nuclease subunit B b2025 hisF 1942 1469 1399 1119 181 0 and 20 20 36.4 CDS 777 Amino acid biosynthesis and metabolism imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme b0861 artM 864 1380 895 401 39 2.5 and 10 20 37.6 CDS 669 Transport and binding proteins arginine 3rd transport system permease protein b4203 rplI 478 1021 288 454 120 2.5 and 5 20 37.6 CDS 450 "Translation, post-translational modification" 50S ribosomal subunit protein L9 b3785 wzzE 1915 1737 1616 1045 367 0 and 20 20 37.8 CDS 1050 Cell structure putative transport protein b0639 ybeN 1905 1304 1468 1441 539 0 and 20 20 38.3 CDS 642 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2036 glf 1905 1365 1293 1891 98 0 and 20 20 38.3 CDS 1104 "Hypothetical, unclassified, unknown" UDP-galactopyranose mutase b2804 fucU 1902 1461 1340 1195 218 0 and 20 20 38.5 CDS 423 Carbon compound catabolism protein of fucose operon b0922 mukF 1900 1884 1322 1219 343 0 and 20 20 38.6 CDS 1323 "Translation, post-translational modification" mukF protein (killing factor KICB) b0955 - 1892 1806 1352 992 253 0 and 20 20 39.1 CDS 1761 Putative enzymes putative ATP-dependent protease b1084 rne 1883 2692 2594 1168 3 0 and 20 20 39.6 CDS 3186 "DNA replication, recombination, modification and repair" "RNase E, membrane attachment, mRNA turnover, maturation 5S RNA" b2771 ygcS 1884 1004 1287 1438 836 0 and 20 20 39.6 CDS 1410 Putative transport proteins putative transport protein b1036 ycdZ 1882 1114 1140 986 349 0 and 20 20 39.7 CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3809 dapF 1869 2373 1536 1152 524 0 and 20 20 40.5 CDS 828 Amino acid biosynthesis and metabolism diaminopimelate epimerase b0879 ybjZ 1867 1461 1286 1140 352 0 and 20 20 40.6 CDS 1947 Putative transport proteins putative ATP-binding component of a transport system b0420 dxs 1852 1775 1526 1377 252 0 and 20 20 41.6 CDS 1863 Putative enzymes 1-deoxyxylulose-5-phosphate synthase; flavoprotein b0632 dacA 1090 1358 1502 535 -260 2.5 and 10 20 42.6 CDS 1212 Cell structure "D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5" b0636 ybeA 1830 1341 1622 1058 182 0 and 20 20 43.1 CDS 468 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0708 phrB 1829 1628 1498 957 194 0 and 20 20 43.2 CDS 1419 "DNA replication, recombination, modification and repair" deoxyribodipyrimidine photolyase (photoreactivation) b1129 phoQ 1829 1505 3307 1192 139 0 and 20 20 43.2 CDS 1461 Regulatory function sensor protein PhoQ b2935 tktA 917 1354 1147 526 282 2.5 and 10 20 43.7 CDS 1992 Energy metabolism transketolase 1 isozyme b3195 yrbF 1817 1318 1344 1330 367 0 and 20 20 44.1 CDS 810 Putative transport proteins putative ATP-binding component of a transport system b0987 ymcD 1385 868 827 1551 597 10 and 20 20 44.4 CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2714 ascG 1805 1144 1197 1300 296 0 and 20 20 45.1 CDS 1014 Carbon compound catabolism ascBF operon repressor b1035 ycdY 1800 1841 1592 1536 344 0 and 20 20 45.5 CDS 555 "Hypothetical, unclassified, unknown" putative oxidoreductase component b2958 yggN 1800 1150 1633 1351 592 0 and 20 20 45.5 CDS 720 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3251 mreB 1796 2658 2328 1241 215 0 and 20 20 45.8 CDS 1104 Cell structure "regulator of ftsI, penicillin binding protein 3, septation function" b0325 yahK 1790 1215 1642 1057 295 0 and 20 20 46.3 CDS 1050 Putative enzymes putative oxidoreductase b3963 yijC 1790 2023 2974 2455 244 0 and 20 20 46.3 CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2318 truA 1785 1537 2020 1215 273 0 and 20 20 46.8 CDS 813 "Translation, post-translational modification" pseudouridylate synthase I b0978 appC 1775 1082 1349 1523 357 0 and 20 20 47.7 CDS 1545 Energy metabolism "probable third cytochrome oxidase, subunit I" b1444 - 1768 1487 1753 2012 729 0 and 20 20 48.3 CDS 1425 Putative enzymes putative aldehyde dehydrogenase b0181 lpxA 1616 1689 1370 1379 185 2.5 and 20 20 50.3 CDS 789 Cell structure UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis b2040 rfbD 1077 1660 933 989 237 2.5 and 20 20 54.2 CDS 900 Central intermediary metabolism dTDP-6-deoxy-L-mannose-dehydrogenase b3892 fdoI 624 692 1601 1906 223 5 and 20 20 55.4 CDS 636 Energy metabolism "formate dehydrogenase, cytochrome B556 (FDO) subunit" b0801 ybiC 1571 878 1279 505 167 5 and 10 20 55.8 CDS 1086 Putative enzymes putative dehydrogenase b3706 thdF 1342 875 1278 584 -111 5 and 10 20 56.5 CDS 1365 "Cell processes (incl. adaptation, protection)" GTP-binding protein in thiophene and furan oxidation b2512 - 1215 1634 2321 1235 4 2.5 and 20 20 58.3 CDS 1179 Putative enzymes putative dehydrogenase b0174 yaeS 1437 1314 1388 601 -98 2.5 and 10 20 58.4 CDS 762 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0621 dcuC 1733 1626 1530 1527 684 2.5 and 20 20 59.7 CDS 1386 "Hypothetical, unclassified, unknown" transport of dicarboxylates b0066 yabJ 1501 797 1574 1122 533 5 and 20 20 60.9 CDS 699 Putative transport proteins putative ATP-binding component of a transport system b3701 dnaN 808 1305 654 319 -199 2.5 and 10 20 63.2 CDS 1101 "DNA replication, recombination, modification and repair" "DNA polymerase III, beta-subunit" b2617 smpA 1687 1301 1574 546 28 2.5 and 10 20 65.7 CDS 153 Cell structure small membrane protein A b0640 holA 539 1584 1793 1421 351 2.5 and 20 20 68.5 CDS 1032 "DNA replication, recombination, modification and repair" "DNA polymerase III, delta subunit" b3839 yigU 1574 1558 1628 920 85 2.5 and 20 20 75.6 CDS 777 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0628 lipA 1503 1540 1516 792 141 2.5 and 20 20 81.5 CDS 966 "Biosynthesis of cofactors, prosthetic groups and carriers" "lipoate synthesis, sulfur insertion?" b2465 tktB 1500 1532 990 843 191 2.5 and 20 20 84.4 CDS 2004 Energy metabolism transketolase 2 isozyme b0029 lytB 888 493 1487 1275 57 5 and 20 20 91.3 CDS 951 Regulatory function control of stringent response; involved in penicillin tolerance b4403 lasT 1210 1515 1390 1156 364 2.5 and 20 20 91.6 CDS 687 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0471 ybaB 1474 1503 1763 816 189 2.5 and 20 20 97.4 CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3702 dnaA 1645 1484 1122 974 76 2.5 and 20 20 108.5 CDS 1404 "DNA replication, recombination, modification and repair" DNA biosynthesis; initiation of chromosome replication; can be transcription regulator b3031 yqiA 1292 1260 1003 240 -179 2.5 and 10 20 110.3 CDS 582 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4213 cpdB 1401 1472 1060 968 62 2.5 and 20 20 117 CDS 1944 Nucleotide biosynthesis and metabolism 2':3'-cyclic-nucleotide 2'-phosphodiesterase b2130 yehY 1428 1467 1316 963 326 2.5 and 20 20 120.9 CDS 1158 "Hypothetical, unclassified, unknown" putative transport system permease protein b3928 yiiU 1097 1458 2899 2026 712 2.5 and 20 20 128.8 CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0023 rpsT 1528 1251 2307 434 105 2.5 and 10 20 130.1 CDS 264 "Translation, post-translational modification" 30S ribosomal subunit protein S20 b2880 - 184 1453 1141 2145 693 2.5 and 20 20 133.7 CDS 780 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1120 cobB 1396 1450 1807 1540 459 2.5 and 20 20 136.8 CDS 840 "Hypothetical, unclassified, unknown" "putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase" b0097 yacA 751 1245 875 347 -232 2.5 and 10 20 147.9 CDS 588 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0098 secA 985 1436 1685 829 38 2.5 and 20 20 153.7 CDS 2706 Transport and binding proteins preprotein translocase; secretion protein b3811 xerC 982 1435 1371 1251 414 2.5 and 20 20 155 CDS 897 "DNA replication, recombination, modification and repair" "site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division" b2962 yggX 1404 1238 1075 587 43 2.5 and 10 20 176.2 CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3181 greA 1417 1412 2381 996 156 2.5 and 20 20 195.4 CDS 462 "Translation, post-translational modification" transcription elongation factor: cleaves 3' nucleotide of paused mRNA b2205 napG 1387 1409 1471 1130 687 2.5 and 20 20 202.3 CDS 696 Energy metabolism ferredoxin-type protein: electron transfer b3527 yhjJ 956 1228 1328 420 27 2.5 and 10 20 242.9 CDS 1497 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2992 hybE 675 1393 1301 1141 3 2.5 and 20 20 249.9 CDS 489 Energy metabolism member of hyb operon b3860 dsbA 864 1387 806 899 286 2.5 and 20 20 274.3 CDS 627 "Translation, post-translational modification" "protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction" b2037 rfbX 1352 898 898 1342 145 10 and 20 20 616.7 CDS 1248 Cell structure putative O-antigen transporter b3650 spoT 1380 1349 967 770 104 2.5 and 20 20 737.7 CDS 2109 Regulatory function "(p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase" b3997 hemE 1346 1210 1209 490 70 2.5 and 10 20 783.7 CDS 1065 "Biosynthesis of cofactors, prosthetic groups and carriers" uroporphyrinogen decarboxylase b3932 hslV 1324 1337 1021 1378 625 2.5 and 20 20 1615.7 CDS 531 "Translation, post-translational modification" "heat shock protein hslVU, proteasome-related peptidase subunit" b0460 hha 881 879 1204 493 -140 5 and 10 20 2084.6 CDS 219 "Translation, post-translational modification" haemolysin expression modulating protein b0001 thrL -513 -271 -340 -336 -217 - - CDS 66 Amino acid biosynthesis and metabolism thr operon leader peptide b0004 thrC 76 753 913 221 20 - - CDS 1287 Amino acid biosynthesis and metabolism threonine synthase b0005 - -1378 -206 -323 -428 -28 - - CDS 297 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0006 yaaA -73 280 430 133 46 - - CDS 777 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0007 yaaJ 208 -26 -96 400 31 - - CDS 1431 Transport and binding proteins inner membrane transport protein b0010 yaaH -833 108 75 -22 24 - - CDS 567 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0011 - -577 -311 148 -70 72 - - CDS 714 Putative enzymes putative oxidoreductase b0012 htgA 341 -240 -72 29 32 - - CDS 591 "Cell processes (incl. adaptation, protection)" positive regulator for sigma 32 heat shock promoters b0013 yaaI -664 -336 -137 -399 -173 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0016 yi81_1 648 528 526 720 -67 - - CDS 1113 IS186 hypothetical protein b0017 yi82_1 -495 -188 -268 -309 -244 - - CDS 309 IS186 and IS421 hypothetical protein b0018 gef -333 46 111 105 127 - - CDS 210 "Cell processes (incl. adaptation, protection)" Gef protein interferes with membrane function when in excess b0020 nhaR 1298 628 717 281 77 - - CDS 906 Transport and binding proteins transcriptional activator of nhaA b0021 insB_1 435 257 349 418 242 - - CDS 504 IS1 protein InsB b0022 insA_1 -110 192 -30 -130 -117 - - CDS 276 IS1 protein InsA b0024 - -230 28 230 224 68 - - CDS 219 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0028 slpA 1258 1065 1704 1197 -57 - - CDS 450 "Hypothetical, unclassified, unknown" probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase) b0032 carA -65 -29 -136 28 -38 - - CDS 1149 Nucleotide biosynthesis and metabolism "carbamoyl-phosphate synthetase, glutamine (small) subunit" b0033 carB 478 415 500 25 918 - - CDS 3222 Nucleotide biosynthesis and metabolism carbamoyl-phosphate synthase large subunit b0035 caiE 1186 359 749 599 239 - - CDS 612 "Cell processes (incl. adaptation, protection)" possible synthesis of cofactor for carnitine racemase and dehydratase b0036 caiD 14 128 392 -14 5 - - CDS 894 "Cell processes (incl. adaptation, protection)" carnitine racemase b0037 caiC 163 147 260 208 22 - - CDS 1569 "Cell processes (incl. adaptation, protection)" probable crotonobetaine/carnitine-CoA ligase b0038 caiB 261 168 127 -10 -44 - - CDS 1218 "Cell processes (incl. adaptation, protection)" l-carnitine dehydratase b0039 caiA 390 158 123 -43 -96 - - CDS 1143 "Cell processes (incl. adaptation, protection)" probable carnitine operon oxidoreductase b0040 caiT 1745 59 182 -18 17 - - CDS 1515 "Cell processes (incl. adaptation, protection)" probable carnitine transporter b0041 fixA -364 -231 -185 -258 -132 - - CDS 807 Energy metabolism "probable flavoprotein subunit, carnitine metabolism" b0042 fixB -67 -121 -26 -160 -72 - - CDS 942 Energy metabolism "probable flavoprotein subunit, carnitine metabolism" b0043 fixC -78 -87 -33 -109 -141 - - CDS 1287 "Hypothetical, unclassified, unknown" flavoprotein; electron transport b0044 fixX -231 -419 -320 -384 -255 - - CDS 288 Energy metabolism putative ferredoxin b0045 yaaU 1161 720 865 570 145 - - CDS 1332 Transport and binding proteins putative transport protein b0046 yabF -134 -91 -140 -168 -82 - - CDS 531 Putative enzymes putative NAD(P)H oxidoreductase b0047 kefC -608 374 195 -182 -135 - - CDS 1863 Transport and binding proteins "K+ efflux antiporter, glutathione-regulated" b0048 folA 264 -9 76 -432 -439 - - CDS 480 "Biosynthesis of cofactors, prosthetic groups and carriers" dihydrofolate reductase type I; trimethoprim resistance b0050 apaG 1239 1157 891 455 -162 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0052 pdxA 392 404 352 -3 -188 - - CDS 990 "Biosynthesis of cofactors, prosthetic groups and carriers" pyridoxine biosynthesis b0056 yabP 482 449 432 145 -122 - - CDS 651 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0057 yabQ 570 409 722 175 59 - - CDS 159 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0058 yabO 350 199 405 215 70 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0059 hepA 605 422 359 198 59 - - CDS 2907 "Transcription, RNA processing and degradation" probable ATP-dependent RNA helicase b0060 polB -166 -37 -46 -145 -28 - - CDS 2352 "DNA replication, recombination, modification and repair" DNA polymerase II b0061 araD 443 198 431 296 -183 - - CDS 696 Carbon compound catabolism L-ribulose-5-phosphate 4-epimerase b0062 araA 312 232 317 340 113 - - CDS 1503 Carbon compound catabolism L-arabinose isomerase b0063 araB 1126 676 706 723 206 - - CDS 1701 Carbon compound catabolism L-ribulokinase b0064 araC 251 163 139 -94 140 - - CDS 879 Carbon compound catabolism transcriptional regulator for ara operon b0065 yabI 786 426 772 460 2 - - CDS 765 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0067 yabK 258 119 48 66 -98 - - CDS 1611 Putative transport proteins putative transport system permease protein b0068 tbpA -934 -329 -487 -742 -381 - - CDS 984 "Biosynthesis of cofactors, prosthetic groups and carriers" thiamin-binding periplasmic protein b0069 yabN -48 112 -5 0 -120 - - CDS 1656 "Hypothetical, unclassified, unknown" putative transport protein b0070 yabM 1302 261 351 23 -241 - - CDS 1179 Putative transport proteins putative transport protein b0071 leuD 124 -38 88 -7 -173 - - CDS 606 Amino acid biosynthesis and metabolism isopropylmalate isomerase subunit b0072 leuC 859 438 626 563 95 - - CDS 1401 Amino acid biosynthesis and metabolism 3-isopropylmalate isomerase (dehydratase) subunit b0073 leuB -68 67 -30 -123 -39 - - CDS 1095 Amino acid biosynthesis and metabolism 3-isopropylmalate dehydrogenase b0074 leuA 28 126 137 -34 -49 - - CDS 1572 Amino acid biosynthesis and metabolism 2-isopropylmalate synthase b0075 leuL 909 1191 1345 892 488 - - CDS 87 Amino acid biosynthesis and metabolism leu operon leader peptide b0076 leuO -155 -50 -78 -170 -164 - - CDS 1122 Amino acid biosynthesis and metabolism probable transcriptional activator for leuABCD operon b0077 ilvI 303 230 125 -70 -127 - - CDS 1815 Amino acid biosynthesis and metabolism "acetolactate synthase III, valine sensitive, large subunit" b0078 ilvH 101 -96 -119 -189 -216 - - CDS 492 Amino acid biosynthesis and metabolism "acetolactate synthase III, valine sensitive, small subunit" b0079 fruL -674 -406 -414 -417 -262 - - CDS 87 Energy metabolism fruR leader peptide b0080 fruR 1265 750 419 42 -223 - - CDS 1005 Energy metabolism transcriptional repressor of fru operon and others b0086 murF 1169 1112 1391 667 109 - - CDS 1359 Cell structure D-alanine:D-alanine-adding enzyme b0088 murD 1514 1148 1294 1317 205 - - CDS 1317 Cell structure UDP-N-acetylmuramoylalanine-D-glutamate ligase b0099 mutT -231 136 167 -62 -131 - - CDS 390 Nucleotide biosynthesis and metabolism "7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions" b0100 - -23 401 396 -4 -139 - - CDS 135 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0102 yacF 506 523 586 158 -173 - - CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0103 yacE 206 416 445 65 -194 - - CDS 621 "DNA replication, recombination, modification and repair" putative DNA repair protein b0105 - -81 -124 -119 -134 -112 - - CDS 108 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0106 hofC 787 462 472 168 60 - - CDS 1203 Cell structure "putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" b0107 hofB -1093 -652 -669 -730 -520 - - CDS 1386 Cell structure "putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" b0108 ppdD 464 -272 -352 -101 -200 - - CDS 441 Other known genes prelipin peptidase dependent protein b0109 nadC -145 50 -15 -197 -185 - - CDS 894 "Biosynthesis of cofactors, prosthetic groups and carriers" quinolinate phosphoribosyltransferase b0110 ampD 1631 900 393 -141 -289 - - CDS 552 "Cell processes (incl. adaptation, protection)" regulates ampC b0112 aroP 265 205 169 79 34 - - CDS 1374 Transport and binding proteins aromatic amino acid transport protein b0113 pdhR -277 52 -4 -439 -262 - - CDS 765 Energy metabolism transcriptional regulator for pyruvate dehydrogenase complex b0117 yacH -283 -151 -235 -190 -122 - - CDS 1854 "Hypothetical, unclassified, unknown" putative membrane protein b0120 speD 94 281 132 113 -54 - - CDS 795 Central intermediary metabolism S-adenosylmethionine decarboxylase b0121 speE 267 368 10 10 -208 - - CDS 867 Central intermediary metabolism spermidine synthase = putrescine aminopropyltransferase b0122 yacC 605 422 332 -49 -217 - - CDS 471 Putative transport proteins "orf, hypothetical protein" b0124 gcd -449 -135 -321 -505 -379 - - CDS 2391 Carbon compound catabolism glucose dehydrogenase b0127 yadG 769 968 795 499 12 - - CDS 927 Putative transport proteins putative ATP-binding component of a transport system b0128 yadH -10 113 19 -128 -81 - - CDS 771 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0129 yadI 783 336 231 -7 -183 - - CDS 441 Putative enzymes putative PTS enzyme II B component b0130 yadE -109 -40 -10 -59 -92 - - CDS 1230 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0132 yadD 16 -30 -183 -175 -182 - - CDS 903 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0135 yadC -382 -232 -341 -257 -200 - - CDS 1239 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0136 yadK -359 -243 -273 -284 -210 - - CDS 597 "Cell processes (incl. adaptation, protection)" putative fimbrial protein b0137 yadL -430 -277 -317 -351 -205 - - CDS 606 "Cell processes (incl. adaptation, protection)" putative fimbrial protein b0138 yadM -482 -203 -303 -318 -202 - - CDS 612 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0139 htrE -133 -214 -205 -14 -101 - - CDS 2598 Cell structure probable outer membrane porin protein involved in fimbrial assembly b0140 ecpD -753 -380 -455 -439 -232 - - CDS 741 Cell structure probable pilin chaperone similar to PapD b0141 yadN -382 -246 -274 -201 -133 - - CDS 585 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0142 folK -283 -115 -186 -117 -130 - - CDS 480 "Biosynthesis of cofactors, prosthetic groups and carriers" "7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase" b0143 pcnB 379 361 326 127 -135 - - CDS 1365 "Transcription, RNA processing and degradation" poly(A) polymerase I b0144 yadB -325 20 -142 -253 -81 - - CDS 927 "Translation, post-translational modification" putative tRNA synthetase b0147 yadP -182 -82 -195 -248 -230 - - CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0148 hrpB 1143 633 522 344 -41 - - CDS 2475 "Transcription, RNA processing and degradation" "helicase, ATP-dependent" b0149 mrcB 762 741 846 491 268 - - CDS 2535 Cell structure peptidoglycan synthetase; penicillin-binding protein 1B b0150 fhuA 864 520 270 169 226 - - CDS 2244 Cell structure "outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80" b0152 fhuD 344 153 108 224 -45 - - CDS 891 Transport and binding proteins "hydroxamate-dependent iron uptake, cytoplasmic membrane component" b0153 fhuB 1277 525 865 750 275 - - CDS 1983 Transport and binding proteins "hydroxamate-dependent iron uptake, cytoplasmic membrane component" b0154 hemL 153 448 422 -73 -355 - - CDS 1281 "Biosynthesis of cofactors, prosthetic groups and carriers" glutamate-1-semialdehyde aminotransferase (aminomutase) b0157 yadS -570 -338 -370 -692 -504 - - CDS 624 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0158 yadT -748 -185 -430 -651 -307 - - CDS 801 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0159 pfs 1067 970 820 302 -65 - - CDS 699 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0160 dgt -702 -118 -425 -488 -581 - - CDS 1518 Central intermediary metabolism deoxyguanosine triphosphate triphosphohydrolase b0161 htrA 375 382 520 291 234 - - CDS 1425 "Translation, post-translational modification" periplasmic serine protease Do; heat shock protein HtrA b0164 yaeI 347 307 378 32 -107 - - CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0165 - 421 495 581 73 -66 - - CDS 132 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0167 glnD 355 272 231 60 -170 - - CDS 2673 Amino acid biosynthesis and metabolism protein PII; uridylyltransferase acts on regulator of glnA b0173 yaeM 1187 1149 1189 662 115 - - CDS 1197 Putative transport proteins putative ATP-binding component of a transport system b0175 cdsA 612 896 578 3 -275 - - CDS 750 Fatty acid and phospholipid metabolism CDP-diglyceride synthetase b0182 lpxB 228 447 216 58 -206 - - CDS 1149 Cell structure "tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step" b0183 rnhB 1149 1036 1109 1070 160 - - CDS 597 "DNA replication, recombination, modification and repair" "RNAse HII, degrades RNA of DNA-RNA hybrids" b0185 accA 1131 1300 1401 745 212 - - CDS 960 Fatty acid and phospholipid metabolism "acetylCoA carboxylase, carboxytransferase component, alpha subunit" b0187 yaeR 1027 555 275 181 -117 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0188 mesJ 1677 1085 931 1138 258 - - CDS 1299 "Cell processes (incl. adaptation, protection)" cell cycle protein b0189 yaeO 138 244 206 -264 -71 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0193 yaeF -155 -163 -240 -105 -179 - - CDS 879 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0195 yaeB 515 369 348 440 -63 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0196 rcsF 1299 802 814 208 -182 - - CDS 405 Cell structure regulator in colanic acid synthesis; interacts with RcsB b0197 yaeC 1723 1126 1478 487 117 - - CDS 816 Cell structure putative lipoprotein b0198 yaeE -47 15 -60 -205 -123 - - CDS 654 Membrane proteins putative transport system permease protein b0199 abc -564 -168 -4 -167 -199 - - CDS 1032 Transport and binding proteins ATP-binding component of a transporter b0207 yafB 700 350 579 401 -59 - - CDS 804 Central intermediary metabolism putative aldose reductase (EC 1.1.1.21) b0208 yafC -196 -26 -88 -347 -397 - - CDS 915 Putative regulatory proteins putative transcriptional regulator LYSR-type b0209 yafD 462 248 -26 -252 -286 - - CDS 801 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0210 yafE 40 355 226 -29 -198 - - CDS 624 Putative enzymes putative biotin synthesis protein b0211 dniR -15 472 553 -238 -259 - - CDS 1359 Energy metabolism transcriptional regulator for nitrite reductase (cytochrome c552) b0212 gloB 558 207 402 166 -75 - - CDS 756 "Hypothetical, unclassified, unknown" probable hydroxyacylglutathione hydrolase b0213 yafS 624 409 220 178 -210 - - CDS 741 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0214 rnhA 1116 581 588 299 -86 - - CDS 468 "DNA replication, recombination, modification and repair" "RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication" b0215 dnaQ 341 170 284 -150 -254 - - CDS 732 "DNA replication, recombination, modification and repair" "DNA polymerase III, epsilon subunit" b0217 yafT -545 -373 -386 -350 -217 - - CDS 786 Central intermediary metabolism putative aminopeptidase b0218 yafU -355 -236 -222 -275 -188 - - CDS 339 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0219 yafV 432 3 -90 -167 -400 - - CDS 771 Central intermediary metabolism putative EC 3.5. amidase-type enzyme b0221 yafH 123 165 -98 94 -174 - - CDS 2481 Central intermediary metabolism putative acyl-CoA dehydrogenase (EC 1.3.99.-) b0223 yafJ 1093 967 718 464 -92 - - CDS 768 Central intermediary metabolism putative amidotransferase b0224 yafK 1109 561 755 206 -196 - - CDS 741 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0225 yafQ 1223 357 247 120 -141 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0227 yafL 381 144 143 12 16 - - CDS 750 "Hypothetical, unclassified, unknown" putative lipoprotein b0228 yafM 1219 524 262 162 -47 - - CDS 498 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0229 fhiA -1739 -955 -859 -866 -450 - - CDS 1740 "Cell processes (incl. adaptation, protection)" flagellar biosynthesis b0230 mbhA 330 25 75 100 42 - - CDS 786 "Cell processes (incl. adaptation, protection)" putative motility protein b0231 dinP 665 170 58 64 -51 - - CDS 1056 "Hypothetical, unclassified, unknown" damage-inducible protein P; putative tRNA synthetase b0232 yafN -131 -117 -271 -351 -232 - - CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0233 yafO -285 -209 -261 -191 -201 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0234 yafP 91 84 -11 -13 6 - - CDS 453 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0235 - 149 68 14 10 -15 - - CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0236 prfH -487 -352 -341 -522 -350 - - CDS 501 "Translation, post-translational modification" probable peptide chain release factor b0239 yafA 75 234 -31 -234 -336 - - CDS 1245 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0241 phoE -153 0 -37 -90 -115 - - CDS 1056 Cell structure "outer membrane pore protein E (E,Ic,NmpAB)" b0242 proB 723 477 488 200 -174 - - CDS 1104 Amino acid biosynthesis and metabolism gamma-glutamate kinase b0243 proA -211 -90 -223 -208 -121 - - CDS 1254 Amino acid biosynthesis and metabolism gamma-glutamylphosphate reductase b0245 - -866 -557 -631 -708 -414 - - CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0246 yafW 542 284 558 550 143 - - CDS 318 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0247 ykfG -202 -212 -208 -1 -342 - - CDS 477 "DNA replication, recombination, modification and repair" putative DNA repair protein b0248 yafX -633 -237 -354 -311 -237 - - CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0249 ykfF 560 393 538 412 197 - - CDS 240 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0250 ykfB 471 129 166 -90 -109 - - CDS 468 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0251 yafY 39 -93 -69 -89 -236 - - CDS 858 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0252 yafZ -255 -64 -152 4 -128 - - CDS 837 "phage, transposon, or plasmid" "orf, hypothetical protein" b0253 ykfA -196 41 187 -93 -14 - - CDS 867 "Hypothetical, unclassified, unknown" putative GTP-binding protein b0254 perR 778 387 391 280 47 - - CDS 894 Putative regulatory proteins putative transcriptional regulator LYSR-type b0255 yi91a 306 326 334 -16 61 - - CDS 405 "Hypothetical, unclassified, unknown" "IS911 hypothetical protein, variant (IS911A)" b0256 tra8_1 -32 102 -15 62 -124 - - CDS 1152 IS30 transposase b0257 - 104 253 136 -41 -169 - - CDS 426 "phage, transposon, or plasmid" putative transposase b0258 ykfC -85 -143 -70 -183 -93 - - CDS 1131 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0260 ykfD 585 411 380 129 -35 - - CDS 1428 Central intermediary metabolism putative amino acid/amine transport protein b0261 yagD 1054 80 60 -133 -245 - - CDS 933 Cell structure putative enzyme b0262 afuC -361 -340 -357 -397 -313 - - CDS 1059 Central intermediary metabolism putative ATP-binding component of a transport system b0263 - -475 34 -33 -164 -114 - - CDS 363 Putative transport proteins putative transport system permease protein b0264 insB_2 435 257 349 418 242 - - CDS 504 IS1 protein InsB b0265 insA_2 -60 223 6 -115 -113 - - CDS 276 IS1 protein InsA b0266 yagB -378 -192 -318 -333 -142 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0267 yagA 807 559 393 587 95 - - CDS 1155 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0268 yagE 499 70 69 69 -149 - - CDS 930 Central intermediary metabolism putative lyase/synthase b0269 yagF 1445 826 880 803 316 - - CDS 1968 Amino acid biosynthesis and metabolism putative dehydratase b0270 yagG 553 -83 -99 -63 -53 - - CDS 1383 Carbon compound catabolism putative permease b0271 yagH 402 284 204 330 64 - - CDS 1611 Carbon compound catabolism putative beta-xylosidase (EC 3.2.1.37) b0272 yagI 420 242 164 252 196 - - CDS 759 Putative regulatory proteins putative regulator b0273 argF 93 -129 -219 155 -191 - - CDS 1005 Amino acid biosynthesis and metabolism "ornithine carbamoyltransferase 2, chain F" b0274 insB_3 435 257 349 418 242 - - CDS 504 IS1 protein InsB b0275 insA_3 -60 223 6 -115 -113 - - CDS 276 IS1 protein InsA b0276 yagJ -167 -111 -137 -250 -191 - - CDS 732 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0277 yagK -241 -186 -222 -163 -111 - - CDS 627 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0278 yagL -448 -211 -307 -310 -178 - - CDS 699 Putative regulatory proteins DNA-binding protein b0279 yagM -389 -218 -238 -193 -151 - - CDS 855 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0280 yagN 928 297 98 363 -140 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0281 intF -241 -88 -165 -207 -203 - - CDS 1401 "phage, transposon, or plasmid" putative phage integrase b0282 yagP -319 -197 -251 -182 -155 - - CDS 411 "Hypothetical, unclassified, unknown" putative transcriptional regulator LYSR-type b0283 yagQ -949 -658 -772 -620 -488 - - CDS 957 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0284 yagR -697 -196 -380 -467 -135 - - CDS 2199 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0285 yagS -198 241 257 22 247 - - CDS 957 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0286 yagT -852 -555 -615 -655 -414 - - CDS 690 Central intermediary metabolism putative xanthine dehydrogenase (EC 1.1.1.20) b0287 yagU 1279 516 541 -63 -156 - - CDS 615 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0288 ykgJ -127 107 -95 -48 -197 - - CDS 330 Energy metabolism putative ferredoxin b0289 yagV -609 -300 -455 -454 -276 - - CDS 756 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0290 yagW 28 85 -152 -4 -162 - - CDS 1644 Putative regulatory proteins putative receptor b0291 yagX 197 109 149 413 38 - - CDS 2526 "Hypothetical, unclassified, unknown" putative enzyme b0292 yagY -276 -103 -131 -60 -127 - - CDS 669 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0293 yagZ -460 -272 -369 -396 -240 - - CDS 588 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0294 ykgK -577 -320 -400 -434 -255 - - CDS 591 Putative regulatory proteins putative regulator b0295 ykgL -418 -228 -307 -265 -108 - - CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0296 ykgM -531 -323 -311 -314 -207 - - CDS 264 "Translation, post-translational modification" putative ribosomal protein b0297 eaeH -156 -44 -48 -58 -138 - - CDS 888 Structural proteins "attaching and effacing protein, pathogenesis factor" b0298 - 513 149 249 467 25 - - CDS 309 putative factor b0299 tra5_5 512 24 330 565 -109 - - CDS 867 IS3 putative transposase b0300 ykgA 3377 4720 4020 2900 -134 - - CDS 720 Putative regulatory proteins putative ARAC-type regulatory protein b0301 ykgB -324 -206 -261 -244 -228 - - CDS 603 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0302 - -256 -78 -164 17 -73 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0303 ykgI -435 -271 -321 -302 -251 - - CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0304 ykgC 6 68 4 28 -97 - - CDS 1353 "Cell processes (incl. adaptation, protection)" putative oxidoreductase b0305 ykgD 208 147 -77 -85 -152 - - CDS 855 Putative regulatory proteins putative ARAC-type regulatory protein b0309 - -458 -190 -342 -420 -188 - - CDS 213 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0310 ykgH -409 -245 -311 -302 -207 - - CDS 669 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0311 betA 91 -47 -25 -252 -116 - - CDS 1671 "Cell processes (incl. adaptation, protection)" "choline dehydrogenase, a flavoprotein" b0312 betB -302 -277 -464 -589 -400 - - CDS 1473 "Cell processes (incl. adaptation, protection)" NAD+-dependent betaine aldehyde dehydrogenase b0313 betI 200 108 -99 -200 -287 - - CDS 588 "Cell processes (incl. adaptation, protection)" probably transcriptional repressor of bet genes b0314 betT 1098 488 669 375 86 - - CDS 2034 Transport and binding proteins high-affinity choline transport b0315 yahA 343 153 77 133 -100 - - CDS 1089 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0316 yahB -364 -231 -320 -314 -273 - - CDS 933 Putative regulatory proteins putative transcriptional regulator LYSR-type b0317 yahC -709 -303 -461 -708 -476 - - CDS 498 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0318 yahD 468 242 298 358 -157 - - CDS 606 Putative regulatory proteins putative transcription factor b0319 yahE 52 -6 -47 73 -73 - - CDS 864 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0320 yahF -73 -17 -212 -206 -73 - - CDS 1548 "Hypothetical, unclassified, unknown" putative oxidoreductase subunit b0321 yahG -124 -100 -209 -96 -109 - - CDS 1419 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0323 yahI -642 -290 -238 -521 -215 - - CDS 951 Putative enzymes putative kinase (EC 2.7.2.2). b0324 yahJ -864 -392 -601 -432 -517 - - CDS 1383 Putative enzymes putative deaminase b0326 yahL -826 -481 -537 -498 -308 - - CDS 816 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0327 yahM -280 -119 -180 -206 -55 - - CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0328 yahN 1022 215 144 -153 -120 - - CDS 672 Energy metabolism putative cytochrome subunit of dehydrogenase b0330 prpR -1037 -545 -652 -690 -346 - - CDS 1587 Putative regulatory proteins regulator for prp operon b0331 prpB 75 124 183 -12 -22 - - CDS 891 Central intermediary metabolism putative phosphonomutase 2 b0332 - 109 2 62 -9 -158 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0333 prpC 109 -90 -89 -162 -142 - - CDS 1170 Central intermediary metabolism putative citrate synthase; propionate metabolism? b0334 prpD -677 -393 -435 -460 -248 - - CDS 1452 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0335 prpE 537 287 386 194 48 - - CDS 1887 "Hypothetical, unclassified, unknown" putative propionyl-CoA synthetase b0336 codB -413 -227 -464 -393 -299 - - CDS 1260 Transport and binding proteins cytosine permease/transport b0337 codA -205 74 -293 -286 -151 - - CDS 1284 Nucleotide biosynthesis and metabolism cytosine deaminase b0338 cynR -96 0 -95 -155 -211 - - CDS 900 Carbon compound catabolism cyn operon positive regulator b0339 cynT 156 8 208 196 2 - - CDS 660 Central intermediary metabolism carbonic anhydrase b0340 cynS -699 -369 -448 -462 -287 - - CDS 471 Central intermediary metabolism "cyanate aminohydrolase, cyanase" b0341 cynX -494 -174 -398 -397 -276 - - CDS 1155 Transport and binding proteins cyanate transport b0342 lacA 297 8 -112 -223 -186 - - CDS 612 Carbon compound catabolism thiogalactoside acetyltransferase b0345 lacI -69 163 169 225 -88 - - CDS 1083 Carbon compound catabolism transcriptional repressor of the lac operon b0346 mhpR 160 284 88 -303 -69 - - CDS 948 Putative regulatory proteins transcriptional regulator for mhp operon b0347 mhpA 1279 426 408 554 -29 - - CDS 1665 "Hypothetical, unclassified, unknown" 3-(3-hydroxyphenyl)propionate hydroxylase b0348 mhpB -1249 -907 -796 -870 -529 - - CDS 945 Carbon compound catabolism "2,3-dihydroxyphenylpropionate 1,2-dioxygenase" b0349 mhpC 128 -69 -67 -71 -102 - - CDS 930 Carbon compound catabolism "2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" b0350 mhpD -873 -554 -582 -819 -510 - - CDS 816 Putative enzymes 2-keto-4-pentenoate hydratase b0351 mhpF 539 92 175 174 -24 - - CDS 951 Carbon compound catabolism acetaldehyde dehydrogenase b0352 mhpE 245 123 -3 106 -133 - - CDS 1014 Carbon compound catabolism 4-hydroxy-2-ketovalerate aldolase b0353 mhpT 40 51 -55 -217 -257 - - CDS 1257 Putative transport proteins putative transport protein b0355 yaiM -75 22 -28 -51 -23 - - CDS 834 Central intermediary metabolism putative esterase (EC 3.1.1.1) b0357 yaiN 1521 1181 1070 528 117 - - CDS 297 Structural proteins putative alpha helix chain b0358 yaiO 206 409 654 112 192 - - CDS 774 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0359 - -544 -285 -350 -395 -194 - - CDS 444 "Hypothetical, unclassified, unknown" putative transferase b0360 yi21_1 1239 171 504 317 -8 - - CDS 411 IS2 hypothetical protein b0362 - -166 -129 -197 -85 -234 - - CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0363 yaiP -209 -60 -28 -40 -98 - - CDS 1197 Cell structure polysaccharide metabolism b0364 yaiS -339 -199 -169 -161 -99 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0365 tauA -133 -125 -17 -57 -153 - - CDS 1020 Putative transport proteins taurine transport system periplasmic protein b0367 tauC 745 269 787 543 62 - - CDS 828 Putative transport proteins taurine transport system permease protein b0368 tauD -591 -300 -641 -289 -240 - - CDS 852 "Hypothetical, unclassified, unknown" "taurine dioxygenase, 2-oxoglutarate-dependent" b0370 - -420 -236 -399 -288 -203 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0371 yaiT -239 -140 -146 -165 -134 - - CDS 1461 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0372 tra5_1 512 24 330 565 -109 - - CDS 867 IS3 putative transposase b0373 - 513 149 249 467 25 - - CDS 309 putative factor b0374 yaiU -406 -239 -59 -271 -220 - - CDS 1404 Putative enzymes putative flagellin structural protein b0375 yaiV -609 -316 -326 -427 -231 - - CDS 669 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0376 yaiH 1182 712 587 489 -68 - - CDS 1158 "Hypothetical, unclassified, unknown" putative enzyme b0377 sbmA -266 -142 -255 -179 -200 - - CDS 1221 "Cell processes (incl. adaptation, protection)" "sensitivity to microcin B17, possibly envelop protein" b0378 yaiW -350 -34 -703 -276 -157 - - CDS 1095 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0379 - -444 -245 -349 -330 -168 - - CDS 309 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0380 - 1109 441 250 18 -147 - - CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0381 ddlA 174 281 98 -92 -225 - - CDS 1095 Cell structure D-alanine-D-alanine ligase A b0383 phoA -271 159 99 -161 -149 - - CDS 1485 Central intermediary metabolism alkaline phosphatase b0385 yaiC 487 339 393 385 142 - - CDS 1116 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0386 proC 646 593 612 507 -216 - - CDS 810 Amino acid biosynthesis and metabolism pyrroline-5-carboxylate reductase b0387 yaiI 603 529 623 328 -152 - - CDS 579 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0388 aroL 225 426 320 163 -330 - - CDS 525 Amino acid biosynthesis and metabolism shikimate kinase II b0390 aroM -76 -113 -76 -63 -126 - - CDS 678 Amino acid biosynthesis and metabolism "protein of aro operon, regulated by aroR" b0392 - -239 -161 -146 -209 -76 - - CDS 282 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0393 yaiD 596 343 555 148 -14 - - CDS 912 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0396 araJ -770 -503 -550 -674 -510 - - CDS 1185 Carbon compound catabolism involved in either transport or processing of arabinose polymers b0397 sbcC 619 477 777 413 225 - - CDS 3147 "Transcription, RNA processing and degradation" ATP-dependent dsDNA exonuclease b0398 sbcD 535 436 439 422 63 - - CDS 1203 "Transcription, RNA processing and degradation" ATP-dependent dsDNA exonuclease b0399 phoB -20 145 32 -156 -191 - - CDS 690 Regulatory function "positive response regulator for pho regulon, sensor is PhoR (or CreC)" b0400 phoR -278 -48 -18 -296 -248 - - CDS 1296 Regulatory function positive and negative sensor protein for pho regulon b0401 brnQ 6 13 147 -142 -151 - - CDS 1320 Transport and binding proteins branched chain amino acid transport system II carrier protein b0402 proY 85 122 248 78 -56 - - CDS 1374 "Hypothetical, unclassified, unknown" proline permease transport protein b0403 malZ 1118 922 932 760 78 - - CDS 1818 Carbon compound catabolism maltodextrin glucosidase b0404 yajB 1502 950 1213 681 377 - - CDS 582 Cell structure putative glycoprotein b0405 queA -23 184 254 -81 -253 - - CDS 1071 "Translation, post-translational modification" synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase b0408 secD 401 705 559 20 -210 - - CDS 1848 Transport and binding proteins "protein secretion; membrane protein, part of the channel" b0409 secF 209 1018 777 40 -122 - - CDS 972 Transport and binding proteins "protein secretion, membrane protein" b0412 yajI -422 -5 -341 -399 -224 - - CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0417 thiL 1379 1004 997 1138 539 - - CDS 978 Putative regulatory proteins thiamin-monophosphate kinase b0418 pgpA 550 439 172 -104 -362 - - CDS 519 "Hypothetical, unclassified, unknown" phosphatidylglycerophosphatase b0423 yajK 892 573 561 571 -40 - - CDS 1449 "Hypothetical, unclassified, unknown" putative oxidoreductase b0424 thiJ 1001 688 584 287 -341 - - CDS 597 "Hypothetical, unclassified, unknown" 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis b0425 apbA 1377 593 345 110 -45 - - CDS 912 "Hypothetical, unclassified, unknown" "involved in thiamin biosynthesis, alternative pyrimidine biosynthesis" b0427 yajR 540 260 331 463 -45 - - CDS 1371 "Cell processes (incl. adaptation, protection)" putative transport protein b0428 cyoE 1628 1144 1123 810 297 - - CDS 891 Energy metabolism protoheme IX farnesyltransferase (haeme O biosynthesis) b0429 cyoD 668 410 216 15 -154 - - CDS 330 Energy metabolism cytochrome o ubiquinol oxidase subunit IV b0430 cyoC 1209 1098 764 797 206 - - CDS 615 Energy metabolism cytochrome o ubiquinol oxidase subunit III b0433 ampG -62 86 12 -109 -85 - - CDS 1476 "Cell processes (incl. adaptation, protection)" regulates beta-lactamase synthesis b0434 yajG 645 774 807 126 -162 - - CDS 681 Putative enzymes putative polymerase/proteinase b0442 ybaV 1618 836 1205 609 103 - - CDS 372 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0443 ybaW 315 197 158 -33 -84 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0444 ybaX 2058 1966 2649 1044 -71 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0445 ybaE 539 106 155 42 120 - - CDS 1701 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0446 cof -436 -266 -304 -420 -247 - - CDS 831 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0447 ybaO -191 -291 -360 -266 -322 - - CDS 546 Putative regulatory proteins putative LRP-like transcriptional regulator b0448 mdlA -303 -174 -311 -456 -276 - - CDS 1773 Transport and binding proteins ATP-binding component of a transport system b0449 mdlB 1472 976 1021 980 112 - - CDS 1782 Transport and binding proteins putative ATP-binding component of a transport system b0450 glnK -597 -284 -362 -306 -261 - - CDS 339 Central intermediary metabolism nitrogen regulatory protein P-II 2 b0451 amtB -260 12 -7 -248 -185 - - CDS 1287 Central intermediary metabolism probable ammonium transporter b0452 tesB -217 51 -275 -327 -333 - - CDS 861 Fatty acid and phospholipid metabolism acyl-CoA thioesterase II b0453 ybaY 1229 782 552 270 128 - - CDS 573 Cell structure glycoprotein/polysaccharide metabolism b0454 ybaZ -56 -12 -109 -33 -58 - - CDS 390 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0455 ffs 1420 1132 2827 1390 1595 - - misc_RNA 138 "untranslated 4.5S RNA, ribosome associated, protein synthesis/export" b0456 ybaA 801 349 432 610 103 - - CDS 354 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0457 ylaB 736 292 390 340 175 - - CDS 1557 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0459 ylaD 246 330 286 326 43 - - CDS 552 "Hypothetical, unclassified, unknown" putative transferase b0461 ybaJ 754 283 438 105 -148 - - CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0464 acrR 55 -100 -86 -109 -183 - - CDS 648 "Cell processes (incl. adaptation, protection)" acrAB operon repressor b0465 aefA 756 672 772 512 78 - - CDS 3363 Structural proteins putative alpha helix protein b0467 priC 1255 745 818 351 -125 - - CDS 528 "DNA replication, recombination, modification and repair" primosomal replication protein N'' b0468 ybaN 96 1 8 -111 -170 - - CDS 378 "phage, transposon, or plasmid" putative gene 58 b0469 apt 610 595 974 95 101 - - CDS 552 Nucleotide biosynthesis and metabolism adenine phosphoribosyltransferase b0470 dnaX 205 660 724 201 -363 - - CDS 1932 "DNA replication, recombination, modification and repair" "DNA polymerase III, tau and gamma subunits; DNA elongation factor III" b0473 htpG -174 24 102 -76 -44 - - CDS 1875 "Cell processes (incl. adaptation, protection)" "chaperone Hsp90, heat shock protein C 62.5" b0475 hemH 1755 874 996 501 -70 - - CDS 963 "Biosynthesis of cofactors, prosthetic groups and carriers" ferrochelatase: final enzyme of heme biosynthesis b0476 ybaC 232 232 258 141 -159 - - CDS 960 Fatty acid and phospholipid metabolism putative lipase (EC 3.1.1.-) b0477 gsk -56 73 293 -36 -165 - - CDS 1305 Nucleotide biosynthesis and metabolism inosine-guanosine kinase b0478 ybaL 1009 837 605 323 -114 - - CDS 1677 Transport and binding proteins putative transport protein b0479 fsr -11 77 163 94 -206 - - CDS 1221 "Cell processes (incl. adaptation, protection)" fosmidomycin resistance protein b0481 ybaK -257 -41 251 -219 -251 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0482 ybaP 1589 652 858 591 175 - - CDS 795 Central intermediary metabolism putative ligase b0483 ybaQ 701 235 339 -48 -154 - - CDS 396 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0484 ybaR -191 261 392 395 -151 - - CDS 2505 Transport and binding proteins putative ATPase b0487 ybbI 597 411 31 -185 -300 - - CDS 408 "Cell processes (incl. adaptation, protection)" putative transcriptional regulator b0488 ybbJ 710 657 741 156 -317 - - CDS 456 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0489 ybbK 471 41 183 -282 -165 - - CDS 918 Membrane proteins putative protease b0491 ybbM -312 32 -252 -325 -218 - - CDS 807 Putative transport proteins putative metal resistance protein b0492 ybbN 1214 1080 887 916 113 - - CDS 891 Energy metabolism putative thioredoxin-like protein b0493 ybbO 697 1183 989 603 76 - - CDS 810 Putative enzymes putative oxidoreductase b0494 tesA 1074 988 683 400 66 - - CDS 627 Fatty acid and phospholipid metabolism acyl-CoA thioesterase I; also functions as protease I b0495 ybbA 91 122 215 -62 -166 - - CDS 687 Transport and binding proteins putative ATP-binding component of a transport system b0496 ybbP 1210 711 571 487 134 - - CDS 2415 Putative enzymes putative oxidoreductase b0497 rhsD -621 -249 -369 -421 -270 - - CDS 4281 "Hypothetical, unclassified, unknown" rhsD protein in rhs element b0498 ybbC -597 -311 -421 -412 -230 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0499 - -382 -262 -291 -242 -199 - - CDS 711 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0500 ybbD -393 -154 -215 -182 -150 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0501 - -377 -162 -103 -252 -264 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0502 - -1035 -568 -658 -822 -436 - - CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0503 ybbB 1601 1336 1769 1903 818 - - CDS 1095 Structural proteins putative capsule anchoring protein b0504 ybbS -209 -217 -231 -97 -235 - - CDS 927 Putative regulatory proteins putative transcriptional regulator LYSR-type b0505 ybbT 375 233 29 194 49 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0506 ybbU 279 112 152 -377 -175 - - CDS 816 Putative regulatory proteins putative regulator b0507 gcl -497 -271 -290 -318 -208 - - CDS 1782 Central intermediary metabolism glyoxylate carboligase b0508 gip 252 534 724 759 252 - - CDS 777 Central intermediary metabolism glyoxylate-induced protein b0509 ybbQ -515 -218 -439 -385 -315 - - CDS 879 Putative enzymes putative oxidoreductase b0510 ybbV -275 -210 -346 -144 -155 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0511 ybbW -834 -520 -567 -581 -239 - - CDS 1314 Putative transport proteins putative transport protein b0512 ybbX -335 -185 -203 -189 -211 - - CDS 1362 Central intermediary metabolism putative hydrolase b0513 ybbY -599 -181 5 -191 -118 - - CDS 1308 Putative transport proteins putative transport b0514 ybbZ 1178 645 944 566 333 - - CDS 1146 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0515 ylbA 26 22 343 -33 -62 - - CDS 786 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0516 ylbB 236 403 506 312 33 - - CDS 1236 Putative enzymes putative hydantoin utilization protein b0517 ylbC -571 -321 1 -328 -157 - - CDS 1050 Central intermediary metabolism putative malate dehydrogenase (EC 1.1.1.37) b0518 fdrA 860 620 800 546 141 - - CDS 1668 Putative enzymes involved in protein transport; multicopy suppressor of dominant negative ftsH mutants b0519 ylbE -852 -383 -470 -452 -334 - - CDS 1002 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0520 ylbF -164 -71 -118 -55 14 - - CDS 816 Putative enzymes putative carboxylase b0521 arcC 594 220 119 149 -132 - - CDS 894 Central intermediary metabolism putative carbamate kinase (EC 2.7.2.2) b0522 purK -268 -86 -157 -294 -254 - - CDS 1068 Nucleotide biosynthesis and metabolism "phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit" b0523 purE -327 -125 -121 -197 -297 - - CDS 510 Nucleotide biosynthesis and metabolism "phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit" b0524 ybbF 399 484 520 198 164 - - CDS 723 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0526 cysS 944 490 576 751 140 - - CDS 1386 "Translation, post-translational modification" cysteine tRNA synthetase b0527 ybcI 1042 512 445 719 47 - - CDS 522 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0528 ybcJ -602 -302 -455 -545 -445 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0529 folD 218 479 234 -154 -293 - - CDS 867 "Biosynthesis of cofactors, prosthetic groups and carriers" "5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase" b0530 sfmA -603 -362 -349 -434 -251 - - CDS 576 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0531 sfmC -109 -43 -61 -11 8 - - CDS 693 Putative chaperones putative chaperone b0532 sfmD -435 -284 -328 -308 -171 - - CDS 2604 Cell structure "putative outer membrane protein, export function" b0533 sfmH -342 -235 -179 -227 -130 - - CDS 978 "Cell processes (incl. adaptation, protection)" involved in fimbrial asembly b0534 sfmF -474 -260 -220 -387 -216 - - CDS 516 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0535 fimZ -525 -322 -375 -408 -248 - - CDS 633 Cell structure fimbrial Z protein; probable signal transducer b0537 intD -393 -115 -288 -491 -386 - - CDS 1164 "phage, transposon, or plasmid" prophage DLP12 integrase b0538 - -43 -24 -54 5 -23 - - CDS 561 Putative regulatory proteins putative sensory transduction regulator b0539 - 538 218 403 501 303 - - CDS 264 putative exonuclease (EC 3.1.11.3) similar to lambda b0540 - 513 149 249 467 25 - - CDS 309 "orf, hypothetical protein" b0541 tra5_2 512 24 330 565 -109 - - CDS 867 IS3 putative transposase b0542 - 216 11 125 -55 -157 - - CDS 138 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0543 emrE 276 286 130 212 65 - - CDS 333 "Hypothetical, unclassified, unknown" methylviologen resistance b0544 ybcK -390 -167 -246 -176 -110 - - CDS 1527 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0545 ybcL -397 -200 -280 -355 -192 - - CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0546 ybcM 95 87 200 18 -111 - - CDS 798 "Translation, post-translational modification" putative ARAC-type regulatory protein b0547 ybcN -154 -122 -81 -59 -95 - - CDS 456 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0548 ninE -457 -199 -276 -283 -178 - - CDS 171 "Hypothetical, unclassified, unknown" similar to phage 82 and lambda proteins b0549 ybcO 521 588 520 205 33 - - CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0550 rus -358 -241 -239 -235 -214 - - CDS 363 "Hypothetical, unclassified, unknown" endodeoxyribonuclease RUS (Holliday junction resolvase) b0551 ybcQ -394 -218 -231 -227 -179 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0554 ybcR -495 -396 -299 -302 -246 - - CDS 216 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0556 ybcT -534 -314 -412 -371 -205 - - CDS 462 bacteriophage lambda endopeptidase homolog b0557 ybcU -528 -296 -316 -322 -209 - - CDS 294 "Hypothetical, unclassified, unknown" bacteriophage lambda Bor protein homolog b0558 ybcV -416 -231 -312 -247 -208 - - CDS 453 Cell structure putative an envelop protein b0559 ybcW -480 -209 -183 -329 -232 - - CDS 207 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0560 nohB 65 119 87 274 182 - - CDS 546 bacteriophage DNA packaging protein b0561 ybcX -93 44 73 -275 44 - - CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0562 ybcY -532 -302 -368 -537 -256 - - CDS 432 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0563 ylcE -1147 -456 -514 -785 -286 - - CDS 186 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0564 appY -316 -199 -237 -320 -195 - - CDS 750 Central intermediary metabolism regulatory protein affecting appA and other genes b0566 envY -524 -301 -345 -357 -219 - - CDS 762 Cell structure envelope protein; thermoregulation of porin biosynthesis b0567 ybcH -72 -76 -115 137 -122 - - CDS 891 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0568 nfrA -398 -214 -292 -245 -313 - - CDS 2973 "phage, transposon, or plasmid" "bacteriophage N4 receptor, outer membrane protein" b0569 nfrB -471 -187 -536 -320 -230 - - CDS 2238 "phage, transposon, or plasmid" "bacteriophage N4 receptor, outer membrane protein" b0570 ybcZ -1079 -432 -526 -823 -572 - - CDS 1443 Putative regulatory proteins putative 2-component sensor protein b0571 ylcA 462 343 229 280 -54 - - CDS 684 Putative regulatory proteins putative 2-component transcriptional regulator b0572 ylcB -308 -157 -260 -233 -211 - - CDS 1374 Putative transport proteins putative resistance protein b0573 ylcC -795 -419 -388 -490 -354 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0574 ylcD -329 -163 -314 -563 -235 - - CDS 1224 Putative transport proteins putative resistance protein b0575 ybdE -767 -455 -518 -531 -352 - - CDS 3144 Putative transport proteins putative inner membrane component for iron transport b0576 pheP -354 -282 -329 -291 -254 - - CDS 1377 Transport and binding proteins phenylalanine-specific transport system b0577 ybdG 0 65 45 -118 -211 - - CDS 1248 Putative transport proteins putative transport b0579 ybdF 557 81 -268 -139 -382 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0580 ybdJ -569 -272 -382 -397 -329 - - CDS 249 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0581 ybdK 895 415 172 238 -5 - - CDS 1119 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0582 yi81_2 648 528 526 720 -67 - - CDS 1113 IS186 hypothetical protein b0583 entD -326 -175 -181 -177 -139 - - CDS 630 "Biosynthesis of cofactors, prosthetic groups and carriers" "enterochelin synthetase, component D" b0584 fepA 991 426 517 646 406 - - CDS 2241 Transport and binding proteins outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D b0585 fes 800 379 392 536 282 - - CDS 1125 Transport and binding proteins enterochelin esterase b0586 entF -645 -413 -519 -469 -390 - - CDS 3882 "Biosynthesis of cofactors, prosthetic groups and carriers" ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F) b0587 fepE -51 24 -65 -9 -72 - - CDS 1134 Transport and binding proteins ferric enterobactin (enterochelin) transport b0588 fepC -784 -330 -709 -651 -468 - - CDS 816 Transport and binding proteins ATP-binding component of ferric enterobactin transport b0589 fepG -478 -310 -432 -422 -317 - - CDS 993 Transport and binding proteins ferric enterobactin transport protein b0590 fepD -780 -434 -512 -406 -488 - - CDS 1005 Transport and binding proteins ferric enterobactin (enterochelin) transport b0591 ybdA -387 -143 106 -295 -307 - - CDS 1251 Putative transport proteins putative transport b0592 fepB -556 -335 -232 -317 -193 - - CDS 957 Transport and binding proteins ferric enterobactin (enterochelin) binding protein; periplasmic component b0593 entC 152 228 78 46 -46 - - CDS 1176 "Biosynthesis of cofactors, prosthetic groups and carriers" "isochorismate hydroxymutase 2, enterochelin biosynthesis" b0594 entE 281 363 335 239 34 - - CDS 1611 "Biosynthesis of cofactors, prosthetic groups and carriers" "2,3-dihydroxybenzoate-AMP ligase" b0595 entB 147 296 212 46 -88 - - CDS 858 "Biosynthesis of cofactors, prosthetic groups and carriers" "2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase" b0596 entA -46 173 89 -25 165 - - CDS 747 "Biosynthesis of cofactors, prosthetic groups and carriers" "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis" b0597 ybdB -567 -345 -441 -515 -300 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0599 ybdH 439 126 -17 -457 -334 - - CDS 1089 Central intermediary metabolism putative oxidoreductase b0600 ybdL 76 -96 -117 -261 -113 - - CDS 1161 Central intermediary metabolism putative aminotransferase b0601 ybdM -243 -171 -235 -284 -222 - - CDS 630 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0602 ybdN -117 -31 -19 -81 -35 - - CDS 1221 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0603 ybdO -578 -264 -298 -319 -210 - - CDS 903 Putative regulatory proteins putative transcriptional regulator LYSR-type b0604 dsbG 1722 941 1025 474 146 - - CDS 807 Energy metabolism thiol:disulfide interchange protein b0608 ybdR 483 181 196 50 -71 - - CDS 1239 Central intermediary metabolism putative oxidoreductase b0609 - -373 -144 -275 -298 -241 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0610 rnk 431 405 630 212 -42 - - CDS 411 Central intermediary metabolism regulator of nucleoside diphosphate kinase b0612 ybdS 64 148 34 131 45 - - CDS 1464 Cell structure putative a membrane protein b0613 citG -808 -368 -525 -576 -334 - - CDS 879 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0614 ybdU -623 -334 -392 -456 -201 - - CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0615 citF -209 7 -157 -110 16 - - CDS 1533 Putative enzymes citrate lyase alpha chain b0616 citE -569 -199 -260 -382 -132 - - CDS 924 Putative enzymes citrate lyase beta chain (acyl lyase subunit) b0617 citD -359 -197 -266 -247 -250 - - CDS 297 Energy metabolism citrate lyase acyl carrier protein (gamma chain) b0618 citC -550 -247 -324 -303 -199 - - CDS 1146 Putative enzymes citrate lyase synthetase (citrate (pro-3S)-lyase ligase b0619 citA -599 -334 -340 -368 -268 - - CDS 1659 Putative regulatory proteins putative sensor-type protein b0620 citB 35 31 -13 -49 -145 - - CDS 681 Putative regulatory proteins sequence similarity to Shigella regulator b0622 crcA -459 -291 -336 -292 -294 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0624 crcB 5 70 40 -41 -27 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0626 ybeM -544 -351 -519 -583 -447 - - CDS 564 Putative enzymes putative amidase b0627 ybeC 463 602 1347 -132 -151 - - CDS 204 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0629 ybeF -377 -225 -208 -292 -238 - - CDS 801 "Hypothetical, unclassified, unknown" putative transcriptional regulator LYSR-type b0630 lipB 376 350 535 282 -60 - - CDS 576 "Biosynthesis of cofactors, prosthetic groups and carriers" protein of lipoate biosynthesis b0631 ybeD 746 570 952 522 24 - - CDS 264 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0633 rlpA -428 248 147 -507 -365 - - CDS 1089 Membrane proteins a minor lipoprotein b0634 mrdB 1254 784 806 615 66 - - CDS 1113 Cell structure rod shape-determining membrane protein; sensitivity to radiation and drugs b0635 mrdA -322 -25 -98 -39 -178 - - CDS 1902 Cell structure "cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2" b0637 ybeB 823 753 817 125 -180 - - CDS 210 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0638 phpB -296 -116 -27 -12 -166 - - CDS 612 "Biosynthesis of cofactors, prosthetic groups and carriers" "homolog of Salmonella cobC, a phosphohistidine protein" b0644 ybeQ 5 -91 -130 -50 -125 - - CDS 984 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0645 ybeR -588 -319 -365 -413 -196 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0646 ybeS 158 118 131 181 62 - - CDS 1428 Putative enzymes putative enzyme of polynucleotide modification b0647 ybeT -534 -280 -336 -238 -167 - - CDS 555 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0648 ybeU 193 325 365 261 136 - - CDS 708 "Translation, post-translational modification" putative tRNA ligase b0649 ybeV -491 -163 -163 -183 -221 - - CDS 1452 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0650 ybeW 158 169 53 69 -59 - - CDS 1671 "DNA replication, recombination, modification and repair" putative dnaK protein b0652 gltL 465 474 444 303 -60 - - CDS 726 Transport and binding proteins ATP-binding protein of glutamate/aspartate transport system b0653 gltK -259 118 -218 -376 -515 - - CDS 675 Transport and binding proteins glutamate/aspartate transport system permease b0654 gltJ 546 581 586 457 460 - - CDS 741 Transport and binding proteins glutamate/aspartate transport system permease b0657 lnt 892 682 658 714 125 - - CDS 1539 Transport and binding proteins "apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane" b0661 yleA -166 288 261 8 -160 - - CDS 1425 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0662 yleB 1609 1150 1119 595 34 - - CDS 1176 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0663 - -513 -271 -340 -336 -217 - - CDS 336 "Hypothetical, unclassified, unknown" putative RNA b0667 - -551 -155 -230 -249 -203 - - CDS 138 "Hypothetical, unclassified, unknown" putative RNA b0669 - -546 -174 -291 -517 -369 - - CDS 120 "Hypothetical, unclassified, unknown" putative RNA b0671 - -245 -115 -204 -273 -171 - - CDS 153 "Hypothetical, unclassified, unknown" putative RNA b0674 asnB 26 71 6 -221 -83 - - CDS 1665 Amino acid biosynthesis and metabolism asparagine synthetase B b0675 nagD 1036 755 633 -220 -457 - - CDS 753 Central intermediary metabolism N-acetylglucosamine metabolism b0681 ybfM -2 -192 -228 -76 -182 - - CDS 1407 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0682 ybfN 306 359 371 526 -76 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0685 ybfE -2512 -1427 -1484 -2316 -1161 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0686 ybfF -69 34 -35 -136 -204 - - CDS 765 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0688 pgm 744 1065 1118 468 -382 - - CDS 1641 Carbon compound catabolism phosphoglucomutase b0689 ybfP -1578 -828 -935 -906 -522 - - CDS 495 Central intermediary metabolism putative pectinase b0690 ybfG -451 -252 -271 -309 -219 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0691 ybfH -674 -389 -464 -392 -290 - - CDS 318 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0692 potE -919 -563 -476 -722 -310 - - CDS 1320 Transport and binding proteins putrescine transport protein b0693 speF -748 -259 -378 -365 -184 - - CDS 2199 Central intermediary metabolism "ornithine decarboxylase isozyme, inducible" b0694 kdpE 402 394 224 218 -226 - - CDS 678 Regulatory function regulator of kdp operon (transcriptional effector) b0695 kdpD 766 157 161 203 64 - - CDS 2685 Regulatory function sensor for high-affinity potassium transport system b0696 kdpC 1184 538 541 642 254 - - CDS 573 Transport and binding proteins high-affinity potassium transport system b0697 kdpB -1014 -547 -598 -685 -375 - - CDS 2049 Transport and binding proteins "ATPase of high-affinity potassium transport system, B chain" b0698 kdpA 226 30 -111 1 -151 - - CDS 1674 Transport and binding proteins "ATPase of high-affinity potassium transport system, A chain" b0700 rhsC 483 286 483 464 383 - - CDS 4194 "Hypothetical, unclassified, unknown" rhsC protein in rhs element b0701 - 215 197 137 343 353 - - CDS 222 protein in rhs element b0702 ybfB -287 -274 -241 -161 -150 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0703 - -540 -325 -366 -306 -123 - - CDS 1434 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0704 ybfC -187 -67 -100 45 -66 - - CDS 570 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0706 ybfD -371 -179 -248 -216 -206 - - CDS 762 putative DNA ligase b0709 ybgH 1125 620 510 874 198 - - CDS 1482 Transport and binding proteins putative transport protein b0711 ybgJ 1484 593 707 124 -217 - - CDS 657 Central intermediary metabolism putative carboxylase b0712 ybgK 575 642 467 136 -267 - - CDS 933 Central intermediary metabolism putative carboxylase b0713 ybgL 17 633 471 -102 -265 - - CDS 735 Carbon compound catabolism putative lactam utilization protein b0714 nei 1745 1239 1407 1558 414 - - CDS 792 "DNA replication, recombination, modification and repair" endonuclease VIII and DNA N-glycosylase with an AP lyase activity b0715 abrB -480 135 -110 -317 -129 - - CDS 1092 Putative transport proteins putative transport protein b0716 ybgO -444 -198 -249 -264 -199 - - CDS 1089 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0717 ybgP -258 -149 -215 -227 -72 - - CDS 729 Putative chaperones putative chaperone b0718 ybgQ 756 356 289 1138 169 - - CDS 2457 Central intermediary metabolism putative outer membrane protein b0719 ybgD -525 -318 -353 -219 -243 - - CDS 567 "Cell processes (incl. adaptation, protection)" putative fimbrial-like protein b0721 sdhC 538 395 148 143 -97 - - CDS 390 Energy metabolism "succinate dehydrogenase, cytochrome b556" b0724 sdhB 1563 725 756 -108 -95 - - CDS 717 Energy metabolism "succinate dehydrogenase, iron sulfur protein" b0730 farR 222 178 63 -79 -135 - - CDS 723 Energy metabolism transcriptional regulator of succinylCoA synthetase operon b0731 hrsA -994 -494 -560 -682 -396 - - CDS 1977 "Translation, post-translational modification" "protein modification enzyme, induction of ompC" b0732 ybgG -388 -270 -319 -387 -308 - - CDS 2634 Carbon compound catabolism putative sugar hydrolase b0737 tolQ 1595 1206 1755 1084 36 - - CDS 693 "phage, transposon, or plasmid" "inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins" b0738 tolR 804 994 1145 714 55 - - CDS 429 "phage, transposon, or plasmid" "putative inner membrane protein, involved in the tonB-independent uptake of group A colicins" b0739 tolA 926 686 728 502 0 - - CDS 1266 "phage, transposon, or plasmid" "membrane spanning protein, required for outer membrane integrity" b0750 nadA -58 38 -107 -151 -127 - - CDS 1044 "Biosynthesis of cofactors, prosthetic groups and carriers" "quinolinate synthetase, A protein" b0751 pnuC 151 197 64 -54 -225 - - CDS 720 Transport and binding proteins required for NMN transport b0752 ybgR -174 -52 -139 -236 -211 - - CDS 942 Putative transport proteins putative transport system permease protein b0753 - 622 707 795 501 285 - - CDS 381 "Hypothetical, unclassified, unknown" putative homeobox protein b0760 modF 733 564 486 359 148 - - CDS 1473 "DNA replication, recombination, modification and repair" ATP-binding component of molybdate transport system b0761 modE -451 -236 -300 -371 -277 - - CDS 789 Transport and binding proteins molybdate uptake regulatory protein b0762 - 66 -95 -29 -488 -340 - - CDS 150 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0763 modA 846 590 612 638 216 - - CDS 774 Transport and binding proteins molybdate-binding periplasmic protein; permease b0764 modB -105 -203 -267 -190 -215 - - CDS 690 Transport and binding proteins molybdate transport permease protein b0765 modC -515 -239 -473 -445 -270 - - CDS 1059 Transport and binding proteins ATP-binding component of molybdate transport b0766 ybhA -109 200 91 -166 -190 - - CDS 819 Central intermediary metabolism putative phosphatase b0768 ybhD -739 -354 -273 -519 -268 - - CDS 1017 Putative regulatory proteins putative transcriptional regulator LYSR-type b0769 ybhH -351 -195 -234 -277 -170 - - CDS 1053 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0770 ybhI -686 -345 -506 -434 -383 - - CDS 1434 Putative transport proteins putative membrane pump protein b0771 ybhJ -55 -132 -247 -126 -119 - - CDS 2286 "Hypothetical, unclassified, unknown" putative enzyme b0772 ybhC -355 74 -24 -216 -200 - - CDS 1284 Central intermediary metabolism putative pectinesterase b0774 bioA 606 389 574 501 10 - - CDS 1290 "Biosynthesis of cofactors, prosthetic groups and carriers" "7,8-diaminopelargonic acid synthetase" b0776 bioF -352 -154 -245 -239 -6 - - CDS 1155 "Biosynthesis of cofactors, prosthetic groups and carriers" 8-amino-7-oxononanoate synthase b0778 bioD 1336 989 776 754 362 - - CDS 678 "Biosynthesis of cofactors, prosthetic groups and carriers" dethiobiotin synthetase b0780 ybhK 1232 824 889 476 -39 - - CDS 909 Structural proteins putative structural protein b0781 moaA -1253 -676 -772 -904 -534 - - CDS 990 "Biosynthesis of cofactors, prosthetic groups and carriers" "molybdopterin biosynthesis, protein A" b0782 moaB 508 484 558 299 -35 - - CDS 513 "Biosynthesis of cofactors, prosthetic groups and carriers" "molybdopterin biosynthesis, protein B" b0783 moaC 737 424 504 435 -108 - - CDS 486 "Biosynthesis of cofactors, prosthetic groups and carriers" "molybdopterin biosynthesis, protein C" b0785 moaE 692 401 403 297 48 - - CDS 453 "Biosynthesis of cofactors, prosthetic groups and carriers" "molybdopterin converting factor, subunit 2" b0787 ybhM -517 -313 -216 -307 -235 - - CDS 714 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0788 ybhN -460 -269 -301 -361 -206 - - CDS 957 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0789 ybhO 122 232 160 -74 -80 - - CDS 1242 Central intermediary metabolism putative synthetase b0790 ybhP 558 253 432 84 -125 - - CDS 762 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0791 ybhQ 1170 396 347 74 -170 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0792 ybhR 635 556 763 243 -114 - - CDS 1107 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0793 ybhS 827 977 1044 519 26 - - CDS 1134 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0794 ybhF 1289 891 615 208 -78 - - CDS 1752 Putative transport proteins putative ATP-binding component of a transport system b0796 ybiH 594 278 222 99 -186 - - CDS 684 "Hypothetical, unclassified, unknown" putative transcriptional regulator b0797 rhlE -390 -120 -192 -327 -179 - - CDS 1365 "Transcription, RNA processing and degradation" putative ATP-dependent RNA helicase b0798 ybiA 913 169 123 -228 -181 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0799 dinG 817 605 453 487 -76 - - CDS 2151 "DNA replication, recombination, modification and repair" probably ATP-dependent helicase b0802 ybiJ -39 -114 -35 -282 -337 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0803 ybiI 73 -122 -117 -250 -166 - - CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0804 ybiX 374 358 439 424 -30 - - CDS 714 Putative enzymes putative enzyme b0805 - -654 -326 -319 -456 -289 - - CDS 2283 Putative regulatory proteins putative outer membrane receptor for iron transport b0806 ybiM 1067 478 431 525 120 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0807 ybiN 68 97 388 33 -16 - - CDS 1008 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0808 ybiO 364 201 118 176 -34 - - CDS 2361 "Hypothetical, unclassified, unknown" putative transport protein b0809 glnQ 1017 601 562 996 383 - - CDS 723 Transport and binding proteins ATP-binding component of glutamine high-affinity transport system b0810 glnP 789 646 670 692 542 - - CDS 660 Transport and binding proteins glutamine high-affinity transport system; membrane component b0813 ybiF 765 344 310 450 -28 - - CDS 888 "Hypothetical, unclassified, unknown" putative transmembrane subunit b0815 ybiP -139 -141 -174 -125 -220 - - CDS 1584 Putative enzymes putative enzyme b0816 - -201 -26 -128 -51 -21 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0817 - 1348 453 508 113 6 - - CDS 468 "Hypothetical, unclassified, unknown" putative toxin b0818 ybiR -974 -440 -513 -558 -295 - - CDS 1119 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0819 ybiS 686 584 837 178 -35 - - CDS 921 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0820 ybiT 9 208 315 169 -179 - - CDS 1593 Putative transport proteins putative ATP-binding component of a transport system b0821 ybiU 135 186 98 46 -12 - - CDS 1266 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0822 - -375 -65 -138 -202 -59 - - CDS 816 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0823 ybiW 886 791 1039 987 209 - - CDS 2433 Putative enzymes putative formate acetyltransferase b0824 ybiY -450 -216 -294 -238 -217 - - CDS 927 Putative enzymes putative pyruvate formate-lyase 2 activating enzyme b0825 mipB -82 -23 33 -49 -395 - - CDS 735 Central intermediary metabolism putative transaldolase b0826 moeB -1532 -827 -1090 -1338 -632 - - CDS 750 "Biosynthesis of cofactors, prosthetic groups and carriers" molybdopterin biosynthesis b0827 moeA -346 250 -309 -724 -489 - - CDS 1236 "Biosynthesis of cofactors, prosthetic groups and carriers" molybdopterin biosynthesis b0828 ybiK -1463 -491 -832 -762 -472 - - CDS 966 Amino acid biosynthesis and metabolism putative asparaginase b0829 - 268 369 320 173 -196 - - CDS 1839 Transport and binding proteins putative ATP-binding component of a transport system b0830 - -879 -136 -197 -879 -826 - - CDS 1539 Transport and binding proteins putative transport protein b0831 - 148 321 364 166 -229 - - CDS 921 Transport and binding proteins putative transport system permease protein b0832 - -242 -91 12 -169 -176 - - CDS 912 Transport and binding proteins putative transport system permease protein b0833 - 280 232 233 276 117 - - CDS 2349 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0834 - 287 121 180 245 39 - - CDS 1329 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0835 yliG -793 -357 -388 -707 -274 - - CDS 1326 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0836 - -668 -372 -482 -331 -325 - - CDS 384 Putative regulatory proteins putative receptor b0837 yliI 115 131 13 -435 -417 - - CDS 1116 Putative enzymes putative dehydrogenase b0840 deoR 388 227 282 47 -69 - - CDS 759 Nucleotide biosynthesis and metabolism "transcriptional repressor for deo operon, tsx, nupG" b0842 cmr 1060 684 491 314 181 - - CDS 1233 Putative transport proteins proton motive force efflux pump b0843 ybjH -179 -74 -136 -177 -213 - - CDS 285 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0844 - 15 63 -434 -20 -282 - - CDS 789 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0845 - 112 217 36 13 -125 - - CDS 1209 "Hypothetical, unclassified, unknown" putative DEOR-type transcriptional regulator b0846 - -345 -383 -425 -647 -464 - - CDS 537 "Hypothetical, unclassified, unknown" putative DEOR-type transcriptional regulator b0847 - -361 -174 -180 -238 -47 - - CDS 1686 Putative enzymes putative transport protein b0848 ybjM 360 175 129 -95 -402 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0849 grxA 180 317 220 -40 119 - - CDS 258 "Biosynthesis of cofactors, prosthetic groups and carriers" glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase b0852 rimK -459 -48 -270 -511 -433 - - CDS 903 "Translation, post-translational modification" ribosomal protein S6 modification protein b0853 ybjN 1120 1050 849 635 -74 - - CDS 477 Putative regulatory proteins putative sensory transduction regulator b0854 potF -57 230 -28 -24 -46 - - CDS 1113 Transport and binding proteins periplasmic putrescine-binding protein; permease protein b0855 potG -1152 -594 -727 -852 -369 - - CDS 1215 Transport and binding proteins ATP-binding component of putrescine transport system b0856 potH 10 182 127 80 -44 - - CDS 954 Transport and binding proteins putrescine transport protein; permease b0857 potI -628 -345 -380 -339 -240 - - CDS 846 Transport and binding proteins putrescine transport protein; permease b0858 ybjO 229 244 248 187 47 - - CDS 489 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0859 ybjF -234 184 -151 -67 -138 - - CDS 1128 Putative enzymes putative enzyme b0860 artJ -505 -183 -324 -453 -299 - - CDS 732 Transport and binding proteins arginine 3rd transport system periplasmic binding protein b0867 - 855 279 100 -249 -303 - - CDS 831 "Cell processes (incl. adaptation, protection)" putative regulator b0868 - -146 -107 -113 -289 -210 - - CDS 1050 Putative enzymes putative nucleotide di-P-sugar epimerase or dehydratase b0869 ybjT 483 410 315 281 -136 - - CDS 1461 Cell structure putative dTDP-glucose enzyme b0872 - 526 462 366 419 -107 - - CDS 969 Energy metabolism putative enzyme b0873 ybjW -372 -260 -201 94 -77 - - CDS 1659 "Hypothetical, unclassified, unknown" putative prismane b0874 ybjE 203 166 23 -99 -168 - - CDS 948 Cell structure putative surface protein b0875 aqpZ -283 -277 -186 -190 -33 - - CDS 696 Transport and binding proteins transmembrane water channel; aquaporin Z b0876 ybjD 1418 1113 967 1021 190 - - CDS 1659 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0877 ybjX -87 249 239 -214 -228 - - CDS 993 Putative enzymes putative enzyme b0878 - -840 -464 -446 -689 -465 - - CDS 1143 Structural proteins putative membrane protein b0885 aat -1886 -751 -739 -1588 -577 - - CDS 705 "Translation, post-translational modification" "leucyl, phenylalanyl-tRNA-protein transferase" b0886 cydC -165 -171 -289 -419 -511 - - CDS 1722 Transport and binding proteins ATP-binding component of cytochrome-related transport b0887 cydD 120 273 81 -126 -130 - - CDS 1767 Transport and binding proteins "ATP-binding component of cytochrome-related transport, Zn sensitive" b0888 trxB 352 206 246 312 -73 - - CDS 966 Nucleotide biosynthesis and metabolism thioredoxin reductase b0892 ycaJ 899 -14 963 957 -148 - - CDS 1344 "DNA replication, recombination, modification and repair" putative polynucleotide enzyme b0894 dmsA -58 -295 -118 -20 -40 - - CDS 2358 Energy metabolism anaerobic dimethyl sulfoxide reductase subunit A b0895 dmsB -269 63 -57 27 -25 - - CDS 618 Energy metabolism anaerobic dimethyl sulfoxide reductase subunit B b0896 dmsC -550 -347 -343 -287 -85 - - CDS 864 Energy metabolism anaerobic dimethyl sulfoxide reductase subunit C b0898 ycaD 125 434 514 84 -120 - - CDS 1149 Putative transport proteins putative transport b0899 - 456 399 361 376 -37 - - CDS 1623 Putative transport proteins putative transport b0900 ycaN -466 -273 -212 -339 -243 - - CDS 909 Putative regulatory proteins putative transcriptional regulator LYSR-type b0901 ycaK -353 -216 -245 -310 -213 - - CDS 591 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0905 ycaO -85 -106 -36 -130 -159 - - CDS 1770 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0907 serC 1046 1029 908 658 219 - - CDS 1089 Amino acid biosynthesis and metabolism 3-phosphoserine aminotransferase b0908 aroA 1251 968 1179 720 47 - - CDS 1284 Amino acid biosynthesis and metabolism 5-enolpyruvylshikimate-3-phosphate synthetase b0909 ycaL -66 -118 -197 -87 -173 - - CDS 789 "Hypothetical, unclassified, unknown" putative heat shock protein b0913 ycaI -564 -295 -384 -356 -291 - - CDS 2343 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0914 msbA -174 214 28 -182 -176 - - CDS 1749 Transport and binding proteins ATP-binding transport protein; multicopy suppressor of htrB b0915 ycaH 1354 868 762 868 199 - - CDS 987 Putative enzymes putative EC 1.2 enzyme b0916 ycaQ -206 -163 -138 -205 -158 - - CDS 1233 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0919 - 939 471 332 194 49 - - CDS 894 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0920 ycbC -656 94 67 -34 -1 - - CDS 780 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0924 mukB 837 472 589 628 -70 - - CDS 4461 "Cell processes (incl. adaptation, protection)" kinesin-like cell division protein involved in chromosome partitioning b0927 ycbL 1711 1334 1865 874 -272 - - CDS 648 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0930 asnS 10 443 374 -182 -266 - - CDS 1401 "Translation, post-translational modification" asparagine tRNA synthetase b0931 pncB 334 358 551 263 -173 - - CDS 1203 "Biosynthesis of cofactors, prosthetic groups and carriers" nicotinate phosphoribosyltransferase b0932 pepN 1832 2728 1547 1085 -90 - - CDS 2613 "Translation, post-translational modification" aminopeptidase N b0933 ycbE 202 220 208 101 31 - - CDS 768 Putative regulatory proteins putative ATP-binding component of a transport system b0934 ycbM 908 875 854 641 184 - - CDS 837 Putative transport proteins putative transport system permease protein b0935 ycbN -69 72 153 358 36 - - CDS 1146 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0936 ycbO -288 -161 -118 -148 -144 - - CDS 1002 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0937 ycbP -511 -264 -280 -332 -155 - - CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0938 ycbQ -159 -18 -28 -88 -137 - - CDS 549 Cell structure putative fimbrial-like protein b0939 ycbR -219 -128 -152 -94 -215 - - CDS 702 Putative chaperones putative chaperone b0940 ycbS -567 -93 -54 79 -202 - - CDS 2601 Cell structure putative outer membrane protein b0941 - -802 -400 -550 -442 -362 - - CDS 1071 Cell structure homolog of Salmonella FimH protein b0942 - -46 -38 71 72 -166 - - CDS 543 Cell structure putative fimbrial-like protein b0943 - -593 -419 -518 -356 -330 - - CDS 564 Cell structure putative fimbrial-like protein b0944 ycbF 395 263 273 286 -22 - - CDS 738 Putative chaperones putative chaperone b0945 pyrD -289 -180 -164 -121 -187 - - CDS 1011 Nucleotide biosynthesis and metabolism dihydro-orotate dehydrogenase b0946 ycbW 24 -142 -308 -412 -351 - - CDS 579 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0947 - -696 -46 -235 -544 -376 - - CDS 1110 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0948 ycbY 631 463 524 388 101 - - CDS 2109 "Hypothetical, unclassified, unknown" putative oxidoreductase b0949 uup -167 -57 36 -249 -190 - - CDS 1908 Putative transport proteins putative ATP-binding component of a transport system b0950 pqiA 284 211 223 85 -61 - - CDS 1254 Other known genes paraquat-inducible protein A b0951 pqiB 1519 1006 826 791 122 - - CDS 1641 Other known genes paraquat-inducible protein B b0952 ymbA 747 403 358 359 183 - - CDS 549 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0954 fabA 431 764 688 183 -29 - - CDS 519 Fatty acid and phospholipid metabolism "beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase" b0958 sulA 1429 464 245 47 -79 - - CDS 510 "Cell processes (incl. adaptation, protection)" suppressor of lon; inhibits cell division and ftsZ ring formation b0959 - 1235 478 285 244 -34 - - CDS 630 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0960 - 121 39 -52 -57 -29 - - CDS 2163 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0961 yccF -331 -92 -141 -239 -301 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0962 helD 488 546 393 138 150 - - CDS 2055 "DNA replication, recombination, modification and repair" DNA helicase IV b0964 - 269 273 93 131 -109 - - CDS 663 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0967 - 887 578 517 228 117 - - CDS 1104 "Hypothetical, unclassified, unknown" putative oxidoreductase b0968 - 487 427 1013 298 -20 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0969 yccK -341 -204 -109 -166 -228 - - CDS 387 Central intermediary metabolism putative sulfite reductase (EC 1.8.-.-) b0972 hyaA -184 -122 -182 -191 -354 - - CDS 1119 Energy metabolism hydrogenase-1 small subunit b0973 hyaB 554 608 590 222 39 - - CDS 1794 Energy metabolism hydrogenase-1 large subunit b0974 hyaC 86 382 459 157 48 - - CDS 708 Energy metabolism probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit b0975 hyaD -349 -111 -10 -87 -166 - - CDS 588 Energy metabolism processing of HyaA and HyaB proteins b0976 hyaE -809 -446 -411 -533 -521 - - CDS 399 Energy metabolism processing of HyaA and HyaB proteins b0977 hyaF -257 -169 -68 70 -90 - - CDS 858 Energy metabolism nickel incorporation into hydrogenase-1 proteins b0979 appB 784 648 691 997 397 - - CDS 1137 Energy metabolism "probable third cytochrome oxidase, subunit II" b0980 appA -576 -271 -287 -230 -253 - - CDS 1299 Central intermediary metabolism phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic b0981 yccC 1400 1002 1047 1124 423 - - CDS 2181 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0982 yccY -1260 -714 -778 -777 -395 - - CDS 459 Putative enzymes putative phosphatase b0983 yccZ -1757 -943 -1010 -1564 -668 - - CDS 1140 Cell structure putative function in exopolysaccharide production b0984 ymcA -869 -442 -619 -542 -118 - - CDS 2097 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0985 ymcB -415 -199 -227 -241 -145 - - CDS 747 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0986 ymcC -84 37 -32 47 -113 - - CDS 645 Putative regulatory proteins putative regulator b0988 insB_4 435 257 349 418 242 - - CDS 504 IS1 protein InsB b0989 cspH 525 174 109 266 45 - - CDS 213 Other known genes cold shock-like protein b0991 sfa 182 289 200 -6 367 - - CDS 231 "Hypothetical, unclassified, unknown" suppresses fabA and ts growth mutation b0992 yccM 305 169 100 321 79 - - CDS 1074 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b0993 torS 218 71 -17 217 16 - - CDS 2715 Energy metabolism sensor protein torS (regulator TorR) b0994 torT -1564 -938 -982 -1307 -794 - - CDS 1029 Energy metabolism "part of regulation of tor operon, periplasmic" b0995 torR 375 108 130 157 -63 - - CDS 693 Energy metabolism response transcriptional regulator for torA (sensor TorS) b0996 torC -243 -239 -353 -138 -214 - - CDS 1173 Energy metabolism "trimethylamine N-oxide reductase, cytochrome c-type subunit" b0997 torA 1387 990 841 939 408 - - CDS 2547 Energy metabolism trimethylamine N-oxide reductase subunit b0998 torD -350 -218 -259 -180 -173 - - CDS 600 Energy metabolism part of trimethylamine-N-oxide oxidoreductase b0999 yccD 1071 380 432 163 -217 - - CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1001 yccE 297 88 109 221 9 - - CDS 1257 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1005 ycdF 166 52 585 -39 -113 - - CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1006 ycdG -1029 -694 -829 -962 -998 - - CDS 1395 Putative enzymes putative transport protein b1007 - -349 -427 -185 -202 -58 - - CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1008 - -665 -173 -240 -305 -740 - - CDS 591 "Hypothetical, unclassified, unknown" putative enzyme b1009 - -477 -304 -340 -324 -213 - - CDS 801 Central intermediary metabolism putative acetyltransferase b1010 - 34 257 82 0 -56 - - CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1011 - 176 103 298 157 -63 - - CDS 735 Putative enzymes putative synthetase b1012 - -193 -11 85 -44 -19 - - CDS 1149 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1013 ycdC -773 -360 -317 -687 -397 - - CDS 639 "Hypothetical, unclassified, unknown" putative tet operon regulator b1014 putA 354 126 41 -86 -206 - - CDS 3963 Amino acid biosynthesis and metabolism "proline dehydrogenase, P5C dehydrogenase" b1015 putP -107 613 558 423 64 - - CDS 1509 Transport and binding proteins major sodium/proline symporter b1016 - -137 -62 -422 -62 -110 - - CDS 120 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1017 - -883 -416 -549 -641 -556 - - CDS 732 Energy metabolism putative cytochrome b1018 ycdO 1086 696 592 773 50 - - CDS 1128 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1019 ycdB 7 -79 -27 1 -87 - - CDS 1272 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1020 phoH -138 -69 -46 -15 -120 - - CDS 1065 Central intermediary metabolism "PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation" b1021 ycdP -448 -159 -206 -197 -196 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1022 ycdQ -337 -144 -171 -193 -170 - - CDS 1326 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1023 ycdR -452 -255 -268 -142 -178 - - CDS 2019 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1024 ycdS -221 -70 -169 -189 -138 - - CDS 2424 "Hypothetical, unclassified, unknown" putative outer membrane protein b1025 ycdT 155 165 108 157 40 - - CDS 1359 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1026 tra5_3 512 24 330 565 -109 - - CDS 867 IS3 putative transposase b1027 - 513 149 249 467 25 - - CDS 309 "orf, hypothetical protein" b1028 - -291 -193 -195 -52 -135 - - CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1029 ycdU -41 -3 -42 111 -46 - - CDS 987 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1030 - -179 9 18 -47 684 - - CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1031 ycdV 64 466 501 168 2029 - - CDS 414 "Translation, post-translational modification" putative ribosomal protein b1034 ycdX 957 1156 802 643 171 - - CDS 738 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1037 csgG -777 -464 -500 -615 -361 - - CDS 834 Cell structure "curli production assembly/transport component, 2nd curli operon" b1038 csgF -419 -221 -230 -186 -114 - - CDS 417 Cell structure "curli production assembly/transport component, 2nd curli operon" b1039 csgE -523 -302 -343 -361 -239 - - CDS 390 Cell structure "curli production assembly/transport component, 2nd curli operon" b1040 csgD 154 72 -48 42 -156 - - CDS 651 Cell structure putative 2-component transcriptional regulator for 2nd curli operon b1041 csgB 109 1 -7 11 -24 - - CDS 456 Cell structure "minor curlin subunit precursor, similar ro CsgA" b1042 csgA -370 -260 -260 -210 -179 - - CDS 456 Cell structure "curlin major subunit, coiled surface structures; cryptic" b1043 csgC -305 -116 -194 -206 -45 - - CDS 333 "Hypothetical, unclassified, unknown" putative curli production protein b1044 - -384 -116 -271 -205 -120 - - CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1045 - 1180 394 169 -28 -114 - - CDS 534 "Hypothetical, unclassified, unknown" putative polyprotein b1046 ymdC -189 -87 -206 -237 -116 - - CDS 1482 "Hypothetical, unclassified, unknown" putative synthase b1047 ymdD -157 -71 -108 -59 -74 - - CDS 1158 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1049 mdoH 37 621 417 311 -115 - - CDS 2544 "Cell processes (incl. adaptation, protection)" membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO) b1050 yceK -295 -66 -72 -238 -155 - - CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1052 - -626 -268 -369 -455 -238 - - CDS 99 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1053 yceE -293 -98 -134 -221 -232 - - CDS 1227 "Hypothetical, unclassified, unknown" putative transport protein b1055 yceA 404 1693 2103 2039 920 - - CDS 1053 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1056 yceI 1664 1029 1144 989 210 - - CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1057 - -184 130 -902 4 60 - - CDS 567 "Hypothetical, unclassified, unknown" putative cytochrome b1058 yceO -294 -226 -278 -156 103 - - CDS 141 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1059 solA -1562 -738 -794 -954 -302 - - CDS 1119 Putative enzymes sarcosine oxidase-like protein b1061 dinI 254 217 269 106 -166 - - CDS 246 Other known genes damage-inducible protein I b1062 pyrC 13 -86 6 -12 -199 - - CDS 1047 Nucleotide biosynthesis and metabolism dihydro-orotase b1063 yceB 1655 1202 1291 747 79 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1068 mviM 741 856 453 92 -123 - - CDS 924 "Cell processes (incl. adaptation, protection)" putative virulence factor b1069 mviN 420 434 396 80 35 - - CDS 1536 "Cell processes (incl. adaptation, protection)" putative virulence factor b1070 flgN 533 251 146 -1 -40 - - CDS 417 "Cell processes (incl. adaptation, protection)" protein of flagellar biosynthesis b1071 flgM 469 134 54 89 -132 - - CDS 294 "Cell processes (incl. adaptation, protection)" anti-FliA (anti-sigma) factor; also known as RflB protein b1072 flgA 435 195 99 188 135 - - CDS 660 "Cell processes (incl. adaptation, protection)" flagellar biosynthesis; assembly of basal-body periplasmic P ring b1073 flgB -35 -95 -196 -188 -191 - - CDS 417 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, cell-proximal portion of basal-body rod" b1074 flgC 1020 351 173 115 -30 - - CDS 405 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, cell-proximal portion of basal-body rod" b1075 flgD 523 225 79 71 -43 - - CDS 696 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, initiation of hook assembly" b1076 flgE 504 166 -86 223 -143 - - CDS 1209 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, hook protein" b1077 flgF -28 -28 -208 -189 -354 - - CDS 756 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, cell-proximal portion of basal-body rod" b1078 flgG 625 332 325 298 -83 - - CDS 783 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, cell-distal portion of basal-body rod" b1079 flgH -416 -217 -318 -375 -255 - - CDS 699 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein" b1080 flgI -626 -288 -488 -493 -321 - - CDS 1098 "Cell processes (incl. adaptation, protection)" homolog of Salmonella P-ring of flagella basal body b1081 flgJ 259 245 127 158 51 - - CDS 942 "Cell processes (incl. adaptation, protection)" flagellar biosynthesis b1082 flgK 418 196 174 114 -43 - - CDS 1644 "Cell processes (incl. adaptation, protection)" "flagellar biosynthesis, hook-filament junction protein 1" b1083 flgL -663 -631 -387 -407 -344 - - CDS 954 "Cell processes (incl. adaptation, protection)" flagellar biosynthesis; hook-filament junction protein b1085 - -264 -124 -134 -216 -127 - - CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1086 yceC -325 -151 -174 -319 -193 - - CDS 960 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1087 yceF 70 109 125 10 -214 - - CDS 624 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1095 fabF -530 85 49 -242 -324 - - CDS 1242 Fatty acid and phospholipid metabolism 3-oxoacyl-[acyl-carrier-protein] synthase II b1096 pabC 38 -73 -68 -70 -230 - - CDS 810 "Biosynthesis of cofactors, prosthetic groups and carriers" 4-amino-4-deoxychorismate lyase b1097 yceG 770 372 370 217 -71 - - CDS 1023 Putative enzymes putative thymidylate kinase (EC 2.7.4.9) b1099 holB -367 -17 -82 -214 -206 - - CDS 1005 "DNA replication, recombination, modification and repair" "DNA polymerase III, delta prime subunit" b1100 ycfH 1273 382 285 12 -155 - - CDS 798 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1102 fhuE -455 -259 -305 -373 -133 - - CDS 2190 Transport and binding proteins outer membrane receptor for ferric iron uptake b1110 ycfJ -361 28 -183 -297 -197 - - CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1111 ycfQ 1299 657 516 372 158 - - CDS 711 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1112 ycfR 187 -54 -138 -39 -242 - - CDS 258 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1113 ycfS -70 40 1 44 -51 - - CDS 963 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1114 mfd 917 703 670 566 282 - - CDS 3447 "DNA replication, recombination, modification and repair" transcription-repair coupling factor; mutation frequency decline b1115 ycfT -333 -429 -238 -251 -129 - - CDS 1074 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1116 ycfU 1532 930 919 860 326 - - CDS 1200 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1117 ycfV 563 485 521 211 -304 - - CDS 687 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b1118 ycfW 1542 1004 770 581 -48 - - CDS 1245 Putative enzymes putative kinase b1119 ycfX 970 566 875 585 133 - - CDS 912 Putative regulatory proteins putative NAGC-like transcriptional regulator b1121 - -535 -289 -345 -314 -226 - - CDS 789 "Hypothetical, unclassified, unknown" homolog of virulence factor b1122 ymfA -608 -326 -388 -317 -273 - - CDS 471 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1123 potD 1339 930 1111 577 229 - - CDS 1047 Transport and binding proteins spermidine/putrescine periplasmic transport protein b1124 potC 897 346 842 548 -48 - - CDS 795 Transport and binding proteins spermidine/putrescine transport system permease b1125 potB -192 27 -47 -151 -101 - - CDS 828 Transport and binding proteins spermidine/putrescine transport system permease b1126 potA 401 935 790 607 234 - - CDS 1137 Transport and binding proteins ATP-binding component of spermidine/putrescine transport b1127 pepT 1396 720 689 414 -147 - - CDS 1227 "Translation, post-translational modification" putative peptidase T b1131 purB 1170 738 635 846 257 - - CDS 1371 Nucleotide biosynthesis and metabolism adenylosuccinate lyase b1132 ycfC 107 283 79 -100 -245 - - CDS 642 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1133 ycfB -46 490 452 -262 -335 - - CDS 1152 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1134 - 128 236 128 121 -32 - - CDS 462 Putative enzymes putative phosphohydrolase b1135 ymfC 747 452 451 449 87 - - CDS 624 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1137 ymfD -212 -132 -213 -196 -194 - - CDS 666 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1138 ymfE 1059 104 127 97 -25 - - CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1139 lit -228 -152 -219 -196 -168 - - CDS 894 "phage, transposon, or plasmid" phage T4 late gene expression; at locus of e14 element b1140 intE 71 14 -98 -125 -72 - - CDS 1128 "phage, transposon, or plasmid" prophage e14 integrase b1141 - -591 -338 -378 -375 -324 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1142 ymfH -295 -22 -129 -182 -120 - - CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1143 ymfI 201 428 313 168 -31 - - CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1144 ymfJ -508 -296 -141 -336 -194 - - CDS 285 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1145 - 82 -31 0 -157 -100 - - CDS 675 "phage, transposon, or plasmid" putative phage repressor b1146 - 140 88 16 6 31 - - CDS 504 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1147 ymfL -873 -437 -633 -821 -272 - - CDS 570 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1148 ymfM 197 185 167 197 156 - - CDS 339 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1149 ymfN -610 -331 -374 -412 -260 - - CDS 1368 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1152 - 741 384 594 621 149 - - CDS 792 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1153 - -5 41 -103 26 -98 - - CDS 585 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1154 ycfK -168 396 -87 -101 -55 - - CDS 630 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1155 - -260 5 -222 -65 -186 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1156 ycfA -141 32 -75 2 -58 - - CDS 603 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1157 - -307 -119 -200 -222 -128 - - CDS 540 "phage, transposon, or plasmid" putative tail fiber protein b1158 pin 716 526 564 559 60 - - CDS 555 "phage, transposon, or plasmid" inversion of adjacent DNA; at locus of e14 element b1159 mcrA -355 -105 -111 -45 -129 - - CDS 834 "Transcription, RNA processing and degradation" restriction of DNA at 5-methylcytosine residues; at locus of e14 element b1160 ycgW -489 -261 -331 -363 -220 - - CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1161 ycgX -460 -243 -219 -296 -191 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1162 ycgE 360 209 46 -63 -80 - - CDS 732 Putative regulatory proteins putative transcriptional regulator b1163 - -161 -94 -188 -120 -130 - - CDS 1212 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1164 ycgZ -507 -331 74 -282 -249 - - CDS 237 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1165 ymgA 531 55 -128 584 126 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1166 ymgB -511 -292 -336 -298 -182 - - CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1167 ymgC -497 -271 -337 -313 -217 - - CDS 249 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1168 - -326 -191 -275 -211 -154 - - CDS 1566 Putative enzymes putative proteases b1169 - -319 -173 -144 -163 -122 - - CDS 1521 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b1170 - 579 354 418 420 170 - - CDS 1017 "Hypothetical, unclassified, unknown" putative part of putative ATP-binding component of a transport system b1171 - 123 -73 -60 -186 -124 - - CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1172 - 1728 1294 1148 1334 474 - - CDS 285 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1173 - 560 -301 -375 -7 -372 - - CDS 213 "orf, hypothetical protein" b1178 ycgK 808 410 457 278 -52 - - CDS 402 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1179 ycgL 1216 794 605 304 -22 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1180 - 741 586 339 237 -206 - - CDS 660 Putative enzymes putative isomerase b1182 hlyE -183 -133 -198 -210 -170 - - CDS 918 "Hypothetical, unclassified, unknown" hemolysin E b1183 umuD 45 5 -36 47 -39 - - CDS 420 "DNA replication, recombination, modification and repair" SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC b1184 umuC 246 154 171 144 -168 - - CDS 1269 "DNA replication, recombination, modification and repair" SOS mutagenesis and repair b1185 dsbB -630 -247 -181 -531 -462 - - CDS 531 Cell structure reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. b1186 nhaB -116 133 -1 -96 -162 - - CDS 1542 Transport and binding proteins "Na+/H+ antiporter, pH independent" b1189 dadA 284 462 405 -13 -414 - - CDS 1299 Amino acid biosynthesis and metabolism D-amino acid dehydrogenase subunit b1190 dadX 605 245 249 257 -40 - - CDS 1071 Amino acid biosynthesis and metabolism "alanine racemase 2, catabolic" b1191 - 67 451 292 -56 -180 - - CDS 1611 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1192 - 82 206 290 -85 -233 - - CDS 915 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1193 mltE 110 279 338 -16 8 - - CDS 726 "Hypothetical, unclassified, unknown" murein transglycosylase E b1194 ycgR -275 -135 -188 -257 -38 - - CDS 735 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1195 ymgE 39 -18 -48 -121 -284 - - CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1196 ycgY -574 -275 -383 -346 -219 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1198 ycgC 18 22 -77 0 -224 - - CDS 1422 Putative enzymes putative PTS system enzyme I b1201 - -107 -67 -252 -172 -174 - - CDS 1929 Putative regulatory proteins putative sensor-type regulator b1202 - -45 43 -115 59 19 - - CDS 2868 Membrane proteins putative adhesion and penetration protein b1203 ychF 1199 1070 1213 624 -127 - - CDS 1092 "Hypothetical, unclassified, unknown" putative GTP-binding protein b1204 pth -218 138 247 -391 -291 - - CDS 585 "Translation, post-translational modification" peptidyl-tRNA hydrolase b1206 ychM -458 -181 -262 -403 -173 - - CDS 1653 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1207 prsA 122 1011 871 -16 -234 - - CDS 948 Nucleotide biosynthesis and metabolism phosphoribosylpyrophosphate synthetase b1210 hemA 636 699 348 -32 -224 - - CDS 1257 "Biosynthesis of cofactors, prosthetic groups and carriers" enzyme in alternate path of synthesis of 5-aminolevulinate b1211 prfA -501 333 -1 -341 -374 - - CDS 1083 "Translation, post-translational modification" peptide chain release factor RF-1 b1212 hemK -893 -409 -562 -669 -451 - - CDS 834 "Biosynthesis of cofactors, prosthetic groups and carriers" possible protoporphyrinogen oxidase b1213 - -530 -128 -329 -481 -374 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1216 chaA -128 34 -31 -189 -137 - - CDS 1101 Transport and binding proteins sodium-calcium/proton antiporter b1218 chaC 864 376 -1351 220 -91 - - CDS 717 Transport and binding proteins cation transport regulator b1220 ychP -362 -164 -385 -411 -224 - - CDS 1254 Structural proteins putative factor b1223 narK 15 -271 -145 -37 -167 - - CDS 1392 Transport and binding proteins nitrite extrusion protein b1224 narG 992 947 489 570 -280 - - CDS 3744 Energy metabolism "nitrate reductase 1, alpha subunit" b1225 narH 341 637 448 216 -33 - - CDS 1539 Energy metabolism "nitrate reductase 1, beta subunit" b1226 narJ 1301 983 1389 1454 786 - - CDS 711 Energy metabolism "nitrate reductase 1, delta subunit, assembly function" b1227 narI 597 423 512 399 -179 - - CDS 678 Energy metabolism "nitrate reductase 1, cytochrome b(NR), gamma subunit" b1228 - -339 -161 -140 -142 -7 - - CDS 276 "orf, hypothetical protein" b1229 tpr -400 -209 -184 -29 -144 - - CDS 102 "DNA replication, recombination, modification and repair" a protaminelike protein b1232 purU 437 726 629 100 -49 - - CDS 843 Nucleotide biosynthesis and metabolism formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis b1233 ychJ 611 852 754 202 -226 - - CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1234 ychK 371 525 401 25 -107 - - CDS 945 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1235 hnr 391 487 406 206 -132 - - CDS 1014 "DNA replication, recombination, modification and repair" Hnr protein b1238 tdk 170 276 460 303 -58 - - CDS 618 Nucleotide biosynthesis and metabolism thymidine kinase b1239 ychG -260 -124 -193 -97 -157 - - CDS 591 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1240 - 1093 700 781 581 82 - - CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1242 ychE 372 228 1553 -32 -204 - - CDS 648 Putative transport proteins putative channel protein b1250 kch 818 484 610 21 -242 - - CDS 1254 Transport and binding proteins putative potassium channel protein b1251 yciI 926 1151 700 375 -180 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1252 tonB 701 339 348 683 230 - - CDS 720 Transport and binding proteins "energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins" b1253 yciA 1485 752 816 469 133 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1256 yciD 344 33 34 67 6 - - CDS 639 Cell structure putative outer membrane protein b1257 yciE -413 -190 517 -277 -85 - - CDS 507 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1258 yciF -427 -268 -382 -257 -194 - - CDS 501 Structural proteins putative structural proteins b1259 yciG -148 -150 -216 -289 -228 - - CDS 237 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1260 trpA 195 356 131 173 -55 - - CDS 807 Amino acid biosynthesis and metabolism "tryptophan synthase, alpha protein" b1261 trpB 366 510 389 219 -219 - - CDS 1194 Amino acid biosynthesis and metabolism "tryptophan synthase, beta protein" b1262 trpC -150 621 25 713 158 - - CDS 1362 Amino acid biosynthesis and metabolism N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase b1263 trpD 784 697 458 393 162 - - CDS 1596 Amino acid biosynthesis and metabolism "anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase" b1264 trpE 32 -251 -231 -104 -191 - - CDS 1563 Amino acid biosynthesis and metabolism anthranilate synthase component I b1265 trpL 18 -41 -129 -80 -8 - - CDS 45 Amino acid biosynthesis and metabolism trp operon leader peptide b1268 yciQ -1031 -603 -794 -829 -635 - - CDS 1896 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1269 yciL 858 1281 1260 850 161 - - CDS 876 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1270 btuR 96 229 214 94 -108 - - CDS 591 "Biosynthesis of cofactors, prosthetic groups and carriers" cob(I)alamin adenolsyltransferase b1271 yciK 49 138 38 -104 -227 - - CDS 759 Putative enzymes putative oxidoreductase b1274 topA 650 253 430 249 -77 - - CDS 2598 "DNA replication, recombination, modification and repair" "DNA topoisomerase type I, omega protein" b1275 cysB 45 54 -44 -113 -173 - - CDS 975 Amino acid biosynthesis and metabolism positive transcriptional regulator for cysteine regulon b1277 ribA 1171 783 597 11 -152 - - CDS 591 "Biosynthesis of cofactors, prosthetic groups and carriers" GTP cyclohydrolase II b1279 yciS 1082 680 389 -178 -362 - - CDS 309 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1280 yciM -353 157 -163 -179 -266 - - CDS 1170 "Hypothetical, unclassified, unknown" putative heat shock protein b1281 pyrF 537 457 716 429 106 - - CDS 738 Nucleotide biosynthesis and metabolism orotidine-5'-phosphate decarboxylase b1284 - 413 226 240 64 -75 - - CDS 750 Putative regulatory proteins putative DEOR-type transcriptional regulator b1285 yciR -58 183 167 9 -55 - - CDS 1986 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1286 rnb -159 194 5 -154 -181 - - CDS 1935 "DNA replication, recombination, modification and repair" "RNase II, mRNA degradation" b1287 yciW 478 181 109 81 -178 - - CDS 1206 Putative enzymes putative oxidoreductase b1289 ycjD -183 -4 -38 -28 -172 - - CDS 354 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1290 sapF -61 30 -3 -82 -276 - - CDS 807 Transport and binding proteins putative ATP-binding protein of peptide transport system b1291 sapD 380 290 133 219 -60 - - CDS 993 Transport and binding proteins putative ATP-binding protein of peptide transport system b1292 sapC 133 190 -327 -81 -156 - - CDS 891 Transport and binding proteins homolog of Salmonella peptide transport permease protein b1293 sapB -504 -302 -310 -389 -413 - - CDS 966 Transport and binding proteins homolog of Salmonella peptide transport permease protein b1295 ymjA 427 469 358 457 233 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1296 ycjJ -640 -434 -545 -574 -341 - - CDS 1440 Putative transport proteins putative amino acid/amine transport protein b1297 - -130 -200 -308 -108 -144 - - CDS 1497 Putative enzymes putative glutamine synthetase (EC 6.3.1.2) b1298 ycjL 377 146 68 1241 -54 - - CDS 777 Putative enzymes probable amidotransferase subunit b1299 ycjC 206 169 13 142 -57 - - CDS 558 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1300 aldH -1428 -798 -1006 -931 -625 - - CDS 1488 Energy metabolism "aldehyde dehydrogenase, prefers NADP over NAD" b1301 ordL -1080 -503 -688 -823 -591 - - CDS 1281 Putative enzymes probable oxidoreductase b1302 goaG -120 -76 -377 -374 -392 - - CDS 1266 Central intermediary metabolism 4-aminobutyrate aminotransferase b1303 pspF -90 -179 -201 -284 -184 - - CDS 993 "phage, transposon, or plasmid" psp operon transcriptional activator b1304 pspA 1041 802 1242 873 289 - - CDS 669 "phage, transposon, or plasmid" "phage shock protein, inner membrane protein" b1305 pspB 1365 921 813 794 173 - - CDS 225 "phage, transposon, or plasmid" phage shock protein b1306 pspC 13 185 144 -36 -59 - - CDS 360 "phage, transposon, or plasmid" phage shock protein: activates phage shock-protein expression b1307 pspD 1143 1000 1026 787 295 - - CDS 222 "phage, transposon, or plasmid" phage shock protein b1309 ycjM -353 -53 -210 -234 -212 - - CDS 1707 Putative enzymes putative polysaccharide hydrolase b1310 - -499 -157 -231 -334 -256 - - CDS 1293 "Hypothetical, unclassified, unknown" putative transport periplasmic protein b1311 ycjO 158 218 140 216 -100 - - CDS 882 Putative transport proteins putative binding-protein dependent transport protein b1312 ycjP -343 -64 -278 -235 -204 - - CDS 843 Putative transport proteins putative transport system permease protein b1313 ycjQ -388 -228 -414 -288 -269 - - CDS 1053 Putative enzymes putative oxidoreductase b1314 - -151 123 -34 -151 -69 - - CDS 798 Putative regulatory proteins putative transient receptor potential locus b1315 ycjS -653 -432 -493 -429 -260 - - CDS 1056 Putative enzymes putative dehydrogenase b1316 ycjT -911 -407 -505 -513 -246 - - CDS 2268 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1317 ycjU -492 -257 -304 -309 -160 - - CDS 660 "Hypothetical, unclassified, unknown" putative beta-phosphoglucomutase b1318 ycjV -71 37 -119 -207 -106 - - CDS 969 Putative transport proteins putative ATP-binding component of a transport system b1319 ompG 128 79 -8 -24 -175 - - CDS 906 "Hypothetical, unclassified, unknown" outer membrane protein b1320 ycjW 395 339 360 442 137 - - CDS 999 Regulatory function putative LACI-type transcriptional regulator b1321 ycjX -413 -203 -156 -158 -300 - - CDS 1398 Putative enzymes putative EC 2.1 enzymes b1322 ycjF -125 -125 -113 2 -137 - - CDS 1062 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1323 tyrR 131 465 232 -256 -324 - - CDS 1542 Transport and binding proteins "transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport" b1326 ycjI 86 40 -157 -223 -209 - - CDS 789 Putative enzymes putative carboxypeptidase b1327 - -191 -94 -211 -208 -208 - - CDS 933 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1328 ycjZ -176 -70 300 18 3 - - CDS 900 Putative regulatory proteins putative transcriptional regulator LYSR-type b1329 - 966 852 547 262 -135 - - CDS 1635 Transport and binding proteins putative transport periplasmic protein b1332 ynaJ 1057 466 109 588 -156 - - CDS 258 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1333 ydaA -643 -444 -579 -481 -343 - - CDS 951 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1334 fnr 1258 502 663 1143 -77 - - CDS 753 Regulatory function "transcriptional regulation of aerobic, anaerobic respiration, osmotic balance" b1335 ogt 50 59 17 14 114 - - CDS 516 "DNA replication, recombination, modification and repair" O-6-alkylguanine-DNA/cysteine-protein methyltransferase b1336 ydaH -173 -75 -211 -188 -143 - - CDS 1533 Putative transport proteins putative pump protein (transport) b1337 - -862 872 788 -605 160 - - CDS 1446 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1338 ydaJ 790 467 435 558 165 - - CDS 1326 Putative enzymes putative aminohydrolase (EC 3.5.1.14) b1339 ydaK -469 -189 -290 -218 -70 - - CDS 909 Putative regulatory proteins putative transcriptional regulator LYSR-type b1340 ydaL -1792 -997 -1115 -1547 -956 - - CDS 564 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1341 - -168 -178 -124 -53 -6 - - CDS 1293 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1342 - -234 -114 -233 128 -22 - - CDS 984 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1343 dbpA 304 318 212 273 65 - - CDS 1374 "Transcription, RNA processing and degradation" ATP-dependent RNA helicase b1344 ydaO -317 -74 -130 -186 -175 - - CDS 936 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1345 - -258 -261 -346 -408 -329 - - CDS 1236 "phage, transposon, or plasmid" putative transposase b1346 ydaQ -572 -232 -279 -303 -180 - - CDS 240 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1347 ydaC -567 -260 -361 -301 -220 - - CDS 210 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1348 lar -543 -290 -365 -375 -246 - - CDS 195 "DNA replication, recombination, modification and repair" restriction alleviation and modification enhancement b1349 recT -80 16 2 -33 69 - - CDS 810 "DNA replication, recombination, modification and repair" "recombinase, DNA renaturation" b1350 recE -602 -300 -451 -320 -180 - - CDS 2601 "Transcription, RNA processing and degradation" "exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific" b1351 racC -512 -267 -674 -325 -196 - - CDS 276 "phage, transposon, or plasmid" defective prophage rac; contains recE and oriJ b1352 ydaD -512 -151 -370 -221 -14 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1353 sieB -528 -267 -414 -322 -201 - - CDS 612 "phage, transposon, or plasmid" phage superinfection exclusion protein b1354 - -600 -269 -385 -380 -189 - - CDS 177 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1355 - -278 -69 -114 -188 -42 - - CDS 180 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1357 ydaS -403 -144 -243 -218 -177 - - CDS 297 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1358 ydaT -307 -137 -176 -171 -279 - - CDS 423 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1359 ydaU -198 -151 -112 -88 -89 - - CDS 858 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1360 - 49 122 48 99 78 - - CDS 747 "DNA replication, recombination, modification and repair" putative DNA replication factor b1361 ydaW 153 199 133 137 -19 - - CDS 612 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1362 - -334 -101 -178 -4 -136 - - CDS 306 "phage, transposon, or plasmid" putative Rac prophage endopeptidase b1363 trkG -164 12 -122 -16 -74 - - CDS 1458 Transport and binding proteins trk system potassium uptake; part of Rac prophage b1364 - 360 254 176 370 118 - - CDS 282 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1365 - 614 743 579 667 115 - - CDS 264 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1366 ydaY -539 -34 -66 -164 -155 - - CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1367 - -273 -205 100 -236 -162 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1368 - -470 -269 -316 -304 -127 - - CDS 1029 Structural proteins putative alpha helix protein b1369 - -268 -177 -237 -192 -132 - - CDS 156 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1370 trs5_5 -693 -389 -472 -527 -373 - - CDS 981 "phage, transposon, or plasmid" IS5 transposase b1371 - 499 533 394 287 -34 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1372 - -738 -665 -493 -528 -241 - - CDS 3369 "phage, transposon, or plasmid" putative membrane protein b1373 ynaC 51 -115 -46 45 -107 - - CDS 576 "orf, hypothetical protein" b1374 - 65 18 -34 -66 -130 - - CDS 591 putative transposon resolvase b1375 ynaE 568 -123 -182 -206 -178 - - CDS 267 "orf, hypothetical protein" b1377 - -327 -132 -236 -282 -155 - - CDS 1134 Cell structure putative outer membrane protein b1378 ydbK -297 -144 -160 -354 -213 - - CDS 3525 Putative enzymes "putative oxidoreductase, Fe-S subunit" b1379 hslJ 27 -157 -175 -135 -178 - - CDS 423 "Cell processes (incl. adaptation, protection)" heat shock protein hslJ b1381 ydbH 73 261 124 106 -189 - - CDS 2640 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1382 ynbE 33 126 -38 -152 -176 - - CDS 186 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1383 ydbL 364 396 376 74 -89 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1384 feaR -781 -498 -581 -429 -263 - - CDS 906 Putative regulatory proteins regulatory protein for 2-phenylethylamine catabolism b1385 feaB 450 351 546 368 51 - - CDS 1503 Putative enzymes phenylacetaldehyde dehydrogenase b1386 tynA -96 -76 -79 -106 -161 - - CDS 2274 Amino acid biosynthesis and metabolism copper amine oxidase (tyramine oxidase) b1387 maoC -151 -116 -183 -102 -247 - - CDS 2046 "Hypothetical, unclassified, unknown" putative aldehyde dehydrogenase b1388 ydbO -1168 -676 -773 -817 -385 - - CDS 930 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1389 ynbF 262 -95 -558 92 -112 - - CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1390 ydbP -43 188 445 -92 132 - - CDS 747 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1391 - -398 -165 -259 -414 -224 - - CDS 504 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1392 - -430 -275 -248 -374 -249 - - CDS 1071 Energy metabolism putative oxidoreductase b1393 ydbS -139 -185 -154 -211 -162 - - CDS 768 Putative enzymes putative enzyme b1394 - -280 -247 -344 -409 -249 - - CDS 789 Putative enzymes putative enzyme b1395 ydbU -1034 -585 -664 -730 -271 - - CDS 1428 Fatty acid and phospholipid metabolism putative enzyme b1396 - -537 -350 -413 -425 -288 - - CDS 423 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1397 - 619 456 352 359 160 - - CDS 1206 Fatty acid and phospholipid metabolism putative acyltransferase b1398 - -34 -85 -134 0 -94 - - CDS 1314 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1399 - 517 246 -49 -194 -186 - - CDS 951 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1400 - 1663 856 712 650 51 - - CDS 591 "Hypothetical, unclassified, unknown" putative transferase b1401 ydbA_1 118 105 -25 -43 -142 - - CDS 2559 "Hypothetical, unclassified, unknown" split orf b1403 yi21_2 1239 171 504 317 -8 - - CDS 411 IS2 hypothetical protein b1404 tra8_2 -32 102 -15 62 -124 - - CDS 1152 IS30 transposase b1405 ydbA_2 -218 -156 -199 -265 -348 - - CDS 3324 "Hypothetical, unclassified, unknown" split orf b1407 ydbD 152 210 85 194 134 - - CDS 2313 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1408 - -277 -130 -231 -125 -156 - - CDS 612 Putative enzymes probable enzyme b1409 - -444 -258 -349 -336 -225 - - CDS 897 Fatty acid and phospholipid metabolism putative phosphatidate cytidiltransferase b1410 - -309 -104 -268 48 236 - - CDS 1758 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1411 ynbD -48 18 -141 -67 -42 - - CDS 1293 Putative enzymes putative enzymes b1412 acpD -183 -150 -213 -293 -219 - - CDS 606 Fatty acid and phospholipid metabolism acyl carrier protein phosphodiesterase b1414 ydcF -265 -283 -203 -215 -150 - - CDS 801 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1417 gapC_1 3634 3051 2178 1836 -10 - - CDS 405 Energy metabolism "glyceraldehyde 3-phosphate dehydrogenase C, interrupted" b1419 ydcA 79 -169 -36 -241 -151 - - CDS 174 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1420 - 187 246 408 175 204 - - CDS 168 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1421 trg 1409 562 1125 1111 359 - - CDS 1641 "Cell processes (incl. adaptation, protection)" "methyl-accepting chemotaxis protein III, ribose sensor receptor" b1422 - -734 -413 -528 -514 -276 - - CDS 1065 Putative regulatory proteins putative transcriptional regulator LYSR-type b1423 - 690 209 167 99 -130 - - CDS 1344 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1424 ydcG -483 -86 -86 -304 -254 - - CDS 1656 Cell structure putative glycoprotein b1425 - -40 44 85 -34 -68 - - CDS 204 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1427 rimL 1147 426 317 80 -105 - - CDS 540 "Translation, post-translational modification" acetylation of N-terminal serine of 30S ribosomal subunit protein L7; acetyl transferase b1428 - 173 -75 337 -207 -275 - - CDS 981 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1429 tehA 351 241 229 -44 -195 - - CDS 993 "Cell processes (incl. adaptation, protection)" tellurite resistance b1430 tehB 629 651 573 260 -62 - - CDS 594 "Cell processes (incl. adaptation, protection)" tellurite resistance b1431 - 907 505 866 150 -66 - - CDS 669 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1432 - 9 147 62 -343 -169 - - CDS 1209 "Hypothetical, unclassified, unknown" putative virulence protein b1433 - -193 67 -28 -147 -204 - - CDS 1437 Cell structure putative membrane transport protein b1434 ydcN -256 -45 -169 -189 -245 - - CDS 537 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1435 ydcP 221 291 188 61 -254 - - CDS 2004 Putative enzymes putative collagenase b1436 - 150 -32 132 -97 64 - - CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1437 - -261 -162 -203 -205 -156 - - CDS 198 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1438 - 1080 888 506 442 60 - - CDS 438 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1439 - 196 56 -15 133 -54 - - CDS 1407 Putative regulatory proteins multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system b1440 - 1394 575 277 -52 -140 - - CDS 1146 Putative transport proteins putative transport protein b1442 - 390 354 119 -37 -227 - - CDS 942 Putative transport proteins putative transport system permease protein b1445 - -209 -31 -10 -39 -239 - - CDS 249 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1446 - -859 -587 -616 -853 -517 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1447 - -565 -280 -356 -397 -438 - - CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1450 - -153 -302 -309 -366 -510 - - CDS 723 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1451 - -548 -278 -378 -374 -395 - - CDS 2103 Putative transport proteins putative outer membrane receptor for iron transport b1452 - 377 278 115 117 -144 - - CDS 1062 Putative transport proteins putative receptor b1453 ansP -479 -364 -708 -324 -252 - - CDS 1551 Transport and binding proteins L-asparagine permease b1454 - -560 -371 -282 -400 -244 - - CDS 618 Putative enzymes putative transferase b1455 - -516 -228 -324 -310 -199 - - CDS 213 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1456 rhsE -551 -286 -357 -356 -310 - - CDS 2049 "Hypothetical, unclassified, unknown" rhsE protein in rhs element b1457 ydcD 8 112 98 -45 -172 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1458 - -404 -252 -267 -301 -186 - - CDS 747 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1459 - -565 -289 -392 -323 -253 - - CDS 201 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1461 ydcE -277 -157 -183 -269 -225 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1462 - -74 -84 -80 -194 -158 - - CDS 618 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1463 - -402 -212 -334 -385 -269 - - CDS 846 Putative enzymes putative N-hydroxyarylamine O-acetyltransferase b1464 yddE -232 -50 -157 -469 -352 - - CDS 894 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1465 narV 879 560 528 545 128 - - CDS 681 Energy metabolism "cryptic nitrate reductase 2, gamma subunit" b1467 narY 164 179 56 151 -100 - - CDS 1545 Energy metabolism "cryptic nitrate reductase 2, beta subunit" b1468 narZ -228 -71 -28 81 -343 - - CDS 3741 Energy metabolism "cryptic nitrate reductase 2, alpha subunit" b1469 narU 1137 1017 883 878 399 - - CDS 1389 Energy metabolism nitrite extrusion protein 2 b1470 - -509 -346 -391 -346 -262 - - CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1471 - -486 -260 -306 -275 -168 - - CDS 957 Cell structure putative glycoportein b1472 - -802 -455 -550 -633 -355 - - CDS 291 Membrane proteins putative outer membrane porin protein b1473 yddG 559 434 373 326 64 - - CDS 882 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1474 fdnG 355 586 520 755 299 - - CDS 3048 Energy metabolism "formate dehydrogenase-N, nitrate-inducible, alpha subunit" b1475 fdnH -6 245 128 245 -10 - - CDS 885 Energy metabolism "formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit" b1476 fdnI 97 154 117 125 1 - - CDS 654 Energy metabolism "formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit" b1477 yddM 254 226 114 -120 -252 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1478 adhP 1419 858 931 787 363 - - CDS 1041 Putative enzymes alcohol dehydrogenase b1481 - -399 -304 -262 -289 -268 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1483 - 360 26 0 247 -76 - - CDS 927 Transport and binding proteins putative ATP-binding component of a transport system b1484 - -338 -196 -211 -257 -224 - - CDS 987 Transport and binding proteins putative ATP-binding component of a transport system b1485 - -173 -147 -174 -139 -53 - - CDS 897 Transport and binding proteins putative transport protein b1486 - -463 -179 -300 -349 -271 - - CDS 1023 Transport and binding proteins putative transport system permease protein b1487 - -455 -184 -336 -235 -287 - - CDS 1551 Putative transport proteins putative hemin-binding lipoprotein b1488 - -333 -133 -264 -288 -119 - - CDS 582 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1489 - -464 -224 -298 -316 -185 - - CDS 2424 "Hypothetical, unclassified, unknown" putative enzyme b1490 - -337 -124 -131 -205 -191 - - CDS 1383 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1491 - -40 72 233 62 39 - - CDS 1320 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1492 xasA 545 497 662 432 55 - - CDS 1536 Other known genes "acid sensitivity protein, putative transporter" b1493 gadB -513 -271 -340 -336 -217 - - CDS 1401 Central intermediary metabolism glutamate decarboxylase isozyme b1494 pqqL -553 -267 -278 -325 -227 - - CDS 2796 "Hypothetical, unclassified, unknown" putative peptidase b1495 yddB -545 -270 -366 -367 -268 - - CDS 2373 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1496 yddA -640 -396 -423 -419 -300 - - CDS 1686 Putative transport proteins putative ATP-binding component of a transport system b1497 - 741 372 114 -142 -165 - - CDS 1173 Putative regulatory proteins putative enzyme b1499 - -403 -215 -297 -314 -222 - - CDS 762 "Hypothetical, unclassified, unknown" putative ARAC-type regulatory protein b1500 - -558 -241 -346 -311 -220 - - CDS 198 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1501 - -365 -199 -246 -258 -130 - - CDS 2280 Putative enzymes "putative oxidoreductase, major subunit" b1502 - -701 -360 -484 -488 -278 - - CDS 915 Cell structure putative adhesin; similar to FimH protein b1503 - -302 -167 -224 -136 -203 - - CDS 504 "Hypothetical, unclassified, unknown" putative fimbrial-like protein b1504 - -324 -143 -206 -102 -113 - - CDS 531 "Hypothetical, unclassified, unknown" putative fimbrial-like protein b1505 - -555 -328 -361 -357 -334 - - CDS 1149 Structural proteins putative outer membrane protein b1506 - -889 -556 -616 -584 -417 - - CDS 180 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1507 hipA 590 177 57 173 -68 - - CDS 1323 Cell structure "persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator" b1508 hipB 622 144 11 -7 -126 - - CDS 267 Cell structure persistence to inhibition of murein or DNA biosynthesis; regulatory protein b1509 - 457 400 250 583 64 - - CDS 1401 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system and adhesin protein b1510 ydeK -165 -122 -212 -313 -301 - - CDS 3978 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1511 ydeV -74 12 -4 134 -84 - - CDS 1593 "Hypothetical, unclassified, unknown" putative kinase b1512 ydeW 1428 572 439 494 188 - - CDS 954 Putative regulatory proteins "putative transcriptional regulator, sorC family" b1513 - -632 -272 -344 -351 -118 - - CDS 1536 Putative transport proteins putative ATP-binding component of a transport system b1514 ydeY 476 283 159 244 76 - - CDS 1029 Putative transport proteins putative transport system permease protein b1515 ydeZ -441 -378 -391 -383 -267 - - CDS 993 Putative transport proteins putative transport system permease protein b1516 - 649 274 286 134 -114 - - CDS 1023 "Hypothetical, unclassified, unknown" putative LACI-type transcriptional regulator b1517 yneB 303 147 208 10 -149 - - CDS 876 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1518 - 107 75 110 -54 -162 - - CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1519 - 1273 780 686 378 57 - - CDS 759 "Hypothetical, unclassified, unknown" putative enzyme b1520 - 182 217 77 -28 -108 - - CDS 966 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1521 uxaB 569 345 363 418 89 - - CDS 1452 Carbon compound catabolism altronate oxidoreductase b1522 - -133 24 -70 -139 -131 - - CDS 948 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1523 - -342 -113 -230 -248 -205 - - CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1524 yneH 392 306 383 268 24 - - CDS 927 Putative enzymes putative glutaminase b1525 - 562 461 427 265 -23 - - CDS 1413 Putative enzymes putative aldehyde dehydrogenase b1526 yneJ -362 -271 -267 -322 -197 - - CDS 882 Putative regulatory proteins putative transcriptional regulator LYSR-type b1527 - -460 -210 -280 -262 -191 - - CDS 1116 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1528 ydeA -280 -31 -47 -201 -125 - - CDS 1191 "Cell processes (incl. adaptation, protection)" putative resistance / regulatory protein b1529 ydeB 215 168 257 48 -40 - - CDS 666 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1531 marA 567 550 744 188 -40 - - CDS 390 "Cell processes (incl. adaptation, protection)" multiple antibiotic resistance; transcriptional activator of defense systems b1532 marB -286 -160 -243 -253 -180 - - CDS 219 "Cell processes (incl. adaptation, protection)" multiple antibiotic resistance protein b1533 ydeD 497 116 51 -79 -216 - - CDS 801 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1534 ydeF 1749 1071 1368 1253 392 - - CDS 1188 "Hypothetical, unclassified, unknown" putative transport protein b1535 ydeH -623 -388 -347 -501 -253 - - CDS 891 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1536 ydeI -325 -191 -190 -249 -174 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1537 ydeJ 115 140 198 125 21 - - CDS 519 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1538 dcp 1382 620 636 710 155 - - CDS 2046 "Translation, post-translational modification" dipeptidyl carboxypeptidase II b1540 ydfH 618 253 256 78 -167 - - CDS 687 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1541 - -350 10 -112 -137 -165 - - CDS 204 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1542 ydfI 344 312 144 68 -60 - - CDS 1461 Putative enzymes putative oxidoreductase b1543 - -672 -312 -399 -294 -206 - - CDS 1284 Putative transport proteins putative transport protein b1544 ydfK 568 -123 -182 -206 -178 - - CDS 267 "orf, hypothetical protein" b1545 - 65 18 -34 -66 -130 - - CDS 591 "orf, hypothetical protein" b1546 ydfM 51 -115 -46 45 -107 - - CDS 576 "orf, hypothetical protein" b1547 - 80 5 -15 96 -78 - - CDS 963 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1548 nohA 65 119 87 274 182 - - CDS 570 homolog of Qin prophage packaging protein NU1 b1549 ydfO -383 -258 -307 -306 -204 - - CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1550 - -84 65 372 -179 -20 - - CDS 177 "orf, hypothetical protein" b1551 - -582 -485 -566 -542 -340 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1552 cspI 458 -129 -191 -170 -199 - - CDS 213 "Hypothetical, unclassified, unknown" cold shock-like protein b1553 - 356 -158 -232 -209 -202 - - CDS 498 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1554 - -239 -82 -69 -165 -87 - - CDS 534 "Hypothetical, unclassified, unknown" putative lysozyme b1555 - 40 -175 -175 -50 -143 - - CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1556 - 723 871 595 416 232 - - CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1558 cspF -3 -232 -305 -329 -252 - - CDS 213 Other known genes cold shock protein b1559 - -455 -216 -238 -416 -249 - - CDS 783 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1560 - -613 -321 -360 -420 -234 - - CDS 1089 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1561 rem -23 17 71 50 -117 - - CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1562 relF 8 66 18 -107 -133 - - CDS 156 "Cell processes (incl. adaptation, protection)" polypeptide destructive to membrane potential b1563 relE 1584 632 833 484 94 - - CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1565 - -624 -391 -413 -411 -245 - - CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1566 flxA -549 -240 -292 -292 -188 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1567 - -314 -193 -252 -272 -253 - - CDS 150 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1568 - -281 -32 19 -121 -131 - - CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1569 dicC 93 40 94 218 50 - - CDS 231 "Cell processes (incl. adaptation, protection)" regulator of dicB b1572 ydfB -310 -136 -193 -260 -157 - - CDS 171 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1573 ydfC -524 -200 -306 -275 -218 - - CDS 219 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1574 dicF 1510 693 970 1034 406 - - misc_RNA 53 "untranslated RNA, antisense inhibitor of FtsZ mRNA, involved in cell division" b1575 dicB -371 -135 -284 -210 -180 - - CDS 189 "Cell processes (incl. adaptation, protection)" inhibition of cell division b1576 ydfD -476 -253 -297 -283 -221 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1577 ydfE -695 -390 -444 -386 -257 - - CDS 921 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1578 - 312 353 328 -46 -195 - - CDS 657 "orf, hypothetical protein" b1579 - -208 -136 -184 -171 -111 - - CDS 1197 "phage, transposon, or plasmid" putative transposase b1580 rspB -715 -333 -394 -417 -259 - - CDS 1020 Regulatory function starvation sensing protein b1581 rspA -353 -215 -306 -224 -175 - - CDS 1215 Regulatory function starvation sensing protein b1585 ynfC 717 564 332 108 -39 - - CDS 747 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1587 - -755 -375 -541 -428 -357 - - CDS 2427 Energy metabolism "putative oxidoreductase, major subunit" b1588 - -771 -472 -534 -502 -312 - - CDS 2427 Energy metabolism "putative oxidoreductase, major subunit" b1589 - -664 -368 -463 -455 -328 - - CDS 618 "Hypothetical, unclassified, unknown" "putative oxidoreductase, Fe-S subunit" b1590 - -327 -209 -235 -425 -442 - - CDS 855 Energy metabolism putative DMSO reductase anchor subunit b1591 - 663 229 222 330 20 - - CDS 624 "Hypothetical, unclassified, unknown" putative oxidoreductase component b1592 - 473 337 231 441 153 - - CDS 1317 Putative transport proteins putative chloride channel b1593 - 25 117 57 -184 -169 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1594 mlc 1038 283 91 -101 -197 - - CDS 1221 Carbon compound catabolism putative NAGC-like transcriptional regulator b1596 ynfM 417 121 75 187 -14 - - CDS 1254 "Hypothetical, unclassified, unknown" putative transport protein b1597 asr 940 535 753 262 25 - - CDS 336 Other known genes acid shock protein b1599 - 141 72 14 5 -53 - - CDS 330 "Hypothetical, unclassified, unknown" possible chaperone b1600 - 190 20 -96 -222 -118 - - CDS 366 "Hypothetical, unclassified, unknown" possible chaperone b1601 - -536 -516 -388 -534 -309 - - CDS 1035 "Hypothetical, unclassified, unknown" putative transport protein b1602 pntB 362 567 455 -10 -88 - - CDS 1389 Central intermediary metabolism "pyridine nucleotide transhydrogenase, beta subunit" b1604 - 414 491 534 208 -31 - - CDS 945 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1605 - -118 -66 -218 -235 -225 - - CDS 1383 Amino acid biosynthesis and metabolism putative arginine/ornithine antiporter b1606 ydgB -218 34 -33 -234 -148 - - CDS 723 "Hypothetical, unclassified, unknown" putative oxidoreductase b1607 ydgC -290 -155 -336 -248 -263 - - CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1608 rstA 4 210 138 -79 -79 - - CDS 729 Putative regulatory proteins response transcriptional regulatory protein (RstB sensor) b1609 rstB 24 160 37 -83 -212 - - CDS 1302 Regulatory function sensor histidine protein kinase (RstA regulator) b1610 tus -472 -403 -224 -281 -280 - - CDS 930 "DNA replication, recombination, modification and repair" DNA-binding protein; inhibition of replication at Ter sites b1611 fumC 369 406 258 -21 -212 - - CDS 1404 Energy metabolism fumarase C= fumarate hydratase Class II; isozyme b1615 uidC -47 17 51 103 -27 - - CDS 1254 Membrane proteins membrane-associated protein b1616 uidB -68 -154 -140 -188 -274 - - CDS 1374 Transport and binding proteins glucuronide permease b1617 uidA 622 406 421 395 -16 - - CDS 1812 Carbon compound catabolism beta-D-glucuronidase b1620 malI 893 310 278 334 178 - - CDS 1029 Carbon compound catabolism repressor of malX and Y genes b1621 malX -81 -11 -72 -97 -133 - - CDS 1593 Transport and binding proteins "PTS system, maltose and glucose-specific II ABC" b1622 malY -119 -71 -201 -130 -203 - - CDS 1173 Carbon compound catabolism "enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase" b1624 - 712 631 478 320 -84 - - CDS 1080 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1625 - -199 -281 -253 -365 -346 - - CDS 216 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1626 - 189 230 299 341 52 - - CDS 465 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1627 - -212 -33 -72 -191 -229 - - CDS 582 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1628 - 140 67 169 264 -128 - - CDS 579 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1629 - -1009 -480 -581 -672 -373 - - CDS 2223 "Hypothetical, unclassified, unknown" putative membrane protein b1630 ydgO -316 -122 -156 -235 -217 - - CDS 1059 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1631 - -492 -154 -279 -271 -266 - - CDS 621 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1632 ydgQ 570 442 348 298 99 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1633 nth -786 -382 -435 -510 -278 - - CDS 636 "Transcription, RNA processing and degradation" endonuclease III; specific for apurinic and/or apyrimidinic sites b1634 ydgR -22 130 280 -32 -135 - - CDS 1503 Transport and binding proteins putative transport protein b1636 pdxY 741 160 224 73 -4 - - CDS 864 "Hypothetical, unclassified, unknown" pyridoxal kinase 2 / pyridoxine kinase b1639 ydhA 650 62 -245 491 -237 - - CDS 249 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1640 - 1436 1107 976 726 43 - - CDS 1110 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1643 - -478 -334 -422 -349 -253 - - CDS 237 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1644 - -194 -4 54 -87 -94 - - CDS 900 "Hypothetical, unclassified, unknown" putative membrane protein b1645 - 99 169 147 56 154 - - CDS 2013 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1648 - -483 -365 -502 -495 -317 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1649 - -339 -277 -197 -519 -329 - - CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1650 nemA 123 280 157 19 -53 - - CDS 1098 Energy metabolism N-ethylmaleimide reductase b1652 rnt 83 102 145 -70 -145 - - CDS 648 "DNA replication, recombination, modification and repair" "RNase T, degrades tRNA" b1653 lhr -821 -424 -509 -559 -320 - - CDS 4617 "DNA replication, recombination, modification and repair" member of ATP-dependent helicase superfamily II b1655 ydhO 973 618 715 411 -36 - - CDS 816 "Hypothetical, unclassified, unknown" putative lipoprotein b1657 - 145 -10 -15 61 -137 - - CDS 1170 "Hypothetical, unclassified, unknown" putative transport protein b1658 purR 724 267 290 210 -195 - - CDS 1026 Nucleotide biosynthesis and metabolism "transcriptional repressor for pur regulon, glyA, glnB, prsA, speA" b1659 ydhB 695 413 404 434 65 - - CDS 933 Putative regulatory proteins putative transcriptional regulator LYSR-type b1660 ydhC -450 -133 -154 -423 -457 - - CDS 1212 Putative transport proteins putative transport protein b1663 ydhE 543 319 392 332 57 - - CDS 1374 "Hypothetical, unclassified, unknown" putative transport protein b1664 - 1274 632 342 56 -340 - - CDS 1257 "Hypothetical, unclassified, unknown" possible enzyme b1668 - 146 120 -103 -147 -144 - - CDS 1605 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1669 - -407 -155 -324 -312 -373 - - CDS 813 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1670 ydhU -507 -227 -330 -304 -222 - - CDS 786 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1671 - -556 -236 -366 -347 -187 - - CDS 720 "Hypothetical, unclassified, unknown" "putative oxidoreductase, Fe-S subunit" b1672 - -297 146 -171 -189 -187 - - CDS 648 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1673 - -277 -134 -251 -253 -220 - - CDS 2103 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1674 - -88 166 -85 55 5 - - CDS 627 "Hypothetical, unclassified, unknown" "putative oxidoreductase, Fe-S subunit" b1675 - -338 -78 26 -237 -235 - - CDS 210 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1679 ynhA 990 734 704 307 -194 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1680 - 881 539 530 31 -218 - - CDS 1221 Putative enzymes "orf, hypothetical protein" b1683 ynhE 1598 779 606 181 -162 - - CDS 1527 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1685 - 135 304 328 56 -4 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1686 - 291 323 279 -24 -31 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1687 ydiJ 1461 1053 1161 823 295 - - CDS 3057 "Hypothetical, unclassified, unknown" putative oxidase b1688 - 883 504 492 307 -15 - - CDS 1113 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1689 - -58 -88 -148 -137 -125 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1690 - -418 -182 -255 -278 -238 - - CDS 1215 Putative transport proteins putative transport system permease protein b1691 - -433 -239 -364 -298 -188 - - CDS 1272 Putative transport proteins putative amino acid/amine transport protein b1692 ydiB -119 -82 -136 -53 -121 - - CDS 867 Putative enzymes putative oxidoreductase b1693 aroD 205 276 316 29 -77 - - CDS 759 Amino acid biosynthesis and metabolism 3-dehydroquinate dehydratase b1694 ydiF 603 407 226 312 51 - - CDS 1596 "Hypothetical, unclassified, unknown" putative enzyme b1695 - -273 5 -36 123 -15 - - CDS 1206 Putative enzymes putative oxidoreductase b1696 - -211 -52 -88 13 -41 - - CDS 912 "Hypothetical, unclassified, unknown" putative ARAC-type regulatory protein b1697 ydiQ -208 -115 -124 -107 -87 - - CDS 765 Energy metabolism putative transport protein b1698 ydiR -1142 -556 -626 -1051 -522 - - CDS 939 Energy metabolism putative flavoprotein b1699 ydiS 174 43 -70 44 -269 - - CDS 1290 "Hypothetical, unclassified, unknown" flavoprotein; probably electron transport b1701 ydiD 1369 708 637 878 313 - - CDS 1701 Central intermediary metabolism putative ligase/synthetase b1704 aroH -302 -43 -38 -253 -289 - - CDS 1047 Amino acid biosynthesis and metabolism "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible)" b1705 ydiE -196 -100 -210 -197 -217 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1706 - 1552 834 521 567 -193 - - CDS 1437 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1707 - 195 182 21 -40 -145 - - CDS 714 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1708 nlpC 248 249 148 37 24 - - CDS 465 Membrane proteins lipoprotein b1709 btuD -114 453 158 132 -180 - - CDS 750 Transport and binding proteins ATP-binding component of vitamin B12 transport system b1710 btuE 1263 1164 869 460 16 - - CDS 552 Transport and binding proteins vitamin B12 transport b1711 btuC 75 99 -29 -56 -224 - - CDS 981 Transport and binding proteins vitamin B12 transport permease protein b1714 pheS 441 922 424 367 -152 - - CDS 984 "Translation, post-translational modification" "phenylalanine tRNA synthetase, alpha-subunit" b1715 pheM -513 -271 -340 -336 -217 - - CDS 45 phenylalanyl-tRNA synthetase (pheST) operon leader peptide b1720 - -447 -267 -353 -313 -202 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1721 - -596 -309 -387 -324 -209 - - CDS 1416 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1722 - -398 -86 -107 -300 -90 - - CDS 759 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1726 - 1505 864 715 227 52 - - CDS 537 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1727 yniC 491 347 314 6 -171 - - CDS 669 "Hypothetical, unclassified, unknown" putative phosphatase b1728 - 210 300 278 303 33 - - CDS 603 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1729 - 767 600 466 403 92 - - CDS 1392 Putative transport proteins part of a kinase b1730 - -346 -155 -214 -228 -127 - - CDS 816 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1731 - 241 290 247 24 76 - - CDS 264 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1732 katE -214 -279 -345 -263 -459 - - CDS 2262 "Cell processes (incl. adaptation, protection)" catalase; hydroperoxidase HPII(III) b1733 ydjC -97 133 104 -44 -95 - - CDS 750 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1734 celF -239 -101 -196 -244 -283 - - CDS 1353 Carbon compound catabolism phospho-beta-glucosidase; cryptic b1735 celD 349 345 62 73 -84 - - CDS 843 Carbon compound catabolism negative transcriptional regulator of cel operon b1736 celC 1111 779 443 866 -55 - - CDS 351 Transport and binding proteins "PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin" b1737 celB -273 -36 -239 -212 -221 - - CDS 1359 Transport and binding proteins "PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin" b1741 - 375 182 55 55 6 - - CDS 888 "Hypothetical, unclassified, unknown" putative excinuclease subunit b1742 - -253 -154 -233 -143 -237 - - CDS 639 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1744 ydjS -77 9 -124 -125 -33 - - CDS 969 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1745 - 531 295 224 190 73 - - CDS 1344 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1746 - 518 470 437 294 85 - - CDS 1479 Putative enzymes putative aldehyde dehydrogenase b1747 - 742 679 607 574 203 - - CDS 1035 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1748 cstC 104 -577 -696 -729 -365 - - CDS 1221 Amino acid biosynthesis and metabolism acetylornithine delta-aminotransferase b1749 xthA 1186 737 836 211 82 - - CDS 807 "Transcription, RNA processing and degradation" exonuclease III b1750 ydjX -254 -88 -267 -202 -255 - - CDS 759 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1751 ydjY -221 -7 -129 -117 -90 - - CDS 840 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1752 ydjZ -518 -282 -376 -410 -293 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1753 ynjA 303 389 353 237 1 - - CDS 549 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1754 - -221 -40 -25 -202 -102 - - CDS 1170 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1755 - -692 -264 -304 -403 -302 - - CDS 1491 "Hypothetical, unclassified, unknown" putative transport system permease protein b1756 - -214 -68 85 -128 -90 - - CDS 654 Putative transport proteins putative ATP-binding component of a transport system b1757 - -197 -68 -155 -319 -173 - - CDS 1323 Central intermediary metabolism putative thiosulfate sulfur transferase b1758 - -13 171 46 -106 -62 - - CDS 627 Energy metabolism putative cytochrome oxidase b1759 - 9 -73 -42 -62 -66 - - CDS 408 Central intermediary metabolism "orf, hypothetical protein" b1760 - -453 -281 -381 -344 -335 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1762 - -412 -226 -244 -278 -203 - - CDS 1164 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1763 topB 791 850 662 206 26 - - CDS 1962 "DNA replication, recombination, modification and repair" DNA topoisomerase III b1766 sppA -148 -143 -242 -373 -703 - - CDS 1857 "Translation, post-translational modification" "protease IV, a signal peptide peptidase" b1767 ansA -80 292 203 -113 -102 - - CDS 1017 Amino acid biosynthesis and metabolism cytoplasmic L-asparaginase I b1768 ydjB 676 446 477 318 0 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1769 ydjE 65 98 -26 45 89 - - CDS 1359 "Hypothetical, unclassified, unknown" putative transport protein b1770 - -308 -152 -195 -152 -122 - - CDS 759 Putative regulatory proteins putative DEOR-type transcriptional regulator b1771 - -787 -307 -391 -446 -290 - - CDS 981 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1772 - -743 -414 -533 -481 -345 - - CDS 969 Carbon compound catabolism putative kinase b1773 - -538 -235 -313 -367 -190 - - CDS 837 Energy metabolism putative aldolase b1774 ydjJ -399 -160 -275 -264 -154 - - CDS 1044 Putative enzymes putative oxidoreductase b1775 - -320 -160 -264 -134 -192 - - CDS 1380 "Hypothetical, unclassified, unknown" putative transport protein b1776 - -260 -127 -185 -194 -76 - - CDS 1077 Putative enzymes putative oxidoreductase b1777 - 427 -6 5 -230 -149 - - CDS 318 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1778 yeaA 1279 384 326 98 62 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1781 - -3 110 -93 -197 -305 - - CDS 855 Putative enzymes putative an aldehyde reductase b1785 yeaI -304 -254 -265 -288 -224 - - CDS 1476 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1786 yeaJ -416 -171 -86 -244 -165 - - CDS 1671 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1787 yeaK 888 641 567 240 -57 - - CDS 504 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1788 - -478 -271 -272 -283 -181 - - CDS 153 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1789 yeaL 521 421 552 343 166 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1790 yeaM -915 -507 -597 -807 -280 - - CDS 822 "Hypothetical, unclassified, unknown" putative ARAC-type regulatory protein b1791 yeaN -12 129 107 -15 -127 - - CDS 1182 "Hypothetical, unclassified, unknown" putative amino acid/amine transport protein b1792 yeaO 1370 831 1084 168 -75 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1793 yoaF 268 472 665 -93 -22 - - CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1794 yeaP 529 330 536 -60 -252 - - CDS 1155 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1796 yoaG 315 294 463 515 -133 - - CDS 183 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1797 yeaR 946 928 1160 931 333 - - CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1798 yeaS -182 -54 65 -153 -139 - - CDS 639 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1799 yeaT 22 -147 -295 -407 -290 - - CDS 945 Putative regulatory proteins putative transcriptional regulator LYSR-type b1800 yeaU 84 118 0 -105 -192 - - CDS 1086 Amino acid biosynthesis and metabolism putative tartrate dehydrogenase b1801 yeaV -337 -123 -183 -181 -11 - - CDS 1446 Putative transport proteins putative transport protein b1802 yeaW -29 -17 -42 -33 -159 - - CDS 1125 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1803 yeaX 1300 1063 1075 1286 447 - - CDS 966 Putative enzymes putative diogenase beta subunit b1804 rnd 394 267 195 52 -72 - - CDS 1128 "DNA replication, recombination, modification and repair" "RNase D, processes tRNA precursor" b1805 fadD 148 206 136 182 -39 - - CDS 1686 Fatty acid and phospholipid metabolism "acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase" b1806 - -412 25 155 -50 -179 - - CDS 582 "Hypothetical, unclassified, unknown" putative outer membrane protein b1807 yeaZ 528 634 1006 304 32 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1808 - 576 511 526 376 -35 - - CDS 1911 "DNA replication, recombination, modification and repair" putative enzyme b1812 pabB 746 322 289 454 21 - - CDS 1362 "Biosynthesis of cofactors, prosthetic groups and carriers" "p-aminobenzoate synthetase, component I" b1813 yeaB 658 478 345 247 -12 - - CDS 579 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1814 sdaA 565 406 407 92 -117 - - CDS 1365 Amino acid biosynthesis and metabolism L-serine deaminase b1815 - 238 43 -42 54 -144 - - CDS 1629 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1816 yoaE 117 261 233 -41 -148 - - CDS 1557 "Hypothetical, unclassified, unknown" putative transport protein b1821 - -125 120 140 -117 -122 - - CDS 621 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1822 yebH 176 342 291 16 -110 - - CDS 810 "Hypothetical, unclassified, unknown" putative enzyme b1825 - 415 236 269 75 -118 - - CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1826 - 714 473 379 -95 -270 - - CDS 144 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1827 - 846 260 329 -13 -156 - - CDS 792 Putative regulatory proteins putative regulator b1828 - -3 -19 103 2 -54 - - CDS 1485 "Cell processes (incl. adaptation, protection)" putative transport protein b1829 htpX 1134 590 745 248 -138 - - CDS 882 "Cell processes (incl. adaptation, protection)" "heat shock protein, integral membrane protein" b1833 - -382 -197 -335 -469 -376 - - CDS 1284 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1834 - -418 -160 -216 -479 -277 - - CDS 2640 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1835 yebU 253 238 189 155 43 - - CDS 1446 Structural proteins putative nucleolar proteins b1838 pphA -444 -238 -265 -363 -200 - - CDS 660 "Hypothetical, unclassified, unknown" "protein phosphatase 1 modulates phosphoproteins, signals protein misfolding" b1842 holE 11 -208 -127 -305 -246 - - CDS 231 "DNA replication, recombination, modification and repair" "DNA polymerase III, theta subunit" b1843 - -139 -78 -162 -92 -173 - - CDS 657 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1844 - 776 680 523 411 98 - - CDS 663 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1845 ptrB 1489 578 511 897 16 - - CDS 2061 "Translation, post-translational modification" protease II b1849 purT -665 -419 -500 -402 -375 - - CDS 1179 Nucleotide biosynthesis and metabolism phosphoribosylglycinamide formyltransferase 2 b1852 zwf 1325 967 884 464 14 - - CDS 1476 Energy metabolism glucose-6-phosphate dehydrogenase b1853 yebK 636 404 174 -193 -225 - - CDS 870 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1856 yebA 360 239 302 200 -93 - - CDS 1260 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1857 yebL 1479 923 743 366 -18 - - CDS 987 "Hypothetical, unclassified, unknown" putative adhesin b1858 yebM 491 649 354 320 91 - - CDS 756 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b1859 yebI 835 1234 923 735 152 - - CDS 786 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1860 ruvB 256 558 306 64 -189 - - CDS 1011 "DNA replication, recombination, modification and repair" Holliday junction helicase subunit A; branch migration; repair b1861 ruvA 1136 896 648 137 -161 - - CDS 612 "DNA replication, recombination, modification and repair" Holliday junction helicase subunit B; branch migration; repair b1862 yebB -48 57 104 35 -51 - - CDS 702 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1863 ruvC 373 414 540 291 -46 - - CDS 522 "DNA replication, recombination, modification and repair" Holliday junction nuclease; resolution of structures; repair b1867 yecD 950 515 607 278 -8 - - CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1868 yecE -269 -154 -149 -140 -70 - - CDS 819 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1869 yecN 940 537 613 269 -146 - - CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1870 yecO 1132 890 815 675 26 - - CDS 744 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1871 yecP -42 84 34 -25 -223 - - CDS 972 "Hypothetical, unclassified, unknown" putative enzyme b1872 bisZ -17 66 94 152 -12 - - CDS 2448 Central intermediary metabolism biotin sulfoxide reductase 2 b1873 yecK 333 96 196 322 262 - - CDS 1101 Energy metabolism putative cytochrome C-type protein b1874 cutC -256 -146 -185 -229 -232 - - CDS 441 "Cell processes (incl. adaptation, protection)" copper homeostasis protein b1876 argS -688 -322 -411 -528 -347 - - CDS 1734 "Translation, post-translational modification" arginine tRNA synthetase b1877 yecT -531 -287 -355 -342 -236 - - CDS 510 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1878 flhE -230 -50 -156 -65 -93 - - CDS 393 "Hypothetical, unclassified, unknown" flagellar protein b1879 flhA -887 -480 -528 -764 -228 - - CDS 2079 Cell structure flagellar biosynthesis; possible export of flagellar proteins b1880 flhB -975 -462 -594 -628 -217 - - CDS 1149 "Cell processes (incl. adaptation, protection)" putative part of export apparatus for flagellar proteins b1881 cheZ -900 -379 -496 -635 -277 - - CDS 645 "Cell processes (incl. adaptation, protection)" chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator b1882 cheY 617 442 352 445 -69 - - CDS 390 "Cell processes (incl. adaptation, protection)" chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components b1883 cheB 1129 823 737 884 295 - - CDS 1050 "Cell processes (incl. adaptation, protection)" response regulator for chemotaxis (cheA sensor); protein methylesterase b1884 cheR 396 295 210 220 -29 - - CDS 861 "Cell processes (incl. adaptation, protection)" response regulator for chemotaxis; protein glutamate methyltransferase b1885 tap -29 -295 -277 -284 -380 - - CDS 1602 "Cell processes (incl. adaptation, protection)" "methyl-accepting chemotaxis protein IV, peptide sensor receptor" b1886 tar 311 151 116 -44 -153 - - CDS 1662 "Cell processes (incl. adaptation, protection)" "methyl-accepting chemotaxis protein II, aspartate sensor receptor" b1887 cheW 140 152 -22 -7 -38 - - CDS 504 "Cell processes (incl. adaptation, protection)" positive regulator of CheA protein activity b1888 cheA -129 60 -78 -35 -108 - - CDS 1965 "Cell processes (incl. adaptation, protection)" sensory transducer kinase between chemo- signal receptors and CheB and CheY b1889 motB -352 -65 -125 -153 -165 - - CDS 927 "Cell processes (incl. adaptation, protection)" "enables flagellar motor rotation, linking torque machinery to cell wall" b1890 motA -242 -76 -142 -228 -119 - - CDS 888 "Cell processes (incl. adaptation, protection)" proton conductor component of motor; no effect on switching b1891 flhC 287 226 200 242 -20 - - CDS 579 Cell structure regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor b1892 flhD 299 248 347 33 -138 - - CDS 360 Cell structure "regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor" b1893 insB_5 435 257 349 418 242 - - CDS 504 IS1 protein InsB b1894 insA_5 -110 192 -30 -130 -117 - - CDS 276 IS1 protein InsA b1895 yecG 268 200 -20 -167 -233 - - CDS 429 "Hypothetical, unclassified, unknown" putative regulator b1896 otsA 291 136 161 -15 -5 - - CDS 1425 "Cell processes (incl. adaptation, protection)" trehalose-6-phosphate synthase b1898 araH_2 181 92 -52 -152 -152 - - CDS 261 Transport and binding proteins "high-affinity L-arabinose transport system; membrane protein, fragment 2" b1899 araH_1 -105 -93 -193 -328 -244 - - CDS 705 "Hypothetical, unclassified, unknown" "high-affinity L-arabinose transport system; membrane protein, fragment 1" b1900 araG 285 95 69 -106 -166 - - CDS 1515 Transport and binding proteins ATP-binding component of high-affinity L-arabinose transport system b1901 araF 592 264 356 37 -211 - - CDS 990 Transport and binding proteins L-arabinose-binding periplasmic protein b1903 - 60 33 64 39 -75 - - CDS 339 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1904 - -349 -126 -191 -221 -122 - - CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1906 yecH -600 -325 -376 -337 -181 - - CDS 240 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1907 tyrP -5 -104 14 -44 -109 - - CDS 1212 Transport and binding proteins tyrosine-specific transport system b1912 pgsA 1639 784 594 57 -198 - - CDS 549 Fatty acid and phospholipid metabolism "phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase" b1915 yecF -151 7 62 -123 -149 - - CDS 225 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1916 sdiA 422 71 77 -15 -180 - - CDS 723 "Cell processes (incl. adaptation, protection)" transcriptional regulator of ftsQAZ gene cluster b1917 yecC 952 790 684 515 165 - - CDS 753 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b1918 yecS 409 475 317 135 -40 - - CDS 669 "Hypothetical, unclassified, unknown" putative transport system permease protein (former yecC) b1919 yedO 1517 895 798 557 55 - - CDS 1083 Putative enzymes putative 1-aminocyclopropane-1-carboxylate deaminase b1921 fliZ -151 -18 -48 -95 -146 - - CDS 588 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1922 fliA 387 118 85 89 -101 - - CDS 720 Cell structure flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons b1923 fliC 1294 899 604 607 35 - - CDS 1497 Cell structure "flagellar biosynthesis; flagellin, filament structural protein" b1924 fliD 182 72 -30 51 -11 - - CDS 1407 Cell structure flagellar biosynthesis; filament capping protein; enables filament assembly b1925 fliS -328 -249 -273 -335 -200 - - CDS 411 Cell structure flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) b1926 fliT 802 583 428 499 236 - - CDS 366 Cell structure flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) b1927 amyA 1348 865 862 388 97 - - CDS 1488 Carbon compound catabolism cytoplasmic alpha-amylase b1930 yedF 90 146 -1 -281 -309 - - CDS 234 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1931 yedK 680 370 350 408 67 - - CDS 654 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1932 yedL -175 -159 -239 -211 -158 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1933 - -453 -224 -269 -301 -175 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1934 yedN -645 -336 -415 -440 -250 - - CDS 321 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1935 yedM -371 -14 -206 -155 60 - - CDS 351 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1936 - -474 -47 -313 -310 -164 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1937 fliE 1466 1356 1439 1412 843 - - CDS 315 Cell structure "flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction" b1938 fliF 582 466 287 304 23 - - CDS 1659 Cell structure flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein b1939 fliG 798 606 602 518 -43 - - CDS 996 Cell structure "flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction" b1940 fliH 109 10 136 43 -17 - - CDS 708 Cell structure flagellar biosynthesis; export of flagellar proteins? b1941 fliI -42 65 -18 -93 -145 - - CDS 1374 "Cell processes (incl. adaptation, protection)" flagellum-specific ATP synthase b1942 fliJ 273 243 274 48 105 - - CDS 444 "Cell processes (incl. adaptation, protection)" flagellar fliJ protein b1943 fliK -226 -83 -134 -196 -197 - - CDS 1128 "Cell processes (incl. adaptation, protection)" flagellar hook-length control protein b1944 fliL -538 -389 -413 -503 -273 - - CDS 465 Cell structure flagellar biosynthesis b1945 fliM 213 135 120 167 -4 - - CDS 1005 Cell structure "flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction" b1946 fliN 39 -25 9 76 -55 - - CDS 414 Cell structure "flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction" b1947 fliO -59 70 -155 -154 -93 - - CDS 306 Cell structure flagellar biosynthesis b1948 fliP -96 -10 -77 -18 -143 - - CDS 738 Cell structure flagellar biosynthesis b1949 fliQ -502 -271 -327 -324 -263 - - CDS 270 Cell structure flagellar biosynthesis b1950 fliR -333 -187 -190 -218 -145 - - CDS 786 Cell structure flagellar biosynthesis b1951 rcsA -432 -227 -272 -276 -200 - - CDS 624 Cell structure "positive regulator for ctr capsule biosynthesis, positive transcription factor" b1952 dsrB 1627 1015 1594 545 196 - - CDS 189 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1953 - 959 217 286 -72 -85 - - CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1954 dsrA -517 -233 -355 -340 -211 - - misc_RNA 85 "untranslated RNA, low temp. response, activates RpoS H-NS antagonist, " b1956 - -307 -57 -257 -276 -353 - - CDS 1710 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1959 yedA 911 144 284 593 40 - - CDS 921 "Hypothetical, unclassified, unknown" putative transmembrane subunit b1960 vsr 1718 1003 836 815 210 - - CDS 471 "Transcription, RNA processing and degradation" "DNA mismatch endonuclease, patch repair protein" b1961 dcm -87 -70 -102 -403 -296 - - CDS 1419 "DNA replication, recombination, modification and repair" DNA cytosine methylase b1962 yedJ 171 122 174 53 -31 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1963 - 59 39 -101 -187 -264 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1964 - -34 -79 -165 -228 -178 - - CDS 516 "Hypothetical, unclassified, unknown" putative outer membrane protein b1965 - -80 -26 -86 -72 -82 - - CDS 210 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1966 - 24 -7 -34 21 10 - - CDS 405 "Hypothetical, unclassified, unknown" putative outer membrane protein b1968 yedV -397 -168 -239 -257 -197 - - CDS 1359 "Hypothetical, unclassified, unknown" putative 2-component sensor protein b1969 yedW 881 415 346 310 36 - - CDS 720 "Hypothetical, unclassified, unknown" putative 2-component transcriptional regulator b1970 - -68 95 -6 20 -63 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1971 - -127 -81 -161 -201 -186 - - CDS 1005 Putative enzymes putative reductase b1972 - -355 -339 -342 -390 -317 - - CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1973 - -261 -109 -150 -235 -193 - - CDS 651 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1974 yodB -380 -218 -194 -281 -194 - - CDS 561 "Hypothetical, unclassified, unknown" putative cytochrome b1978 - -200 14 -19 -146 -219 - - CDS 7152 "Hypothetical, unclassified, unknown" putative factor b1979 - -426 -179 -144 -230 -203 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1980 - -431 -285 -271 -263 -134 - - CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1981 shiA 367 196 236 114 -94 - - CDS 1317 "Cell processes (incl. adaptation, protection)" "putative transport protein, shikimate" b1982 amn 937 909 833 364 -45 - - CDS 1455 Nucleotide biosynthesis and metabolism AMP nucleosidase b1985 yeeO -361 -210 -301 -342 -403 - - CDS 1644 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1987 cbl -191 -112 -128 -97 -99 - - CDS 951 Putative regulatory proteins transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM b1988 nac 212 122 293 139 -47 - - CDS 918 Putative regulatory proteins nitrogen assimilation control protein b1990 erfK 707 188 116 -164 -215 - - CDS 933 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1991 cobT 779 792 491 331 -64 - - CDS 1080 "Biosynthesis of cofactors, prosthetic groups and carriers" nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase b1993 cobU 690 305 323 49 -55 - - CDS 546 "Biosynthesis of cofactors, prosthetic groups and carriers" cobinamide kinase/cobinamide phosphate guanylyltransferase b1995 - -457 -214 -330 -357 -208 - - CDS 420 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1997 yi21_3 1239 171 504 317 -8 - - CDS 411 IS2 hypothetical protein b1998 - 433 350 405 237 172 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1999 yeeP 319 164 86 254 69 - - CDS 711 Structural proteins putative histone b2000 flu -174 99 -41 -279 -100 - - CDS 3276 "Hypothetical, unclassified, unknown" "outer membrane fluffing protein, similar to adhesin" b2001 - -391 -266 -351 -499 -252 - - CDS 1539 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2002 yeeS -38 -5 -95 -41 -225 - - CDS 447 "DNA replication, recombination, modification and repair" "putative DNA repair protein, RADC family" b2003 yeeT -560 -383 -449 -533 -317 - - CDS 222 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2004 yeeU -242 -122 -270 -229 -199 - - CDS 369 Structural proteins putative structural protein b2005 yeeV -326 -235 -212 -289 -204 - - CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2006 yeeW 216 204 158 144 86 - - CDS 195 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2010 dacD 441 186 70 -38 -194 - - CDS 1173 Cell structure penicillin binding protein 6b b2011 sbcB 400 215 -7 19 -217 - - CDS 1428 "Transcription, RNA processing and degradation" "exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase" b2012 yeeD 84 115 10 32 -205 - - CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2013 yeeE -198 -273 -314 -243 -265 - - CDS 1059 "Hypothetical, unclassified, unknown" putative transport system permease protein b2014 yeeF -383 9 -62 -103 -166 - - CDS 1365 Putative transport proteins putative amino acid/amine transport protein b2015 yeeY 449 307 183 123 10 - - CDS 951 Putative regulatory proteins putative transcriptional regulator LYSR-type b2018 hisL 488 -98 -150 -297 -189 - - CDS 51 Amino acid biosynthesis and metabolism his operon leader peptide b2019 hisG 828 678 354 201 -106 - - CDS 900 Amino acid biosynthesis and metabolism ATP phosphoribosyltransferase b2020 hisD -514 -324 -489 -494 -279 - - CDS 1305 Amino acid biosynthesis and metabolism L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase b2021 hisC 194 114 -97 -189 -255 - - CDS 1071 Amino acid biosynthesis and metabolism histidinol-phosphate aminotransferase b2022 hisB 338 265 121 -155 -260 - - CDS 1071 Amino acid biosynthesis and metabolism imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase b2023 hisH 445 727 349 48 -220 - - CDS 591 Amino acid biosynthesis and metabolism glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme b2026 hisI 393 410 456 246 5 - - CDS 612 Amino acid biosynthesis and metabolism phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase b2028 ugd -421 -51 -29 -84 -119 - - CDS 1167 "Hypothetical, unclassified, unknown" UDP-glucose 6-dehydrogenase b2038 rfbC 740 688 538 942 19 - - CDS 558 Central intermediary metabolism "dTDP-6-deoxy-D-glucose-3,5 epimerase" b2043 wcaM 164 94 108 163 166 - - CDS 1395 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2044 wcaL 906 541 627 502 79 - - CDS 1221 Putative enzymes putative colanic acid biosynthesis glycosyl transferase b2045 wcaK -342 -154 -227 -130 -155 - - CDS 1281 Carbon compound catabolism putative galactokinase (EC 2.7.1.6). b2046 wzxC 549 421 290 389 192 - - CDS 1479 "Hypothetical, unclassified, unknown" probable export protein b2047 wcaJ 338 209 156 281 71 - - CDS 1395 Putative enzymes putative colanic acid biosynthsis UDP-glucose lipid carrier transferase b2048 cpsG 1611 1139 1073 959 561 - - CDS 1371 Central intermediary metabolism phosphomannomutase b2049 cpsB -728 -412 -487 -545 -346 - - CDS 1437 Central intermediary metabolism mannose-1-phosphate guanyltransferase b2050 wcaI -95 -36 -14 -99 -266 - - CDS 1224 "Hypothetical, unclassified, unknown" putative colanic biosynthesis glycosyl transferase b2051 wcaH 930 468 573 560 199 - - CDS 483 "Hypothetical, unclassified, unknown" GDP-mannose mannosyl hydrolase b2052 wcaG -164 -112 -195 -305 -159 - - CDS 966 "Hypothetical, unclassified, unknown" putative nucleotide di-P-sugar epimerase or dehydratase b2053 gmd -551 -208 -350 -445 -272 - - CDS 1122 Putative enzymes GDP-D-mannose dehydratase b2054 wcaF -459 -1425 -107 -191 -95 - - CDS 549 Putative enzymes putative transferase b2055 wcaE -843 -401 -442 -474 -287 - - CDS 747 Putative enzymes putative colanic acid biosynthesis glycosyl transferase b2056 wcaD -498 -234 -333 -282 -218 - - CDS 1218 Putative regulatory proteins putative colanic acid polymerase b2057 wcaC -961 -707 -783 -649 -300 - - CDS 1218 "Hypothetical, unclassified, unknown" putative glycosyl transferase b2058 wcaB -530 -388 -340 -266 -205 - - CDS 489 Amino acid biosynthesis and metabolism putative transferase b2059 wcaA -472 -175 -52 -125 -202 - - CDS 840 Cell structure putative regulator b2060 - -84 -34 -13 -34 -207 - - CDS 2199 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2061 wzb -494 -230 -250 -182 -213 - - CDS 444 Putative regulatory proteins probable protein-tyrosine-phosphatase b2062 wza -436 -148 -216 -253 -107 - - CDS 1140 Cell structure putative polysaccharide export protein b2063 yegH 1763 1255 1248 691 127 - - CDS 1650 "Hypothetical, unclassified, unknown" putative transport protein b2064 asmA 1028 1262 1115 910 111 - - CDS 1854 Putative enzymes suppressor of ompF assembly mutants b2066 udk -686 -312 -385 -565 -617 - - CDS 696 Central intermediary metabolism uridine/cytidine kinase b2067 yegE -22 123 167 65 -28 - - CDS 3318 Putative regulatory proteins putative sensor-type protein b2068 alkA 219 399 338 65 -56 - - CDS 849 "DNA replication, recombination, modification and repair" "3-methyl-adenine DNA glycosylase II, inducible" b2070 - 427 184 295 220 70 - - CDS 1947 Putative enzymes putative chaperonin b2071 - -163 -76 -59 -39 -135 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2072 - 662 364 282 375 93 - - CDS 762 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2073 - 71 62 35 115 23 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2074 - -324 -371 -418 -483 -423 - - CDS 1395 Putative transport proteins putative membrane protein b2075 yegN -1079 -685 -801 -885 -517 - - CDS 3123 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2076 yegO -194 7 -52 -72 -138 - - CDS 3078 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2077 yegB -94 36 -18 -76 -98 - - CDS 1416 Putative transport proteins putative transport protein b2078 baeS -181 -162 -84 -170 -229 - - CDS 1404 "Transcription, RNA processing and degradation" sensor protein (for BaeR) b2079 baeR -325 -246 -512 -778 -506 - - CDS 723 "Transcription, RNA processing and degradation" transcriptional response regulatory protein (sensor BaeS) b2081 yegQ 828 494 684 711 245 - - CDS 1362 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2082 ogrK 252 164 192 29 29 - - CDS 219 "phage, transposon, or plasmid" prophage P2 ogr protein b2083 - -586 -451 -432 -436 -263 - - CDS 147 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2084 - -47 -52 -130 -79 -154 - - CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2085 - -317 -178 -258 -195 -129 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2086 - 138 45 86 -5 -24 - - CDS 900 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2087 gatR_1 -61 214 336 428 34 - - CDS 447 Carbon compound catabolism "split galactitol utilization operon repressor, interrupted" b2088 - 513 149 249 467 25 - - CDS 309 "orf, hypothetical protein" b2089 tra5_4 512 24 330 565 -109 - - CDS 867 IS3 putative transposase b2093 gatB -5540 -6311 4266 12016 20292 - - CDS 285 Transport and binding proteins galactitol-specific enzyme IIB of phosphotransferase system b2098 yegT -127 -45 -10 -95 -111 - - CDS 1278 Putative transport proteins putative nucleoside permease protein b2099 - -192 -141 -166 -218 -180 - - CDS 1005 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2100 - 1314 983 1109 1087 408 - - CDS 966 Putative enzymes putative kinase b2101 yegW 145 -123 -109 -142 -194 - - CDS 747 "Hypothetical, unclassified, unknown" putative transcriptional regulator b2102 yegX 200 51 52 -70 -188 - - CDS 828 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2103 thiD -492 -297 -312 -293 -180 - - CDS 801 "Hypothetical, unclassified, unknown" phosphomethylpyrimidine kinase b2104 thiM 372 229 334 261 -50 - - CDS 789 Putative enzymes hydoxyethylthiazole kinase b2105 yohL 315 230 -77 183 -250 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2106 yohM -628 -291 -357 -437 -230 - - CDS 825 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2107 - -73 -9 4 -139 -162 - - CDS 519 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2108 yehA -56 7 3 -32 -12 - - CDS 1035 Cell structure putative type-1 fimbrial protein b2109 yehB -196 -63 -148 -266 -159 - - CDS 2481 "Hypothetical, unclassified, unknown" putative outer membrane protein b2110 yehC -513 -290 -331 -324 -172 - - CDS 720 Putative chaperones putative chaperone b2111 yehD -526 -281 -307 -289 -186 - - CDS 543 Cell structure putative fimbrial-like protein b2112 yehE 80 58 -53 -60 -141 - - CDS 282 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2114 metG 76 -50 -233 -416 -342 - - CDS 2034 "Translation, post-translational modification" methionine tRNA synthetase b2115 molR_1 -492 -247 -288 -211 -138 - - CDS 825 Transport and binding proteins "molybdate metabolism regulator, first fragment" b2116 molR_2 -1247 -640 -679 -857 -423 - - CDS 1938 Transport and binding proteins "molybdate metabolism regulator, second fragment 2" b2117 molR_3 -225 81 -100 -102 -2 - - CDS 1002 Transport and binding proteins "molybdate metabolism regulator, third fragment" b2118 yehI 8 166 83 179 232 - - CDS 3633 "Hypothetical, unclassified, unknown" putative regulator b2119 yehL -309 -136 -174 -209 -183 - - CDS 1155 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2120 yehM -394 -244 -253 -349 -278 - - CDS 2280 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2121 yehP 119 83 -28 -14 -42 - - CDS 1137 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2122 yehQ 379 2137 2014 2205 1870 - - CDS 1869 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2123 yehR -53 16 -37 13 4 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2124 yehS -343 71 -145 -399 -253 - - CDS 471 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2125 yehT 22 468 85 -86 -315 - - CDS 735 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2126 yehU 750 926 380 -16 -128 - - CDS 1686 "Hypothetical, unclassified, unknown" putative 2-component sensor protein b2127 yehV 299 401 112 88 -61 - - CDS 732 "Hypothetical, unclassified, unknown" putative transcriptional regulator b2128 yehW 1381 1357 785 719 -19 - - CDS 732 Putative transport proteins putative transport system permease protein b2129 yehX 430 561 357 248 43 - - CDS 927 Putative transport proteins putative ATP-binding component of a transport system b2131 yehZ 586 361 683 94 102 - - CDS 918 Putative transport proteins putative transport system permease protein b2132 bglX 1276 1266 1299 1017 627 - - CDS 2298 Carbon compound catabolism "beta-D-glucoside glucohydrolase, periplasmic" b2134 pbpG 1548 1064 1212 924 389 - - CDS 942 Cell structure penicillin-binding protein 7 b2135 yohC 838 432 382 256 31 - - CDS 612 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2136 yohD 1070 300 326 -26 -231 - - CDS 615 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2137 yohF 1478 1031 1162 710 210 - - CDS 762 Putative enzymes putative oxidoreductase b2138 yohG -306 -42 -117 -114 11 - - CDS 1197 Putative transport proteins putative channel/filament proteins b2139 yohH -57 -148 -128 -158 -84 - - CDS 291 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2140 yohI -308 -246 -281 -223 -101 - - CDS 948 Putative regulatory proteins putative regulator protein b2141 yohJ -870 -302 -423 -833 -589 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2142 yohK -262 69 -243 -461 -377 - - CDS 696 Putative transport proteins putative seritonin transporter b2143 cdd 579 281 322 147 -70 - - CDS 885 Nucleotide biosynthesis and metabolism cytidine/deoxycytidine deaminase b2144 sanA 156 43 42 -68 -174 - - CDS 720 "Cell processes (incl. adaptation, protection)" vancomycin sensitivity b2145 - -344 -136 -109 -299 -247 - - CDS 240 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2148 mglC -871 -362 -289 -717 -390 - - CDS 1011 Transport and binding proteins methyl-galactoside transport and galactose taxis b2149 mglA 586 383 196 259 4 - - CDS 1521 Transport and binding proteins ATP-binding component of methyl-galactoside transport and galactose taxis b2151 galS 1119 564 518 912 161 - - CDS 1041 Carbon compound catabolism "mgl repressor, galactose operon inducer" b2152 yeiB -429 -117 -148 -197 -171 - - CDS 1158 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2153 folE 675 1088 933 81 -217 - - CDS 669 "Biosynthesis of cofactors, prosthetic groups and carriers" GTP cyclohydrolase I b2155 cirA 1386 606 556 993 133 - - CDS 1992 Transport and binding proteins outer membrane receptor for iron-regulated colicin I receptor; porin; requires tonB gene product b2156 lysP -159 29 -8 -216 -150 - - CDS 1470 Transport and binding proteins lysine-specific permease b2157 yeiE 1352 900 650 446 4 - - CDS 882 Putative regulatory proteins putative transcriptional regulator LYSR-type b2158 yeiH -533 -196 -213 -319 -238 - - CDS 1050 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2159 nfo -116 87 -51 -465 -212 - - CDS 858 "Transcription, RNA processing and degradation" endonuclease IV b2160 yeiI -183 11 -132 -232 -251 - - CDS 1089 Carbon compound catabolism putative kinase b2161 yeiJ -281 -186 -145 -238 -144 - - CDS 1251 Putative transport proteins putative transport system permease protein b2162 yeiK 5 58 47 7 6 - - CDS 942 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2163 yeiL -436 -232 -278 -242 -167 - - CDS 660 Putative regulatory proteins putative transcriptional regulator b2164 yeiM -529 -268 -485 -659 -433 - - CDS 1251 Putative transport proteins putative transport system permease protein b2165 yeiN -344 -40 -148 -187 -166 - - CDS 939 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2166 yeiC -144 -12 -18 -18 -15 - - CDS 942 Putative enzymes putative kinase b2167 fruA -543 86 136 -648 -471 - - CDS 1692 Carbon compound catabolism "PTS system, fructose-specific transport protein" b2168 fruK 955 388 477 54 -211 - - CDS 939 Energy metabolism fructose-1-phosphate kinase b2169 fruB 900 194 107 112 -124 - - CDS 1131 Transport and binding proteins "PTS system, fructose-specific IIA/fpr component" b2170 yeiO -117 -77 -134 -129 -147 - - CDS 1182 Putative transport proteins putative transport b2171 yeiP 544 389 467 205 43 - - CDS 828 "Hypothetical, unclassified, unknown" putative elongation factor b2172 yeiQ 28 39 -44 -135 -166 - - CDS 1467 Carbon compound catabolism putative oxidoreductase b2174 - -484 -239 -276 -341 -227 - - CDS 750 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2176 rtn 387 262 33 102 -202 - - CDS 1557 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2177 yejA -104 -5 -82 -50 -105 - - CDS 1821 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2178 yejB 450 476 248 85 -30 - - CDS 1095 "Hypothetical, unclassified, unknown" putative transport system permease protein b2179 yejE -622 -220 -255 -430 -337 - - CDS 1026 Transport and binding proteins putative transport system permease protein b2180 yejF 35 147 259 169 -136 - - CDS 1590 Transport and binding proteins putative ATP-binding component of a transport system b2181 yejG -11 -47 7 -193 -65 - - CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2182 bcr -692 -263 -292 -519 -401 - - CDS 1191 "Cell processes (incl. adaptation, protection)" bicyclomycin resistance protein; transmembrane protein b2183 rsuA 155 190 62 -174 -336 - - CDS 696 "Hypothetical, unclassified, unknown" 16S pseudouridylate 516 synthase b2184 yejH 266 152 112 132 -35 - - CDS 1761 "DNA replication, recombination, modification and repair" putative ATP-dependent helicase b2186 yejK 1025 707 872 460 31 - - CDS 1008 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2187 yejL 374 451 299 -112 -245 - - CDS 228 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2188 yejM 208 429 428 21 -120 - - CDS 1761 Central intermediary metabolism putative sulfatase b2190 yejO 208 108 5 -121 -243 - - CDS 2511 "Translation, post-translational modification" putative ATP-binding component of a transport system b2191 - 129 115 171 131 -10 - - CDS 123 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2193 narP 1145 757 768 512 84 - - CDS 648 Energy metabolism nitrate/nitrite response regulator (sensor NarQ) b2194 ccmH 532 156 324 424 -48 - - CDS 1053 Energy metabolism possible subunit of heme lyase b2195 dsbE -150 -84 -44 -157 -186 - - CDS 558 Energy metabolism disulfide oxidoreductase (in biogenesis of cytochrome c? b2196 ccmF -111 -129 -199 -157 -220 - - CDS 1944 Energy metabolism cytochrome c-type biogenesis protein b2197 ccmE -135 -36 -182 -173 47 - - CDS 480 Energy metabolism "cytochrome c biogenesis, possible subunit of a heme lyase" b2198 ccmD -153 94 29 -112 -81 - - CDS 210 Energy metabolism heme exporter protein C b2199 ccmC -45 -10 -78 -202 -221 - - CDS 738 Energy metabolism heme exporter protein C b2200 ccmB 683 369 330 339 162 - - CDS 663 Energy metabolism "heme exporter protein B, cytochrome c-type biogenesis protein" b2201 ccmA -42 46 -53 -47 57 - - CDS 618 Energy metabolism ATP binding protein of heme exporter A b2202 napC 705 149 127 -63 -173 - - CDS 603 Energy metabolism cytochrome c-type protein b2203 napB 140 137 137 81 -79 - - CDS 471 Energy metabolism cytochrome c-type protein b2204 napH -703 -399 -442 -467 -243 - - CDS 864 Energy metabolism ferredoxin-type protein: electron transfer b2206 napA -377 -35 -83 -226 -197 - - CDS 2487 Energy metabolism probable nitrate reductase 3 b2207 napD 58 -34 103 4 -100 - - CDS 264 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2208 napF -206 -132 -207 -219 -118 - - CDS 495 Energy metabolism ferredoxin-type protein: electron transfer b2210 yojH -751 -377 -453 -494 -306 - - CDS 1647 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2211 yojI -91 -29 -118 -76 -189 - - CDS 1644 Putative transport proteins putative ATP-binding component of a transport system b2212 alkB 570 355 395 436 127 - - CDS 651 "DNA replication, recombination, modification and repair" DNA repair system specific for alkylated DNA b2213 ada 1660 965 980 973 444 - - CDS 1065 "DNA replication, recombination, modification and repair" O6-methylguanine-DNA methyltransferase; transcription activator/repressor b2214 yojL -583 -171 -166 -284 -230 - - CDS 1056 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2218 rcsC 645 944 631 385 35 - - CDS 2802 Cell structure "sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB" b2220 atoC 1088 601 423 159 -44 - - CDS 1386 Fatty acid and phospholipid metabolism "response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS)" b2221 atoD -779 -318 -324 -401 -291 - - CDS 663 Putative enzymes acetyl-CoA:acetoacetyl-CoA transferase alpha subunit b2222 atoA 1235 946 976 1190 825 - - CDS 651 Putative enzymes acetyl-CoA:acetoacetyl-CoA transferase beta subunit b2223 atoE -185 -117 -108 -95 -126 - - CDS 1323 "Hypothetical, unclassified, unknown" short chain fatty acid transporter b2224 atoB -225 -145 -29 -98 175 - - CDS 1185 Putative enzymes acetyl-CoA acetyltransferase b2225 - 205 48 84 98 -71 - - CDS 777 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2226 - 605 390 411 511 279 - - CDS 1650 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2227 - 351 168 147 174 41 - - CDS 486 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2228 - -969 -311 -628 -702 -764 - - CDS 4014 "Hypothetical, unclassified, unknown" putative membrane protein b2229 - -420 -185 -234 -243 -157 - - CDS 651 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2230 yfaA -823 -496 -569 -402 -267 - - CDS 1737 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2231 gyrA 1568 1279 1181 1248 300 - - CDS 2628 "DNA replication, recombination, modification and repair" "DNA gyrase, subunit A, type II topoisomerase" b2232 ubiG 276 258 442 -220 -126 - - CDS 723 "Biosynthesis of cofactors, prosthetic groups and carriers" 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase b2233 yfaL 1629 1090 956 1154 488 - - CDS 3753 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b2234 nrdA 103 483 -30 -250 66 - - CDS 2286 Nucleotide biosynthesis and metabolism "ribonucleoside diphosphate reductase 1, alpha subunit, B1" b2235 nrdB 825 605 501 144 -243 - - CDS 1131 Nucleotide biosynthesis and metabolism "ribonucleoside-diphosphate reductase 1, beta subunit, B2" b2236 yfaE -760 -381 -303 -533 -475 - - CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2237 inaA 1118 357 398 153 -141 - - CDS 651 "Cell processes (incl. adaptation, protection)" pH-inducible protein involved in stress response b2238 yfaH -453 -295 -309 -329 -278 - - CDS 207 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2239 glpQ 905 816 793 565 76 - - CDS 1077 Central intermediary metabolism "glycerophosphodiester phosphodiesterase, periplasmic" b2241 glpA 2 81 -62 -6 -216 - - CDS 1629 Energy metabolism "sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit" b2243 glpC -527 -382 -610 -517 -229 - - CDS 1191 Energy metabolism "sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit" b2244 yfaD -375 -188 -140 -252 -263 - - CDS 900 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2245 - -51 -45 39 -108 -107 - - CDS 804 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2246 - -1154 -558 -610 -722 -441 - - CDS 1329 Putative transport proteins putative transport protein b2247 - -82 -143 -193 -112 -150 - - CDS 1218 Putative enzymes putative racemase b2248 - 71 62 112 99 -7 - - CDS 783 Putative regulatory proteins putative regulator b2249 - 487 214 165 119 -89 - - CDS 1203 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2250 - -691 -413 -346 -488 -339 - - CDS 564 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2252 ais -490 -264 -370 -264 -241 - - CDS 603 Other known genes protein induced by aluminum b2253 - -737 -369 -496 -596 -207 - - CDS 1173 Cell structure putative enzyme b2254 - -390 -120 -271 -254 -232 - - CDS 969 Putative enzymes putative sugar transferase b2255 - 894 618 788 630 142 - - CDS 1983 Putative enzymes putative transformylase b2256 - 79 121 109 17 -25 - - CDS 891 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2257 - 661 327 301 342 119 - - CDS 1653 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2258 - -460 -303 -370 -374 -256 - - CDS 669 Putative transport proteins putative transport/receptor protein b2260 menE 464 138 142 472 -53 - - CDS 1356 "Biosynthesis of cofactors, prosthetic groups and carriers" o-succinylbenzoate-CoA ligase b2261 menC 1406 1007 1021 840 212 - - CDS 963 "Biosynthesis of cofactors, prosthetic groups and carriers" o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA b2263 yfbB -346 -22 -79 -299 -175 - - CDS 759 Putative enzymes putative enzyme b2264 menD 1047 480 608 666 201 - - CDS 1671 "Biosynthesis of cofactors, prosthetic groups and carriers" 2-oxoglutarate decarboxylase; SHCHC synthase b2265 menF 303 512 314 115 -217 - - CDS 1071 "Biosynthesis of cofactors, prosthetic groups and carriers" "isochorismate hydroxymutase 2, menaquinone biosynthesis" b2268 elaC 545 424 458 189 4 - - CDS 936 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2269 elaD -475 -167 -266 -257 -110 - - CDS 1212 Putative enzymes putative sulfatase / phosphatase b2270 yfbK -196 -64 -145 4 4 - - CDS 1728 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2271 yfbL -400 -195 -260 -265 -127 - - CDS 978 "DNA replication, recombination, modification and repair" putative aminopeptidase b2272 yfbM -766 -206 -262 -394 -347 - - CDS 504 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2273 yfbN -336 -91 -143 -85 -26 - - CDS 717 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2274 - -200 -61 -103 -138 -108 - - CDS 477 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2275 - -306 25 -136 -72 -109 - - CDS 852 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2290 - 820 540 473 159 -180 - - CDS 1218 Putative enzymes putative aminotransferase b2291 - 221 118 60 50 -91 - - CDS 600 Structural proteins putative alpha helix protein b2292 yfbS 22 14 -156 -243 -160 - - CDS 1833 "phage, transposon, or plasmid" putative transport protein b2297 pta -116 282 70 -43 -109 - - CDS 2145 Carbon compound catabolism phosphotransacetylase b2298 yfcC -391 -306 -305 -404 -178 - - CDS 1542 Putative enzymes putative S-transferase b2299 - 1123 895 938 658 224 - - CDS 543 Putative regulatory proteins putative regulator b2300 yfcE 1615 1164 980 359 -66 - - CDS 555 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2301 yfcF 621 367 268 206 -56 - - CDS 645 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2302 yfcG 842 173 171 -228 -217 - - CDS 648 Central intermediary metabolism putative S-transferase b2305 yfcI 763 280 355 332 -55 - - CDS 891 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2307 hisM 371 302 308 248 260 - - CDS 717 Transport and binding proteins "histidine transport, membrane protein M" b2308 hisQ 1671 603 498 615 186 - - CDS 687 Central intermediary metabolism histidine transport system permease protein b2309 hisJ 1460 629 513 272 33 - - CDS 783 Transport and binding proteins histidine-binding periplasmic protein of high-affinity histidine transport system b2310 argT -347 -149 -238 -274 -115 - - CDS 783 Transport and binding proteins "lysine-, arginine-, ornithine-binding periplasmic protein" b2311 ubiX -649 -208 -363 -390 -233 - - CDS 570 "Biosynthesis of cofactors, prosthetic groups and carriers" 3-octaprenyl-4-hydroxybenzoate carboxy-lyase b2312 purF -646 -345 -357 -354 -204 - - CDS 1518 Nucleotide biosynthesis and metabolism amidophosphoribosyltransferase = PRPP amidotransferase b2313 cvpA 182 199 214 30 -84 - - CDS 489 "phage, transposon, or plasmid" membrane protein required for colicin V production b2317 dedA 117 355 354 51 -116 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2319 usg 337 524 682 379 -66 - - CDS 1014 "Cell processes (incl. adaptation, protection)" putative PTS system enzyme II A component b2320 pdxB 481 491 558 212 -115 - - CDS 1137 "Biosynthesis of cofactors, prosthetic groups and carriers" erythronate-4-phosphate dehyrogenase b2321 div -282 -13 -53 -218 -390 - - CDS 996 "Cell processes (incl. adaptation, protection)" cell division protein b2322 - 195 151 115 46 37 - - CDS 1179 Putative transport proteins putative transport protein b2324 - -1155 -460 -682 -533 -397 - - CDS 2067 Putative enzymes putative peptidase b2325 - 259 273 408 201 -19 - - CDS 279 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2326 - 222 487 508 190 -123 - - CDS 549 Putative regulatory proteins putative transporting ATPase b2327 yfcA -859 -290 -600 -1045 -1412 - - CDS 810 Structural proteins putative structural protein b2328 mepA 285 313 222 217 -65 - - CDS 825 Cell structure "murein DD-endopeptidase, penicillin-insensitive" b2329 aroC 750 780 633 381 -177 - - CDS 1086 Amino acid biosynthesis and metabolism chorismate synthase b2330 yfcB 167 936 779 465 -80 - - CDS 1266 Putative enzymes putative adenine-specific methylase b2331 - 731 405 189 -443 -463 - - CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2332 - 438 66 199 -113 -166 - - CDS 837 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2333 - -638 -355 -335 -345 -171 - - CDS 540 Cell structure putative fimbrial-like protein b2334 - 48 -39 -57 93 -81 - - CDS 489 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2335 - 153 98 34 135 -67 - - CDS 513 Cell structure putative fimbrial protein b2336 yfcS -341 -68 -84 -177 -148 - - CDS 753 Putative chaperones putative chaperone b2337 - 835 455 284 476 177 - - CDS 897 "Hypothetical, unclassified, unknown" putative outer membrane protein b2338 yfcU -127 -111 -219 -208 -37 - - CDS 1737 Structural proteins putative outer membrane protein b2339 - -263 -168 -197 -192 -178 - - CDS 564 Cell structure putative fimbrial-like protein b2340 - 1100 608 730 457 -42 - - CDS 486 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2342 - 516 202 7 122 -37 - - CDS 1311 Central intermediary metabolism putative acyltransferase b2344 fadL -412 -175 -300 -334 -220 - - CDS 1347 Transport and binding proteins transport of long-chain fatty acids; sensitivity to phage T2 b2345 - -340 -190 -203 -234 -208 - - CDS 1059 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2347 yfdC 31 -21 -119 -62 -129 - - CDS 933 Putative transport proteins putative transport b2349 intC 18 99 57 -12 -121 - - CDS 1158 "phage, transposon, or plasmid" putative prophage Sf6-like integrase b2350 - 233 724 545 253 -72 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2351 - 204 534 548 176 -107 - - CDS 921 Cell structure putative glycan biosynthesis enzyme b2352 - -440 -218 -218 -280 -158 - - CDS 1332 "Hypothetical, unclassified, unknown" putative ligase b2353 - 629 432 677 328 188 - - CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2354 - -446 -316 -224 -303 -260 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2355 yfdL -431 -273 -267 -265 -177 - - CDS 519 Putative enzymes putative RNA polymerase beta b2356 yfdM -36 -78 -82 -70 -102 - - CDS 309 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2357 yfdN -1122 -560 -634 -742 -335 - - CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2358 yfdO 340 165 372 227 -13 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2359 - -280 -176 -351 -273 -351 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2360 - -403 -206 -213 -236 -171 - - CDS 825 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2361 - -275 -128 -159 -273 -174 - - CDS 564 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2362 - -263 -154 -223 -174 -30 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2363 - -201 -141 -236 -104 -115 - - CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2364 dsdC -335 -202 -312 -167 -119 - - CDS 936 Amino acid biosynthesis and metabolism D-serine dehydratase (deaminase) transcriptional activator b2365 dsdX -502 -348 -361 -362 -290 - - CDS 1338 Putative transport proteins transport system permease (serine?) b2366 dsdA 453 339 359 359 130 - - CDS 1329 Amino acid biosynthesis and metabolism D-serine dehydratase (deaminase) b2367 emrY -313 -177 -232 -196 -155 - - CDS 1539 "Cell processes (incl. adaptation, protection)" multidrug resistance protein Y b2368 emrK -281 -157 -205 -222 -114 - - CDS 1164 "Cell processes (incl. adaptation, protection)" multidrug resistance protein K b2370 evgS 455 360 375 272 83 - - CDS 3594 "Transcription, RNA processing and degradation" putative sensor for regulator EvgA b2371 yfdE -387 -186 -316 -256 -171 - - CDS 1185 "Hypothetical, unclassified, unknown" putative enzyme b2372 - -263 -170 -348 -181 -172 - - CDS 945 Putative transport proteins putative receptor protein b2373 - -620 -428 -483 -515 -316 - - CDS 1695 Putative enzymes putative enzyme b2374 - -294 -45 -222 -14 -80 - - CDS 1251 "Hypothetical, unclassified, unknown" putative enzyme b2375 - 412 194 137 310 -24 - - CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2376 - -511 -298 -382 -285 -162 - - CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2378 ddg 1135 413 200 192 -20 - - CDS 987 "Hypothetical, unclassified, unknown" putative heat shock protein b2379 - 1514 980 766 641 267 - - CDS 1239 Central intermediary metabolism putative aminotransferase b2380 - -128 -9 -82 -304 -355 - - CDS 1698 Putative regulatory proteins putative sensor protein b2381 - 122 214 122 -209 -227 - - CDS 735 "Hypothetical, unclassified, unknown" putative 2-component transcriptional regulator b2382 - 102 137 104 50 -12 - - CDS 858 Putative regulatory proteins putative ARAC-type regulatory protein b2383 - 402 373 245 289 123 - - CDS 2496 Central intermediary metabolism "putative PTS system enzyme IIA component, enzyme I" b2384 - -27 321 8 -44 -149 - - CDS 1038 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2385 - -411 -166 -207 -262 -202 - - CDS 1086 "Translation, post-translational modification" putative peptidase b2386 - -269 -13 -90 -142 -105 - - CDS 1248 "Hypothetical, unclassified, unknown" putative transport protein b2387 - -978 -546 -613 -749 -516 - - CDS 327 Transport and binding proteins putative PTS system enzyme IIB component b2389 - -343 -148 -206 -446 -198 - - CDS 1257 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2390 - -525 -461 -430 -538 -527 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2391 - -446 -234 -350 -356 -258 - - CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2392 - -6 -20 -19 -144 -79 - - CDS 1239 "Hypothetical, unclassified, unknown" putative transport system permease b2393 nupC 736 700 595 394 45 - - CDS 1203 Transport and binding proteins permease of transport system for 3 nucleosides b2394 yi81_3 648 528 526 720 -67 - - CDS 1119 IS186 hypothetical protein b2395 yfeA 283 299 289 101 60 - - CDS 2307 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2400 gltX 922 724 1136 321 42 - - CDS 1416 "Translation, post-translational modification" "glutamate tRNA synthetase, catalytic subunit" b2405 xapR 107 0 18 -105 -88 - - CDS 885 Central intermediary metabolism regulator for xapA b2406 xapB 541 370 308 255 92 - - CDS 1257 Transport and binding proteins xanthosine permease b2407 xapA -427 -218 -285 -249 -230 - - CDS 834 Central intermediary metabolism xanthosine phosphorylase b2408 yfeN 493 323 579 553 331 - - CDS 765 Putative enzymes putative sugar hydrolase b2409 yfeR 42 -62 -18 87 -34 - - CDS 927 Putative regulatory proteins putative transcriptional regulator LYSR-type b2411 lig 1090 917 902 1152 129 - - CDS 2016 "DNA replication, recombination, modification and repair" DNA ligase b2412 zipA 1394 1003 910 399 -176 - - CDS 987 Putative regulatory proteins cell division protein involved in FtsZ ring b2413 cysZ -113 14 -34 -119 -124 - - CDS 762 Central intermediary metabolism required for sulfate transport b2418 pdxK 641 490 310 101 -66 - - CDS 852 Putative enzymes pyridoxal/pyridoxine/pyridoxamine kinase b2419 yfeK -240 -70 87 91 -170 - - CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2420 - -11 -18 -25 35 -171 - - CDS 735 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2421 cysM -143 94 86 -237 -193 - - CDS 912 Amino acid biosynthesis and metabolism "cysteine synthase B, O-acetylserine sulfhydrolase B" b2422 cysA -304 -42 -295 -350 -234 - - CDS 1098 Transport and binding proteins ATP-binding component of sulfate permease A protein; chromate resistance b2423 cysW -117 47 -121 -168 -183 - - CDS 450 Transport and binding proteins sulfate transport system permease W protein b2424 cysU -115 -133 -147 -67 -191 - - CDS 834 Transport and binding proteins "sulfate, thiosulfate transport system permease T protein" b2425 cysP 405 125 64 -138 -90 - - CDS 1017 Transport and binding proteins thiosulfate binding protein b2427 yfeT 971 510 469 451 180 - - CDS 858 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2429 - 412 632 237 106 -57 - - CDS 1425 Putative enzymes putative PTS enzyme II b2430 - 490 484 345 54 -90 - - CDS 1392 "phage, transposon, or plasmid" putative beta-lactamase b2431 - 764 540 410 140 -164 - - CDS 927 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2432 - 643 603 865 572 110 - - CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2433 - 1196 1192 1242 741 275 - - CDS 456 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2434 - 804 573 536 134 -264 - - CDS 537 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2435 amiA 264 189 106 324 -219 - - CDS 870 Cell structure N-acetylmuramoyl-l-alanine amidase I b2436 hemF -724 -152 -209 -437 -232 - - CDS 900 "Biosynthesis of cofactors, prosthetic groups and carriers" coproporphyrinogen III oxidase b2437 yfeG -814 -374 -452 -355 -345 - - CDS 1053 "Hypothetical, unclassified, unknown" putative ARAC-type regulatory protein b2438 - 525 369 380 257 85 - - CDS 507 Structural proteins "orf, hypothetical protein" b2439 - -88 -61 -168 -208 -337 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2440 eutC 458 222 184 83 -171 - - CDS 888 Carbon compound catabolism "ethanolamine ammonia-lyase, light chain" b2441 eutB 816 721 624 228 61 - - CDS 1404 Carbon compound catabolism "ethanolamine ammonia-lyase, heavy chain" b2442 - -48 208 160 70 -159 - - CDS 1296 "phage, transposon, or plasmid" putative prophage integrase b2443 - 47 -72 -125 -267 -250 - - CDS 642 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2444 - -433 -225 -214 -275 -220 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2445 - -365 -178 -225 -270 -225 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2446 - -1108 -433 -665 -803 -583 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2447 - 248 162 172 156 97 - - CDS 594 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2448 - -584 -214 -302 -391 -246 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2449 - 98 -62 115 -285 -301 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2451 - -775 -377 -419 -457 -327 - - CDS 1404 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2452 eutH 833 491 451 728 339 - - CDS 1227 Carbon compound catabolism ethanolamine utilization; homolog of Salmonella putative transport protein b2453 eutG 35 148 174 115 201 - - CDS 1215 Carbon compound catabolism "ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase" b2454 eutJ 552 194 252 348 -45 - - CDS 837 Carbon compound catabolism ethanolamine utilization; homolog of Salmonella gene b2455 eutE -503 -354 -333 -343 -163 - - CDS 1404 Carbon compound catabolism ethanolamine utilization; similar to acetaldehyde dehydrogenase b2456 cchB 8 38 0 92 -22 - - CDS 288 "Hypothetical, unclassified, unknown" detox protein b2457 cchA 1027 618 761 506 273 - - CDS 336 "Hypothetical, unclassified, unknown" detox protein b2458 eutI -41 -5 96 6 -365 - - CDS 1017 Carbon compound catabolism ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase b2459 - -61 10 -12 -138 -135 - - CDS 804 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2460 - 665 509 442 546 122 - - CDS 702 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2461 - -532 -309 -329 -238 -240 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2462 - -410 -251 -280 -362 -256 - - CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2466 - -736 -413 -590 -438 -312 - - CDS 1044 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2467 yffH -386 0 -97 -303 -316 - - CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2468 yffG 1025 709 948 860 382 - - CDS 1980 Amino acid biosynthesis and metabolism "putative oxidoreductase, Fe-S subunit" b2469 narQ 42 182 195 79 -49 - - CDS 1701 Energy metabolism "sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL)" b2470 acrD -224 -96 -62 -201 104 - - CDS 3114 "Cell processes (incl. adaptation, protection)" "sensitivity to acriflavine, integral membrane protein, possible efflux pump" b2472 dapE 649 727 534 250 -142 - - CDS 1128 Amino acid biosynthesis and metabolism N-succinyl-diaminopimelate deacylase b2473 ypfH 1302 740 948 604 27 - - CDS 723 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2474 ypfI 316 224 180 69 -90 - - CDS 2016 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2476 purC 1162 1089 1032 766 353 - - CDS 714 Nucleotide biosynthesis and metabolism phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase b2481 hyfA -206 -207 -223 -135 -182 - - CDS 657 Energy metabolism hydrogenase 4 Fe-S subunit b2482 hyfB -584 -471 -269 -284 -24 - - CDS 2019 Energy metabolism hydrogenase 4 membrane subunit b2483 hyfC -506 -298 -292 -390 -117 - - CDS 969 Energy metabolism hydrogenase 4 membrane subunit b2484 hyfD -1590 -1003 -1128 -1069 -727 - - CDS 1440 Central intermediary metabolism hydrogenase 4 membrane subunit b2485 hyfE 16 12 -13 -62 -143 - - CDS 651 "Hypothetical, unclassified, unknown" hydrogenase 4 membrane subunit b2486 hyfF -390 -197 -319 -314 -204 - - CDS 1581 Energy metabolism hydrogenase 4 membrane subunit b2487 hyfG -1009 -496 -597 -565 -301 - - CDS 1668 Energy metabolism hydrogenase 4 subunit b2488 hyfH 132 57 -124 35 -139 - - CDS 546 Energy metabolism hydrogenase 4 Fe-S subunit b2490 - 205 380 268 254 118 - - CDS 477 "Translation, post-translational modification" putative protein processing element b2491 hyfR 341 262 150 150 59 - - CDS 1992 Central intermediary metabolism "putative 2-component regulator, interaction with sigma 54" b2492 focB -128 -15 -99 -161 -122 - - CDS 849 Putative transport proteins probable formate transporter (formate channel 2) b2493 perM -73 -87 -78 -234 -125 - - CDS 1062 "Hypothetical, unclassified, unknown" putative permease b2494 - 1498 1115 817 935 204 - - CDS 1464 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2495 - 662 515 346 469 69 - - CDS 360 Putative enzymes putative oxidoreductase b2496 - 1135 619 709 344 44 - - CDS 747 "DNA replication, recombination, modification and repair" putative DNA replication factor b2497 uraA -782 -431 -586 -552 -280 - - CDS 1290 Transport and binding proteins uracil transport b2499 purM -178 -106 -188 -129 -191 - - CDS 1038 Nucleotide biosynthesis and metabolism phosphoribosylaminoimidazole synthetase = AIR synthetase b2500 purN 1248 821 721 395 -49 - - CDS 639 Nucleotide biosynthesis and metabolism phosphoribosylglycinamide formyltransferase 1 b2502 ppx 633 770 758 178 -138 - - CDS 1542 Central intermediary metabolism exopolyphosphatase b2503 - -537 -138 -65 -160 -139 - - CDS 2244 "Hypothetical, unclassified, unknown" putative cytochrome C-type biogenesis protein b2504 - 44 177 98 -91 -80 - - CDS 192 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2505 - -574 -324 -398 -465 -247 - - CDS 519 Cell structure putative outer membrane lipoprotein b2506 - 291 145 175 23 -66 - - CDS 540 Structural proteins putative membrane protein b2507 guaA -314 497 258 -329 -328 - - CDS 1578 Nucleotide biosynthesis and metabolism GMP synthetase (glutamine-hydrolyzing) b2508 guaB 889 1060 758 149 -27 - - CDS 1467 Nucleotide biosynthesis and metabolism IMP dehydrogenase b2509 xseA -340 -50 226 -9 -242 - - CDS 1371 "Transcription, RNA processing and degradation" "exonuclease VII, large subunit" b2510 - -213 -77 -51 -10 -45 - - CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2511 - 926 824 1074 927 335 - - CDS 1512 Putative enzymes putative GTP-binding factor b2517 yfgB -255 129 59 -107 -193 - - CDS 1155 Putative enzymes "orf, hypothetical protein" b2518 ndk 358 117 229 -64 -147 - - CDS 432 Nucleotide biosynthesis and metabolism nucleoside diphosphate kinase b2519 pbpC 302 333 332 295 -155 - - CDS 2313 Cell structure putative peptidoglycan enzyme b2522 sseB 782 515 527 476 -10 - - CDS 786 Other known genes enhanced serine sensitivity b2525 fdx 802 1128 774 599 -146 - - CDS 336 Energy metabolism "[2FE-2S] ferredoxin, electron carrer protein" b2527 yfhE -164 -26 -84 -119 -288 - - CDS 516 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2531 - 1033 454 389 186 -407 - - CDS 489 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2533 suhB -311 -112 -240 -290 -270 - - CDS 804 Regulatory function "enhances synthesis of sigma32 in mutant; extragenic suppressor, may modulate RNAse III lethal action" b2534 - 334 211 235 194 110 - - CDS 882 Putative enzymes putative enzyme (3.4.-) b2536 hcaT -25 187 160 -88 46 - - CDS 1140 Central intermediary metabolism MFS (major facilitator superfamily) transporter b2537 hcaR 74 225 -6 92 -59 - - CDS 891 Putative regulatory proteins transcriptional activator of hca cluster b2538 hcaA1 -301 -134 -211 -295 -199 - - CDS 1362 Central intermediary metabolism large terminal subunit of phenylpropionate dioxygenase b2539 hcaA2 -228 -89 -67 -156 -121 - - CDS 519 Central intermediary metabolism small terminal subunit of phenylpropionate dioxygenase b2540 hcaC 399 805 845 710 513 - - CDS 321 Central intermediary metabolism ferredoxin subunit of phenylpropionate dioxygenase b2541 hcaB 223 214 276 149 123 - - CDS 813 Putative enzymes "2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase" b2542 hcaD -72 -144 -49 -138 -254 - - CDS 1203 Putative enzymes ferredoxin reductase subunit of phenylpropionate dioxygenase b2544 yphB 728 766 779 682 253 - - CDS 873 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2545 yphC -501 -127 -211 -164 -211 - - CDS 1095 Putative enzymes putative oxidoreductase b2546 yphD 39 9 -87 -11 -58 - - CDS 999 Putative transport proteins putative transport system permease protein b2547 yphE -725 -241 -217 -408 -168 - - CDS 1512 Putative transport proteins putative ATP-binding component of a transport system b2548 yphF 916 434 498 558 184 - - CDS 984 "Hypothetical, unclassified, unknown" putative LACI-type transcriptional regulator b2549 yphG 889 306 221 179 -25 - - CDS 3375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2550 yphH -285 -75 -52 -221 -230 - - CDS 1200 Carbon compound catabolism putative NAGC-like transcriptional regulator b2552 hmpA 1683 1124 1265 812 210 - - CDS 1191 Energy metabolism "dihydropteridine reductase, ferrisiderophore reductase activity" b2553 glnB 149 487 352 -183 -315 - - CDS 339 Amino acid biosynthesis and metabolism regulatory protein P-II for glutamine synthetase b2554 yfhA 679 679 913 591 38 - - CDS 1335 Central intermediary metabolism putative 2-component transcriptional regulator b2555 yfhG 1458 1163 1176 914 164 - - CDS 714 Structural proteins putative alpha helix protein b2556 yfhK 861 546 442 148 -160 - - CDS 1491 Putative regulatory proteins putative 2-component sensor protein b2557 purL -12 29 -20 -78 -107 - - CDS 3888 Nucleotide biosynthesis and metabolism phosphoribosylformyl-glycineamide synthetase = FGAM synthetase b2558 yfhD -530 -205 -235 -321 -133 - - CDS 1419 Putative enzymes putative periplasmic binding transport protein b2559 yfhC 308 307 188 34 -344 - - CDS 537 Putative enzymes putative deaminase b2560 yfhB 357 298 61 -288 -209 - - CDS 573 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2561 yfhH 577 334 368 255 -50 - - CDS 921 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2565 recO 438 466 390 216 73 - - CDS 729 "DNA replication, recombination, modification and repair" protein interacts with RecR and possibly RecF proteins b2566 era -451 51 -126 -392 -286 - - CDS 906 Regulatory function GTP-binding protein b2568 lepB -352 294 283 -452 -194 - - CDS 975 Transport and binding proteins leader peptidase (signal peptidase I) b2569 lepA 323 858 581 186 19 - - CDS 1800 "Translation, post-translational modification" "GTP-binding elongation factor, may be inner membrane protein" b2570 rseC 136 782 415 135 -228 - - CDS 480 Regulatory function "sigma-E factor, negative regulatory protein" b2571 rseB 596 1086 621 433 -104 - - CDS 957 Regulatory function regulates activity of sigma-E factor b2574 nadB -481 -138 -276 -370 -196 - - CDS 1623 "Biosynthesis of cofactors, prosthetic groups and carriers" "quinolinate synthetase, B protein" b2575 yfiC 1331 1259 1627 1106 593 - - CDS 858 "Hypothetical, unclassified, unknown" putative enzyme b2576 srmB 462 621 736 254 -31 - - CDS 1335 "Transcription, RNA processing and degradation" ATP-dependent RNA helicase b2577 yfiE 177 70 -64 -136 -152 - - CDS 927 Putative regulatory proteins putative transcriptional regulator LYSR-type b2578 yfiK -19 150 179 61 -174 - - CDS 588 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2579 yfiD 860 855 859 609 -92 - - CDS 384 Energy metabolism putative formate acetyltransferase b2582 trxC 402 -295 -69 -319 -202 - - CDS 420 Energy metabolism putative thioredoxin-like protein b2583 yfiP 235 214 268 216 105 - - CDS 723 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2586 yfiM -355 -152 -354 -287 -183 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2592 clpB 837 684 773 287 91 - - CDS 2574 "Translation, post-translational modification" heat shock protein b2593 yfiH 495 294 176 19 -92 - - CDS 732 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2594 sfhB 938 832 578 309 -40 - - CDS 981 Putative enzymes suppressor of ftsH mutation b2596 - -390 -250 -309 -326 -201 - - CDS 207 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2598 pheL -513 -271 -340 -336 -217 - - CDS 48 Amino acid biosynthesis and metabolism leader peptide of chorismate mutase-P-prephenate dehydratase b2599 pheA -132 -35 -126 -113 -177 - - CDS 1161 Amino acid biosynthesis and metabolism chorismate mutase-P and prephenate dehydratase b2600 tyrA 837 501 459 649 195 - - CDS 1122 Amino acid biosynthesis and metabolism chorismate mutase-T and prephenate dehydrogenase b2601 aroF 451 174 1 -70 -221 - - CDS 1071 Amino acid biosynthesis and metabolism "3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)" b2602 yfiL 227 67 -28 -34 -74 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2603 - 508 260 26 47 -128 - - CDS 519 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2604 yfiN 54 366 -65 -85 -249 - - CDS 1227 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2611 - -15 70 -201 -292 -269 - - CDS 867 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2612 ypjE 101 273 59 -49 -164 - - CDS 591 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2613 yfjD 22 123 121 -41 -189 - - CDS 684 "Hypothetical, unclassified, unknown" putative transport protein b2615 yfjB 115 238 63 -50 -220 - - CDS 879 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2616 recN 53 240 43 -176 -127 - - CDS 1662 "DNA replication, recombination, modification and repair" protein used in recombination and DNA repair b2618 - 1021 1131 1175 100 -218 - - CDS 309 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2621 ssrA -118 -5832 -8967 16083 17626 - - misc_RNA 466 "untranslated tmRNA, mediator of trans-translation reaction, stalled ribosome release, protein degradation" b2622 intA 696 495 -12 -235 -170 - - CDS 1242 "phage, transposon, or plasmid" prophage CP4-57 integrase b2623 yfjH -199 -129 -97 -183 -73 - - CDS 957 "DNA replication, recombination, modification and repair" putative histone b2624 alpA -1392 -681 -797 -1014 -461 - - CDS 213 "phage, transposon, or plasmid" prophage CP4-57 regulatory protein alpA b2625 yfjI -498 -283 -346 -321 -187 - - CDS 1410 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2626 yfjJ -554 -292 -348 -374 -225 - - CDS 627 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2627 yfjK -72 34 57 -102 -130 - - CDS 2190 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2628 yfjL -615 -124 -370 -585 -397 - - CDS 1617 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2629 yfjM -366 -167 -259 -309 -268 - - CDS 264 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2631 yfjO 325 257 221 13 -52 - - CDS 321 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2632 yfjP 170 88 99 208 -9 - - CDS 870 "Hypothetical, unclassified, unknown" putative GTP-binding protein b2633 yfjQ 175 254 370 398 165 - - CDS 822 "phage, transposon, or plasmid" "orf, hypothetical protein" b2634 yfjR -815 -328 -387 -493 -138 - - CDS 702 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2635 - -970 -536 -647 -646 -325 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2636 - -513 -271 -340 -336 -217 - - CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2637 yfjT -632 -389 -434 -523 -324 - - CDS 468 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2638 - 394 176 164 265 38 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2639 - -513 -227 -343 -336 -384 - - CDS 519 "Cell processes (incl. adaptation, protection)" putative pump protein b2640 - 384 289 221 175 -80 - - CDS 201 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2641 - -38 -117 17 202 -229 - - CDS 117 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2642 yfjW -465 -215 -271 -329 -188 - - CDS 1704 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2643 yfjX 596 404 334 496 149 - - CDS 459 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2644 yfjY -198 -101 -193 -104 -101 - - CDS 483 "DNA replication, recombination, modification and repair" putative DNA repair protein b2645 yfjZ -374 -237 -325 -321 -228 - - CDS 318 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2646 ypjF -631 -348 -400 -380 -261 - - CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2647 ypjA 1687 629 473 858 301 - - CDS 4710 "Translation, post-translational modification" putative ATP-binding component of a transport system b2648 - -484 -271 -349 -341 -192 - - CDS 144 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2649 - -489 -263 -323 -350 -165 - - CDS 792 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2650 - -491 -240 -292 -345 -186 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2651 - -487 -270 -310 -306 -167 - - CDS 132 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2653 - -228 -103 -174 -152 -60 - - CDS 174 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2654 - -483 -281 -313 -348 -236 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2655 - -691 -293 -322 -340 -192 - - CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2656 - -435 -291 -374 -333 -215 - - CDS 189 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2657 - -482 -280 -400 -309 -213 - - CDS 633 Putative enzymes putative enzyme b2658 - -486 -314 -412 -252 -224 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2659 - -317 -285 -307 -286 -278 - - CDS 1083 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2663 gabP -121 -38 -121 -205 -163 - - CDS 1401 Transport and binding proteins transport permease protein of gamma-aminobutyrate b2667 - -19 -229 -150 -300 -283 - - CDS 300 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2668 ygaP -219 -173 -7 -236 -229 - - CDS 525 Putative enzymes "orf, hypothetical protein" b2669 stpA 273 299 417 243 62 - - CDS 405 "DNA replication, recombination, modification and repair" DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing? b2670 - 383 72 110 -45 -131 - - CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2671 ygaC 635 915 1161 1155 372 - - CDS 345 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2673 nrdH -161 -220 -197 -243 -84 - - CDS 246 "Hypothetical, unclassified, unknown" glutaredoxin-like protein; hydrogen donor b2674 nrdI 22 82 26 -111 -93 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2675 nrdE -733 -448 -466 -608 -294 - - CDS 2145 Central intermediary metabolism "ribonucleoside-diphosphate reductase 2, alpha subunit" b2676 nrdF 159 50 59 120 -95 - - CDS 960 Central intermediary metabolism "ribonucleoside-diphosphate reductase 2, beta chain, frag" b2677 proV -111 -89 -196 -192 -182 - - CDS 1203 Transport and binding proteins "ATP-binding component of transport system for glycine, betaine and proline" b2678 proW -1953 -1059 -1276 -1471 -791 - - CDS 1065 Transport and binding proteins high-affinity transport system for glycine betaine and proline b2680 - -273 -75 -166 -225 -121 - - CDS 267 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2681 - -415 -208 -217 -256 -109 - - CDS 918 Putative transport proteins putative transport protein b2682 - 71 119 -83 -318 -287 - - CDS 738 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2685 emrA -768 -403 -455 -563 -370 - - CDS 1173 "Cell processes (incl. adaptation, protection)" multidrug resistance secretion protein b2686 emrB 1180 456 548 443 228 - - CDS 1539 "Cell processes (incl. adaptation, protection)" multidrug resistance; probably membrane translocase b2690 yqaB -94 97 -69 -301 -303 - - CDS 567 "Hypothetical, unclassified, unknown" putative phosphatase b2698 oraA -109 -11 -96 -116 -155 - - CDS 501 Putative regulatory proteins "regulator, OraA protein" b2701 mltB 1436 1198 1283 758 185 - - CDS 1086 Cell structure membrane-bound lytic murein transglycosylase B b2709 ygaA 740 336 430 251 103 - - CDS 1590 Putative regulatory proteins putative 2-component transcriptional regulator b2710 - 174 62 64 311 15 - - CDS 1440 Putative enzymes putative flavodoxin b2711 ygbD -612 -360 -464 -544 -482 - - CDS 1134 Putative enzymes putative oxidoreductase b2712 hypF 599 423 518 429 90 - - CDS 2253 Putative regulatory proteins transcriptional regulatory protein b2713 hydN -277 -9 -17 -112 -239 - - CDS 528 Energy metabolism "involved in electron transport from formate to hydrogen, Fe-S centers" b2715 ascF 808 396 359 727 95 - - CDS 1458 Transport and binding proteins "PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides" b2716 ascB -91 -29 -74 -11 -24 - - CDS 1425 Carbon compound catabolism 6-phospho-beta-glucosidase; cryptic b2717 hycI 874 361 401 283 -71 - - CDS 471 "Hypothetical, unclassified, unknown" protease involved in processing C-terminal end of the large subunit of hydrogenase 3 b2718 hycH 962 382 591 606 38 - - CDS 411 Energy metabolism processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) b2719 hycG 472 81 78 147 -21 - - CDS 768 Energy metabolism hydrogenase activity b2720 hycF -225 -48 -164 -4 -24 - - CDS 543 Energy metabolism probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) b2721 hycE -172 -184 -247 -104 -62 - - CDS 1710 Energy metabolism large subunit of hydrogenase 3 (part of FHL complex) b2722 hycD 587 363 415 454 138 - - CDS 924 Energy metabolism membrane-spanning protein of hydrogenase 3 (part of FHL complex) b2723 hycC -235 10 -67 -95 -299 - - CDS 1827 Energy metabolism membrane-spanning protein of hydrogenase 3 (part of FHL complex) b2724 hycB -27 -15 -138 -57 -122 - - CDS 612 Energy metabolism "probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)" b2725 hycA -324 -209 -302 -252 -210 - - CDS 462 Energy metabolism transcriptional repression of hyc and hyp operons b2726 hypA 898 315 260 215 -88 - - CDS 351 Energy metabolism pleiotrophic effects on 3 hydrogenase isozymes b2727 hypB -136 3 -121 -147 -164 - - CDS 873 Energy metabolism "guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3" b2728 hypC 40 -110 -184 -147 -200 - - CDS 273 Energy metabolism pleiotrophic effects on 3 hydrogenase isozymes b2729 hypD 1051 761 558 576 110 - - CDS 1122 Energy metabolism pleiotrophic effects on 3 hydrogenase isozymes b2730 hypE 598 370 442 396 -137 - - CDS 969 Energy metabolism plays structural role in maturation of all 3 hydrogenases b2731 fhlA 332 334 252 236 -12 - - CDS 2079 Energy metabolism "formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons" b2732 ygbA 181 75 242 30 -76 - - CDS 354 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2733 mutS 603 642 520 119 -46 - - CDS 2562 "DNA replication, recombination, modification and repair" methyl-directed mismatch repair b2734 pphB -401 -252 -335 -328 -210 - - CDS 657 Putative regulatory proteins protein phosphatase 2 b2736 - 260 329 245 248 60 - - CDS 909 Putative enzymes putative dehydrogenase b2737 - -447 -126 -203 -246 -191 - - CDS 1167 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2738 ygbL 620 431 316 286 -76 - - CDS 639 Putative enzymes putative epimerase/aldolase b2739 ygbM 90 219 61 126 -117 - - CDS 777 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2740 - -632 -110 -278 -362 -352 - - CDS 1365 Putative enzymes putative transport protein b2744 surE 611 373 -126 -523 -727 - - CDS 762 Other known genes survival protein b2746 ygbB 843 913 1120 599 63 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2747 ygbP -9 305 268 0 -104 - - CDS 711 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2749 ygbE -71 45 33 -173 -75 - - CDS 324 Energy metabolism putative cytochrome oxidase subunit b2750 cysC -796 -295 -378 -490 -343 - - CDS 606 Central intermediary metabolism adenosine 5'-phosphosulfate kinase b2751 cysN -591 -399 -584 -499 -368 - - CDS 1428 Central intermediary metabolism "ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase" b2752 cysD -485 -231 -336 -474 -343 - - CDS 909 Central intermediary metabolism "ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2" b2753 iap -575 -252 -239 -257 -211 - - CDS 1038 "Translation, post-translational modification" "alkaline phosphatase isozyme conversion, aminopeptidase" b2754 ygbF 1021 987 1059 1066 257 - - CDS 351 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2755 - 187 132 54 8 -69 - - CDS 918 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2756 - 1070 656 655 891 275 - - CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2757 - -792 -444 -468 -519 -513 - - CDS 681 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2758 - -464 -248 -333 -338 -209 - - CDS 1092 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2759 ygcK -136 -150 -165 -214 -109 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2760 - -284 -182 -233 -267 -160 - - CDS 1509 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2761 ygcB 770 502 339 301 229 - - CDS 2667 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2762 cysH 29 -30 -26 -43 -172 - - CDS 735 Central intermediary metabolism 3'-phosphoadenosine 5'-phosphosulfate reductase b2763 cysI 143 80 61 -134 -110 - - CDS 1713 Central intermediary metabolism "sulfite reductase, alpha subunit" b2764 cysJ 863 579 502 572 127 - - CDS 1800 Central intermediary metabolism "sulfite reductase (NADPH), flavoprotein beta subunit" b2765 ygcM -667 -347 -392 -518 -257 - - CDS 366 Central intermediary metabolism putative 6-pyruvoyl tetrahydrobiopterin synthase b2766 ygcN -181 105 -143 -183 -166 - - CDS 1302 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2767 ygcO -69 249 -98 -160 -365 - - CDS 297 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2769 ygcQ 1179 622 882 631 201 - - CDS 894 Energy metabolism putative flavoprotein b2770 ygcR 691 364 909 481 364 - - CDS 786 Energy metabolism putative transport protein b2772 - -454 -210 -177 -108 -216 - - CDS 795 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2774 ygcW -433 -311 -353 -298 -295 - - CDS 861 Putative enzymes putative oxidoreductase b2775 yqcE -378 -207 -327 -304 -181 - - CDS 1278 Putative transport proteins putative transport protein b2776 ygcE 301 115 150 188 -47 - - CDS 1479 Putative enzymes putative kinase b2777 ygcF 866 274 170 -183 -304 - - CDS 672 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2778 ygcG -428 -233 -338 -291 -167 - - CDS 942 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2782 chpA 1731 1567 1657 1401 -55 - - CDS 336 Other known genes "probable growth inhibitor, PemK-like, autoregulated" b2786 barA -153 151 94 -77 -193 - - CDS 2757 Regulatory function "sensor-regulator, activates OmpR by phophorylation" b2791 yqcB 11 -58 -99 -197 -185 - - CDS 783 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2793 syd 667 215 320 -29 -216 - - CDS 546 "Hypothetical, unclassified, unknown" interacts with secY b2794 yqcD 181 127 29 -157 -217 - - CDS 849 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2796 sdaC 152 195 62 -10 -163 - - CDS 1290 Transport and binding proteins probable serine transporter b2797 sdaB 552 304 267 392 88 - - CDS 1368 Amino acid biosynthesis and metabolism "L-serine dehydratase (deaminase), L-SD2" b2798 exo 313 124 133 55 -29 - - CDS 846 "Transcription, RNA processing and degradation" 5'-3' exonuclease b2799 fucO 554 151 143 84 -68 - - CDS 1152 Carbon compound catabolism "L-1,2-propanediol oxidoreductase" b2801 fucP -292 -30 -237 -249 -104 - - CDS 1317 Transport and binding proteins fucose permease b2802 fucI 125 636 234 145 -171 - - CDS 1776 Carbon compound catabolism L-fucose isomerase b2803 fucK 877 969 739 341 159 - - CDS 1449 Carbon compound catabolism L-fuculokinase b2806 ygdE 1411 908 1108 879 345 - - CDS 1101 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2807 ygdD 56 -140 -155 -656 -550 - - CDS 396 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2808 gcvA -780 -498 -528 -714 -380 - - CDS 918 Central intermediary metabolism positive regulator of gcv operon b2809 - 148 275 477 31 -59 - - CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2810 - 1416 867 966 170 -220 - - CDS 1206 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2811 ygdK 696 310 332 84 -147 - - CDS 444 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2812 ygdL -815 -340 -353 -704 -535 - - CDS 807 "Hypothetical, unclassified, unknown" putative enzyme b2813 mltA 328 189 192 -11 -396 - - CDS 1098 Cell structure membrane-bound lytic murein transglycosylase A b2818 argA 30 71 6 29 32 - - CDS 1332 Amino acid biosynthesis and metabolism N-acetylglutamate synthase; amino acid acetyltransferase b2819 recD 379 181 250 245 0 - - CDS 1827 "Transcription, RNA processing and degradation" "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" b2820 recB 736 543 570 587 186 - - CDS 3543 "Transcription, RNA processing and degradation" "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" b2821 ptr 2037 1402 1106 1086 -66 - - CDS 2889 "Translation, post-translational modification" protease III b2822 recC 991 748 636 487 98 - - CDS 3369 "Transcription, RNA processing and degradation" "DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease" b2823 ppdC -991 -411 -790 -1028 -400 - - CDS 324 Other known genes prepilin peptidase dependent protein C b2824 ygdB 1186 738 731 764 411 - - CDS 366 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2825 ppdB 1352 709 746 837 146 - - CDS 564 Other known genes prepilin peptidase dependent protein B b2826 ppdA 62 162 195 109 -47 - - CDS 471 Other known genes prepilin peptidase dependent protein A b2828 lgt -67 560 323 -268 -381 - - CDS 876 Fatty acid and phospholipid metabolism phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid b2829 ptsP 588 1012 135 57 -206 - - CDS 2247 Transport and binding proteins "PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins)" b2831 mutH -377 -88 -224 -308 -169 - - CDS 690 "DNA replication, recombination, modification and repair" methyl-directed mismatch repair b2832 - -325 -144 -139 -167 -116 - - CDS 714 Putative transport proteins putative transport protein b2835 ygeD -460 -254 -359 -381 -376 - - CDS 1194 "Cell processes (incl. adaptation, protection)" putative resistance proteins b2836 aas 1293 928 570 449 -55 - - CDS 2160 Fatty acid and phospholipid metabolism 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase b2837 galR 840 292 -62 -135 -308 - - CDS 1032 Carbon compound catabolism repressor of galETK operon b2838 lysA -31 44 -18 -25 -66 - - CDS 1263 Amino acid biosynthesis and metabolism diaminopimelate decarboxylase b2839 lysR 108 91 -69 114 -12 - - CDS 936 Amino acid biosynthesis and metabolism positive regulator for lys b2840 ygeA 144 -4 -36 -78 27 - - CDS 693 "Cell processes (incl. adaptation, protection)" putative resistance proteins b2841 araE -29 134 13 -61 -65 - - CDS 1419 Transport and binding proteins low-affinity L-arabinose transport system proton symport protein b2842 kduD -1263 -1057 -1045 -1187 -679 - - CDS 762 Central intermediary metabolism 2-deoxy-D-gluconate 3-dehydrogenase b2843 kduI 1 89 -24 -127 -133 - - CDS 837 Carbon compound catabolism homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase b2844 yqeF -329 -174 -288 -243 -280 - - CDS 1185 Fatty acid and phospholipid metabolism putative acyltransferase b2845 - -379 -96 -154 -309 -217 - - CDS 1230 Putative transport proteins putative transporter protein b2846 yqeH -438 -260 -327 -316 -177 - - CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2847 yqeI 82 62 38 -57 -90 - - CDS 810 Putative regulatory proteins putative sensory transducer b2848 yqeJ -556 -317 -327 -383 -249 - - CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2849 yqeK -424 -239 -242 -309 -176 - - CDS 438 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2850 ygeF -516 -279 -314 -321 -206 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2851 ygeG -199 -133 -176 -93 -17 - - CDS 492 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2852 ygeH -462 -265 -330 -280 -212 - - CDS 1377 Putative regulatory proteins putative invasion protein b2853 - -534 -295 -340 -359 -241 - - CDS 219 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2854 - -584 -301 -330 -385 -272 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2855 ygeK -500 -238 -310 -304 -180 - - CDS 447 Putative regulatory proteins putative 2-component transcriptional regulator b2856 - -551 -256 -336 -346 -202 - - CDS 156 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2857 - -531 -276 -369 -336 -228 - - CDS 432 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2858 - -501 -258 -310 -313 -226 - - CDS 222 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2859 - -408 -212 -281 -274 -193 - - CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2861 yi21_4 1130 111 368 101 -133 - - CDS 366 IS2 hypothetical protein b2862 - -493 -252 -333 -359 -191 - - CDS 300 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2863 - -326 -161 -222 -206 -243 - - CDS 837 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2867 ygeT 69 617 349 565 286 - - CDS 879 Putative enzymes putative dehydrogenase b2868 - 948 1114 1171 1545 542 - - CDS 480 Putative enzymes putative dehydrogenase b2872 ygeY 309 1724 1599 3561 1989 - - CDS 1212 Putative enzymes putative deacetylase b2873 - -143 504 462 629 144 - - CDS 1398 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2874 yqeA 295 507 787 1064 745 - - CDS 933 Putative enzymes putative kinase b2877 ygfJ 1381 265 106 -26 -179 - - CDS 579 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2881 - -298 133 202 493 321 - - CDS 2871 Putative enzymes putative dehydrogenase b2882 ygfO -676 -209 -115 277 170 - - CDS 1458 Putative transport proteins putative transport protein b2883 ygfP -321 -64 -47 606 632 - - CDS 1320 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2884 ygfQ -173 -78 -99 105 490 - - CDS 570 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2885 ygfR -545 -187 -242 -153 275 - - CDS 831 Putative enzymes putative oxidoreductase b2886 ygfS -658 -508 -480 -358 -341 - - CDS 492 Energy metabolism "putative oxidoreductase, Fe-S subunit" b2887 ygfT 1252 872 1048 723 477 - - CDS 1935 Putative enzymes "putative oxidoreductase, Fe-S subunit" b2888 ygfU -2 153 76 242 -119 - - CDS 1518 Putative transport proteins putative permease b2889 - 283 -40 -74 -148 -241 - - CDS 549 Putative enzymes putative enzyme b2890 lysS 748 818 888 555 92 - - CDS 1518 "Translation, post-translational modification" "lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA" b2892 recJ 868 712 792 627 79 - - CDS 1734 "Transcription, RNA processing and degradation" "ssDNA exonuclease, 5' --> 3' specific" b2895 fldB 1364 1068 1048 494 115 - - CDS 522 Energy metabolism flavodoxin 2 b2899 - 1742 594 269 162 -26 - - CDS 660 Putative enzymes putative oxidoreductase b2900 yqfB 1610 834 844 494 -20 - - CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2901 bglA 813 907 658 540 -4 - - CDS 1440 Carbon compound catabolism 6-phospho-beta-glucosidase A; cryptic b2902 ygfF -938 -167 11 -521 -334 - - CDS 744 Carbon compound catabolism putative oxidoreductase b2907 ubiH 893 595 376 18 -331 - - CDS 1179 "Biosynthesis of cofactors, prosthetic groups and carriers" "2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone" b2912 ygfA 292 102 -16 -143 -124 - - CDS 549 Putative enzymes putative ligase b2913 serA 1028 824 614 430 28 - - CDS 1233 Amino acid biosynthesis and metabolism D-3-phosphoglycerate dehydrogenase b2915 yqfE -961 -664 -766 -780 -559 - - CDS 231 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2916 iciA -123 -61 -185 -179 -178 - - CDS 894 "DNA replication, recombination, modification and repair" "replication initiation inhibitor, binds to 13-mers at oriC" b2917 sbm -653 -412 -437 -447 -264 - - CDS 2145 Fatty acid and phospholipid metabolism methylmalonyl-CoA mutase (MCM) b2918 ygfD -488 -229 -312 -265 -195 - - CDS 996 Putative transport proteins putative nucleotide-binding protein b2919 ygfG 312 330 364 255 200 - - CDS 828 Putative enzymes putative enzyme b2920 ygfH -603 -192 -153 -401 -195 - - CDS 1479 Putative enzymes putative coenzyme A transferase b2921 ygfI -100 -83 -166 -127 -198 - - CDS 912 Putative regulatory proteins putative transcriptional regulator LYSR-type b2923 yggA 929 325 455 193 -51 - - CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2924 yggB 1089 767 1122 681 449 - - CDS 861 Putative transport proteins putative transport protein b2928 yggC 13 67 -84 -162 -94 - - CDS 714 "Hypothetical, unclassified, unknown" putative kinase b2929 yggD 1408 775 558 403 72 - - CDS 510 Putative regulatory proteins putative transcriptional regulator b2930 yggF 10 -151 -163 -82 -257 - - CDS 966 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2931 - -70 6 15 -7 24 - - CDS 990 Putative enzymes putative oxidoreductase b2932 yggP -685 -268 -323 -331 -216 - - CDS 357 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2933 cmtA -159 -161 -176 -30 -40 - - CDS 1389 Transport and binding proteins "PTS system, mannitol-specific enzyme II component, cryptic" b2934 cmtB -189 -34 -145 -123 -138 - - CDS 444 Transport and binding proteins "PTS system, mannitol-specific enzyme II component, cryptic" b2938 speA 1065 1059 923 543 21 - - CDS 1977 Central intermediary metabolism biosynthetic arginine decarboxylase b2939 yqgB -146 217 186 65 -65 - - CDS 147 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2940 yqgC -330 -221 -246 -306 -163 - - CDS 216 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2941 yqgD -38 27 -50 -3 -57 - - CDS 252 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2942 metK 119 3 -134 -214 -288 - - CDS 1155 Central intermediary metabolism "methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes" b2943 galP -672 -307 -481 -499 -279 - - CDS 1395 Transport and binding proteins galactose-proton symport of transport system b2944 sprT -481 -218 -322 -352 -229 - - CDS 498 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2945 endA -372 -286 -344 -306 -257 - - CDS 708 "Transcription, RNA processing and degradation" DNA-specific endonuclease I b2948 yqgE 797 750 345 150 -263 - - CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2949 yqgF 488 853 452 155 -116 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2950 yggR 40 -91 -90 -140 -270 - - CDS 1026 Putative transport proteins putative protein transport b2951 yggS 1403 802 502 347 -6 - - CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2952 yggT 759 842 359 -27 -208 - - CDS 567 Putative transport proteins putative resistance protein b2953 yggU 879 871 821 547 90 - - CDS 303 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2954 yggV 1026 1055 740 696 50 - - CDS 594 Structural proteins putative ribosomal protein b2955 yggW -194 78 -2 -52 -119 - - CDS 1137 "Biosynthesis of cofactors, prosthetic groups and carriers" putative oxidase b2956 yggM 17 -100 -89 37 -16 - - CDS 1008 Structural proteins putative alpha helix chain b2957 ansB -199 11 -134 -68 -116 - - CDS 1047 Amino acid biosynthesis and metabolism periplasmic L-asparaginase II b2961 mutY 1400 913 914 826 109 - - CDS 1053 "DNA replication, recombination, modification and repair" adenine glycosylase; G.C --> T.A transversions b2963 mltC 710 499 462 386 -7 - - CDS 1083 "Hypothetical, unclassified, unknown" membrane-bound lytic murein transglycosylase C b2964 nupG 339 57 -74 -184 -220 - - CDS 1305 Transport and binding proteins "transport of nucleosides, permease protein" b2965 speC 688 474 401 478 257 - - CDS 2196 Central intermediary metabolism ornithine decarboxylase isozyme b2966 yqgA -144 226 165 -36 116 - - CDS 708 Putative transport proteins putative transport protein b2968 yghD -105 -94 -127 -160 -150 - - CDS 537 Transport and binding proteins putative secretion pathway protein b2969 yghE -359 13 -30 -225 -89 - - CDS 861 "Hypothetical, unclassified, unknown" putative general secretion pathway for protein export (GSP) b2970 - -619 -300 -444 -335 -260 - - CDS 867 Transport and binding proteins putative general secretion pathway for protein export (GSP) b2971 - -1136 -586 -642 -713 -389 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2972 - -1180 -688 -796 -764 -489 - - CDS 933 Putative enzymes putative peptidase b2973 - -476 -347 -308 -269 -267 - - CDS 2547 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2974 - -76 -9 -8 -59 -96 - - CDS 2028 Putative enzymes putative endoglucanase b2975 yghK -323 -87 -294 -45 -60 - - CDS 1683 Putative transport proteins putative permease b2976 glcB 277 739 653 1110 292 - - CDS 2172 Central intermediary metabolism malate synthase G b2979 glcD -223 -12 -113 -194 -279 - - CDS 1500 Carbon compound catabolism glycolate oxidase subunit D b2980 glcC -331 -191 -276 -383 -290 - - CDS 765 Carbon compound catabolism transcriptional activator for glc operon b2981 - 242 136 175 93 115 - - CDS 1173 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2983 yghQ -720 -174 -345 -677 -157 - - CDS 978 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2984 yghR 287 131 90 111 -43 - - CDS 759 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2985 yghS -258 -172 -174 -212 -143 - - CDS 714 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2986 yghT -949 -369 -519 -688 -370 - - CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2987 pitB -469 -280 -331 -313 -227 - - CDS 1500 Transport and binding proteins low-affinity phosphate transport b2988 gsp 451 443 228 253 -126 - - CDS 1860 Central intermediary metabolism glutathionylspermidine synthetase/amidase b2990 hybG 63 548 530 529 -109 - - CDS 249 Energy metabolism hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2 b2991 hybF -852 -95 -104 -456 -624 - - CDS 342 Energy metabolism may modulate levels of hydrogenease-2 b2993 hybD 1204 1934 1763 1243 -44 - - CDS 495 Energy metabolism probable processing element for hydrogenase-2 b2994 hybC 154 666 691 313 -197 - - CDS 1704 Energy metabolism "probable large subunit, hydrogenase-2" b2998 - -768 -409 -346 -511 -213 - - CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3000 - 1694 833 966 976 109 - - CDS 426 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3002 yqhA -24 -24 80 -212 -266 - - CDS 495 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3004 - -390 -181 -250 -163 -96 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3005 exbD -153 -240 -217 -255 -207 - - CDS 426 Transport and binding proteins uptake of enterochelin; tonB-dependent uptake of B colicins b3006 exbB -132 -292 -183 -358 -346 - - CDS 735 Transport and binding proteins uptake of enterochelin; tonB-dependent uptake of B colicins b3007 - -331 -207 -269 -251 -176 - - CDS 156 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3008 metC 120 154 34 73 60 - - CDS 1188 Amino acid biosynthesis and metabolism cystathionine beta-lyase (beta-cystathionase) b3010 yqhC 1155 2157 2244 2293 1197 - - CDS 1128 Putative enzymes putative ARAC-type regulatory protein b3013 yqhG 68 298 179 142 271 - - CDS 930 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3014 yqhH -339 -180 -247 -203 -189 - - CDS 258 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3015 - 20 168 2 98 -126 - - CDS 1242 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3016 ygiR 415 420 547 211 95 - - CDS 978 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3017 sufI 421 78 279 280 -17 - - CDS 1413 "Cell processes (incl. adaptation, protection)" suppressor of ftsI b3018 plsC 599 317 94 74 -151 - - CDS 738 Fatty acid and phospholipid metabolism 1-acyl-sn-glycerol-3-phosphate acyltransferase b3019 parC -1215 -446 -656 -821 -486 - - CDS 2259 "DNA replication, recombination, modification and repair" DNA topoisomerase IV subunit A b3020 - 484 506 253 165 -139 - - CDS 1608 "Translation, post-translational modification" putative transport periplasmic protein b3021 - 54 -114 -137 -187 -230 - - CDS 396 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3022 - -10 -73 -163 -217 -200 - - CDS 297 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3023 - 1131 680 658 430 264 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3025 ygiX 841 426 196 354 56 - - CDS 660 Putative regulatory proteins putative 2-component transcriptional regulator b3026 ygiY 137 109 96 74 -33 - - CDS 1350 Putative regulatory proteins putative 2-component sensor protein b3027 - -86 50 -47 117 -17 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3030 parE -166 529 682 96 -240 - - CDS 1893 "DNA replication, recombination, modification and repair" DNA topoisomerase IV subunit B b3036 ygiA 231 554 362 24 -145 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3038 ygiC 1243 2015 1086 -143 -256 - - CDS 1161 Putative enzymes putative synthetase/amidase b3039 ygiD 603 428 387 463 206 - - CDS 816 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3040 ygiE 808 265 140 -54 -161 - - CDS 774 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3043 ygiL -608 -270 -296 -376 -191 - - CDS 552 Cell structure putative fimbrial-like protein b3044 yi21_5 1130 111 368 101 -133 - - CDS 366 IS2 hypothetical protein b3046 yqiG -308 -105 -189 -235 -73 - - CDS 2466 Cell structure putative membrane protein b3047 yqiH -352 -149 -221 -208 -87 - - CDS 759 Cell structure putative membrane protein b3048 yqiI -478 -181 -278 -165 -62 - - CDS 1065 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3050 - -368 -185 -288 -216 -146 - - CDS 630 Putative enzymes putative oxidoreductase b3051 - 1001 637 683 837 276 - - CDS 1662 Structural proteins putative membrane protein b3052 - 192 308 329 104 -91 - - CDS 1434 Putative enzymes putative kinase b3054 ygiF 519 251 60 -197 -257 - - CDS 1302 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3055 ygiM 514 657 566 719 -16 - - CDS 621 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3056 cca 1539 1077 1099 1013 366 - - CDS 1239 "Translation, post-translational modification" tRNA nucleotidyl transferase b3057 bacA 54 62 -49 -118 -87 - - CDS 822 "Cell processes (incl. adaptation, protection)" bacitracin resistance; possibly phosphorylates undecaprenol b3058 ygiG 1012 445 381 140 -128 - - CDS 372 "Hypothetical, unclassified, unknown" putative kinase b3059 ygiH -789 -398 -445 -656 -415 - - CDS 618 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3060 ygiP -1026 -366 -364 -368 -236 - - CDS 933 Putative regulatory proteins putative transcriptional regulator LYSR-type b3061 ttdA -1060 -710 -830 -621 -500 - - CDS 912 Energy metabolism "L-tartrate dehydratase, subunit A" b3062 ttdB -438 -298 -326 -185 -242 - - CDS 606 Energy metabolism "L-tartrate dehydratase, subunit B" b3063 ygjE -630 -170 -341 -538 -269 - - CDS 1464 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3064 ygjD 874 452 399 138 -176 - - CDS 1014 "Translation, post-translational modification" putative O-sialoglycoprotein endopeptidase b3067 rpoD 1306 876 720 736 732 - - CDS 1842 "Transcription, RNA processing and degradation" "RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures" b3070 yqjH 283 83 98 77 -56 - - CDS 765 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3071 yqjI 833 437 486 323 57 - - CDS 624 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3072 aer 1592 770 831 788 320 - - CDS 1521 "Cell processes (incl. adaptation, protection)" "aerotaxis sensor receptor, flavoprotein" b3073 ygjG -890 -598 -911 -1414 -688 - - CDS 1491 Putative enzymes probable ornithine aminotransferase b3074 ygjH 1077 599 730 529 11 - - CDS 333 "Translation, post-translational modification" putative tRNA synthetase b3075 ebgR 1744 1016 1109 1208 390 - - CDS 984 Carbon compound catabolism regulator of ebg operon b3076 ebgA -319 -210 -215 -381 -154 - - CDS 3129 Carbon compound catabolism "evolved beta-D-galactosidase, alpha subunit; cryptic gene" b3077 ebgC -326 -253 -313 -224 -194 - - CDS 450 Carbon compound catabolism "evolved beta-D-galactosidase, beta subunit; cryptic gene" b3078 ygjI -983 -736 -723 -698 -311 - - CDS 1434 Putative enzymes putative oxidoreductase b3079 ygjJ -142 -25 -67 8 -17 - - CDS 1071 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3080 ygjK 521 398 587 299 18 - - CDS 2352 "Hypothetical, unclassified, unknown" putative isomerase b3081 ygjL -651 -333 -521 -307 -289 - - CDS 2019 Putative enzymes putative NADPH dehydrogenase b3082 ygjM 885 431 390 311 133 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3083 ygjN -248 -132 -156 -215 -177 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3084 ygjO -363 -154 -202 -192 -88 - - CDS 1167 "Hypothetical, unclassified, unknown" putative enzyme b3085 ygjP -115 -62 -87 -140 -138 - - CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3086 ygjQ 143 158 192 37 26 - - CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3088 ygjT -510 -428 -272 -300 -126 - - CDS 966 "Hypothetical, unclassified, unknown" putative transport protein b3089 ygjU -359 -163 -265 -222 -195 - - CDS 1245 Putative transport proteins putative transport protein b3090 ygjV -520 -320 -337 -310 -205 - - CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3091 uxaA -41 414 -109 -161 -444 - - CDS 1488 Carbon compound catabolism altronate hydrolase b3096 yqjB 417 387 298 62 -130 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3101 yqjF 389 494 356 232 0 - - CDS 483 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3102 yqjG 495 489 359 224 1 - - CDS 987 Putative enzymes putative transferase b3103 yhaH 775 548 402 146 -60 - - CDS 366 Energy metabolism putative cytochrome b3104 yhaI -689 -323 -392 -443 -285 - - CDS 357 Energy metabolism putative cytochrome b3105 yhaJ -272 -147 -172 -221 -220 - - CDS 897 Putative regulatory proteins putative transcriptional regulator LYSR-type b3106 yhaK -169 -124 -137 -273 -32 - - CDS 702 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3108 yhaM 1525 969 923 606 245 - - CDS 567 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3109 yhaN 137 97 21 -162 -112 - - CDS 564 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3110 yhaO 538 380 249 213 38 - - CDS 1278 Putative regulatory proteins putative transport system permease protein b3119 tdcR -498 -269 -316 -325 -193 - - CDS 345 Amino acid biosynthesis and metabolism threonine dehydratase operon activator protein b3120 yhaB -417 -249 -283 -263 -216 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3121 yhaC -456 -272 -337 -336 -196 - - CDS 1188 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3122 - 886 922 779 423 258 - - CDS 165 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3132 agaZ 12 -258 -350 -322 -367 - - CDS 1281 Carbon compound catabolism putative tagatose 6-phosphate kinase 2 b3133 agaV -199 -176 -240 -175 -281 - - CDS 510 Central intermediary metabolism "PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)" b3134 agaW -1524 -668 -871 -1002 -709 - - CDS 402 Central intermediary metabolism PTS system N-acetylgalactosameine-specific IIC component 2 b3135 agaA 473 345 169 200 -18 - - CDS 504 Central intermediary metabolism putative N-acetylgalactosamine-6-phosphate deacetylase b3136 agaS -8 -3 -65 -39 -131 - - CDS 1155 Central intermediary metabolism putative tagatose-6-phosphate aldose/ketose isomerase b3137 agaY -446 -247 -323 -263 -111 - - CDS 861 Central intermediary metabolism tagatose-bisphosphate aldolase 2 b3138 agaB -366 -221 -295 -284 -177 - - CDS 477 Central intermediary metabolism "PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA)" b3139 agaC -240 -176 -207 -252 -226 - - CDS 804 Central intermediary metabolism PTS system N-acetylgalactosamine-specific IIC component 1 b3140 agaD -675 -493 -563 -459 -307 - - CDS 792 Central intermediary metabolism "PTS system, N-acetylglucosamine enzyme IID component 1" b3141 agaI -124 -53 -168 -231 -180 - - CDS 756 Central intermediary metabolism putative galactosamine-6-phosphate isomerase b3142 yraH -173 -45 -108 -167 -118 - - CDS 585 Cell structure putative fimbrial-like protein b3143 yraI -329 -163 -162 -168 -154 - - CDS 696 Putative chaperones putative chaperone b3144 yraJ -494 -263 -281 -298 -251 - - CDS 2517 Cell structure putative outer membrane protein b3145 yraK 147 175 82 110 140 - - CDS 1092 Cell structure putative fimbrial protein b3146 yraL -857 -413 -473 -661 -438 - - CDS 861 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3147 yraM -403 414 -114 -575 -525 - - CDS 2037 Energy metabolism putative glycosylase b3148 yraN 736 805 336 314 -306 - - CDS 396 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3151 yraQ -14 258 149 95 -76 - - CDS 1041 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3152 yraR 1744 1170 978 905 780 - - CDS 681 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3153 yhbO 1264 623 645 560 144 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3154 yhbP 591 360 428 204 -17 - - CDS 444 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3155 yhbQ 18 19 172 49 -53 - - CDS 303 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3158 yhbU -549 -331 -382 -287 -221 - - CDS 996 "Translation, post-translational modification" putative collagenase b3159 yhbV -88 -135 -51 5 -214 - - CDS 897 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3160 yhbW -94 88 -114 -108 -299 - - CDS 1008 Putative enzymes putative enzyme b3161 mtr 257 -76 -40 114 -112 - - CDS 1245 Transport and binding proteins tryptophan-specific transport protein b3162 deaD 713 821 711 690 328 - - CDS 1941 "Transcription, RNA processing and degradation" inducible ATP-independent RNA helicase b3165 rpsO 1086 906 1067 368 137 - - CDS 270 "Translation, post-translational modification" 30S ribosomal subunit protein S15 b3167 rbfA 970 978 609 546 -159 - - CDS 402 "Translation, post-translational modification" ribosome-binding factor A b3172 argG -27 46 -16 -133 -106 - - CDS 1344 Amino acid biosynthesis and metabolism argininosuccinate synthetase b3173 yhbX -235 -204 -240 -236 -144 - - CDS 1644 Putative enzymes putative alkaline phosphatase I b3177 folP 675 354 2 -239 -463 - - CDS 894 "Biosynthesis of cofactors, prosthetic groups and carriers" "7,8-dihydropteroate synthase" b3182 dacB -127 -37 -86 -133 -175 - - CDS 1434 Cell structure "D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4" b3183 yhbZ 426 -61 480 288 189 - - CDS 1173 Other known genes putative GTP-binding factor b3184 yhbE 516 447 625 50 -256 - - CDS 966 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3188 nlp -122 46 -31 -27 -197 - - CDS 279 Carbon compound catabolism regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu b3189 murA 1244 980 1170 937 219 - - CDS 1260 Cell structure first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase b3190 yrbA 518 654 786 165 -196 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3193 yrbD 1232 1092 779 623 -52 - - CDS 552 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3194 yrbE 1023 1006 862 703 224 - - CDS 783 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3196 yrbG -372 4 -124 -255 -281 - - CDS 978 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3197 yrbH 88 286 -21 -143 -519 - - CDS 987 Putative enzymes putative isomerase b3199 yrbK 1311 1223 864 1016 -137 - - CDS 576 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3200 yhbN 704 1407 734 721 -297 - - CDS 558 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3201 yhbG 1982 2057 1353 1890 -22 - - CDS 726 Putative transport proteins putative ATP-binding component of a transport system b3206 ptsO 1310 1172 1441 1691 255 - - CDS 273 Transport and binding proteins "phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr" b3208 mtgA 1091 1208 1166 871 -233 - - CDS 729 Cell structure putative peptidoglycan enzyme b3211 yhcC 243 -41 44 133 -93 - - CDS 930 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3212 gltB 967 529 401 461 -23 - - CDS 4554 Central intermediary metabolism "glutamate synthase, large subunit" b3213 gltD 775 641 712 661 59 - - CDS 1419 Central intermediary metabolism "glutamate synthase, small subunit" b3214 gltF -379 -219 -265 -247 -195 - - CDS 765 Central intermediary metabolism "regulator of gltBDF operon, induction of Ntr enzymes" b3215 yhcA -626 -353 -394 -401 -256 - - CDS 675 Putative chaperones putative chaperone b3216 yhcD -93 18 -8 -127 -161 - - CDS 2382 "Hypothetical, unclassified, unknown" putative outer membrane protein b3217 yhcE 227 227 252 209 34 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3219 yhcF -700 -455 -436 -532 -365 - - CDS 717 "Hypothetical, unclassified, unknown" putative transcriptional regulator b3220 yhcG -117 -7 -73 -54 -29 - - CDS 1128 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3221 yhcH 430 363 425 -119 -113 - - CDS 465 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3224 nanT 833 -9 -144 -887 -767 - - CDS 1521 Cell structure sialic acid transporter b3226 yhcK 652 400 233 -51 -177 - - CDS 792 Putative regulatory proteins putative FADA-type transcriptional regulator b3227 yhcL -777 -252 -235 -691 -512 - - CDS 1368 Putative transport proteins putative transport protein b3232 yhcM 251 125 171 -13 -123 - - CDS 1128 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3234 degQ 699 491 486 454 118 - - CDS 1368 "Translation, post-translational modification" serine endoprotease b3235 degS 165 235 244 122 48 - - CDS 1068 "Translation, post-translational modification" protease b3237 argR 729 122 147 120 -120 - - CDS 471 Amino acid biosynthesis and metabolism repressor of arg regulon; cer-mediated site specific recombination b3238 yhcN -218 -163 -198 -181 -58 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3239 yhcO 927 293 372 348 -31 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3240 yhcP -160 -52 -112 -37 -53 - - CDS 1968 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3241 yhcQ -90 -63 -151 -140 -180 - - CDS 933 Putative enzymes putative membrane protein b3242 yhcR -176 80 -88 -89 -29 - - CDS 273 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3243 yhcS 720 370 275 329 -12 - - CDS 930 Putative regulatory proteins putative transcriptional regulator LYSR-type b3245 yhdP 777 483 494 495 111 - - CDS 2961 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3246 yhdR 347 328 122 271 -86 - - CDS 849 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3247 cafA 655 413 436 410 -43 - - CDS 1488 "Cell processes (incl. adaptation, protection)" bundles of cytoplasmic filaments b3249 mreD 579 392 245 83 -83 - - CDS 489 Cell structure rod shape-determining protein b3250 mreC 240 692 410 307 58 - - CDS 1104 Cell structure rod shape-determining protein b3252 yhdA 221 371 249 289 -56 - - CDS 1941 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3254 - -602 -360 -396 -416 -267 - - CDS 102 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3256 accC 522 992 721 388 78 - - CDS 1350 Fatty acid and phospholipid metabolism "acetyl CoA carboxylase, biotin carboxylase subunit" b3257 yhdT 75 131 168 27 -224 - - CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3258 panF -202 -117 -256 -201 -202 - - CDS 1458 Transport and binding proteins sodium/pantothenate symporter b3259 prmA -21 144 107 32 -87 - - CDS 882 "Translation, post-translational modification" methylase for 50S ribosomal subunit protein L11 b3260 yhdG 1454 1123 1791 857 201 - - CDS 966 Putative enzymes putative dehydrogenase b3262 yhdJ -747 -491 -579 -642 -386 - - CDS 891 Putative enzymes putative methyltransferase b3263 yhdU -77 -106 -95 -139 -67 - - CDS 180 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3264 envR -352 -235 -281 -306 -129 - - CDS 663 "Cell processes (incl. adaptation, protection)" putative transcriptional regulator b3265 acrE -1213 -697 -793 -798 -473 - - CDS 1158 Cell structure transmembrane protein affects septum formation and cell membrane permeability b3266 acrF -901 -371 -448 -378 -371 - - CDS 3105 "Cell processes (incl. adaptation, protection)" integral transmembrane protein; acridine resistance b3267 yhdV 737 490 548 573 261 - - CDS 222 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3268 yhdW 383 172 147 243 100 - - CDS 918 Putative transport proteins putative periplasmic binding transport protein b3269 yhdX -493 -273 -303 -379 -271 - - CDS 1107 Putative transport proteins putative transport system permease protein b3270 yhdY -364 -227 -281 -323 -127 - - CDS 1107 Putative transport proteins putative transport system permease protein b3271 yhdZ -248 -122 -135 -177 -70 - - CDS 759 Putative transport proteins putative ATP-binding component of a transport system b3279 yrdA 960 573 412 313 -6 - - CDS 771 Putative enzymes putative transferase b3280 yrdB -460 89 68 36 -228 - - CDS 258 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3281 aroE 1504 1243 1256 1396 192 - - CDS 819 Amino acid biosynthesis and metabolism dehydroshikimate reductase b3282 yrdC 337 611 432 469 -94 - - CDS 573 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3283 yrdD 4356 3569 2742 2344 -196 - - CDS 510 "DNA replication, recombination, modification and repair" putative DNA topoisomerase b3286 smf_1 826 387 369 272 39 - - CDS 762 "Hypothetical, unclassified, unknown" "orf, fragment 1" b3289 sun 1047 1110 630 342 -166 - - CDS 1290 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3290 trkA -36 181 117 -66 -196 - - CDS 1377 Transport and binding proteins transport of potassium b3292 yhdM 133 192 66 -193 -189 - - CDS 426 Putative regulatory proteins putative transcriptional regulator b3293 yhdN 1306 730 603 411 -60 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3322 pinO 552 265 161 248 57 - - CDS 420 "DNA replication, recombination, modification and repair" calcium-binding protein required for initiation of chromosome replication b3323 yheD 193 169 155 199 72 - - CDS 1470 "Hypothetical, unclassified, unknown" putative export protein A for general secretion pathway (GSP) b3324 yheE -517 -341 -409 -387 -297 - - CDS 816 "Hypothetical, unclassified, unknown" putative general secretion pathway for protein export (GSP) b3325 yheF -301 -129 -194 -223 -175 - - CDS 1965 "Hypothetical, unclassified, unknown" putative general protein secretion protein b3326 yheG 165 166 80 96 8 - - CDS 1482 "Hypothetical, unclassified, unknown" putative general secretion pathway for protein export (GSP) (TYPE II TRAFFIC WARDEN ATPASE) b3327 hofF -149 -76 -167 -89 -170 - - CDS 1197 Transport and binding proteins putative general protein secretion protein b3328 hofG -194 -94 -170 -193 -106 - - CDS 438 Transport and binding proteins putative general protein secretion protein b3329 hofH -221 -18 -171 -141 -88 - - CDS 510 Transport and binding proteins putative general protein secretion protein b3330 yheH -238 -62 -199 -204 -194 - - CDS 417 "Hypothetical, unclassified, unknown" putative export protein for general secretion pathway (GSP) b3331 yheI -642 -415 -474 -447 -279 - - CDS 588 "Hypothetical, unclassified, unknown" putative export protein I for general secretion pathway (GSP) b3332 yheJ -483 -177 -309 -275 -265 - - CDS 984 "Hypothetical, unclassified, unknown" putative export protein J for general secretion pathway (GSP) b3333 yheK -580 -309 -338 -424 -272 - - CDS 1167 "Hypothetical, unclassified, unknown" putative general protein secretion protein b3334 pshM -420 -153 -225 -218 -143 - - CDS 486 Transport and binding proteins putative general secretion b3335 hofD 24 -86 -80 -107 -138 - - CDS 678 "Translation, post-translational modification" "leader peptidase, integral membrane protein" b3337 yheA 133 -22 53 47 -106 - - CDS 195 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3338 yheB -309 -241 -242 -325 -169 - - CDS 2694 Putative enzymes putative enzyme b3343 yheL 294 437 291 156 -105 - - CDS 288 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3344 yheM 392 614 318 300 14 - - CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3345 yheN 140 451 101 -66 -193 - - CDS 387 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3346 yheO 488 709 316 225 -44 - - CDS 735 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3347 fkpA 592 1298 1145 722 334 - - CDS 813 "Translation, post-translational modification" FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) b3348 slyX 857 777 877 558 269 - - CDS 219 "Hypothetical, unclassified, unknown" host factor for lysis of phiX174 infection b3352 yheS 136 100 -59 108 -200 - - CDS 1914 "Hypothetical, unclassified, unknown" putative ATP-binding component of a transport system b3353 yheT -594 -362 -437 -578 -350 - - CDS 1023 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3354 yheU 566 48 21 49 -185 - - CDS 219 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3355 prkB 259 204 -28 -122 -105 - - CDS 870 Central intermediary metabolism probable phosphoribulokinase b3358 yhfK 850 1305 920 800 341 - - CDS 2091 Structural proteins "orf, hypothetical protein" b3359 argD 510 258 153 100 -189 - - CDS 1221 Amino acid biosynthesis and metabolism acetylornithine delta-aminotransferase b3360 pabA -242 -29 -147 -209 -237 - - CDS 564 "Biosynthesis of cofactors, prosthetic groups and carriers" "p-aminobenzoate synthetase, component II" b3363 ppiA 1082 813 913 71 -244 - - CDS 573 "Translation, post-translational modification" peptidyl-prolyl cis-trans isomerase A (rotamase A) b3364 yhfC -201 7 -80 -61 -29 - - CDS 1182 Putative transport proteins putative transport b3365 nirB -219 -22 -104 -51 -87 - - CDS 2544 Energy metabolism nitrite reductase (NAD(P)H) subunit b3366 nirD -152 263 9 -182 -172 - - CDS 327 Energy metabolism nitrite reductase (NAD(P)H) subunit b3367 nirC -276 -114 -332 -239 -158 - - CDS 555 Energy metabolism nitrite reductase activity b3368 cysG 740 557 435 412 -11 - - CDS 1374 "Biosynthesis of cofactors, prosthetic groups and carriers" uroporphyrinogen III methylase; sirohaeme biosynthesis b3369 yhfL -345 -134 -190 -243 -123 - - CDS 168 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3370 yhfM -1054 -654 -691 -756 -353 - - CDS 1389 Putative transport proteins putative amino acid/amine transport protein b3371 yhfN -779 -546 -661 -627 -323 - - CDS 1044 Putative transport proteins putative transport protein b3372 yhfO 208 105 62 84 48 - - CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3373 yhfP 1035 635 631 435 160 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3374 yhfQ 986 366 473 541 -2 - - CDS 786 Putative enzymes putative kinase b3375 yhfR 609 113 65 -140 -163 - - CDS 798 Putative regulatory proteins putative transcriptional regulator b3376 yhfS 870 107 361 152 128 - - CDS 1086 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3377 yhfT -46 33 -94 -90 -57 - - CDS 1305 "Hypothetical, unclassified, unknown" putative transport system permease protein b3378 yhfU -67 -23 -106 -92 -150 - - CDS 393 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3379 yhfV -385 -270 -277 -514 -140 - - CDS 879 Putative enzymes putative hydrolase b3380 yhfW -73 0 -10 -46 -64 - - CDS 1227 Putative enzymes putative mutase b3381 yhfX -343 -15 -101 -47 22 - - CDS 1164 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3382 yhfY -140 -45 -80 -45 -248 - - CDS 405 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3383 yhfZ -680 -82 -267 -426 -169 - - CDS 687 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3384 trpS 242 450 493 374 80 - - CDS 1005 "Translation, post-translational modification" tryptophan tRNA synthetase b3385 gph 806 1132 747 1220 233 - - CDS 759 Carbon compound catabolism phosphoglycolate phosphatase b3386 rpe -205 3 -80 316 -100 - - CDS 678 Energy metabolism D-ribulose-5-phosphate 3-epimerase b3387 dam 718 212 238 482 39 - - CDS 837 "DNA replication, recombination, modification and repair" DNA adenine methylase b3388 damX 197 728 603 466 -179 - - CDS 1287 Central intermediary metabolism putative membrane protein; interferes with cell division b3389 aroB 573 676 515 539 -59 - - CDS 1089 Amino acid biosynthesis and metabolism 3-dehydroquinate synthase b3391 hofQ -357 -181 -155 -248 -206 - - CDS 1239 Transport and binding proteins putative transport portein b3392 yrfA 233 186 148 153 61 - - CDS 444 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3393 yrfB -167 -83 -179 -165 -35 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3394 yrfC -548 -279 -222 -343 -281 - - CDS 540 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3395 yrfD 267 140 176 169 -216 - - CDS 807 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3396 mrcA 1161 517 451 484 -57 - - CDS 2577 Cell structure peptidoglycan synthetase; penicillin-binding protein 1A b3397 yrfE 548 290 158 146 -156 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3398 yrfF -284 -83 -155 -216 -274 - - CDS 2136 Putative enzymes putative dehydrogenase b3399 yrfG 1512 634 701 230 -67 - - CDS 714 Putative enzymes putative phosphatase b3400 yrfH -394 -595 -350 -1289 -1352 - - CDS 402 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3401 yrfI 652 1022 944 414 1003 - - CDS 885 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3402 yhgE -148 -62 -191 -277 -255 - - CDS 1725 Putative transport proteins putative transport b3404 envZ 587 569 598 -187 -331 - - CDS 1353 Regulatory function "protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC" b3406 greB 269 54 -2 -103 -216 - - CDS 513 "Transcription, RNA processing and degradation" transcription elongation factor and transcript cleavage b3407 yhgF -30 139 -18 -49 -254 - - CDS 2223 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3408 feoA -206 -207 -250 -244 -152 - - CDS 228 Transport and binding proteins ferrous iron transport protein A b3409 feoB -589 -350 -315 -402 -92 - - CDS 2322 Transport and binding proteins ferrous iron transport protein B b3410 yhgG 454 -33 8 197 -71 - - CDS 237 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3411 yhgA 778 447 653 381 145 - - CDS 879 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3412 bioH 599 302 199 3 -160 - - CDS 771 "Biosynthesis of cofactors, prosthetic groups and carriers" biotin biosynthesis; reaction prior to pimeloyl CoA b3415 gntT -9 309 135 -10 -313 - - CDS 1314 Transport and binding proteins high-affinity transport of gluconate / gluconate permease b3419 yhgJ 260 364 289 386 125 - - CDS 606 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3420 rtcA 745 607 476 619 66 - - CDS 441 "Hypothetical, unclassified, unknown" RNA 3'-terminal phosphate cyclase b3421 rtcB -581 -93 -254 -410 -163 - - CDS 1227 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3422 rtcR -144 -163 -131 53 65 - - CDS 1599 Putative regulatory proteins putative 2-component regulator b3423 glpR 575 312 121 300 174 - - CDS 759 Energy metabolism repressor of the glp operon b3424 glpG 786 506 361 235 -140 - - CDS 831 Energy metabolism protein of glp regulon b3425 glpE -278 -161 -205 -199 -215 - - CDS 327 Energy metabolism protein of glp regulon b3426 glpD 589 291 228 245 22 - - CDS 1506 Energy metabolism sn-glycerol-3-phosphate dehydrogenase (aerobic) b3427 yzgL -219 -33 138 133 -140 - - CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3434 yhgN 171 167 132 134 -58 - - CDS 594 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3435 gntU_2 -135 27 -19 -105 -46 - - CDS 336 Transport and binding proteins "low-affinity gluconate transport permease protein, fragment 2" b3436 gntU_1 -529 -210 -92 -244 -198 - - CDS 999 Transport and binding proteins "low-affinity gluconate transport permease protein, interrupted" b3437 gntK -540 -390 -429 -407 -272 - - CDS 489 Central intermediary metabolism "gluconokinase 2, thermoresistant" b3438 gntR 1568 959 932 645 193 - - CDS 942 Central intermediary metabolism regulator of gluconate (gnt) operon b3439 yhhW 891 566 620 389 -203 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3441 yhhY -473 -322 -478 -580 -494 - - CDS 489 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3442 yhhZ -406 -180 -262 -244 -164 - - CDS 1179 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3443 yrhA -317 -203 -251 -260 -166 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3444 insA_6 -110 192 -30 -130 -117 - - CDS 276 IS1 protein InsA b3445 insB_6 435 257 349 418 242 - - CDS 504 IS1 protein InsB b3446 yrhB -527 -264 -360 -264 -283 - - CDS 285 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3447 ggt 569 230 409 223 -21 - - CDS 1743 "Biosynthesis of cofactors, prosthetic groups and carriers" gamma-glutamyltranspeptidase b3449 ugpQ 136 390 333 3088 2894 - - CDS 744 Central intermediary metabolism "glycerophosphodiester phosphodiesterase, cytosolic" b3450 ugpC 380 329 366 64 3 - - CDS 1110 Transport and binding proteins ATP-binding component of sn-glycerol 3-phosphate transport system b3451 ugpE -672 -337 -415 -557 -414 - - CDS 846 Transport and binding proteins "sn-glycerol 3-phosphate transport system, integral membrane protein" b3452 ugpA 782 550 608 612 42 - - CDS 888 Transport and binding proteins "sn-glycerol 3-phosphate transport system, integral membrane protein" b3453 ugpB 431 217 259 476 313 - - CDS 1317 Transport and binding proteins sn-glycerol 3-phosphate transport system; periplasmic binding protein b3454 livF 1148 816 1116 1126 566 - - CDS 726 Transport and binding proteins ATP-binding component of leucine transport b3455 livG -153 -42 36 27 64 - - CDS 768 Transport and binding proteins ATP-binding component of high-affinity branched-chain amino acid transport system b3456 livM -133 -86 26 -162 -183 - - CDS 1278 Transport and binding proteins high-affinity branched-chain amino acid transport b3457 livH 216 199 52 139 1 - - CDS 927 Transport and binding proteins high-affinity branched-chain amino acid transport system; membrane component b3458 livK -678 -276 -299 -316 -184 - - CDS 1110 Transport and binding proteins high-affinity leucine-specific transport system; periplasmic binding protein b3459 yhhK 1011 757 855 474 340 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3460 livJ 337 80 106 76 -69 - - CDS 1161 Transport and binding proteins high-affinity amino acid transport system; periplasmic binding protein b3462 ftsX -499 298 13 -540 -757 - - CDS 1059 "Cell processes (incl. adaptation, protection)" cell division membrane protein b3465 yhhF 1499 674 673 186 -68 - - CDS 597 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3466 yhhL 120 54 0 -69 -195 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3467 yhhM 226 301 110 -42 -34 - - CDS 360 Putative regulatory proteins putative receptor b3468 yhhN 531 316 -97 -350 -451 - - CDS 627 Putative enzymes putative enzyme b3470 yhhP -309 -253 -49 -232 -193 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3471 yhhQ -93 -101 -29 -93 -134 - - CDS 666 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3473 yhhS 262 160 228 -51 -127 - - CDS 1260 Putative transport proteins putative transport b3474 yhhT 1178 417 354 107 -73 - - CDS 1131 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3475 yhhU -179 -62 -112 -342 -309 - - CDS 588 Putative enzymes "orf, hypothetical protein" b3476 nikA 73 162 216 66 23 - - CDS 1575 Transport and binding proteins periplasmic binding protein for nickel b3477 nikB 274 338 332 71 -16 - - CDS 945 Transport and binding proteins "transport of nickel, membrane protein" b3478 nikC 412 268 264 296 41 - - CDS 834 Transport and binding proteins "transport of nickel, membrane protein" b3479 nikD 724 578 454 364 47 - - CDS 765 Transport and binding proteins ATP-binding protein of nickel transport system b3480 nikE -311 -228 -180 -301 -201 - - CDS 807 Transport and binding proteins ATP-binding protein of nickel transport system b3481 yhhG 1472 1244 907 1054 205 - - CDS 402 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3482 rhsB -394 -202 -240 -270 -149 - - CDS 4236 "Hypothetical, unclassified, unknown" rhsB protein in rhs element b3483 yhhH 403 70 244 317 -160 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3485 yhhJ -130 79 328 60 -37 - - CDS 1128 "Hypothetical, unclassified, unknown" putative transporter b3486 yhiH -447 -137 -187 -124 -113 - - CDS 2685 Putative transport proteins "putative ATP-binding component of a transport system, fragment 1" b3487 yhiI 543 526 490 96 -70 - - CDS 1068 Putative regulatory proteins putative membrane protein b3488 yhiJ -259 -173 -230 -184 -199 - - CDS 1623 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3489 yhiK -521 -365 -339 -380 -327 - - CDS 372 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3490 yhiL -363 -233 -286 -180 -131 - - CDS 1239 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3491 yhiM -191 -130 -121 -75 -112 - - CDS 1152 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3492 yhiN -476 -305 -381 -370 -345 - - CDS 1203 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3493 pitA 1040 1035 1102 730 233 - - CDS 1500 Transport and binding proteins low-affinity phosphate transport b3497 yhiQ 575 625 513 183 260 - - CDS 753 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3498 prlC 688 699 437 345 394 - - CDS 2043 "Translation, post-translational modification" oligopeptidase A b3499 yhiR 217 346 273 -93 -93 - - CDS 843 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3501 arsR 154 -26 16 -95 -66 - - CDS 354 "Cell processes (incl. adaptation, protection)" transcriptional repressor of chromosomal ars operon b3502 arsB 23 186 -88 -83 -88 - - CDS 1311 "Cell processes (incl. adaptation, protection)" arsenical pump membrane protein b3503 arsC 299 341 184 124 -99 - - CDS 426 "Cell processes (incl. adaptation, protection)" arsenate reductase b3504 yhiS -446 -218 -281 -252 -171 - - CDS 783 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3507 yhiF -144 -165 -169 -182 -152 - - CDS 531 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3508 yhiD 242 195 77 22 -19 - - CDS 648 Putative transport proteins putative transport ATPase b3512 yhiE 1134 182 124 -86 -194 - - CDS 528 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3513 yhiU 47 289 176 45 -110 - - CDS 1158 "Cell processes (incl. adaptation, protection)" putative membrane protein b3514 yhiV -103 -7 -23 2 -255 - - CDS 3114 "Cell processes (incl. adaptation, protection)" putative transport system permease protein b3515 yhiW 226 30 -231 -258 -276 - - CDS 729 Putative regulatory proteins putative ARAC-type regulatory protein b3517 gadA -340 -160 -205 -194 -169 - - CDS 1401 Central intermediary metabolism glutamate decarboxylase isozyme b3518 yhjA 120 88 185 105 -198 - - CDS 1398 Energy metabolism putative cytochrome C peroxidase (EC 1.11.1) b3519 treF 805 437 315 517 -55 - - CDS 1650 Carbon compound catabolism cytoplasmic trehalase b3520 yhjB -171 -55 -124 -113 -115 - - CDS 603 Putative regulatory proteins putative regulator b3521 yhjC -248 -136 -249 -184 -167 - - CDS 972 Putative regulatory proteins putative transcriptional regulator LYSR-type b3522 yhjD 780 460 73 0 8 - - CDS 1014 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3523 yhjE 505 292 257 368 170 - - CDS 1323 Putative transport proteins putative transport protein b3524 yhjG -26 134 -81 -231 -149 - - CDS 2076 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3525 yhjH 301 88 -1 235 -178 - - CDS 771 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3526 kdgK 259 115 98 26 -225 - - CDS 1149 Carbon compound catabolism ketodeoxygluconokinase b3528 dctA 1050 543 270 95 -153 - - CDS 1287 Transport and binding proteins uptake of C4-dicarboxylic acids b3529 yhjK 582 514 319 208 160 - - CDS 1956 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3530 yhjL 56 -208 -353 -464 -422 - - CDS 3501 Putative enzymes putative oxidoreductase subunit b3531 yhjM -360 -233 -298 -210 -223 - - CDS 1107 Putative enzymes putative endoglucanase b3532 yhjN -938 -571 -552 -582 -353 - - CDS 2340 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3533 yhjO -95 31 -94 -78 -114 - - CDS 2667 "Hypothetical, unclassified, unknown" putative cellulose synthase b3534 yhjQ -213 -27 13 -117 -144 - - CDS 729 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3535 yhjR 1029 578 519 113 -81 - - CDS 189 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3536 yhjS 835 890 437 87 -140 - - CDS 1572 "Translation, post-translational modification" putative protease b3537 yhjT 772 781 296 101 -229 - - CDS 189 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3538 yhjU -115 253 129 -283 -255 - - CDS 1680 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3539 yhjV -403 -155 -213 -323 -225 - - CDS 1272 Putative transport proteins putative transporter protein b3541 dppD 1739 1163 1873 743 -64 - - CDS 984 Transport and binding proteins putative ATP-binding component of dipeptide transport system b3542 dppC 277 844 931 116 -264 - - CDS 903 Transport and binding proteins dipeptide transport system permease protein 2 b3543 dppB 436 593 377 -86 -20 - - CDS 1020 Transport and binding proteins dipeptide transport system permease protein 1 b3546 yhjW -536 -271 -324 -372 -300 - - CDS 1725 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3547 yhjX -571 -436 -490 -598 -376 - - CDS 1209 "Cell processes (incl. adaptation, protection)" putative resistance protein b3548 yhjY -413 -510 -576 -677 -664 - - CDS 705 Fatty acid and phospholipid metabolism putative lipase b3549 tag 345 604 341 289 -3 - - CDS 564 "DNA replication, recombination, modification and repair" "3-methyl-adenine DNA glycosylase I, constitutive" b3550 yiaC 207 652 349 386 350 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3551 bisC 28 79 -40 78 -150 - - CDS 2220 "Biosynthesis of cofactors, prosthetic groups and carriers" biotin sulfoxide reductase b3552 yiaD -941 -471 -634 -640 -315 - - CDS 660 Cell structure putative outer membrane protein b3553 yiaE -276 211 -93 -81 -92 - - CDS 987 Putative enzymes putative dehydrogenase b3557 yi5A -231 -156 -103 -217 -125 - - CDS 522 "Hypothetical, unclassified, unknown" IS150 hypothetical protein b3558 t150 -407 -194 -289 -211 -178 - - CDS 852 "phage, transposon, or plasmid" IS150 putative transposase b3560 glyQ 947 841 741 318 -202 - - CDS 912 "Translation, post-translational modification" "glycine tRNA synthetase, alpha subunit" b3561 yiaH -825 -480 -544 -563 -358 - - CDS 996 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3562 yiaA -366 -160 -236 -215 -163 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3563 yiaB -458 -231 -316 -315 -204 - - CDS 354 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3564 xylB -1009 -365 -353 -894 -302 - - CDS 1455 Carbon compound catabolism xylulokinase b3565 xylA 444 29 -38 -232 -248 - - CDS 1323 Carbon compound catabolism D-xylose isomerase b3566 xylF 460 320 108 85 -152 - - CDS 993 Transport and binding proteins xylose binding protein transport system b3567 xylG -50 57 -27 -155 -192 - - CDS 1542 Transport and binding proteins putative ATP-binding protein of xylose transport system b3568 xylH -566 -404 -495 -410 -283 - - CDS 1182 Transport and binding proteins "putative xylose transport, membrane component" b3569 xylR -158 -123 -124 -243 -177 - - CDS 1179 Carbon compound catabolism putative regulator of xyl operon b3570 bax 204 227 276 -17 -123 - - CDS 825 "Hypothetical, unclassified, unknown" putative ATP-binding protein b3572 avtA -338 -223 -82 -353 -330 - - CDS 1254 Amino acid biosynthesis and metabolism "alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C" b3573 yiaI -568 -27 -281 -349 -187 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3574 yiaJ -253 -24 4 -185 -374 - - CDS 849 Putative regulatory proteins putative regulator b3575 yiaK -680 -572 -600 -411 -320 - - CDS 999 Putative enzymes putative dehydrogenase b3576 yiaL -429 -213 -275 -268 -199 - - CDS 468 Putative enzymes putative lipase b3577 yiaM -383 -223 -225 -304 -244 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3578 yiaN -444 -223 -257 -295 -202 - - CDS 1275 Cell structure putative membrane protein b3579 yiaO -417 -373 -338 -307 -182 - - CDS 987 Putative transport proteins putative solute-binding transport protein b3580 lyxK -269 -168 -177 -189 -122 - - CDS 1497 Carbon compound catabolism "L-xylulose kinase, cryptic" b3581 sgbH 235 366 258 236 111 - - CDS 663 "Hypothetical, unclassified, unknown" probable 3-hexulose 6-phosphate synthase b3582 sgbU -190 -80 -102 -123 -76 - - CDS 894 "Hypothetical, unclassified, unknown" probable 3-hexulose-6-phosphate isomerase b3583 sgbE -701 -435 -479 -508 -262 - - CDS 696 Energy metabolism putative epimerase/aldolase b3584 yiaT -461 -203 -274 -279 -199 - - CDS 741 Cell structure putative outer membrane protein b3585 yiaU 78 10 136 176 372 - - CDS 975 Putative regulatory proteins putative transcriptional regulator LYSR-type b3586 yiaV -378 -178 -207 -217 -259 - - CDS 1137 Putative transport proteins putative membrane protein b3587 yiaW -516 -302 -342 -312 -144 - - CDS 324 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3588 aldB 1589 934 594 886 521 - - CDS 1629 Carbon compound catabolism aldehyde dehydrogenase B (lactaldehyde dehydrogenase) b3589 yiaY 276 214 214 315 134 - - CDS 1149 Putative enzymes putative oxidoreductase b3590 selB -52 24 15 87 -171 - - CDS 1845 "Translation, post-translational modification" selenocysteinyl-tRNA-specific translation factor b3591 selA 699 543 306 343 -3 - - CDS 1392 "Translation, post-translational modification" selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase b3592 yibF 525 274 95 -40 -306 - - CDS 609 Putative enzymes putative S-transferase b3593 rhsA -313 -153 -215 -89 18 - - CDS 4134 "Hypothetical, unclassified, unknown" rhsA protein in rhs element b3594 yibA -408 -241 -250 -283 -220 - - CDS 843 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3595 yibJ -463 -261 -309 -290 -208 - - CDS 702 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3596 yibG -557 -318 -332 -342 -237 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3597 yibH 438 137 23 -58 -126 - - CDS 1137 Structural proteins putative membrane protein b3598 yibI 200 -86 -69 -137 -109 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3602 yibL 883 300 189 -297 -453 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3603 lldP -12 73 26 -74 -100 - - CDS 1656 Transport and binding proteins L-lactate permease b3604 lldR -128 -395 -367 -456 -309 - - CDS 777 Energy metabolism transcriptional regulator b3606 yibK -14 170 57 -51 45 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3613 yibP 602 453 479 237 40 - - CDS 1284 Cell structure putative membrane protein b3614 yibQ -325 15 -164 -130 -58 - - CDS 834 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3615 yibD -353 -99 -187 -282 -129 - - CDS 1035 Cell structure putative regulator b3618 htrL -467 -186 -252 -320 -173 - - CDS 873 "Hypothetical, unclassified, unknown" involved in lipopolysaccharide biosynthesis b3620 rfaF 375 647 359 518 -93 - - CDS 1047 Cell structure ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis b3621 rfaC 988 619 1002 1491 469 - - CDS 960 Cell structure heptosyl transferase I; lipopolysaccharide core biosynthesis b3622 rfaL -188 1 198 349 335 - - CDS 1260 Cell structure O-antigen ligase; lipopolysaccharide core biosynthesis b3623 rfaK -189 -49 -45 203 148 - - CDS 1074 Cell structure probably hexose transferase; lipopolysaccharide core biosynthesis b3624 rfaZ -311 -52 -183 -15 -127 - - CDS 852 Cell structure lipopolysaccharide core biosynthesis b3625 rfaY 57 543 129 684 34 - - CDS 699 Cell structure lipopolysaccharide core biosynthesis b3626 rfaJ -31 22 -118 230 -92 - - CDS 1017 Cell structure UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase b3627 rfaI 336 209 130 450 -92 - - CDS 1020 Cell structure "UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase" b3628 rfaB 270 234 78 444 -106 - - CDS 1110 Cell structure "UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6- D-galactosyltransferase" b3629 rfaS 353 101 19 127 -197 - - CDS 936 Cell structure lipopolysaccharide core biosynthesis b3630 rfaP 525 679 500 549 -112 - - CDS 798 Cell structure lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co b3631 rfaG 1172 1450 998 1032 -61 - - CDS 1125 Cell structure glucosyltransferase I; lipopolysaccharide core biosynthesis b3632 rfaQ 847 853 658 456 -66 - - CDS 1035 Cell structure lipopolysaccharide core biosynthesis b3633 kdtA 536 423 334 168 96 - - CDS 1278 Cell structure 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) b3634 kdtB 969 571 458 418 -28 - - CDS 480 Cell structure putative enzyme of lipopolysaccharide synthesis b3635 mutM 436 314 174 332 194 - - CDS 810 "DNA replication, recombination, modification and repair" formamidopyrimidine DNA glycosylase b3638 radC 1208 935 255 117 -285 - - CDS 675 "Cell processes (incl. adaptation, protection)" DNA repair protein b3639 dfp 595 816 703 4 -242 - - CDS 1293 "DNA replication, recombination, modification and repair" flavoprotein affecting synthesis of DNA and pantothenate metabolism b3640 dut 20 437 281 -100 -152 - - CDS 456 Nucleotide biosynthesis and metabolism deoxyuridinetriphosphatase b3641 ttk 318 643 576 161 -52 - - CDS 639 "Hypothetical, unclassified, unknown" putative transcriptional regulator b3643 rph -89 -377 215 -619 -632 - - CDS 687 "DNA replication, recombination, modification and repair" RNase PH b3645 dinD 1057 491 325 157 -91 - - CDS 837 "DNA replication, recombination, modification and repair" DNA-damage-inducible protein b3646 yicG 25 351 417 36 -184 - - CDS 672 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3647 yicF 261 271 190 86 16 - - CDS 1689 Putative enzymes putative enzyme b3651 spoU -36 244 209 -57 -165 - - CDS 690 "Transcription, RNA processing and degradation" putative RNA methylase b3652 recG -106 159 114 149 48 - - CDS 2082 "DNA replication, recombination, modification and repair" "DNA helicase, resolution of Holliday junctions, branch migration" b3653 gltS -212 -55 -179 -362 -255 - - CDS 1206 Transport and binding proteins glutamate transport b3654 yicE -1235 -735 -859 -829 -266 - - CDS 1392 Putative transport proteins putative transport protein b3655 yicH -244 15 -177 -87 -157 - - CDS 1710 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3656 yicI -106 -65 -75 -1 -101 - - CDS 2319 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3657 yicJ 626 396 383 542 305 - - CDS 1440 Putative transport proteins putative permease b3659 yicK -441 -235 -287 -287 -123 - - CDS 1185 "Hypothetical, unclassified, unknown" two-module transport protein b3660 yicL 63 86 5 30 -44 - - CDS 924 Putative transport proteins putative permease transporter b3661 nlpA -70 -67 -134 -169 -210 - - CDS 819 Membrane proteins lipoprotein-28 b3662 yicM -161 54 -48 -128 -21 - - CDS 1356 Putative regulatory proteins putative transport protein b3663 yicN -580 -227 -314 -489 -434 - - CDS 480 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3664 yicO -342 -144 -278 -311 -98 - - CDS 1413 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3665 yicP -471 -312 -391 -367 -334 - - CDS 1767 "Hypothetical, unclassified, unknown" probable adenine deaminase (synthesis xanthine) b3666 uhpT 0 -120 -147 -144 -54 - - CDS 1392 Transport and binding proteins hexose phosphate transport protein b3667 uhpC 43 2 -53 -161 -376 - - CDS 1323 Transport and binding proteins regulator of uhpT b3668 uhpB -1061 -661 -749 -906 -725 - - CDS 1506 Transport and binding proteins sensor histidine protein kinase phosphorylates UhpA b3669 uhpA -26 -15 46 -40 -110 - - CDS 591 Transport and binding proteins "response regulator, positive activator of uhpT transcription (sensor, uhpB)" b3670 ilvN 41 -36 -62 -71 -158 - - CDS 291 Amino acid biosynthesis and metabolism "acetolactate synthase I, valine sensitive, small subunit" b3671 ilvB -351 -294 -404 -335 -306 - - CDS 1689 Amino acid biosynthesis and metabolism "acetolactate synthase I,valine-sensitive, large subunit" b3673 emrD 1274 841 1026 642 605 - - CDS 1191 "Cell processes (incl. adaptation, protection)" 2-module integral membrane pump; multidrug resistance b3674 yidF 705 82 -72 -189 -442 - - CDS 498 Putative regulatory proteins putative transcriptional regulator b3675 yidG -230 -106 -137 -241 -194 - - CDS 363 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3676 yidH 284 278 233 -186 -165 - - CDS 348 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3677 yidI 113 97 -112 -40 -90 - - CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3678 yidJ -13 -756 15 29 27 - - CDS 1494 Putative enzymes putative sulfatase b3679 yidK -483 -276 -238 -321 -159 - - CDS 1716 Putative transport proteins putative cotransporter b3680 yidL -595 -344 -424 -469 -370 - - CDS 924 Putative regulatory proteins putative ARAC-type regulatory protein b3681 glvG -18 65 -20 -111 -74 - - CDS 639 Transport and binding proteins probable 6-phospho-beta-glucosidase b3682 glvB -308 -116 -214 -121 -178 - - CDS 486 Transport and binding proteins "PTS system, arbutin-like IIB component" b3683 glvC -228 -130 -180 -196 -190 - - CDS 1368 Transport and binding proteins "PTS system, arbutin-like IIC component" b3684 yidP -601 -341 -461 -431 -209 - - CDS 717 Putative regulatory proteins putative transcriptional regulator b3686 ibpB -183 -3 47 -21 -79 - - CDS 435 "Cell processes (incl. adaptation, protection)" heat shock protein b3687 ibpA -176 66 136 -125 -162 - - CDS 414 "Cell processes (incl. adaptation, protection)" heat shock protein b3689 yidR -256 -109 -197 -131 -111 - - CDS 1251 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3690 yidS -234 -129 -152 -100 -131 - - CDS 1086 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3691 dgoT -415 -263 -336 -333 -265 - - CDS 1338 Putative transport proteins D-galactonate transport b3692 dgoA -745 -497 -489 -426 -311 - - CDS 1764 Putative regulatory proteins 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase b3693 dgoK -356 -191 -224 -292 -104 - - CDS 879 "Hypothetical, unclassified, unknown" 2-oxo-3-deoxygalactonate kinase b3694 - 461 293 404 338 216 - - CDS 297 Putative regulatory proteins putative FADA-type transcriptional regulator b3695 yidW -20 -213 -260 -30 -153 - - CDS 387 "Hypothetical, unclassified, unknown" regulator protein for dgo operon b3696 yidX -476 -242 -260 -296 -217 - - CDS 672 Putative enzymes putative replicase EC 2.7.- b3697 yidA 241 565 442 656 123 - - CDS 813 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3698 yidB -128 -85 -72 -21 -344 - - CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3699 gyrB 1323 1141 790 1205 334 - - CDS 2415 "DNA replication, recombination, modification and repair" "DNA gyrase subunit B, type II topoisomerase, ATPase activity" b3700 recF 510 425 330 440 278 - - CDS 1074 "DNA replication, recombination, modification and repair" "ssDNA and dsDNA binding, ATP binding" b3705 yidC -478 28 -157 -365 -215 - - CDS 1647 "Hypothetical, unclassified, unknown" 60 KD inner-membrane protein b3707 tnaL -12636 -2671 4575 4346 18217 - - CDS 75 Amino acid biosynthesis and metabolism tryptophanase leader peptide b3708 tnaA -14703 -8226 -17992 -23608 -8562 - - CDS 1431 Amino acid biosynthesis and metabolism tryptophanase b3710 yidY -634 -293 -350 -490 -329 - - CDS 1176 Putative regulatory proteins putative transport protein b3711 yidZ -631 -305 -376 -397 -201 - - CDS 960 Putative regulatory proteins putative transcriptional regulator LYSR-type b3713 yieF 1445 1081 1285 721 295 - - CDS 567 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3714 yieG -685 -343 -377 -439 -325 - - CDS 1338 Putative transport proteins putative membrane / transport protein b3715 yieH 130 167 45 -79 -28 - - CDS 666 Putative enzymes putative phosphatase b3716 yieI -352 -130 -231 -194 -183 - - CDS 468 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3717 yieJ 983 469 547 437 231 - - CDS 588 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3718 yieK 729 423 428 382 83 - - CDS 642 Putative enzymes putative isomerase b3719 yieL -960 -448 -549 -631 -331 - - CDS 1203 Putative enzymes putative xylanase b3720 yieC -277 -99 -206 -167 -126 - - CDS 1617 "Hypothetical, unclassified, unknown" putative receptor protein b3721 bglB -477 -223 -308 -301 -170 - - CDS 1413 Carbon compound catabolism phospho-beta-glucosidase B; cryptic b3722 bglF -303 -157 -277 -272 -146 - - CDS 1878 Transport and binding proteins "PTS system beta-glucosides, enzyme II, cryptic" b3723 bglG -699 -429 -479 -550 -243 - - CDS 837 Carbon compound catabolism positive regulation of bgl operon b3724 phoU -124 20 -98 -159 -182 - - CDS 726 Regulatory function negative regulator for pho regulon and putative enzyme in phosphate metabolism b3725 pstB 1192 986 1013 577 212 - - CDS 774 Transport and binding proteins ATP-binding component of high-affinity phosphate-specific transport system b3726 pstA -455 -206 -274 -380 -336 - - CDS 891 Transport and binding proteins high-affinity phosphate-specific transport system b3727 pstC -140 -6 -12 -100 -101 - - CDS 960 Transport and binding proteins "high-affinity phosphate-specific transport system, cytoplasmic membrane component" b3728 pstS -407 -252 -284 -288 -179 - - CDS 1041 Transport and binding proteins high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein b3729 glmS -525 -59 -53 -313 -144 - - CDS 1830 Central intermediary metabolism L-glutamine:D-fructose-6-phosphate aminotransferase b3730 glmU 1236 1141 1629 999 132 - - CDS 1371 Central intermediary metabolism N-acetyl glucosamine-1-phosphate uridyltransferase b3731 atpC -653 -227 -70 -307 65 - - CDS 420 Energy metabolism "membrane-bound ATP synthase, F1 sector, epsilon-subunit" b3732 atpD -272 38 59 165 317 - - CDS 1383 Energy metabolism "membrane-bound ATP synthase, F1 sector, beta-subunit" b3733 atpG 1342 1297 1337 2329 891 - - CDS 864 Energy metabolism "membrane-bound ATP synthase, F1 sector, gamma-subunit" b3734 atpA 686 1269 770 1782 509 - - CDS 1542 Energy metabolism "membrane-bound ATP synthase, F1 sector, alpha-subunit" b3740 gidB -420 -190 -271 -250 -230 - - CDS 624 "DNA replication, recombination, modification and repair" glucose-inhibited division; chromosome replication? b3741 gidA -14 282 108 -38 -94 - - CDS 1890 "DNA replication, recombination, modification and repair" glucose-inhibited division; chromosome replication? b3743 asnC -431 -235 -367 -394 -258 - - CDS 459 Amino acid biosynthesis and metabolism "regulator for asnA, asnC and gidA" b3744 asnA 860 398 361 409 122 - - CDS 993 Amino acid biosynthesis and metabolism asparagine synthetase A b3745 yieM 1526 765 429 458 24 - - CDS 1284 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3746 yieN 92 159 -133 -73 -95 - - CDS 1521 "Hypothetical, unclassified, unknown" putative 2-component regulator b3747 kup -583 -380 -428 -451 -396 - - CDS 1560 Transport and binding proteins low affinity potassium transport system b3749 rbsA 951 361 -12 -72 -205 - - CDS 1506 Transport and binding proteins ATP-binding component of D-ribose high-affinity transport system b3753 rbsR 105 161 78 -21 -122 - - CDS 993 Carbon compound catabolism regulator for rbs operon b3754 yieO -92 -48 -119 -173 -201 - - CDS 1428 Putative transport proteins putative transport protein b3755 yieP 1023 823 439 124 -275 - - CDS 546 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3762 yifA 863 632 502 194 -123 - - CDS 597 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3763 pssR 692 357 185 -92 -140 - - CDS 402 Fatty acid and phospholipid metabolism regulator of pssA b3765 yifB -391 -6 -177 -178 -54 - - CDS 1551 "Translation, post-translational modification" putative 2-component regulator b3766 ilvL 949 651 659 230 148 - - CDS 99 Amino acid biosynthesis and metabolism ilvGEDA operon leader peptide b3767 ilvG_1 -297 -121 -234 -244 -393 - - CDS 984 Amino acid biosynthesis and metabolism "acetolactate synthase II, large subunit, cryptic, interrupted" b3769 ilvM -225 6 -162 -127 -9 - - CDS 264 Amino acid biosynthesis and metabolism "acetolactate synthase II, valine insensitive, small subunit" b3771 ilvD 84 256 303 192 -162 - - CDS 1818 Amino acid biosynthesis and metabolism dihydroxyacid dehydratase b3772 ilvA -624 -331 -475 -636 -534 - - CDS 1545 Amino acid biosynthesis and metabolism threonine deaminase (dehydratase) b3773 ilvY -565 -374 -420 -466 -488 - - CDS 894 Amino acid biosynthesis and metabolism positive regulator for ilvC b3774 ilvC -266 -132 -123 -69 -120 - - CDS 1476 Amino acid biosynthesis and metabolism ketol-acid reductoisomerase b3775 ppiC 1765 1658 1898 2151 1046 - - CDS 282 "Translation, post-translational modification" peptidyl-prolyl cis-trans isomerase C (rotamase C) b3776 - -318 -190 -245 -210 -164 - - CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3777 yifN -375 -133 -241 -267 -218 - - CDS 261 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3778 rep 33 119 89 51 -134 - - CDS 2022 "DNA replication, recombination, modification and repair" "rep helicase, a single-stranded DNA dependent ATPase" b3779 gppA 724 726 475 642 298 - - CDS 1485 Regulatory function guanosine pentaphosphatase; exopolyphosphatase b3784 rfe 169 332 245 -87 -126 - - CDS 1104 Cell structure UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; synthesis of enterobacterial common antigen (ECA) b3786 wecB 186 473 627 7 -147 - - CDS 1170 Central intermediary metabolism UDP-N-acetyl glucosamine -2-epimerase; synthesis of enterobacterial common antigen (ECA) b3787 wecC 1556 983 1085 891 114 - - CDS 1263 Central intermediary metabolism UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA) b3788 rffG 465 348 483 497 -88 - - CDS 1068 Central intermediary metabolism "dTDP-glucose 4,6-dehydratase" b3789 rffH 655 309 331 511 60 - - CDS 882 Central intermediary metabolism glucose-1-phosphate thymidylyltransferase b3790 wecD 594 413 359 510 -25 - - CDS 546 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3791 wecE 259 316 278 347 -2 - - CDS 1131 Putative regulatory proteins putative regulator b3792 wzxE 1304 759 590 1029 68 - - CDS 1251 Putative enzymes putative cytochrome b3793 wecF 1132 672 782 600 63 - - CDS 1353 Cell structure TDP-Fuc4NAc:lipidII transferase; synthesis of enterobacterial common antigen (ECA) b3794 wecG 196 186 178 84 -50 - - CDS 741 Cell structure probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA) b3800 aslB 270 355 364 147 11 - - CDS 1236 Central intermediary metabolism putative arylsulfatase regulator b3801 aslA 504 162 286 303 88 - - CDS 1656 Central intermediary metabolism arylsulfatase b3806 cyaA -89 308 -16 -103 -70 - - CDS 2547 Regulatory function adenylate cyclase b3807 cyaY 1352 1179 1159 880 335 - - CDS 321 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3808 - -942 -537 -660 -683 -378 - - CDS 486 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3810 yigA -63 512 101 -35 -234 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3812 yigB -716 -180 74 -168 -234 - - CDS 717 Putative enzymes putative phosphatase b3813 uvrD -229 125 270 4 -136 - - CDS 2163 "DNA replication, recombination, modification and repair" DNA-dependent ATPase I and helicase II b3814 - -641 -336 -384 -409 -268 - - CDS 300 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3815 yigE -477 -170 -210 -92 20 - - CDS 486 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3816 corA -352 -33 -67 -164 -388 - - CDS 951 Transport and binding proteins "Mg2+ transport, system I" b3817 yigF -447 -276 -333 -324 -199 - - CDS 381 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3818 yigG -504 -278 -343 -291 -208 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3819 rarD -244 -86 -151 -119 -146 - - CDS 903 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3820 yigI 218 82 9 152 46 - - CDS 486 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3821 pldA 382 182 216 44 -81 - - CDS 870 Central intermediary metabolism outer membrane phospholipase A b3822 recQ -169 -20 -79 -108 -197 - - CDS 1833 "DNA replication, recombination, modification and repair" ATP-dependent DNA helicase b3823 yigJ -172 -44 -159 -247 -231 - - CDS 369 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3824 yigK -226 -211 -236 -200 -222 - - CDS 417 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3825 pldB 636 560 539 224 -247 - - CDS 1023 Central intermediary metabolism lysophospholipase L(2) b3826 yigL 984 819 805 527 -47 - - CDS 516 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3827 yigM -51 -42 -72 -46 -121 - - CDS 900 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3828 metR -654 -331 -662 -417 -458 - - CDS 954 Amino acid biosynthesis and metabolism regulator for metE and metH b3829 metE -334 -263 -322 -366 -230 - - CDS 2262 Amino acid biosynthesis and metabolism tetrahydropteroyltriglutamate methyltransferase b3830 ysgA -78 86 -7 -116 -84 - - CDS 999 Putative enzymes putative enzyme b3832 yigN 1726 933 553 412 28 - - CDS 1428 Structural proteins putative alpha helix chain b3840 yigW_1 1020 613 664 645 136 - - CDS 621 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3841 yigW_2 -194 -45 -164 -81 -135 - - CDS 342 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3842 rfaH -236 -204 -179 -259 -201 - - CDS 489 Cell structure "transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin" b3844 ubiB 2460 3481 2717 1534 -78 - - CDS 702 Energy metabolism ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase) b3845 fadA -56 12 -100 -193 -78 - - CDS 1164 Fatty acid and phospholipid metabolism thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase b3846 fadB -815 -374 -489 -639 -361 - - CDS 2190 Fatty acid and phospholipid metabolism 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase b3847 pepQ 391 1064 761 624 -128 - - CDS 1332 "Translation, post-translational modification" proline dipeptidase b3848 yigZ 386 547 679 835 397 - - CDS 618 Putative enzymes "orf, hypothetical protein" b3849 trkH -393 -114 -24 -212 -168 - - CDS 1299 Transport and binding proteins "potassium uptake, requires TrkE" b3850 hemG -329 30 131 4 -283 - - CDS 546 "Hypothetical, unclassified, unknown" protoporphyrin oxidase b3856 mobB -200 -139 -107 -152 -76 - - CDS 513 "Hypothetical, unclassified, unknown" molybdopterin-guanine dinucleotide biosynthesis protein B b3857 mobA -110 64 66 -18 -14 - - CDS 585 "Biosynthesis of cofactors, prosthetic groups and carriers" "molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar" b3859 yihE 862 950 602 692 -11 - - CDS 987 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3861 yihF -112 -9 -144 -118 -100 - - CDS 1473 "Hypothetical, unclassified, unknown" putative GTP-binding protein b3862 yihG -385 -195 -214 -246 -182 - - CDS 933 Putative enzymes putative endonuclease b3864 spf 32 124 219 -92 235 - - misc_RNA 109 "untranslated Spot 42 RNA, associates with nucleoid and ribosomes, unknown function" b3866 yihI 1684 538 590 82 -451 - - CDS 510 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3867 hemN 273 301 155 84 -108 - - CDS 1380 "Biosynthesis of cofactors, prosthetic groups and carriers" O2-independent coproporphyrinogen III oxidase b3868 glnG 200 -10 47 263 239 - - CDS 1410 Amino acid biosynthesis and metabolism "response regulator for gln (sensor glnL) (nitrogen regulator I, NRI)" b3869 glnL 224 213 81 -53 -53 - - CDS 1050 Amino acid biosynthesis and metabolism "histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII)" b3870 glnA 772 620 435 290 181 - - CDS 1410 Amino acid biosynthesis and metabolism glutamine synthetase b3871 yihK -36 535 163 -63 -35 - - CDS 1776 "Translation, post-translational modification" putative GTP-binding factor b3872 yihL 47 82 -59 -150 -159 - - CDS 711 "Hypothetical, unclassified, unknown" putative transcriptional regulator b3873 yihM -324 -117 -249 -242 -158 - - CDS 981 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3874 yihN -866 -440 -460 -584 -158 - - CDS 1266 Putative transport proteins putative resistance protein (transport) b3875 yshA -494 -257 -315 -301 -111 - - CDS 693 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3876 yihO -350 -159 -209 -260 -159 - - CDS 1464 Putative transport proteins putative permease b3877 yihP -471 -260 -211 -290 -161 - - CDS 1407 Putative transport proteins putative permease b3878 yihQ 60 1 -3 -99 -222 - - CDS 2037 Putative enzymes putative glycosidase b3879 yihR -816 -378 -433 -503 -329 - - CDS 927 Putative enzymes putative aldose-1-epimerase (EC 5.1.3.3) b3880 yihS -54 -145 -117 -28 -140 - - CDS 1257 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3881 yihT 61 139 44 -14 -89 - - CDS 879 Putative enzymes putative aldolase b3882 yihU -544 -328 -349 -392 -240 - - CDS 897 Putative enzymes putative dehydrogenase b3883 yihV 181 192 241 20 253 - - CDS 903 Putative enzymes putative kinase b3884 yihW 702 263 365 33 -173 - - CDS 810 Putative regulatory proteins putative DEOR-type transcriptional regulator b3886 rbn 282 534 127 41 -192 - - CDS 873 "Hypothetical, unclassified, unknown" tRNA processing exoribonuclease BN b3887 yihZ 565 922 530 637 -82 - - CDS 438 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3888 yiiD 280 625 629 537 167 - - CDS 990 Putative enzymes putative acetyltransferase (EC 2.3.1.18) b3889 yiiE -509 -258 -291 -251 -149 - - CDS 246 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3890 yiiF -398 -183 -241 -114 -116 - - CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3891 fdhE 286 526 1038 1015 314 - - CDS 930 Energy metabolism affects formate dehydrogenase-N b3895 fdhD -349 -49 -120 -253 -254 - - CDS 834 Energy metabolism affects formate dehydrogenase-N b3896 yiiG -430 -216 -287 -312 -236 - - CDS 1056 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3897 frvR -475 -279 -240 -305 -253 - - CDS 1749 Transport and binding proteins putative frv operon regulatory protein b3898 frvX -31 -73 -83 -144 -92 - - CDS 1071 "Hypothetical, unclassified, unknown" frv operon protein b3899 frvB 579 322 152 321 6 - - CDS 1458 Transport and binding proteins "PTS system, fructose-like enzyme IIBC component" b3900 frvA -254 -159 -287 -321 -181 - - CDS 447 Transport and binding proteins "PTS system, fructose-specific IIA component" b3901 yiiL -540 -320 -346 -364 -199 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3902 rhaD 463 289 307 103 -104 - - CDS 825 Carbon compound catabolism rhamnulose-phosphate aldolase b3903 rhaA 907 454 464 137 91 - - CDS 1260 Carbon compound catabolism L-rhamnose isomerase b3904 rhaB 168 -7 14 -26 -92 - - CDS 1470 Carbon compound catabolism rhamnulokinase b3905 rhaS 441 86 161 191 -14 - - CDS 837 Carbon compound catabolism positive regulator for rhaBAD operon b3906 rhaR 291 172 115 41 -19 - - CDS 939 Carbon compound catabolism positive regulator for rhaRS operon b3907 rhaT -725 -435 -480 -526 -308 - - CDS 1035 Transport and binding proteins rhamnose transport b3909 kdgT 646 313 340 478 168 - - CDS 993 Transport and binding proteins 2-keto-3-deoxy-D-gluconate transport system b3910 yiiM 907 452 366 169 -74 - - CDS 705 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3911 cpxA 342 227 53 -93 -229 - - CDS 1374 Regulatory function "probable sensor protein (histidine protein kinase), acting on arcA" b3917 sbp 533 236 283 230 -95 - - CDS 990 Transport and binding proteins periplasmic sulfate-binding protein b3918 cdh 166 124 127 8 -32 - - CDS 756 Fatty acid and phospholipid metabolism CDP-diacylglycerol phosphotidylhydrolase b3920 yiiQ 397 163 64 39 -259 - - CDS 600 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3921 yiiR -143 -43 -104 -273 -199 - - CDS 441 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3922 yiiS 380 627 651 316 7 - - CDS 300 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3923 yiiT -204 93 -8 190 9 - - CDS 429 Putative regulatory proteins putative regulator b3924 fpr 542 418 362 324 259 - - CDS 747 Energy metabolism ferredoxin-NADP reductase b3925 glpX 0 160 191 166 282 - - CDS 1011 "Hypothetical, unclassified, unknown" unknown function in glycerol metabolism b3926 glpK -548 -258 -229 -380 -360 - - CDS 1509 Central intermediary metabolism glycerol kinase b3927 glpF -135 93 311 197 -195 - - CDS 846 Transport and binding proteins facilitated diffusion of glycerol b3929 menG 1434 1226 2059 1397 533 - - CDS 486 "Biosynthesis of cofactors, prosthetic groups and carriers" "menaquinone biosynthesis, unknown" b3930 menA -325 -102 -20 -133 -105 - - CDS 927 "Biosynthesis of cofactors, prosthetic groups and carriers" "1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone" b3931 hslU 191 525 430 752 275 - - CDS 1332 "Cell processes (incl. adaptation, protection)" "heat shock protein hslVU, ATPase subunit, homologous to chaperones" b3933 ftsN 1309 865 731 362 60 - - CDS 960 "Cell processes (incl. adaptation, protection)" essential cell division protein b3934 cytR 1239 782 402 372 -94 - - CDS 1026 Regulatory function "regulator for deo operon, udp, cdd, tsx, nupC, and nupG" b3935 priA -213 -95 -195 -161 -211 - - CDS 2199 "DNA replication, recombination, modification and repair" primosomal protein N'(= factor Y)(putative helicase) b3937 yiiX 316 421 376 363 0 - - CDS 609 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3939 metB 447 181 178 39 -73 - - CDS 1161 Amino acid biosynthesis and metabolism cystathionine gamma-synthase b3941 metF -174 -165 -231 -133 -201 - - CDS 891 Central intermediary metabolism "5,10-methylenetetrahydrofolate reductase" b3943 yijE -266 -175 -143 -309 -198 - - CDS 939 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3944 yijF -474 -368 -521 -429 -397 - - CDS 618 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3945 gldA 787 896 972 681 247 - - CDS 1143 Central intermediary metabolism "glycerol dehydrogenase, (NAD)" b3946 talC 309 346 283 29 -108 - - CDS 663 Energy metabolism putative transaldolase b3947 ptsA 527 171 158 207 -12 - - CDS 2136 Transport and binding proteins PEP-protein phosphotransferase system enzyme I b3948 yijI -972 -477 -545 -625 -386 - - CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3949 frwC 693 646 569 446 258 - - CDS 1080 Carbon compound catabolism "PTS system, fructose-like enzyme II component" b3950 frwB 357 -44 121 105 -60 - - CDS 321 Carbon compound catabolism PTS system fructose-like IIB component 1 b3951 pflD -460 -236 -189 -324 -198 - - CDS 2298 Energy metabolism formate acetyltransferase 2 b3952 pflC 1176 541 868 857 238 - - CDS 879 Energy metabolism probable pyruvate formate lyase activating enzyme 2 b3953 frwD -546 -220 -273 -253 -176 - - CDS 342 Carbon compound catabolism PTS system fructose-like IIB component 2 b3954 yijO 898 869 899 634 461 - - CDS 852 Putative regulatory proteins putative ARAC-type regulatory protein b3955 yijP 268 300 374 95 182 - - CDS 1734 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3957 argE 626 781 449 179 -70 - - CDS 1152 Amino acid biosynthesis and metabolism acetylornithine deacetylase b3958 argC 336 89 138 278 -80 - - CDS 1005 Amino acid biosynthesis and metabolism N-acetyl-gamma-glutamylphosphate reductase b3959 argB -339 -146 -235 -256 -382 - - CDS 777 Amino acid biosynthesis and metabolism acetylglutamate kinase b3960 argH 58 255 170 90 -60 - - CDS 1374 Amino acid biosynthesis and metabolism argininosuccinate lyase b3961 oxyR -111 65 258 -8 115 - - CDS 918 Regulatory function "activator, hydrogen peroxide-inducible genes" b3962 udhA -371 -214 -135 -220 -159 - - CDS 1335 Putative enzymes putative oxidoreductase b3964 yijD 591 617 933 615 67 - - CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3965 trmA -326 -184 -146 -255 -281 - - CDS 1101 "Translation, post-translational modification" tRNA (uracil-5-)-methyltransferase b3966 btuB -454 -160 -163 -230 -167 - - CDS 1845 Transport and binding proteins "outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23" b3967 murI 364 598 246 184 -119 - - CDS 870 Cell structure "glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan" b3972 murB 85 467 153 126 -1 - - CDS 1029 Cell structure UDP-N-acetylenolpyruvoylglucosamine reductase b3973 birA -485 127 -238 -279 -286 - - CDS 966 "Biosynthesis of cofactors, prosthetic groups and carriers" biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor b3974 coaA 65 228 69 -12 -124 - - CDS 951 "Biosynthesis of cofactors, prosthetic groups and carriers" pantothenate kinase b3975 - -84 11 33 150 -156 - - CDS 156 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3988 rpoC 109 246 -75 -70 281 - - CDS 4224 "Transcription, RNA processing and degradation" "RNA polymerase, beta prime subunit" b3989 htrC -365 -168 -171 -267 -157 - - CDS 540 "Cell processes (incl. adaptation, protection)" heat shock protein htrC b3990 thiH -753 -307 -307 -389 -239 - - CDS 1134 "Biosynthesis of cofactors, prosthetic groups and carriers" "thiamin biosynthesis, thiazole moiety" b3991 thiG 366 562 375 242 670 - - CDS 846 "Biosynthesis of cofactors, prosthetic groups and carriers" "thiamin biosynthesis, thiazole moiety" b3992 thiF -855 -542 -461 -509 -181 - - CDS 738 "Biosynthesis of cofactors, prosthetic groups and carriers" "thiamin biosynthesis, thiazole moiety" b3993 thiE 551 208 267 203 -330 - - CDS 636 "Biosynthesis of cofactors, prosthetic groups and carriers" "thiamin biosynthesis, thiazole moiety" b3994 thiC -696 -426 -503 -513 -278 - - CDS 1896 "Biosynthesis of cofactors, prosthetic groups and carriers" "thiamin biosynthesis, pyrimidine moiety" b3995 yjaE 405 141 77 -271 -277 - - CDS 477 Putative regulatory proteins putative transcriptional regulator b3996 yjaD 908 322 397 147 -69 - - CDS 774 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3998 nfi -420 -9 -43 -687 -380 - - CDS 678 "Hypothetical, unclassified, unknown" endonuclease V (deoxyinosine 3'endoduclease) b4001 yjaH 81 281 174 -31 -53 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4002 yjaI -166 -85 -61 134 87 - - CDS 567 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4003 hydH 75 356 260 -56 94 - - CDS 1398 Energy metabolism "sensor kinase for HydG, hydrogenase 3 activity" b4004 hydG -77 218 178 122 133 - - CDS 1326 Energy metabolism response regulator of hydrogenase 3 activity (sensor HydH) b4005 purD -41 -31 -161 -114 -184 - - CDS 1290 Nucleotide biosynthesis and metabolism phosphoribosylglycinamide synthetase = GAR synthetase b4006 purH 1036 717 979 901 250 - - CDS 1590 Nucleotide biosynthesis and metabolism phosphoribosylaminoimidazolecarboxamideformyltransferase = AICAR formyltransferase; IMP cyclohydrolase b4011 yjaA -456 -246 -240 -264 -194 - - CDS 384 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4012 yjaB -484 -144 -206 -174 -102 - - CDS 444 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4013 metA -410 -213 -240 -280 -148 - - CDS 930 Amino acid biosynthesis and metabolism homoserine transsuccinylase b4014 aceB 105 309 143 381 -152 - - CDS 1602 Central intermediary metabolism malate synthase A b4015 aceA 844 982 917 574 417 - - CDS 1305 Central intermediary metabolism isocitrate lyase b4016 aceK -108 19 -75 7 42 - - CDS 1737 Central intermediary metabolism isocitrate dehydrogenase kinase/phosphatase b4017 arp -573 -353 -371 -411 -282 - - CDS 2187 Fatty acid and phospholipid metabolism regulator of acetyl CoA synthetase b4018 iclR -430 -236 -200 -318 -212 - - CDS 864 Central intermediary metabolism repressor of aceBA operon b4020 yjbB 288 242 46 24 -72 - - CDS 1632 Structural proteins putative alpha helix protein b4021 pepE 939 500 581 311 50 - - CDS 690 "Translation, post-translational modification" "peptidase E, a dipeptidase where amino-terminal residue is aspartate" b4022 yjbC 418 18 97 -145 -176 - - CDS 873 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4024 lysC 188 15 -23 9 -152 - - CDS 1350 Amino acid biosynthesis and metabolism "aspartokinase III, lysine sensitive" b4026 yjbE -1794 -999 -930 -1333 -934 - - CDS 243 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4027 yjbF 201 5 -37 29 -163 - - CDS 669 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4028 yjbG -66 54 -70 -66 -41 - - CDS 738 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4029 yjbH -465 -296 -233 -264 -225 - - CDS 2097 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4030 yjbA -116 -38 -157 -183 -106 - - CDS 411 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4031 xylE 91 208 112 88 -87 - - CDS 1476 Transport and binding proteins xylose-proton symport b4034 malE -11495 -8121 8315 11424 22058 - - CDS 1191 Transport and binding proteins periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis b4036 lamB -1528 -8019 7263 10589 20412 - - CDS 1341 Transport and binding proteins phage lambda receptor protein; maltose high-affinity receptor b4038 yjbI -289 -136 -173 -148 -138 - - CDS 1329 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4040 ubiA 1452 787 588 53 -121 - - CDS 873 "Biosynthesis of cofactors, prosthetic groups and carriers" 4-hydroxybenzoate-octaprenyltransferase b4041 plsB 407 970 422 158 -42 - - CDS 2484 Fatty acid and phospholipid metabolism glycerol-3-phosphate acyltransferase b4042 dgkA 464 506 302 10 -223 - - CDS 369 Fatty acid and phospholipid metabolism diacylglycerol kinase b4044 dinF -931 -393 -422 -615 -259 - - CDS 1380 "Hypothetical, unclassified, unknown" DNA-damage-inducible protein F b4045 yjbJ 1344 1928 3103 1955 2856 - - CDS 210 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4046 yjbK 236 118 35 128 -52 - - CDS 576 Putative transport proteins putative regulator b4047 yjbL -522 -268 -334 -320 -192 - - CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4048 yjbM -286 -218 -241 -210 -137 - - CDS 708 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4049 yjbN 385 403 477 472 108 - - CDS 1038 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4050 yjbO -230 180 291 379 38 - - CDS 453 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4051 qor 725 1282 2101 1656 1542 - - CDS 984 Energy metabolism quinone oxidoreductase b4052 dnaB 27 320 230 154 -24 - - CDS 1416 "DNA replication, recombination, modification and repair" replicative DNA helicase; part of primosome b4053 alr 356 977 715 846 675 - - CDS 1080 Amino acid biosynthesis and metabolism alanine racemase 1 b4054 tyrB 1283 1020 773 1159 178 - - CDS 1194 Amino acid biosynthesis and metabolism "tyrosine aminotransferase, tyrosine repressible" b4058 uvrA 496 664 506 568 63 - - CDS 2823 "DNA replication, recombination, modification and repair" excision nuclease subunit A b4060 yjcB -224 -199 -276 -295 -132 - - CDS 351 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4061 yjcC -679 -341 -417 -462 -308 - - CDS 1587 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4062 soxS 1052 29 47 -212 -126 - - CDS 324 Regulatory function regulation of superoxide response regulon b4063 soxR -726 -347 -498 -524 -367 - - CDS 465 Regulatory function redox-sensing activator of soxS b4064 yjcD 268 173 38 96 -151 - - CDS 1350 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4065 yjcE 1045 691 456 150 -101 - - CDS 1650 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4066 yjcF -515 -284 -337 -331 -236 - - CDS 1293 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4067 yjcG 599 818 960 319 596 - - CDS 1650 "Hypothetical, unclassified, unknown" putative transport protein b4068 yjcH -448 -222 -337 -357 -198 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4069 acs 203 39 -88 -303 -214 - - CDS 1959 Fatty acid and phospholipid metabolism acetyl-CoA synthetase b4070 nrfA 85 171 12 -61 15 - - CDS 1437 Energy metabolism periplasmic cytochrome c(552): plays a role in nitrite reduction b4071 nrfB -419 -183 -317 -328 -254 - - CDS 573 Energy metabolism formate-dependent nitrite reductase; a penta-haeme cytochrome c b4072 nrfC -238 -144 -248 -231 -295 - - CDS 672 Energy metabolism formate-dependent nitrite reductase; Fe-S centers b4073 nrfD 1462 959 906 765 228 - - CDS 957 Energy metabolism formate-dependent nitrate reductase complex; transmembrane protein b4074 nrfE -592 -290 -391 -454 -321 - - CDS 1659 Energy metabolism formate-dependent nitrite reductase; possible assembly function b4075 nrfF -109 101 -60 23 -43 - - CDS 384 Energy metabolism part of formate-dependent nitrite reductase complex b4076 nrfG -199 -18 12 -57 -27 - - CDS 597 Energy metabolism part of formate-dependent nitrite reductase complex b4077 gltP 25 531 384 -59 -218 - - CDS 1314 Transport and binding proteins glutamate-aspartate symport protein b4078 yjcO -412 -53 -78 -290 -118 - - CDS 690 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4079 fdhF 286 265 174 224 -152 - - CDS 2148 Energy metabolism selenopolypeptide subunit of formate dehydrogenase H b4080 yjcP -1039 -470 -658 -543 -393 - - CDS 1467 Putative enzymes putative enzyme b4081 yjcQ 303 283 327 575 496 - - CDS 1911 Putative enzymes putative enzyme b4082 yjcR -423 -152 -179 -238 -171 - - CDS 1032 "Cell processes (incl. adaptation, protection)" putative membrane protein b4083 yjcS 454 237 458 512 222 - - CDS 1998 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4084 yjcT -440 -196 -295 -207 -165 - - CDS 930 "Cell processes (incl. adaptation, protection)" putative NAGC-like transcriptional regulator b4085 yjcU -482 -245 -281 -10 -151 - - CDS 696 Energy metabolism putative epimerase b4086 yjcV -42 -75 62 -51 15 - - CDS 981 Putative transport proteins putative transport system permease protein b4087 yjcW 314 263 316 241 86 - - CDS 1533 Putative transport proteins putative ATP-binding component of a transport system b4088 yjcX 264 170 270 316 84 - - CDS 936 Putative transport proteins putative LACI-type transcriptional regulator b4089 rpiR -1159 -811 -766 -1171 -809 - - CDS 924 Energy metabolism transcriptional repressor of rpiB expression b4090 rpiB 210 236 80 155 -18 - - CDS 450 Carbon compound catabolism ribose 5-phosphate isomerase B b4091 phnQ -409 -178 -289 -311 -184 - - CDS 408 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4092 phnP -620 -243 -365 -480 -283 - - CDS 759 Central intermediary metabolism phosphonate metabolism b4093 phnO 216 290 135 7 -32 - - CDS 435 Central intermediary metabolism "putative regulator, phn operon" b4094 phnN 1385 713 572 611 178 - - CDS 558 Central intermediary metabolism ATP-binding component of phosphonate transport b4095 phnM -809 -405 -340 -547 -220 - - CDS 1137 Central intermediary metabolism phosphonate metabolism b4096 phnL 253 182 236 248 50 - - CDS 681 Central intermediary metabolism ATP-binding component of phosphonate transport b4097 phnK -557 -427 -294 -396 -283 - - CDS 759 Central intermediary metabolism ATP-binding component of phosphonate transport b4098 phnJ 2254 1332 1800 1531 1136 - - CDS 846 Central intermediary metabolism phosphonate metabolism b4099 phnI -1132 -587 -518 -736 -439 - - CDS 1065 Central intermediary metabolism phosphonate metabolism b4100 phnH -573 -384 -335 -469 -389 - - CDS 585 Central intermediary metabolism phosphonate metabolism b4101 phnG -441 -268 -284 -418 -342 - - CDS 453 Central intermediary metabolism phosphonate metabolism b4102 phnF -280 43 -40 -34 -16 - - CDS 726 Central intermediary metabolism putative transcriptional regulator b4103 - -464 -286 -364 -306 -253 - - CDS 222 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4104 phnE 1166 617 551 495 265 - - CDS 621 Transport and binding proteins membrane channel protein component of Pn transporter b4105 phnD 1105 490 516 596 197 - - CDS 1017 Transport and binding proteins periplasmic binding protein component of Pn transporter b4106 phnC -360 -136 -194 -206 -134 - - CDS 789 Transport and binding proteins ATP-binding component of phosphonate transport b4107 phnB -166 -12 -21 -124 -194 - - CDS 444 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4109 yjdA -366 -270 -355 -422 -273 - - CDS 2229 Structural proteins putative vimentin b4110 yjcZ -171 -98 -87 145 95 - - CDS 846 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4112 basS 486 304 300 13 -233 - - CDS 1092 "Transcription, RNA processing and degradation" sensor protein for basR b4113 basR 235 12 -210 -581 -276 - - CDS 669 "Transcription, RNA processing and degradation" "transcriptional regulatory protein, member of 2-component regulatory system," b4114 yjdB 489 304 214 222 -52 - - CDS 1674 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4115 yjdE -294 59 -21 -111 -124 - - CDS 1338 Putative transport proteins "putative amino acid/amine transport protein, cryptic" b4116 adiY 482 620 355 392 62 - - CDS 762 Putative regulatory proteins putative ARAC-type regulatory protein b4117 adiA -895 -402 -439 -495 -222 - - CDS 2271 Amino acid biosynthesis and metabolism biodegradative arginine decarboxylase b4118 melR -516 -233 -337 -289 -186 - - CDS 909 Carbon compound catabolism regulator of melibiose operon b4121 yjdF -119 -41 -8 -215 -121 - - CDS 630 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4122 fumB -830 -603 -662 -564 -412 - - CDS 1647 Energy metabolism fumarase B= fumarate hydratase Class I; anaerobic isozyme b4123 dcuB -991 -528 -568 -802 -363 - - CDS 1341 Transport and binding proteins anaerobic dicarboxylate transport b4124 yjdG -91 110 16 36 -114 - - CDS 720 Putative regulatory proteins putative 2-component transcriptional regulator b4125 yjdH -230 30 -160 -73 -106 - - CDS 1632 Putative regulatory proteins putative 2-component sensor protein b4128 yjdK -440 -238 -315 -284 -180 - - CDS 297 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4130 yjdL 1505 447 1085 482 -113 - - CDS 1458 Putative transport proteins putative peptide transporter b4133 cadC -452 -220 -304 -247 -167 - - CDS 1539 Amino acid biosynthesis and metabolism transcriptional activator of cad operon b4136 dsbD 930 355 402 463 -69 - - CDS 1698 Central intermediary metabolism thiol:disulfide interchange protein; copper tolerance b4137 cutA 894 748 586 440 -4 - - CDS 339 "Cell processes (incl. adaptation, protection)" divalent cation tolerance protein; cytochrome c biogenesis b4140 - 62 294 304 2 -124 - - CDS 378 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4141 yjeH -60 88 -10 -126 -94 - - CDS 1257 Putative transport proteins putative transport b4145 yjeJ -296 -124 -179 -196 -81 - - CDS 870 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4146 yjeK 572 641 781 301 -50 - - CDS 1029 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4148 sugE 1427 720 873 854 193 - - CDS 468 Other known genes "suppresses groEL, may be chaperone" b4150 ampC -168 -51 -104 -86 -127 - - CDS 1134 "Cell processes (incl. adaptation, protection)" beta-lactamase; penicillin resistance b4152 frdC 1195 1115 719 565 199 - - CDS 396 Energy metabolism "fumarate reductase, anaerobic, membrane anchor polypeptide" b4155 yjeA -305 -171 -179 -140 -234 - - CDS 1008 "Hypothetical, unclassified, unknown" putative lysyl-tRNA synthetase b4156 yjeM -740 -349 -509 -579 -343 - - CDS 1545 Putative transport proteins putative transport b4157 yjeN -774 -454 -572 -538 -345 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4158 yjeO -553 -233 -297 -259 -214 - - CDS 315 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4159 yjeP -196 -41 -35 -54 -5 - - CDS 3324 Structural proteins putative periplasmic binding protein b4160 psd -318 420 293 291 -266 - - CDS 969 Fatty acid and phospholipid metabolism phosphatidylserine decarboxylase; phospholipid synthesis b4161 yjeQ 225 514 515 449 32 - - CDS 1014 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4162 yjeR 260 320 414 599 135 - - CDS 615 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4166 yjeS 26 56 -146 -2 -102 - - CDS 1140 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4168 yjeE -88 100 -178 -220 -236 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4169 amiB 303 302 156 -93 -185 - - CDS 1338 Cell structure N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase b4170 mutL 723 617 365 43 -215 - - CDS 1848 "DNA replication, recombination, modification and repair" enzyme in methyl-directed mismatch repair b4176 yjeT -536 -147 -194 -295 -247 - - CDS 198 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4180 yjfH -218 50 72 -237 -369 - - CDS 732 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4181 yjfI -262 -96 -116 -126 -167 - - CDS 402 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4182 yjfJ -463 -223 -352 -319 -82 - - CDS 699 Structural proteins putative alpha helical protein b4183 yjfK 871 295 269 381 -48 - - CDS 660 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4184 yjfL 367 242 202 53 -86 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4185 yjfM -647 -259 -285 -325 -168 - - CDS 639 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4186 yjfC 183 76 238 228 -6 - - CDS 1164 Putative enzymes putative synthetase/amidase b4187 aidB -145 -154 -251 -203 -291 - - CDS 1641 "DNA replication, recombination, modification and repair" putative acyl coenzyme A dehydrogenase b4190 yjfP 97 129 -52 53 106 - - CDS 750 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4191 yjfQ -192 -81 -145 -161 -107 - - CDS 756 Putative regulatory proteins putative DEOR-type transcriptional regulator b4192 yjfR -45 130 44 294 -86 - - CDS 1071 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4193 sgaT 405 102 163 147 -102 - - CDS 1455 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4194 sgaB -897 -555 -784 -811 -523 - - CDS 306 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4195 ptxA 312 25 273 493 112 - - CDS 465 Putative transport proteins putative PTS system enzyme II A component b4196 sgaH 591 131 314 717 173 - - CDS 651 "Hypothetical, unclassified, unknown" probable hexulose-6-phosphate synthase b4197 sgaU 964 333 641 909 129 - - CDS 855 "Hypothetical, unclassified, unknown" putative hexulose-6-phosphate isomerase b4198 sgaE -1236 -590 -808 -1182 -896 - - CDS 687 Carbon compound catabolism putative epimerase/aldolase b4199 yjfY 676 225 310 346 206 - - CDS 276 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4200 rpsF 1813 2716 3654 2080 1191 - - CDS 396 "Translation, post-translational modification" 30S ribosomal subunit protein S6 b4204 yjfZ -604 -328 -380 -376 -236 - - CDS 795 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4205 ytfA -567 -316 -368 -398 -251 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4208 cycA 422 299 301 114 46 - - CDS 1413 Transport and binding proteins "transport of D-alanine, D-serine, and glycine" b4209 ytfE 1437 612 897 760 179 - - CDS 663 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4210 ytfF 303 277 217 90 -43 - - CDS 975 "Hypothetical, unclassified, unknown" putative transmembrane subunit b4211 ytfG 279 160 202 113 -105 - - CDS 861 "Hypothetical, unclassified, unknown" putative oxidoreductase b4212 ytfH -230 89 182 -251 -44 - - CDS 471 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4215 ytfI -224 -109 -174 -235 -196 - - CDS 501 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4218 ytfL 392 -118 250 -56 -268 - - CDS 1344 Putative enzymes putative transport protein b4219 msrA 1682 756 415 236 -183 - - CDS 639 "Translation, post-translational modification" peptide methionine sulfoxide reductase b4220 ytfM 812 544 471 404 141 - - CDS 1734 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4223 yjfA -266 -125 -48 -109 -122 - - CDS 270 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4224 chpS 739 133 219 261 5 - - CDS 258 Other known genes "suppressor of inhibitory function of ChpB, PemI-like, autoregulated" b4225 chpB 1223 442 319 120 -132 - - CDS 351 Other known genes "probable growth inhibitor, PemK-like, autoregulated" b4227 ytfQ 635 385 273 85 11 - - CDS 957 Putative transport proteins putative LACI-type transcriptional regulator b4228 ytfR -588 -236 -328 -372 -313 - - CDS 1254 Putative transport proteins putative ATP-binding component of a transport system b4229 ytfS -444 -266 -350 -249 -256 - - CDS 273 Putative transport proteins putative ATP-binding component of a transport system b4230 ytfT -25 -12 57 24 94 - - CDS 1026 Putative transport proteins putative transport system permease protein b4231 yjfF -636 -363 -360 -429 -280 - - CDS 972 Putative transport proteins putative transport system permease protein b4232 fbp 542 277 667 288 91 - - CDS 999 Central intermediary metabolism fructose-bisphosphatase b4233 yjfG 1166 495 971 753 341 - - CDS 1374 Cell structure putative ligase b4235 pmbA 390 522 580 344 23 - - CDS 1353 "Translation, post-translational modification" "maturation of antibiotic MccB17, see tld genes" b4236 cybC 15 168 145 -30 -195 - - CDS 303 Energy metabolism cytochrome b(562) b4237 nrdG -422 -15 -58 206 14 - - CDS 465 Central intermediary metabolism anaerobic ribonucleotide reductase activating protein b4238 nrdD 273 692 553 961 1 - - CDS 2139 Nucleotide biosynthesis and metabolism anaerobic ribonucleoside-triphosphate reductase b4241 treR -326 -215 -299 -223 -223 - - CDS 948 "Cell processes (incl. adaptation, protection)" "repressor of treA,B,C" b4242 mgtA 129 115 4 -31 -50 - - CDS 2697 Transport and binding proteins "Mg2+ transport ATPase, P-type 1" b4244 pyrI 629 343 283 260 90 - - CDS 462 Nucleotide biosynthesis and metabolism "aspartate carbamoyltransferase, regulatory subunit" b4245 pyrB 568 314 189 333 8 - - CDS 936 Nucleotide biosynthesis and metabolism "aspartate carbamoyltransferase, catalytic subunit" b4246 pyrL -395 -239 -163 -323 -240 - - CDS 135 Nucleotide biosynthesis and metabolism pyrBI operon leader peptide b4247 yjgG -371 -213 -299 -263 -185 - - CDS 333 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4248 yjgH 201 90 58 -27 -107 - - CDS 396 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4249 yjgI -1014 -710 -724 -607 -548 - - CDS 714 Fatty acid and phospholipid metabolism putative oxidoreductase b4250 - -278 -116 -195 -205 -170 - - CDS 165 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4251 yjgJ -628 -316 -413 -534 -301 - - CDS 255 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4252 yjgK 452 233 330 239 103 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4253 yjgL -521 -261 -309 -330 -203 - - CDS 1851 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4254 argI -156 -85 -205 -77 -50 - - CDS 1005 Amino acid biosynthesis and metabolism ornithine carbamoyltransferase 1 b4256 - 709 374 392 268 20 - - CDS 294 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4257 yjgN -365 -159 -250 -229 -85 - - CDS 1182 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4260 pepA 1752 1111 814 306 -117 - - CDS 1512 "Translation, post-translational modification" aminopeptidase A/I b4261 yjgP 650 435 428 216 -45 - - CDS 1101 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4262 yjgQ -475 50 -233 -280 -187 - - CDS 1086 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4263 yjgR 1364 548 472 382 -43 - - CDS 1503 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4264 idnR -644 -247 -385 -388 -185 - - CDS 999 Putative regulatory proteins L-idonate transcriptional regulator b4265 idnT -235 61 -17 21 -107 - - CDS 1320 Carbon compound catabolism L-idonate transporter b4266 idnO -261 -141 -150 -112 -19 - - CDS 765 Putative enzymes 5-keto-D-gluconate 5-reductase b4267 idnD 1044 392 743 939 467 - - CDS 1032 Putative enzymes L-idonate dehydrogenase b4268 idnK -422 -258 -265 -189 -154 - - CDS 564 Carbon compound catabolism "gluconate kinase, thermosensitive glucokinase" b4269 yjgB 266 15 198 147 114 - - CDS 1062 Putative enzymes putative oxidoreductase b4271 intB -346 -198 70 -209 37 - - CDS 1191 "phage, transposon, or plasmid" prophage P4 integrase b4272 yi21_6 1239 171 504 317 -8 - - CDS 411 IS2 hypothetical protein b4274 yjgW -256 -15 -37 64 112 - - CDS 336 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4275 yjgX -18 116 104 -27 20 - - CDS 447 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4276 yjgY -371 -184 -245 -394 -273 - - CDS 450 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4277 yjgZ 339 425 332 374 275 - - CDS 330 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4278 yi41 -269 -13 -217 -140 -7 - - CDS 1329 "Hypothetical, unclassified, unknown" IS4 hypothetical protein b4279 yjhB -170 -116 -268 -258 -145 - - CDS 1278 "Hypothetical, unclassified, unknown" putative transport protein b4281 yjhD -243 -83 -130 -91 -157 - - CDS 375 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4282 yjhE -474 -196 -282 -258 -174 - - CDS 204 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4283 yi91b -163 -9 -41 -64 -108 - - CDS 303 "Hypothetical, unclassified, unknown" IS911 hypothetical protein (IS911B) b4284 tra8_3 -32 102 -15 62 -124 - - CDS 1152 IS30 transposase b4285 - -382 -140 -235 -281 -136 - - CDS 597 "phage, transposon, or plasmid" putative transposase b4286 - -533 -271 -355 -377 -317 - - CDS 414 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4287 fecE -571 -331 -366 -510 -295 - - CDS 768 Transport and binding proteins ATP-binding component of citrate-dependent iron(III) transport protein b4288 fecD 588 547 430 560 77 - - CDS 957 Transport and binding proteins "citrate-dependent iron transport, membrane-bound protein" b4289 fecC -10 64 -11 -84 -29 - - CDS 999 Transport and binding proteins "citrate-dependent iron(III) transport protein, cytosolic" b4290 fecB -273 -207 -249 -187 -198 - - CDS 909 Transport and binding proteins "citrate-dependent iron transport, periplasmic protein" b4291 fecA 43 121 75 -102 -103 - - CDS 2325 Transport and binding proteins "outer membrane receptor; citrate-dependent iron transport, outer membrane receptor" b4292 fecR -489 -373 -384 -361 -295 - - CDS 954 Transport and binding proteins "regulator for fec operon, periplasmic" b4293 fecI -166 -89 -69 -96 -78 - - CDS 522 Transport and binding proteins probable RNA polymerase sigma factor b4294 insA_7 1636 1052 1019 850 565 - - CDS 276 "phage, transposon, or plasmid" IS1 protein InsA b4295 yjhU 708 372 195 -6 -257 - - CDS 801 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4296 yjhF -12 119 -7 7 81 - - CDS 1350 Carbon compound catabolism putative transport system permease b4297 yjhG -332 -116 -192 -237 -240 - - CDS 1968 Putative enzymes putative dehydratase b4298 yjhH 186 196 90 75 -67 - - CDS 960 "Hypothetical, unclassified, unknown" putative lyase/synthase b4299 yjhI -314 -274 -92 -299 -268 - - CDS 789 Putative regulatory proteins putative regulator b4300 sgcR -454 -226 -361 -272 -187 - - CDS 783 Putative regulatory proteins putative DEOR-type transcriptional regulator b4301 sgcE -669 -361 -311 -439 -279 - - CDS 633 "Hypothetical, unclassified, unknown" putative epimerase b4302 sgcA 260 71 90 -16 -167 - - CDS 432 "Hypothetical, unclassified, unknown" putative PTS system enzyme II A component b4303 sgcQ -325 -302 -324 -364 -226 - - CDS 807 Putative enzymes putative nucleoside triphosphatase b4304 sgcC 584 399 327 543 103 - - CDS 1314 Transport and binding proteins putative PTS system enzyme IIC component b4305 sgcX -340 -121 -144 -217 -124 - - CDS 1152 "Hypothetical, unclassified, unknown" putative lyase/synthase b4306 yjhP 25 36 12 147 -29 - - CDS 747 Putative enzymes putative methyltransferase b4307 yjhQ -829 -460 -528 -549 -441 - - CDS 546 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4308 yjhR -28 -60 256 407 195 - - CDS 1017 Putative enzymes putative frameshift suppressor b4309 yjhS -651 -262 -295 -408 -184 - - CDS 981 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4310 yjhT 1084 360 719 693 340 - - CDS 1215 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4311 yjhA 1148 365 569 251 -24 - - CDS 726 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4312 fimB -355 -194 -210 -195 30 - - CDS 603 Cell structure recombinase involved in phase variation; regulator for fimA b4313 fimE 1759 1042 1434 1712 1009 - - CDS 597 Cell structure recombinase involved in phase variation; regulator for fimA b4314 fimA 1291 1671 1566 1791 1013 - - CDS 549 Cell structure major type 1 subunit fimbrin (pilin) b4315 fimI -672 -142 -281 -218 -115 - - CDS 648 Cell structure fimbrial protein b4316 fimC 168 207 123 349 61 - - CDS 726 Cell structure "periplasmic chaperone, required for type 1 fimbriae" b4317 fimD -1157 -375 -511 -739 -248 - - CDS 2637 Cell structure "outer membrane protein; export and assembly of type 1 fimbriae, interrupted" b4318 fimF -296 -182 -230 -258 -217 - - CDS 531 Cell structure fimbrial morphology b4319 fimG -1050 -461 -682 -779 -447 - - CDS 504 Cell structure fimbrial morphology b4320 fimH -359 -237 -251 -193 -228 - - CDS 903 Cell structure "minor fimbrial subunit, D-mannose specific adhesin" b4321 gntP -308 -110 -121 -492 -322 - - CDS 1344 Transport and binding proteins gluconate transport system permease 3 b4322 uxuA 1635 939 800 184 56 - - CDS 1185 Carbon compound catabolism mannonate hydrolase b4323 uxuB 825 582 440 287 -17 - - CDS 1461 Carbon compound catabolism D-mannonate oxidoreductase b4324 uxuR -333 -141 -317 -485 -339 - - CDS 774 Carbon compound catabolism regulator for uxu operon b4325 yjiC -407 -209 -257 -253 -162 - - CDS 831 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4326 yjiD -437 -251 -266 -295 -172 - - CDS 402 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4327 yjiE -282 -110 -271 -264 -171 - - CDS 912 Putative regulatory proteins putative transcriptional regulator LYSR-type b4328 iadA -613 -194 -306 -315 -281 - - CDS 1173 "Translation, post-translational modification" isoaspartyl dipeptidase b4329 yjiG -152 5 -61 -223 -181 - - CDS 462 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4330 yjiH 45 -48 -29 -9 -60 - - CDS 696 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4331 yjiI 210 227 158 -115 -59 - - CDS 657 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4332 yjiJ -176 -23 -111 -102 -148 - - CDS 1179 "Hypothetical, unclassified, unknown" putative transport protein b4333 yjiK 83 -187 -257 -227 -245 - - CDS 972 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4334 yjiL 132 289 161 -15 -93 - - CDS 774 Putative enzymes putative enzyme b4335 yjiM 1506 751 515 70 -353 - - CDS 1173 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4336 yjiN 622 114 29 -98 -251 - - CDS 1281 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4337 yjiO 547 430 280 321 121 - - CDS 1233 Putative transport proteins putative transport protein b4338 yjiP -481 -155 -294 -368 -173 - - CDS 312 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4339 yjiQ -65 40 -25 -61 -76 - - CDS 561 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4340 yjiR -271 -83 -81 -111 -102 - - CDS 1413 Putative regulatory proteins putative regulator b4341 yjiS -231 -14 -109 -144 -134 - - CDS 165 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4342 yjiT 273 334 396 635 -21 - - CDS 1566 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4343 yjiU -145 -153 81 70 -40 - - CDS 1542 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4344 mcrD -111 -32 47 118 97 - - CDS 1263 "Transcription, RNA processing and degradation" inhibits McrE 5-methylcytosine restriction system b4345 mcrC -407 -219 -274 -278 -175 - - CDS 1047 "Transcription, RNA processing and degradation" "component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted" b4346 mcrB 19 -52 71 -65 -209 - - CDS 1398 "Transcription, RNA processing and degradation" component of McrBC 5-methylcytosine restriction system b4347 yjiW -565 -264 -405 -319 -258 - - CDS 399 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4348 hsdS -491 -151 -184 -70 -169 - - CDS 1395 "DNA replication, recombination, modification and repair" specificity determinant for hsdM and hsdR b4349 hsdM 61 530 398 821 41 - - CDS 1590 "DNA replication, recombination, modification and repair" host modification; DNA methylase M b4351 mrr 629 259 -268 -189 -431 - - CDS 915 "DNA replication, recombination, modification and repair" restriction of methylated adenine b4355 tsr -179 -251 -387 -216 -307 - - CDS 1656 "Cell processes (incl. adaptation, protection)" "methyl-accepting chemotaxis protein I, serine sensor receptor" b4356 yjiZ -95 -4 -93 -111 -142 - - CDS 1362 Putative transport proteins "putative transport protein, cryptic, orf, joins former yjiZ and yjjL" b4357 yjjM -260 -205 -274 -253 -178 - - CDS 807 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4358 yjjN 638 308 269 205 207 - - CDS 1038 Putative enzymes putative oxidoreductase b4359 mdoB -54 177 66 -43 -85 - - CDS 2253 "Cell processes (incl. adaptation, protection)" phosphoglycerol transferase I b4360 yjjA 613 397 438 233 -161 - - CDS 498 Structural proteins putative glycoprotein/receptor b4361 dnaC -7 94 6 -55 -188 - - CDS 738 "DNA replication, recombination, modification and repair" chromosome replication; initiation and chain elongation b4363 yjjB -488 -305 -337 -329 -160 - - CDS 327 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4364 yjjP 1119 655 641 547 424 - - CDS 834 Structural proteins putative structural protein b4365 yjjQ -401 -190 -266 -275 -200 - - CDS 726 Putative regulatory proteins putative regulator b4366 bglJ -734 -390 -472 -498 -306 - - CDS 678 Putative regulatory proteins 2-component transcriptional regulator b4367 fhuF -491 -250 -260 -263 -224 - - CDS 789 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4371 yjjT -277 -43 -206 -523 -716 - - CDS 1032 Putative enzymes putative enzyme b4372 holD -415 -87 -3 -551 -366 - - CDS 414 "DNA replication, recombination, modification and repair" "DNA polymerase III, psi subunit" b4373 rimI 730 407 474 222 -186 - - CDS 447 "Translation, post-translational modification" acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine b4374 yjjG -375 -88 -230 -273 -179 - - CDS 678 Putative enzymes putative phosphatase b4375 prfC -323 31 -103 -335 -347 - - CDS 1590 "Translation, post-translational modification" peptide chain release factor RF-3 b4377 yjjU 1024 1231 875 781 82 - - CDS 1074 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4378 yjjV 399 491 531 649 378 - - CDS 636 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4379 yjjW -164 191 219 591 10 - - CDS 864 Energy metabolism putative activating enzyme b4380 yjjI -150 17 -1 -113 -198 - - CDS 1551 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4381 deoC 66 -373 112 403 -14 - - CDS 780 Nucleotide biosynthesis and metabolism 2-deoxyribose-5-phosphate aldolase b4382 deoA 1062 75 794 679 376 - - CDS 1323 Nucleotide biosynthesis and metabolism thymidine phosphorylase b4385 yjjJ -540 -294 -515 -393 -617 - - CDS 1332 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4386 lplA 201 238 432 380 -13 - - CDS 1017 "Translation, post-translational modification" lipoate-protein ligase A b4387 smp 86 124 53 -37 -61 - - CDS 645 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4388 serB 719 423 538 611 140 - - CDS 969 Amino acid biosynthesis and metabolism 3-phosphoserine phosphatase b4389 sms -132 110 -240 -211 -158 - - CDS 1383 "Translation, post-translational modification" probable ATP-dependent protease b4392 slt 483 349 143 -141 -155 - - CDS 1965 Cell structure soluble lytic murein transglycosylase b4393 trpR -57 58 -54 -200 -233 - - CDS 327 Amino acid biosynthesis and metabolism regulator for trp operon and aroH; trp aporepressor b4394 yjjX 36 90 -38 -376 -329 - - CDS 522 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4395 gpmB -240 -136 -100 -359 -334 - - CDS 648 "Hypothetical, unclassified, unknown" phosphoglyceromutase 2 b4397 creA 1125 451 386 170 32 - - CDS 474 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4398 creB 113 81 -51 -27 -96 - - CDS 690 Regulatory function catabolic regulation response regulator b4399 creC -595 -364 -423 -461 -268 - - CDS 1425 Regulatory function catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon b4400 creD -424 -211 -199 -405 -169 - - CDS 1353 "phage, transposon, or plasmid" tolerance to colicin E2 b4402 yjjY -35 19 -81 -187 -215 - - CDS 141 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b4404 yifM_1 -513 -271 -340 -336 -217 - - CDS 225 "orf, conceptual translation in SwissProt is fused with b4405" b4405 yifM_2 -513 -271 -340 -336 -217 - - CDS 615 "orf, conceptual translation in SwissProt is fused with b4404" b1717 rpmI 3800 6432 7761 3824 1565 - erratic CDS 198 "Translation, post-translational modification" 50S ribosomal subunit protein A b0812 dps 5898 16628 18551 21113 18489 - inc? CDS 504 "Cell processes (incl. adaptation, protection)" "global regulator, starvation conditions" b1795 yeaQ 3846 5265 8222 3580 2056 - inc? CDS 249 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1810 - 1854 1632 4237 1497 3162 - inc? CDS 360 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1817 manX 5398 12595 24240 18062 13702 - inc? CDS 972 Transport and binding proteins "PTS enzyme IIAB, mannose-specific" b1818 manY 10434 11477 14981 23523 17937 - inc? CDS 801 Transport and binding proteins "PTS enzyme IIC, mannose-specific" b2095 gatZ 3456 -2134 12818 18284 16568 - inc? CDS 1263 Carbon compound catabolism putative tagatose 6-phosphate kinase 1 b2096 gatY 7377 3971 15845 15825 9530 - inc? CDS 861 Carbon compound catabolism tagatose-bisphosphate aldolase 1 b2215 ompC 7635 4734 11924 15198 18761 - inc? CDS 1104 Cell structure outer membrane protein 1b (Ib;c) b2597 yfiA 2892 14718 13571 14687 6103 - inc? CDS 342 "Transcription, RNA processing and degradation" putative yhbH sigma 54 modulator b2871 ygeX 2242 3570 3079 7287 2332 - inc? CDS 1197 Putative enzymes putative dehydratase b2904 gcvH 7555 10217 19738 23698 9196 - inc? CDS 390 Central intermediary metabolism "in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor" b3111 yhaP 3336 10406 9712 12268 2288 - inc? CDS 828 "Hypothetical, unclassified, unknown" putative L-serine dehydratase b3112 yhaQ 4322 15478 14086 16524 2598 - inc? CDS 423 "Hypothetical, unclassified, unknown" putative L-serine dehydratase b3113 yhaR 6252 16738 17552 20614 5692 - inc? CDS 453 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b3114 tdcE 7628 15915 13351 14860 4229 - inc? CDS 2241 "Hypothetical, unclassified, unknown" probable formate acetyltransferase 3 b3125 yhaE 5819 14735 21074 17246 9663 - inc? CDS 900 Putative enzymes putative dehydrogenase b3495 uspA 2198 16407 21440 23502 5236 - inc? CDS 435 "Cell processes (incl. adaptation, protection)" universal stress protein; broad regulatory function? b0734 cydB 15136 12874 16105 17372 8310 - stable CDS 1140 Energy metabolism cytochrome d terminal oxidase polypeptide subunit II b0953 rmf 13326 11184 14656 8173 10475 - stable CDS 168 "Translation, post-translational modification" ribosome modulation factor b0957 ompA 18977 15197 18822 17244 12533 - stable CDS 1041 Cell structure outer membrane protein 3a (II*;G;d) b1136 icdA 14255 17613 21893 22407 10593 - stable CDS 1251 Energy metabolism "isocitrate dehydrogenase, specific for NADP+" b1237 hns 5556 9277 11011 9634 3381 - stable CDS 414 "DNA replication, recombination, modification and repair" "DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator" b1426 ydcH 6513 5025 9932 3631 3525 - stable CDS 168 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b1480 rpsV 16581 11588 18640 9935 9207 - stable CDS 138 "Translation, post-translational modification" 30S ribosomal subunit protein S22 b1656 sodB 16085 16600 19983 22020 14211 - stable CDS 582 "Cell processes (incl. adaptation, protection)" "superoxide dismutase, iron" b1677 lpp 38370 27060 35218 41155 39067 - stable CDS 237 Cell structure murein lipoprotein b1779 gapA 40629 34049 39558 41884 33645 - stable CDS 996 Energy metabolism glyceraldehyde-3-phosphate dehydrogenase A b1819 manZ 10857 13372 14782 12582 5641 - stable CDS 861 Transport and binding proteins "PTS enzyme IID, mannose-specific" b1824 - 20323 12568 18667 19918 13290 - stable CDS 144 "Hypothetical, unclassified, unknown" "orf, hypothetical protein" b2092 gatC 21100 12962 29768 34684 11711 - stable CDS 1356 Transport and binding proteins PTS system galactitol-specific enzyme IIC b2705 srlD 11263 9513 10198 9256 5979 - stable CDS 780 Carbon compound catabolism glucitol (sorbitol)-6-phosphate dehydrogenase b2779 eno 34061 29717 33750 39545 28169 - stable CDS 1299 Energy metabolism enolase b2817 - 2826 1747 2189 2212 1423 - stable CDS 1344 Cell structure putative amidase b2870 ygeW 2452 2530 2064 4865 1606 - stable CDS 1092 "Hypothetical, unclassified, unknown" putative carbamoyl transferase b2911 ssrS 12540 16451 15985 10792 9702 - stable misc_RNA 183 "untranslated 6S RNA, interacts with 11S RNP, unknown function" b3236 mdh 40868 32202 37129 35504 27388 - stable CDS 939 Energy metabolism malate dehydrogenase b3339 tufA 34219 25588 26924 34427 26719 - stable CDS 1185 protein chain elongation factor EF-Tu (duplicate of tufB) b3616 tdh 5240 4947 5137 4006 3265 - stable CDS 1026 Amino acid biosynthesis and metabolism threonine dehydrogenase b3980 tufB 34219 25588 26924 34427 26719 - stable CDS 1185 protein chain elongation factor EF-Tu (duplicate of tufA) b3987 rpoB 2503 1817 1889 2349 1590 - stable CDS 4029 "Transcription, RNA processing and degradation" "RNA polymerase, beta subunit" b4000 hupA 13309 13937 15297 9287 8985 - stable CDS 273 "DNA replication, recombination, modification and repair" DNA-binding protein HU-alpha (HU-2) b4035 malK 11623 8305 12927 11943 9357 - stable CDS 1116 Transport and binding proteins ATP-binding component of transport system for maltose b4201 priB 3625 4008 4368 3681 2081 - stable CDS 315 "DNA replication, recombination, modification and repair" primosomal replication protein N b1823 cspC 9327 4632 16297 28831 16615 - stable? CDS 210 Other known genes cold shock protein b2069 yegD 2007 228 135 2284 1373 - stable? CDS 1416 Putative chaperones putative heat shock protein b2094 gatA 17333 7785 19384 21320 13530 - stable? CDS 453 Transport and binding proteins galactitol-specific enzyme IIA of phosphotransferase system b3185 rpmA 6130 2882 6323 1586 107 - stable? CDS 258 "Translation, post-translational modification" 50S ribosomal subunit protein L27 b3351 yheR 1778 776 1898 1721 1244 - stable? CDS 555 "Hypothetical, unclassified, unknown" putative NAD(P)H oxidoreductase b4119 melA 10379 5086 12688 17450 7734 - stable? CDS 1356 Carbon compound catabolism alpha-galactosidase