Cautions

Contamination of Database Sequences

Frameshifts

Weak alignments

Biased amino acid composition

see: Pre-filters

This document is intended to serve as a guide to using certain bioinformatics programs. It cannot be guaranteed to be free of errors or completely up-to-date. If you know of errors or other shortcomings of this document, please mail them to Keith Robison
KRobison@nucleus.harvard.edu