genewarp version 1.0 (20000814-14:21:15) executing with following parameters on Fri Sep 08 14:00:23 2000: -D (write algorithm data?): data value = on (default value) -a (algorithm): data value = 2 (default value) -d (output data file): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLB2.cdc15.elu.genewarp.data -i1 (input file name 1): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLB2.cdc15.txt -i2 (input file name 2): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLB2.elu.txt -np (max number optimal paths): data value = 10 (default value) -o (output file name): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLB2.cdc15.elu.genewarp.txt -p (parameter file name): data value = BatchAlign.temp.parms.txt Algorithm will employ the average of right and left endpoint distances due to "-a" parameter setting of 2. Alignment score of input data series = 1017.87. Optimal paths found by dynamic programming: Optimum path 1: ((0,0),(1,0),(1,1),(1,2),(1,3),(1,4),(2,4),(3,5),(3,6),(3,7),(4,7),(5,7),(6,7),(6,8),(6,9),(6,10),(6,11),(6,12),(7,12),(8,12),(8,13),(9,13),(10,13),(11,13),(12,13),(13,13),(14,13),(15,13),(16,13),(17,13),(18,13),(19,13),(20,13),(21,13),(22,13),(23,13)) Algorithm data written to file d:\JohnAa~1\timewarp\article-200007\warpruns\CLB2.cdc15.elu.genewarp.data. This file may be passed to grphwarp to generate graphical output. Processing complete.