genewarp version 1.0 (20000814-14:21:15) executing with following parameters on Fri Sep 08 14:00:21 2000: -D (write algorithm data?): data value = on (default value) -a (algorithm): data value = 2 (default value) -d (output data file): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLN2.alpha.elu.genewarp.data -i1 (input file name 1): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLN2.alpha.txt -i2 (input file name 2): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLN2.elu.txt -np (max number optimal paths): data value = 10 (default value) -o (output file name): data value = d:\JohnAa~1\timewarp\article-200007\warpruns\CLN2.alpha.elu.genewarp.txt -p (parameter file name): data value = BatchAlign.temp.parms.txt Algorithm will employ the average of right and left endpoint distances due to "-a" parameter setting of 2. Alignment score of input data series = 450.677. Optimal paths found by dynamic programming: Optimum path 1: ((0,0),(0,1),(1,2),(1,3),(2,4),(3,4),(4,4),(4,5),(4,6),(4,7),(5,8),(5,9),(5,10),(6,11),(7,11),(8,11),(9,11),(10,11),(11,11),(12,11),(13,11),(14,11),(15,11),(15,12),(15,13),(16,13),(17,13)) Algorithm data written to file d:\JohnAa~1\timewarp\article-200007\warpruns\CLN2.alpha.elu.genewarp.data. This file may be passed to grphwarp to generate graphical output. Processing complete.