Negative Controls
- 250 AlignACE runs on 50 groups each of 20, 40, 60, 80,and 100 orfs, resulting in 3692 motifs.
- Allows calibration of an expected false positive rate for a set of hypotheses resulting from any chosen cutoffs.
Computational identification of cis-regulatory elements associated with groups of functionally related genes in S. cerevisiae Hughes, et al JMB, 1999.